Name QDfLDm5N6bzn7Olcko1bjSoqABFKDmABFKDmumdXDmSwGKDmrM6V5n_0
Workunit 2121590
Created 22 Aug 2021, 17:24:36 UTC
Sent 22 Aug 2021, 17:24:46 UTC
Report deadline 29 Aug 2021, 17:24:46 UTC
Received 22 Aug 2021, 17:32:09 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4463
Run time 6 min 18 sec
CPU time 2 min 40 sec
Validate state Valid
Credit 39.89
Device peak FLOPS 45.56 GFLOPS
Application version ATLAS Simulation v1.04 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 2.61 GB
Peak swap size 4.92 GB
Peak disk usage 78.58 MB

Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
13:24:56 (1163118): wrapper (7.7.26015): starting
13:24:56 (1163118): wrapper: running run_atlas (--nthreads 8)
[2021-08-22 13:24:56] Arguments: --nthreads 8
[2021-08-22 13:24:56] Threads: 8
[2021-08-22 13:24:56] Checking for CVMFS
[2021-08-22 13:24:56] Probing /cvmfs/atlas.cern.ch... OK
[2021-08-22 13:24:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2021-08-22 13:24:56] Running cvmfs_config stat atlas.cern.ch
[2021-08-22 13:24:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2021-08-22 13:24:56] 2.9.0.0 3871833 895 135328 90740 2 1 3909452 6144001 0 130560 0 214763 99.982 5467 1071 http://s1fnal-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.100:3128 1
[2021-08-22 13:24:56] CVMFS is ok
[2021-08-22 13:24:56] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2021-08-22 13:24:56] Checking for singularity binary...
[2021-08-22 13:24:56] Using singularity found in PATH at /usr/local/bin/singularity
[2021-08-22 13:24:56] Running /usr/local/bin/singularity --version
[2021-08-22 13:24:56] singularity version 3.8.1
[2021-08-22 13:24:56] Checking singularity works with /usr/local/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2021-08-22 13:24:57] WARNING: While bind mounting '/cvmfs:/cvmfs': destination is already in the mount point list MORIA
[2021-08-22 13:24:57] Singularity works
[2021-08-22 13:24:57] Set ATHENA_PROC_NUMBER=8
[2021-08-22 13:24:57] Starting ATLAS job with PandaID=5162421709
[2021-08-22 13:24:57] Running command: /usr/local/bin/singularity exec --pwd /var/lib/boinc-client/slots/17 -B /cvmfs,/var /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2021-08-22 13:31:11]  *** The last 200 lines of the pilot log: ***
[2021-08-22 13:31:11]         "cpuTime": 0.13, 
[2021-08-22 13:31:11]         "wallTime": 3.31
[2021-08-22 13:31:11]       }, 
[2021-08-22 13:31:11]       "transformSetup": {
[2021-08-22 13:31:11]         "cpuTime": 0.0, 
[2021-08-22 13:31:11]         "wallTime": 0.02
[2021-08-22 13:31:11]       }, 
[2021-08-22 13:31:11]       "trfPredata": null, 
[2021-08-22 13:31:11]       "wallTime": 276.18
[2021-08-22 13:31:11]     }
[2021-08-22 13:31:11]   }
[2021-08-22 13:31:11] }
[2021-08-22 13:31:11] 2021-08-22 17:30:45,633 | DEBUG    | pilot.user.atlas.common          | update_server             | no need to update logstash for this job
[2021-08-22 13:31:11] 2021-08-22 17:30:45,634 | INFO     | pilot.control.job                | send_state                | pilot will not update the server (heartbeat message will be written to file)
[2021-08-22 13:31:11] 2021-08-22 17:30:45,634 | INFO     | pilot.control.job                | send_state                | job 5162421709 has finished - writing final server update
[2021-08-22 13:31:11] 2021-08-22 17:30:45,634 | DEBUG    | pilot.user.atlas.jobmetrics      | get_job_metrics_string    | job definition core count: 8
[2021-08-22 13:31:11] 2021-08-22 17:30:45,634 | INFO     | pilot.user.atlas.jobmetrics      | get_job_metrics_string    | will not add max space = -36805278 B to job metrics
[2021-08-22 13:31:11] 2021-08-22 17:30:45,634 | WARNING  | pilot.api.analytics              | get_fitted_data           | wrong length of table data, x=[1629653145.0, 1629653206.0, 1629653267.0, 1629653328.0, 1629653389.0]
[2021-08-22 13:31:11] 2021-08-22 17:30:45,635 | DEBUG    | pilot.user.atlas.jobmetrics      | get_job_metrics           | job metrics="actualCoreCount=5 nEvents=2 dbTime=36.4 dbData=4274899 eventnumber=17002"
[2021-08-22 13:31:11] 2021-08-22 17:30:45,635 | INFO     | pilot.control.job                | get_data_structure        | mean actualcorecount: 4.750000
[2021-08-22 13:31:11] 2021-08-22 17:30:45,635 | INFO     | pilot.control.job                | get_data_structure        | total number of processed events: 2 (read)
[2021-08-22 13:31:11] 2021-08-22 17:30:45,659 | INFO     | pilot.util.container             | execute                   | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2021-08-22 13:31:11] 2021-08-22 17:30:45,728 | INFO     | pilot.user.atlas.utilities       | get_memory_values         | using path: /var/lib/boinc-client/slots/17/PanDA_Pilot-5162421709/memory_monitor_summary.json (trf n
[2021-08-22 13:31:11] 2021-08-22 17:30:45,730 | DEBUG    | pilot.user.atlas.utilities       | get_memory_monitor_info   | summary_dictionary={'Avg': {'nprocs': 4.799, 'nthreads': 5.4, 'pss': 1159036.0, 'rchar': 2004597.0, 
[2021-08-22 13:31:11] 2021-08-22 17:30:45,730 | INFO     | pilot.user.atlas.utilities       | get_memory_monitor_info   | extracted standard info from prmon json
[2021-08-22 13:31:11] 2021-08-22 17:30:45,730 | INFO     | pilot.user.atlas.utilities       | get_memory_monitor_info   | extracted standard memory fields from prmon json
[2021-08-22 13:31:11] 2021-08-22 17:30:45,730 | INFO     | pilot.util.timing                | timing_report             | ..............................
