Name | RyWLDmrlUczn7Olcko1bjSoqABFKDmABFKDmumdXDmvxGKDmXxV8zm_0 |
Workunit | 2122025 |
Created | 23 Aug 2021, 19:26:45 UTC |
Sent | 23 Aug 2021, 19:28:00 UTC |
Report deadline | 30 Aug 2021, 19:28:00 UTC |
Received | 23 Aug 2021, 21:48:14 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 4456 |
Run time | 8 min 30 sec |
CPU time | 5 min 17 sec |
Validate state | Valid |
Credit | 51.62 |
Device peak FLOPS | 43.72 GFLOPS |
Application version | ATLAS Simulation v1.04 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.40 GB |
Peak swap size | 2.12 GB |
Peak disk usage | 78.34 MB |
<core_client_version>7.16.6</core_client_version> <![CDATA[ <stderr_txt> 17:39:33 (1407028): wrapper (7.7.26015): starting 17:39:33 (1407028): wrapper: running run_atlas (--nthreads 8) [2021-08-23 17:39:33] Arguments: --nthreads 8 [2021-08-23 17:39:33] Threads: 8 [2021-08-23 17:39:33] Checking for CVMFS [2021-08-23 17:39:33] Probing /cvmfs/atlas.cern.ch... OK [2021-08-23 17:39:33] Probing /cvmfs/atlas-condb.cern.ch... OK [2021-08-23 17:39:33] Running cvmfs_config stat atlas.cern.ch [2021-08-23 17:39:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2021-08-23 17:39:33] 2.9.0.0 1238788 132 74608 90810 4 77 5471388 6144000 2703 130560 0 1038726 98.832 1168110 12040 http://s1fnal-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.100:3128 1 [2021-08-23 17:39:33] CVMFS is ok [2021-08-23 17:39:33] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2021-08-23 17:39:33] Checking for singularity binary... [2021-08-23 17:39:33] Using singularity found in PATH at /usr/local/bin/singularity [2021-08-23 17:39:33] Running /usr/local/bin/singularity --version [2021-08-23 17:39:33] singularity version 3.8.1 [2021-08-23 17:39:33] Checking singularity works with /usr/local/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2021-08-23 17:39:33] WARNING: While bind mounting '/cvmfs:/cvmfs': destination is already in the mount point list GONDOR [2021-08-23 17:39:33] Singularity works [2021-08-23 17:39:33] Set ATHENA_PROC_NUMBER=8 [2021-08-23 17:39:33] Starting ATLAS job with PandaID=5163567418 [2021-08-23 17:39:33] Running command: /usr/local/bin/singularity exec --pwd /var/lib/boinc-client/slots/2 -B /cvmfs,/var /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2021-08-23 17:48:00] *** The last 200 lines of the pilot log: *** [2021-08-23 17:48:00] }, [2021-08-23 17:48:00] "transform": { [2021-08-23 17:48:00] "cpuEfficiency": 0.8883, [2021-08-23 17:48:00] "cpuPWEfficiency": 0.8883, [2021-08-23 17:48:00] "cpuTime": 4, [2021-08-23 17:48:00] "cpuTimeTotal": 307, [2021-08-23 17:48:00] "externalCpuTime": 2, [2021-08-23 17:48:00] "processedEvents": 2, [2021-08-23 17:48:00] "trfPredata": null, [2021-08-23 17:48:00] "wallTime": 349 [2021-08-23 17:48:00] } [2021-08-23 17:48:00] } [2021-08-23 17:48:00] } [2021-08-23 17:48:00] 2021-08-23 21:47:28,756 | DEBUG | pilot.user.atlas.common | update_server | no need to update logstash for this job [2021-08-23 17:48:00] 2021-08-23 21:47:28,756 | INFO | pilot.control.job | send_state | pilot will not update the server (heartbeat message will be written to file) [2021-08-23 17:48:00] 