[2021-08-22 13:31:11] 2021-08-22 17:30:45,730 | INFO     | pilot.util.timing                | timing_report             | . Timing measurements:
[2021-08-22 13:31:11] 2021-08-22 17:30:45,730 | INFO     | pilot.util.timing                | timing_report             | . get job = 0 s
[2021-08-22 13:31:11] 2021-08-22 17:30:45,730 | INFO     | pilot.util.timing                | timing_report             | . initial setup = 0 s
[2021-08-22 13:31:11] 2021-08-22 17:30:45,730 | INFO     | pilot.util.timing                | timing_report             | . payload setup = 9 s
[2021-08-22 13:31:11] 2021-08-22 17:30:45,730 | INFO     | pilot.util.timing                | timing_report             | . total setup = 9 s
[2021-08-22 13:31:11] 2021-08-22 17:30:45,730 | INFO     | pilot.util.timing                | timing_report             | . stage-in = 0 s
[2021-08-22 13:31:11] 2021-08-22 17:30:45,730 | INFO     | pilot.util.timing                | timing_report             | . payload execution = 301 s
[2021-08-22 13:31:11] 2021-08-22 17:30:45,731 | INFO     | pilot.util.timing                | timing_report             | . stage-out = 0 s
[2021-08-22 13:31:11] 2021-08-22 17:30:45,731 | INFO     | pilot.util.timing                | timing_report             | ..............................
[2021-08-22 13:31:11] 2021-08-22 17:30:45,731 | DEBUG    | pilot.control.job                | send_state                | is_harvester_mode(args) : False
[2021-08-22 13:31:11] 2021-08-22 17:30:45,731 | DEBUG    | pilot.control.job                | write_heartbeat_to_file   | heartbeat dictionary: {'jobId': '5162421709', 'state': 'finished', 'timestamp': '2021-08-22T13:30:45
[2021-08-22 13:31:11] 2021-08-22 17:30:45,731 | DEBUG    | pilot.control.job                | write_heartbeat_to_file   | wrote heartbeat to file /var/lib/boinc-client/slots/17/heartbeat.json
[2021-08-22 13:31:11] 2021-08-22 17:30:45,732 | DEBUG    | pilot.control.job                | queue_monitor             | job 5162421709 was dequeued from the monitored payloads queue
[2021-08-22 13:31:11] 2021-08-22 17:30:45,806 | DEBUG    | pilot.control.job                | queue_monitor             | tmp job object deleted
[2021-08-22 13:31:11] 2021-08-22 17:30:45,806 | INFO     | pilot.control.job                | make_job_report           | 
[2021-08-22 13:31:11] 2021-08-22 17:30:45,806 | INFO     | pilot.control.job                | make_job_report           | job summary report
[2021-08-22 13:31:11] 2021-08-22 17:30:45,807 | INFO     | pilot.control.job                | make_job_report           | --------------------------------------------------
[2021-08-22 13:31:11] 2021-08-22 17:30:45,807 | INFO     | pilot.control.job                | make_job_report           | PanDA job id: 5162421709
[2021-08-22 13:31:11] 2021-08-22 17:30:45,807 | INFO     | pilot.control.job                | make_job_report           | task id: NULL
[2021-08-22 13:31:11] 2021-08-22 17:30:45,807 | INFO     | pilot.control.job                | make_job_report           | errors: (none)
[2021-08-22 13:31:11] 2021-08-22 17:30:45,807 | INFO     | pilot.control.job                | make_job_report           | status: LOG_TRANSFER = DONE 
[2021-08-22 13:31:11] 2021-08-22 17:30:45,807 | INFO     | pilot.control.job                | make_job_report           | pilot state: finished 
[2021-08-22 13:31:11] 2021-08-22 17:30:45,807 | INFO     | pilot.control.job                | make_job_report           | transexitcode: 0
[2021-08-22 13:31:11] 2021-08-22 17:30:45,807 | INFO     | pilot.control.job                | make_job_report           | exeerrorcode: 0
[2021-08-22 13:31:11] 2021-08-22 17:30:45,807 | INFO     | pilot.control.job                | make_job_report           | exeerrordiag: 
[2021-08-22 13:31:11] 2021-08-22 17:30:45,807 | INFO     | pilot.control.job                | make_job_report           | exitcode: 0
[2021-08-22 13:31:11] 2021-08-22 17:30:45,807 | INFO     | pilot.control.job                | make_job_report           | exitmsg: OK
[2021-08-22 13:31:11] 2021-08-22 17:30:45,807 | INFO     | pilot.control.job                | make_job_report           | cpuconsumptiontime: 171 s
[2021-08-22 13:31:11] 2021-08-22 17:30:45,807 | INFO     | pilot.control.job                | make_job_report           | nevents: 2
[2021-08-22 13:31:11] 2021-08-22 17:30:45,808 | INFO     | pilot.control.job                | make_job_report           | neventsw: 0
[2021-08-22 13:31:11] 2021-08-22 17:30:45,808 | INFO     | pilot.control.job                | make_job_report           | pid: 1172970
[2021-08-22 13:31:11] 2021-08-22 17:30:45,808 | INFO     | pilot.control.job                | make_job_report           | pgrp: 1172970
[2021-08-22 13:31:11] 2021-08-22 17:30:45,808 | INFO     | pilot.control.job                | make_job_report           | corecount: 8
[2021-08-22 13:31:11] 2021-08-22 17:30:45,808 | INFO     | pilot.control.job                | make_job_report           | event service: False
[2021-08-22 13:31:11] 2021-08-22 17:30:45,808 | INFO     | pilot.control.job                | make_job_report           | sizes: {17341309: 3887981, 17341310: 3889481, 17341321: 3889367, 17341632: 3911479, 17341634: 392094
[2021-08-22 13:31:11] 2021-08-22 17:30:45,808 | INFO     | pilot.control.job                | make_job_report           | --------------------------------------------------
[2021-08-22 13:31:11] 2021-08-22 17:30:45,808 | INFO     | pilot.control.job                | make_job_report           | 
[2021-08-22 13:31:11] 2021-08-22 17:30:45,808 | DEBUG    | pilot.control.job                | has_job_completed         | ls -lF /var/lib/boinc-client/slots/17:
[2021-08-22 13:31:11] 
[2021-08-22 13:31:11] 2021-08-22 17:30:45,808 | INFO     | pilot.util.container             | execute                   | executing command: ls -lF /var/lib/boinc-client/slots/17
[2021-08-22 13:31:11] 2021-08-22 17:30:45,836 | DEBUG    | pilot.control.job                | has_job_completed         | total 42884
[2021-08-22 13:31:11] -rw------- 1 boinc boinc   130775 Aug 22 13:30 2498966d-222f-470e-b98d-d5e2f2d16e80_75047.1.job.log
[2021-08-22 13:31:11] -rw------- 1 boinc boinc   174126 Aug 22 13:30 2498966d-222f-470e-b98d-d5e2f2d16e80_75047.1.job.log.tgz
[2021-08-22 13:31:11] -rw------- 1 boinc boinc  1079117 Aug 22 13:25 agis_schedconf.cvmfs.json
[2021-08-22 13:31:11] -rw-r--r-- 1 boinc boinc        0 Aug 22 13:24 boinc_lockfile
[2021-08-22 13:31:11] -rw-r--r-- 1 boinc boinc     8192 Aug 22 13:30 boinc_mmap_file
[2021-08-22 13:31:11] -rw-r--r-- 1 boinc boinc      532 Aug 22 13:30 boinc_task_state.xml
[2021-08-22 13:31:11] -rw------- 1 boinc boinc  1949854 Aug 22 13:25 cric_ddmendpoints.json
[2021-08-22 13:31:11] -rw-r--r-- 1 boinc boinc 37620382 Aug 22 13:24 EVNT.04972714._000038.pool.root.1
[2021-08-22 13:31:11] -rw------- 1 boinc boinc     6979 Aug 22 13:30 heartbeat.json
[2021-08-22 13:31:11] -rw-r--r-- 1 boinc boinc     9083 Aug 22 13:24 init_data.xml
[2021-08-22 13:31:11] -rw-r--r-- 1 boinc boinc   350485 Aug 22 13:24 input.tar.gz
[2021-08-22 13:31:11] -rw-r--r-- 1 boinc boinc      112 Aug 22 13:24 job.xml
[2021-08-22 13:31:11] -rw------- 1 boinc boinc     1008 Aug 22 13:30 memory_monitor_summary.json
[2021-08-22 13:31:11] -rw------- 1 boinc boinc  1975247 Aug 22 13:30 output.1.2498966d-222f-470e-b98d-d5e2f2d16e80_75047.pool.root
[2021-08-22 13:31:11] -rw------- 1 boinc boinc      536 Aug 22 13:30 output.list
[2021-08-22 13:31:11] -rw-r--r-- 1 boinc boinc     2609 Aug 22 13:24 pandaJob.out
[2021-08-22 13:31:11] drwxrwx--- 2 boinc boinc     4096 Aug 22 13:30 PanDA_Pilot-5162421709/
[2021-08-22 13:31:11] drwx------ 4 boinc boinc     4096 Aug 22 13:25 pilot2/
[2021-08-22 13:31:11] -rw-r--r-- 1 boinc boinc   340725 Aug 22 12:29 pilot2.tar.gz
[2021-08-22 13:31:11] -rw------- 1 boinc boinc   111601 Aug 22 13:30 pilotlog.txt