2021-08-23 21:47:28,756 | INFO | pilot.control.job | send_state | job 5163567418 has finished - writing final server update [2021-08-23 17:48:00] 2021-08-23 21:47:28,756 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics_string | job definition core count: 8 [2021-08-23 17:48:00] 2021-08-23 21:47:28,756 | INFO | pilot.user.atlas.jobmetrics | get_job_metrics_string | will not add max space = -36393044 B to job metrics [2021-08-23 17:48:00] 2021-08-23 21:47:28,756 | WARNING | pilot.api.analytics | get_fitted_data | wrong length of table data, x=[], y=[] (must be same and length>=4) [2021-08-23 17:48:00] 2021-08-23 21:47:28,757 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics | job metrics="nEvents=2 dbTime=14.88 dbData=4274626 eventnumber=12002" [2021-08-23 17:48:00] 2021-08-23 21:47:28,757 | INFO | pilot.control.job | get_data_structure | mean actualcorecount: 4.000000 [2021-08-23 17:48:00] 2021-08-23 21:47:28,757 | INFO | pilot.control.job | get_data_structure | total number of processed events: 2 (read) [2021-08-23 17:48:00] 2021-08-23 21:47:28,775 | INFO | pilot.util.container | execute | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2021-08-23 17:48:00] 2021-08-23 21:47:28,845 | INFO | pilot.user.atlas.utilities | get_memory_values | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-5163567418/memory_monitor_summary.json (trf na [2021-08-23 17:48:00] 2021-08-23 21:47:28,845 | DEBUG | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'HW': {'cpu': {'CPUs': 32, 'CoresPerSocket': 16, 'ModelName': 'AMD Ryzen Threadr [2021-08-23 17:48:00] 2021-08-23 21:47:28,846 | INFO | pilot.control.job | add_memory_info | memory information not available: 'Max' [2021-08-23 17:48:00] 2021-08-23 21:47:28,846 | INFO | pilot.util.timing | timing_report | .............................. [2021-08-23 17:48:00] 2021-08-23 21:47:28,846 | INFO | pilot.util.timing | timing_report | . Timing measurements: [2021-08-23 17:48:00] 2021-08-23 21:47:28,846 | INFO | pilot.util.timing | timing_report | . get job = 0 s [2021-08-23 17:48:00] 2021-08-23 21:47:28,846 | INFO | pilot.util.timing | timing_report | . initial setup = 1 s [2021-08-23 17:48:00] 2021-08-23 21:47:28,846 | INFO | pilot.util.timing | timing_report | . payload setup = 13 s [2021-08-23 17:48:00] 2021-08-23 21:47:28,846 | INFO | pilot.util.timing | timing_report | . total setup = 14 s [2021-08-23 17:48:00] 2021-08-23 21:47:28,846 | INFO | pilot.util.timing | timing_report | . stage-in = 0 s [2021-08-23 17:48:00] 2021-08-23 21:47:28,846 | INFO | pilot.util.timing | timing_report | . payload execution = 422 s [2021-08-23 17:48:00] 2021-08-23 21:47:28,846 | INFO | pilot.util.timing | timing_report | . stage-out = 0 s [2021-08-23 17:48:00] 2021-08-23 21:47:28,846 | INFO | pilot.util.timing | timing_report | .............................. [2021-08-23 17:48:00] 2021-08-23 21:47:28,846 | DEBUG | pilot.control.job | send_state | is_harvester_mode(args) : False [2021-08-23 17:48:00] 2021-08-23 21:47:28,847 | DEBUG | pilot.control.job | write_heartbeat_to_file | heartbeat dictionary: {'jobId': '5163567418', 'state': 'finished', 