[2021-08-22 13:31:11] -rw------- 1 boinc boinc      128 Aug 22 13:24 QDfLDm5N6bzn7Olcko1bjSoqABFKDmABFKDmumdXDmSwGKDmrM6V5n.diag
[2021-08-22 13:31:11] -rw-r--r-- 1 boinc boinc     3214 Aug 22 13:24 queuedata.json
[2021-08-22 13:31:11] -rwxr-xr-x 1 boinc boinc     6966 Aug 22 13:24 run_atlas*
[2021-08-22 13:31:11] -rwx------ 1 boinc boinc    20633 Aug 22 13:24 runpilot2-wrapper.sh*
[2021-08-22 13:31:11] -rw-r--r-- 1 boinc boinc      407 Aug 22 13:24 runtime_log
[2021-08-22 13:31:11] -rw-r--r-- 1 boinc boinc     6951 Aug 22 13:24 runtime_log.err
[2021-08-22 13:31:11] -rw------- 1 boinc boinc      463 Aug 22 13:24 setup.sh.local
[2021-08-22 13:31:11] drwxrwx--x 2 boinc boinc     4096 Aug 22 13:24 shared/
[2021-08-22 13:31:11] -rw-r--r-- 1 boinc boinc    16551 Aug 22 13:24 start_atlas.sh
[2021-08-22 13:31:11] -rw-r--r-- 1 boinc boinc     1842 Aug 22 13:24 stderr.txt
[2021-08-22 13:31:11] -rw-r--r-- 1 boinc boinc      107 Aug 22 13:24 wrapper_26015_x86_64-pc-linux-gnu
[2021-08-22 13:31:11] -rw-r--r-- 1 boinc boinc       24 Aug 22 13:30 wrapper_checkpoint.txt
[2021-08-22 13:31:11] 2021-08-22 17:30:45,836 | INFO     | pilot.util.queuehandling         | queue_report              | queue jobs has 0 job(s)
[2021-08-22 13:31:11] 2021-08-22 17:30:45,836 | INFO     | pilot.util.queuehandling         | queue_report              | queue payloads has 0 job(s)
[2021-08-22 13:31:11] 2021-08-22 17:30:45,836 | INFO     | pilot.util.queuehandling         | queue_report              | queue data_in has 0 job(s)
[2021-08-22 13:31:11] 2021-08-22 17:30:45,836 | INFO     | pilot.util.queuehandling         | queue_report              | queue data_out has 0 job(s)
[2021-08-22 13:31:11] 2021-08-22 17:30:45,836 | INFO     | pilot.util.queuehandling         | queue_report              | queue current_data_in has 0 job(s)
[2021-08-22 13:31:11] 2021-08-22 17:30:45,836 | INFO     | pilot.util.queuehandling         | queue_report              | queue validated_jobs has 0 job(s)
[2021-08-22 13:31:11] 2021-08-22 17:30:45,836 | INFO     | pilot.util.queuehandling         | queue_report              | queue validated_payloads has 0 job(s)
[2021-08-22 13:31:11] 2021-08-22 17:30:45,836 | INFO     | pilot.util.queuehandling         | queue_report              | queue monitored_payloads has 0 job(s)
[2021-08-22 13:31:11] 2021-08-22 17:30:45,837 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_jobs has 0 job(s)
[2021-08-22 13:31:11] 2021-08-22 17:30:45,837 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_payloads has 0 job(s)
[2021-08-22 13:31:11] 2021-08-22 17:30:45,837 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_data_in has 1 job(s)
[2021-08-22 13:31:11] 2021-08-22 17:30:45,837 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_data_out has 0 job(s)
[2021-08-22 13:31:11] 2021-08-22 17:30:45,837 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_jobs has 0 job(s)
[2021-08-22 13:31:11] 2021-08-22 17:30:45,837 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_payloads has 0 job(s)
[2021-08-22 13:31:11] 2021-08-22 17:30:45,837 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_data_in has 0 job(s)
[2021-08-22 13:31:11] 2021-08-22 17:30:45,837 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_data_out has 0 job(s)
[2021-08-22 13:31:11] 2021-08-22 17:30:45,837 | INFO     | pilot.util.queuehandling         | queue_report              | queue completed_jobs has 0 job(s)
[2021-08-22 13:31:11] 2021-08-22 17:30:45,837 | INFO     | pilot.util.queuehandling         | queue_report              | queue completed_jobids has 1 job(s)
[2021-08-22 13:31:11] 2021-08-22 17:30:45,837 | INFO     | pilot.control.job                | has_job_completed         | job 5162421709 has completed (purged errors)
[2021-08-22 13:31:11] 2021-08-22 17:30:45,837 | INFO     | pilot.util.processes             | cleanup                   | overall cleanup function is called
[2021-08-22 13:31:11] 2021-08-22 17:30:45,840 | DEBUG    | pilot.util.processes             | cleanup                   | work directory was removed: /var/lib/boinc-client/slots/17/PanDA_Pilot-5162421709
[2021-08-22 13:31:11] 2021-08-22 17:30:46,844 | INFO     | pilot.info.jobdata               | collect_zombies           | --- collectZombieJob: --- 10, [1172970]
[2021-08-22 13:31:11] 2021-08-22 17:30:46,845 | INFO     | pilot.info.jobdata               | collect_zombies           | zombie collector trying to kill pid 1172970
[2021-08-22 13:31:11] 2021-08-22 17:30:46,845 | INFO     | pilot.info.jobdata               | collect_zombies           | harmless exception when collecting zombies: [Errno 10] No child processes
[2021-08-22 13:31:11] 2021-08-22 17:30:47,850 | INFO     | pilot.util.processes             | cleanup                   | collected zombie processes
[2021-08-22 13:31:11] 2021-08-22 17:30:47,850 | INFO     | pilot.util.processes             | cleanup                   | will now attempt to kill all subprocesses of pid=1172970
[2021-08-22 13:31:11] 2021-08-22 17:30:47,926 | INFO     | pilot.util.processes             | kill_processes            | process IDs to be killed: [1172970] (in reverse order)
[2021-08-22 13:31:11] 2021-08-22 17:30:48,003 | WARNING  | pilot.util.processes             | kill_processes            | found no corresponding commands to process id(s)
[2021-08-22 13:31:11] 2021-08-22 17:30:48,003 | INFO     | pilot.util.processes             | kill_orphans              | Do not look for orphan processes in BOINC jobs
[2021-08-22 13:31:11] 2021-08-22 17:30:48,003 | DEBUG    | pilot.util.queuehandling         | purge_queue               | queue purged
[2021-08-22 13:31:11] 2021-08-22 17:30:48,003 | INFO     | pilot.control.job                | retrieve                  | ready for new job
[2021-08-22 13:31:11] 2021-08-22 17:30:48,003 | INFO     | root                             | retrieve                  | pilot has finished for previous job - re-establishing logging
[2021-08-22 13:31:11] 2021-08-22 17:30:48,004 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | *****************************************
[2021-08-22 13:31:11] 2021-08-22 17:30:48,004 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ***  PanDA Pilot version 2.12.3 (13)  ***
[2021-08-22 13:31:11] 2021-08-22 17:30:48,004 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | *****************************************
[2021-08-22 13:31:11] 2021-08-22 17:30:48,004 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | 
[2021-08-22 13:31:11] 2021-08-22 17:30:48,022 | INFO     | pilot.util.auxiliary             | display_architecture_info | architecture information:
[2021-08-22 13:31:11] 2021-08-22 17:30:48,132 | INFO     | pilot.util.auxiliary             | display_architecture_info | 
[2021-08-22 13:31:11] LSB Version:	:core-4.1-amd64:core-4.1-noarch
[2021-08-22 13:31:11] Distributor ID:	CentOS
[2021-08-22 13:31:11] Description:	CentOS Linux release 7.8.2003 (Core)
[2021-08-22 13:31:11] Release:	7.8.2003
[2021-08-22 13:31:11] Codename:	Core
[2021-08-22 13:31:11] 2021-08-22 17:30:48,132 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | *****************************************
[2021-08-22 13:31:11] 2021-08-22 17:30:48,635 | DEBUG    | pilot.util.monitoring            | check_local_space         | checking local space on /var/lib/boinc-client/slots/17
[2021-08-22 13:31:11] 2021-08-22 17:30:48,655 | INFO     | pilot.util.monitoring            | check_local_space         | sufficient remaining disk space (382283546624 B)
[2021-08-22 13:31:11] 2021-08-22 17:30:48,656 | WARNING  | pilot.control.job                | proceed_with_getjob       | since timefloor is set to 0, pilot was only allowed to run one job
[2021-08-22 13:31:11] 2021-08-22 17:30:48,656 | DEBUG    | pilot.control.job                | retrieve                  | will not set job_aborted yet
[2021-08-22 13:31:11] 2021-08-22 17:30:48,656 | WARNING  | pilot.control.monitor            | control                   | aborting monitor loop since graceful_stop has been set
[2021-08-22 13:31:11] 2021-08-22 17:30:48,656 | DEBUG    | pilot.control.job                | retrieve                  | [job] retrieve thread has finished
[2021-08-22 13:31:11] 2021-08-22 17:30:48,656 | INFO     | pilot.control.monitor            | control                   | [monitor] control thread has ended
[2021-08-22 13:31:11] 2021-08-22 17:30:48,727 | WARNING  | pilot.util.common                | should_abort              | data:copytool_out:received graceful stop - abort after this iteration
[2021-08-22 13:31:11] 2021-08-22 17:30:48,790 | DEBUG    | pilot.control.data               | copytool_in               | will not set job_aborted yet
[2021-08-22 13:31:11] 2021-08-22 17:30:48,790 | DEBUG    | pilot.control.data               | copytool_in               | [data] copytool_in thread has finished
[2021-08-22 13:31:11] 2021-08-22 17:30:49,137 | DEBUG    | pilot.control.payload            | execute_payloads          | will not set job_aborted yet
[2021-08-22 13:31:11] 2021-08-22 17:30:49,137 | INFO     | pilot.control.payload            | execute_payloads          | [payload] execute_payloads thread has finished
[2021-08-22 13:31:11] 2021-08-22 17:30:49,483 | DEBUG    | pilot.control.job                | control                   | job control ending since graceful_stop has been set
[2021-08-22 13:31:11] 2021-08-22 17:30:49,483 | DEBUG    | pilot.control.job                | control                   | will not set job_aborted yet
[2021-08-22 13:31:11] 2021-08-22 17:30:49,483 | DEBUG    | pilot.control.job                | control                   | [job] control thread has finished
[2021-08-22 13:31:11] 2021-08-22 17:30:49,530 | DEBUG    | pilot.control.data               | control                   | data control ending since graceful_stop has been set
[2021-08-22 13:31:11] 2021-08-22 17:30:49,530 | DEBUG    | pilot.control.data               | control                   | will not set job_aborted yet
[2021-08-22 13:31:11] 2021-08-22 17:30:49,531 | DEBUG    | pilot.control.data               | control                   | [data] control thread has finished
[2021-08-22 13:31:11] 2021-08-22 17:30:49,668 | DEBUG    | pilot.control.payload            | control                   | payload control ending since graceful_stop has been set
[2021-08-22 13:31:11] 2021-08-22 17:30:49,669 | DEBUG    | pilot.control.payload            | control                   | will not set job_aborted yet
[2021-08-22 13:31:11] 2021-08-22 17:30:49,669 | DEBUG    | pilot.control.payload            | control                   | [payload] control thread has finished
[2021-08-22 13:31:11] 2021-08-22 17:30:49,717 | DEBUG    | pilot.control.payload            | validate_post             | will not set job_aborted yet
[2021-08-22 13:31:11] 2021-08-22 17:30:49,717 | INFO     | pilot.control.payload            | validate_post             | [payload] validate_post thread has finished
[2021-08-22 13:31:11] 2021-08-22 17:30:49,728 | DEBUG    | pilot.control.data               | copytool_out              | will not set job_aborted yet
[2021-08-22 13:31:11] 2021-08-22 17:30:49,728 | DEBUG    | pilot.control.data               | copytool_out              | [data] copytool_out thread has finished
[2021-08-22 13:31:11] 2021-08-22 17:30:49,774 | DEBUG    | pilot.control.job                | create_data_payload       | will not set job_aborted yet
[2021-08-22 13:31:11] 2021-08-22 17:30:49,774 | DEBUG    | pilot.control.job                | create_data_payload       | [job] create_data_payload thread has finished
[2021-08-22 13:31:11] 2021-08-22 17:30:49,837 | DEBUG    | pilot.control.payload            | validate_pre              | will not set job_aborted yet
[2021-08-22 13:31:11] 2021-08-22 17:30:49,837 | INFO     | pilot.control.payload            | validate_pre              | [payload] validate_pre thread has finished
[2021-08-22 13:31:11] 2021-08-22 17:30:49,849 | DEBUG    | pilot.control.job                | validate                  | will not set job_aborted yet
[2021-08-22 13:31:11] 2021-08-22 17:30:49,849 | DEBUG    | pilot.control.job                | validate                  | [job] validate thread has finished
[2021-08-22 13:31:11] 2021-08-22 17:30:50,001 | DEBUG    | pilot.control.payload            | failed_post               | will not set job_aborted yet
[2021-08-22 13:31:11] 2021-08-22 17:30:50,001 | INFO     | pilot.control.payload            | failed_post               | [payload] failed_post thread has finished
[2021-08-22 13:31:11] 2021-08-22 17:30:50,816 | WARNING  | pilot.util.common                | should_abort              | job:queue_monitor:received graceful stop - abort after this iteration
[2021-08-22 13:31:11] 2021-08-22 17:30:50,817 | DEBUG    | pilot.control.job                | queue_monitor             | will not set job_aborted yet
[2021-08-22 13:31:11] 2021-08-22 17:30:50,817 | DEBUG    | pilot.control.job                | queue_monitor             | [job] queue monitor thread has finished
[2021-08-22 13:31:11] 2021-08-22 17:30:51,012 | WARNING  | pilot.util.common                | should_abort              | data:queue_monitoring:received graceful stop - abort after this iteration
[2021-08-22 13:31:11] 2021-08-22 17:30:54,013 | DEBUG    | pilot.control.data               | queue_monitoring          | will not set job_aborted yet
[2021-08-22 13:31:11] 2021-08-22 17:30:54,013 | DEBUG    | pilot.control.data               | queue_monitoring          | [data] queue_monitor thread has finished
[2021-08-22 13:31:11] 2021-08-22 17:31:11,096 | WARNING  | pilot.control.job                | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 73 s)
[2021-08-22 13:31:11] 2021-08-22 17:31:11,097 | DEBUG    | pilot.util.processes             | threads_aborted           | aborting since the last relevant thread is about to finish
[2021-08-22 13:31:11] 2021-08-22 17:31:11,097 | DEBUG    | pilot.control.job                | job_monitor               | will proceed to set job_aborted
[2021-08-22 13:31:11] 2021-08-22 17:31:11,097 | DEBUG    | pilot.control.job                | job_monitor               | [job] job monitor thread has finished
[2021-08-22 13:31:11] 2021-08-22 17:31:11,759 | INFO     | pilot.workflow.generic           | run                       | end of generic workflow (traces error code: 0)
[2021-08-22 13:31:11] 2021-08-22 17:31:11,759 | INFO     | root                             | wrap_up                   | traces error code: 0
[2021-08-22 13:31:11] 2021-08-22 17:31:11,759 | INFO     | root                             | wrap_up                   | pilot has finished
[2021-08-22 13:31:11] 2021-08-22 17:31:11,806 [wrapper] ==== pilot stdout END ====
[2021-08-22 13:31:11] 2021-08-22 17:31:11,812 [wrapper] ==== wrapper stdout RESUME ====
[2021-08-22 13:31:11] 2021-08-22 17:31:11,819 [wrapper] Pilot exit status: 0
[2021-08-22 13:31:11] 2021-08-22 17:31:11,838 [wrapper] pandaids: 5162421709
[2021-08-22 13:31:11] 2021-08-22 17:31:11,849 [wrapper] apfmon messages muted
[2021-08-22 13:31:11] 2021-08-22 17:31:11,855 [wrapper] Test setup, not cleaning
[2021-08-22 13:31:11] 2021-08-22 17:31:11,861 [wrapper] ==== wrapper stdout END ====
[2021-08-22 13:31:11] 2021-08-22 17:31:11,867 [wrapper] ==== wrapper stderr END ====
[2021-08-22 13:31:11] 2021-08-22 17:31:11,878 [wrapper] wrapperexiting ec=0, duration=373
[2021-08-22 13:31:11] 2021-08-22 17:31:11,884 [wrapper] apfmon messages muted
[2021-08-22 13:31:11]  *** Error codes and diagnostics ***
[2021-08-22 13:31:11]     "exeErrorCode": 0,
[2021-08-22 13:31:11]     "exeErrorDiag": "",
[2021-08-22 13:31:11]     "pilotErrorCode": 0,
[2021-08-22 13:31:11]     "pilotErrorDiag": "",
[2021-08-22 13:31:11]  *** Listing of results directory ***
[2021-08-22 13:31:11] total 45080
[2021-08-22 13:31:11] -rw-r--r-- 1 boinc boinc   340725 Aug 22 12:29 pilot2.tar.gz
[2021-08-22 13:31:11] -rwx------ 1 boinc boinc    20633 Aug 22 13:24 runpilot2-wrapper.sh
[2021-08-22 13:31:11] -rw-r--r-- 1 boinc boinc     3214 Aug 22 13:24 queuedata.json
[2021-08-22 13:31:11] -rw-r--r-- 1 boinc boinc      107 Aug 22 13:24 wrapper_26015_x86_64-pc-linux-gnu
[2021-08-22 13:31:11] -rwxr-xr-x 1 boinc boinc     6966 Aug 22 13:24 run_atlas
[2021-08-22 13:31:11] -rw-r--r-- 1 boinc boinc      112 Aug 22 13:24 job.xml
[2021-08-22 13:31:11] drwxrwx--x 2 boinc boinc     4096 Aug 22 13:24 shared
[2021-08-22 13:31:11] -rw-r--r-- 1 boinc boinc     9083 Aug 22 13:24 init_data.xml
[2021-08-22 13:31:11] -rw-r--r-- 1 boinc boinc        0 Aug 22 13:24 boinc_lockfile
[2021-08-22 13:31:11] -rw-r--r-- 1 boinc boinc    16551 Aug 22 13:24 start_atlas.sh
[2021-08-22 13:31:11] -rw-r--r-- 1 boinc boinc   350485 Aug 22 13:24 input.tar.gz
[2021-08-22 13:31:11] -rw-r--r-- 1 boinc boinc 37620382 Aug 22 13:24 EVNT.04972714._000038.pool.root.1
[2021-08-22 13:31:11] -rw-r--r-- 1 boinc boinc     2609 Aug 22 13:24 pandaJob.out
[2021-08-22 13:31:11] -rw------- 1 boinc boinc      463 Aug 22 13:24 setup.sh.local
[2021-08-22 13:31:11] -rw------- 1 boinc boinc  1079117 Aug 22 13:25 agis_schedconf.cvmfs.json
[2021-08-22 13:31:11] -rw------- 1 boinc boinc  1949854 Aug 22 13:25 cric_ddmendpoints.json
[2021-08-22 13:31:11] drwx------ 4 boinc boinc     4096 Aug 22 13:25 pilot2
[2021-08-22 13:31:11] -rw------- 1 boinc boinc  1975247 Aug 22 13:30 output.1.2498966d-222f-470e-b98d-d5e2f2d16e80_75047.pool.root
[2021-08-22 13:31:11] -rw------- 1 boinc boinc     1008 Aug 22 13:30 memory_monitor_summary.json
[2021-08-22 13:31:11] -rw-r--r-- 1 boinc boinc     8192 Aug 22 13:30 boinc_mmap_file
[2021-08-22 13:31:11] -rw-r--r-- 1 boinc boinc       24 Aug 22 13:30 wrapper_checkpoint.txt
[2021-08-22 13:31:11] -rw------- 1 boinc boinc   174126 Aug 22 13:30 2498966d-222f-470e-b98d-d5e2f2d16e80_75047.1.job.log.tgz
[2021-08-22 13:31:11] -rw-r--r-- 1 boinc boinc      532 Aug 22 13:30 boinc_task_state.xml
[2021-08-22 13:31:11] -rw------- 1 boinc boinc     6979 Aug 22 13:30 heartbeat.json
[2021-08-22 13:31:11] -rw------- 1 boinc boinc     7523 Aug 22 13:31 pilotlog.txt
[2021-08-22 13:31:11] -rw------- 1 boinc boinc   145675 Aug 22 13:31 2498966d-222f-470e-b98d-d5e2f2d16e80_75047.1.job.log
[2021-08-22 13:31:11] -rw------- 1 boinc boinc      536 Aug 22 13:31 output.list
[2021-08-22 13:31:11] -rw-r--r-- 1 boinc boinc    10940 Aug 22 13:31 runtime_log.err
[2021-08-22 13:31:11] -rw-r--r-- 1 boinc boinc      748 Aug 22 13:31 runtime_log
[2021-08-22 13:31:11] -rw------- 1 boinc boinc  2314240 Aug 22 13:31 result.tar.gz
[2021-08-22 13:31:11] -rw------- 1 boinc boinc      554 Aug 22 13:31 QDfLDm5N6bzn7Olcko1bjSoqABFKDmABFKDmumdXDmSwGKDmrM6V5n.diag
[2021-08-22 13:31:11] -rw-r--r-- 1 boinc boinc    29124 Aug 22 13:31 stderr.txt
[2021-08-22 13:31:11] HITS file was successfully produced:
[2021-08-22 13:31:11] -rw------- 1 boinc boinc 1975247 Aug 22 13:30 shared/HITS.pool.root.1
[2021-08-22 13:31:11]  *** Contents of shared directory: ***
[2021-08-22 13:31:11] total 41296
[2021-08-22 13:31:11] -rw-r--r-- 1 boinc boinc    16551 Aug 22 13:24 start_atlas.sh
[2021-08-22 13:31:11] -rw-r--r-- 1 boinc boinc   350485 Aug 22 13:24 input.tar.gz
[2021-08-22 13:31:11] -rw-r--r-- 1 boinc boinc 37620382 Aug 22 13:24 ATLAS.root_0
[2021-08-22 13:31:11] -rw------- 1 boinc boinc  1975247 Aug 22 13:30 HITS.pool.root.1
[2021-08-22 13:31:11] -rw------- 1 boinc boinc  2314240 Aug 22 13:31 result.tar.gz
13:31:13 (1163118): run_atlas exited; CPU time 160.561834
13:31:13 (1163118): called boinc_finish(0)

</stderr_txt>
]]>


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