'timestamp': '2021-08-23T17:47:28 [2021-08-23 17:48:00] 2021-08-23 21:47:28,847 | DEBUG | pilot.control.job | write_heartbeat_to_file | wrote heartbeat to file /var/lib/boinc-client/slots/2/heartbeat.json [2021-08-23 17:48:00] 2021-08-23 21:47:28,847 | DEBUG | pilot.control.job | queue_monitor | job 5163567418 was dequeued from the monitored payloads queue [2021-08-23 17:48:00] 2021-08-23 21:47:28,922 | DEBUG | pilot.control.job | queue_monitor | tmp job object deleted [2021-08-23 17:48:00] 2021-08-23 21:47:28,957 | INFO | pilot.control.job | make_job_report | [2021-08-23 17:48:00] 2021-08-23 21:47:28,958 | INFO | pilot.control.job | make_job_report | job summary report [2021-08-23 17:48:00] 2021-08-23 21:47:28,958 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2021-08-23 17:48:00] 2021-08-23 21:47:28,958 | INFO | pilot.control.job | make_job_report | PanDA job id: 5163567418 [2021-08-23 17:48:00] 2021-08-23 21:47:28,958 | INFO | pilot.control.job | make_job_report | task id: NULL [2021-08-23 17:48:00] 2021-08-23 21:47:28,958 | INFO | pilot.control.job | make_job_report | errors: (none) [2021-08-23 17:48:00] 2021-08-23 21:47:28,958 | INFO | pilot.control.job | make_job_report | status: LOG_TRANSFER = DONE [2021-08-23 17:48:00] 2021-08-23 21:47:28,958 | INFO | pilot.control.job | make_job_report | pilot state: finished [2021-08-23 17:48:00] 2021-08-23 21:47:28,958 | INFO | pilot.control.job | make_job_report | transexitcode: 0 [2021-08-23 17:48:00] 2021-08-23 21:47:28,959 | INFO | pilot.control.job | make_job_report | exeerrorcode: 0 [2021-08-23 17:48:00] 2021-08-23 21:47:28,959 | INFO | pilot.control.job | make_job_report | exeerrordiag: [2021-08-23 17:48:00] 2021-08-23 21:47:28,959 | INFO | pilot.control.job | make_job_report | exitcode: 0 [2021-08-23 17:48:00] 2021-08-23 21:47:28,959 | INFO | pilot.control.job | make_job_report | exitmsg: OK [2021-08-23 17:48:00] 2021-08-23 21:47:28,959 | INFO | pilot.control.job | make_job_report | cpuconsumptiontime: 347 s [2021-08-23 17:48:00] 2021-08-23 21:47:28,959 | INFO | pilot.control.job | make_job_report | nevents: 2 [2021-08-23 17:48:00] 2021-08-23 21:47:28,959 | INFO | pilot.control.job | make_job_report | neventsw: 0 [2021-08-23 17:48:00] 2021-08-23 21:47:28,959 | INFO | pilot.control.job | make_job_report | pid: 1414672 [2021-08-23 17:48:00] 2021-08-23 21:47:28,959 | INFO | pilot.control.job | make_job_report | pgrp: 1414672 [2021-08-23 17:48:00] 2021-08-23 21:47:28,959 | INFO | pilot.control.job | make_job_report | corecount: 8 [2021-08-23 17:48:00] 2021-08-23 21:47:28,959 | INFO | pilot.control.job | make_job_report | event service: False [2021-08-23 17:48:00] 2021-08-23 21:47:28,959 | INFO | pilot.control.job | make_job_report | sizes: {17254818: 3889258, 17254819: 3889424, 17254829: 3889366, 17255266: 3910702, 17255267: 392017 [2021-08-23 17:48:00] 2021-08-23 21:47:28,959 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2021-08-23 17:48:00] 2021-08-23 21:47:28,960 | INFO | pilot.control.job | make_job_report | [2021-08-23 17:48:00] 2021-08-23 21:47:28,960 | DEBUG | pilot.control.job | has_job_completed | ls -lF /var/lib/boinc-client/slots/2: [2021-08-23 17:48:00] [2021-08-23 17:48:00] 2021-08-23 21:47:28,960 | INFO | pilot.util.container | execute | executing command: ls -lF /var/lib/boinc-client/slots/2 [2021-08-23 17:48:00] 2021-08-23 21:47:28,987 | DEBUG | pilot.control.job | has_job_completed | total 42008 [2021-08-23 17:48:00] -rw------- 1 boinc boinc 1079489 Aug 23 17:39 agis_schedconf.cvmfs.json [2021-08-23 17:48:00] -rw-r--r-- 1 boinc boinc 0 Aug 23 17:39 boinc_lockfile [2021-08-23 17:48:00] -rw-r--r-- 1 boinc boinc 8192 Aug 23 17:47 boinc_mmap_file [2021-08-23 17:48:00] -rw-r--r-- 1 boinc boinc 532 Aug 23 17:46 boinc_task_state.xml [2021-08-23 17:48:00] -rw------- 1 boinc boinc 140057 Aug 23 17:47 c333f4f2-a6de-4bde-8eeb-6aa9a47047a8_25741.1.job.log [2021-08-23 17:48:00] -rw------- 1 boinc boinc 154783 Aug 23 17:47 c333f4f2-a6de-4bde-8eeb-6aa9a47047a8_25741.1.job.log.tgz [2021-08-23 17:48:00] -rw------- 1 boinc boinc 1949854 Aug 23 17:39 cric_ddmendpoints.json [2021-08-23 17:48:00] -rw-r--r-- 1 boinc boinc 37438704 Aug 23 17:39 EVNT.04972714._000033.pool.root.1 [2021-08-23 17:48:00] -rw------- 1 boinc boinc 6833 Aug 23 17:47 heartbeat.json [2021-08-23 17:48:00] -rw-r--r-- 1 boinc boinc 9083 Aug 23 17:39 init_data.xml [2021-08-23 17:48:00] -rw-r--r-- 1 boinc boinc 350487 Aug 23 17:39 input.tar.gz [2021-08-23 17:48:00] -rw-r--r-- 1 boinc boinc 112 Aug 23 17:39 job.xml [2021-08-23 17:48:00] -rw------- 1 boinc boinc 286 Aug 23 17:47 memory_monitor_summary.json [2021-08-23 17:48:00] -rw------- 1 boinc boinc 1260388 Aug 23 17:46 output.1.c333f4f2-a6de-4bde-8eeb-6aa9a47047a8_25741.pool.root [2021-08-23 17:48:00] -rw------- 1 boinc boinc 536 Aug 23 17:47 output.list [2021-08-23 17:48:00] -rw-r--r-- 1 boinc boinc 2612 Aug 23 17:39 pandaJob.out [2021-08-23 17:48:00] drwxrwx--- 2 boinc boinc 4096 Aug 23 17:47 PanDA_Pilot-5163567418/ [2021-08-23 17:48:00] drwx------ 4 boinc boinc 4096 Aug 23 17:39 pilot2/ [2021-08-23 17:48:00] -rw-r--r-- 1 boinc boinc 340725 Aug 23 14:22 pilot2.tar.gz [2021-08-23 17:48:00] -rw------- 1 boinc boinc 120909 Aug 23 17:47 pilotlog.txt [2021-08-23 17:48:00] -rw-r--r-- 1 boinc boinc 3214 Aug 23 15:26 queuedata.json [2021-08-23 17:48:00] -rwxr-xr-x 1 boinc boinc 6966 Aug 23 17:39 run_atlas* [2021-08-23 17:48:00] -rwx------ 1 boinc boinc 20633 Aug 23 15:26 runpilot2-wrapper.sh* [2021-08-23 17:48:00] -rw-r--r-- 1 boinc boinc 407 Aug 23 17:39 runtime_log [2021-08-23 17:48:00] -rw-r--r-- 1 boinc boinc 6937 Aug 23 17:39 runtime_log.err [2021-08-23 17:48:00] -rw------- 1 boinc boinc 129 Aug 23 17:39 RyWLDmrlUczn7Olcko1bjSoqABFKDmABFKDmumdXDmvxGKDmXxV8zm.diag [2021-08-23 17:48:00] -rw------- 1 boinc boinc 463 Aug 23 17:39 setup.sh.local [2021-08-23 17:48:00] drwxrwx--x 2 boinc boinc 4096 Aug 23 17:39 shared/ [2021-08-23 17:48:00] -rw-r--r-- 1 boinc boinc 16551 Aug 23 17:39 start_atlas.sh [2021-08-23 17:48:00] -rw-r--r-- 1 boinc boinc 1850 Aug 23 17:39 stderr.txt [2021-08-23 17:48:00] -rw-r--r-- 1 boinc boinc 107 Aug 23 17:39 wrapper_26015_x86_64-pc-linux-gnu [2021-08-23 17:48:00] -rw-r--r-- 1 boinc boinc 24 Aug 23 17:47 wrapper_checkpoint.txt [2021-08-23 17:48:00] 2021-08-23 21:47:28,987 | INFO | pilot.util.queuehandling | queue_report | queue jobs has 0 job(s) [2021-08-23 17:48:00] 2021-08-23 21:47:28,987 | INFO | pilot.util.queuehandling | queue_report | queue payloads has 0 job(s) [2021-08-23 17:48:00] 2021-08-23 21:47:28,987 | INFO | pilot.util.queuehandling | queue_report | queue data_in has 0 job(s) [2021-08-23 17:48:00] 2021-08-23 21:47:28,987 | INFO | pilot.util.queuehandling | queue_report | queue data_out has 0 job(s) [2021-08-23 17:48:00] 2021-08-23 21:47:28,987 | INFO | pilot.util.queuehandling | queue_report | queue current_data_in has 0 job(s) [2021-08-23 17:48:00] 2021-08-23 21:47:28,987 | INFO | pilot.util.queuehandling | queue_report | queue validated_jobs has 0 job(s) [2021-08-23 17:48:00] 2021-08-23 21:47:28,987 | INFO | pilot.util.queuehandling | queue_report | queue validated_payloads has 0 job(s) [2021-08-23 17:48:00] 2021-08-23 21:47:28,987 | INFO | pilot.util.queuehandling | queue_report | queue monitored_payloads has 0 job(s) [2021-08-23 17:48:00] 2021-08-23 21:47:28,988 | INFO | pilot.util.queuehandling | queue_report | queue finished_jobs has 0 job(s) [2021-08-23 17:48:00] 2021-08-23 21:47:28,988 | INFO | pilot.util.queuehandling | queue_report | queue finished_payloads has 0 job(s) [2021-08-23 17:48:00] 2021-08-23 21:47:28,988 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_in has 1 job(s) [2021-08-23 17:48:00] 2021-08-23 21:47:28,988 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_out has 0 job(s) [2021-08-23 17:48:00] 2021-08-23 21:47:28,988 | INFO | pilot.util.queuehandling | queue_report | queue failed_jobs has 0 job(s) [2021-08-23 17:48:00] 2021-08-23 21:47:28,988 | INFO | pilot.util.queuehandling | queue_report | queue failed_payloads has 0 job(s) [2021-08-23 17:48:00] 2021-08-23 21:47:28,988 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_in has 0 job(s) [2021-08-23 17:48:00] 2021-08-23 21:47:28,988 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_out has 0 job(s) [2021-08-23 17:48:00] 2021-08-23 21:47:28,988 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobs has 0 job(s) [2021-08-23 17:48:00] 2021-08-23 21:47:28,988 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s) [2021-08-23 17:48:00] 2021-08-23 21:47:28,988 | INFO | pilot.control.job | has_job_completed | job 5163567418 has completed (purged errors) [2021-08-23 17:48:00] 2021-08-23 21:47:28,988 | INFO | pilot.util.processes | cleanup | overall cleanup function is called [2021-08-23 17:48:00] 2021-08-23 21:47:28,990 | DEBUG | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc-client/slots/2/PanDA_Pilot-5163567418 [2021-08-23 17:48:00] 2021-08-23 21:47:29,994 | INFO | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [1414672] [2021-08-23 17:48:00] 2021-08-23 21:47:29,994 | INFO | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 1414672 [2021-08-23 17:48:00] 2021-08-23 21:47:29,994 | INFO | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes [2021-08-23 17:48:00] 2021-08-23 21:47:30,999 | INFO | pilot.util.processes | cleanup | collected zombie processes [2021-08-23 17:48:00] 2021-08-23 21:47:31,000 | INFO | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=1414672 [2021-08-23 17:48:00] 2021-08-23 21:47:31,066 | INFO | pilot.util.processes | kill_processes | process IDs to be killed: [1414672] (in reverse order) [2021-08-23 17:48:00] 2021-08-23 21:47:31,119 | WARNING | pilot.util.processes | kill_processes | found no corresponding commands to process id(s) [2021-08-23 17:48:00] 2021-08-23 21:47:31,119 | INFO | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs [2021-08-23 17:48:00] 2021-08-23 21:47:31,119 | DEBUG | pilot.util.queuehandling | purge_queue | queue purged [2021-08-23 17:48:00] 2021-08-23 21:47:31,119 | INFO | pilot.control.job | retrieve | ready for new job [2021-08-23 17:48:00] 2021-08-23 21:47:31,119 | INFO | root | retrieve | pilot has finished for previous job - re-establishing logging [2021-08-23 17:48:00] 2021-08-23 21:47:31,120 | INFO | pilot.util.auxiliary | pilot_version_banner | ***************************************** [2021-08-23 17:48:00] 2021-08-23 21:47:31,120 | INFO | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 2.12.3 (13) *** [2021-08-23 17:48:00] 2021-08-23 21:47:31,120 | INFO | pilot.util.auxiliary | pilot_version_banner | ***************************************** [2021-08-23 17:48:00] 2021-08-23 21:47:31,120 | INFO | pilot.util.auxiliary | pilot_version_banner | [2021-08-23 17:48:00] 2021-08-23 21:47:31,139 | INFO | pilot.util.auxiliary | display_architecture_info | architecture information: [2021-08-23 17:48:00] 2021-08-23 21:47:31,256 | INFO | pilot.util.auxiliary | display_architecture_info | [2021-08-23 17:48:00] LSB Version: :core-4.1-amd64:core-4.1-noarch [2021-08-23 17:48:00] Distributor ID: CentOS [2021-08-23 17:48:00] Description: CentOS Linux release 7.8.2003 (Core) [2021-08-23 17:48:00] Release: 7.8.2003 [2021-08-23 17:48:00] Codename: Core [2021-08-23 17:48:00] 2021-08-23 21:47:31,256 | INFO | pilot.util.auxiliary | pilot_version_banner | ***************************************** [2021-08-23 17:48:00] 2021-08-23 21:47:31,758 | DEBUG | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc-client/slots/2 [2021-08-23 17:48:00] 2021-08-23 21:47:31,785 | INFO | pilot.util.monitoring | check_local_space | sufficient remaining disk space (100879302656 B) [2021-08-23 17:48:00] 2021-08-23 21:47:31,785 | WARNING | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job [2021-08-23 17:48:00] 2021-08-23 21:47:31,786 | DEBUG | pilot.control.job | retrieve | will not set job_aborted yet [2021-08-23 17:48:00] 2021-08-23 21:47:31,786 | WARNING | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration [2021-08-23 17:48:00] 2021-08-23 21:47:31,786 | WARNING | pilot.control.monitor | control | aborting monitor loop since graceful_stop has been set [2021-08-23 17:48:00] 2021-08-23 21:47:31,786 | DEBUG | pilot.control.job | retrieve | [job] retrieve thread has finished [2021-08-23 17:48:00] 2021-08-23 21:47:31,786 | INFO | pilot.control.monitor | control | [monitor] control thread has ended [2021-08-23 17:48:00] 2021-08-23 21:47:31,929 | WARNING | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration [2021-08-23 17:48:00] 2021-08-23 21:47:32,217 | DEBUG | pilot.control.payload | execute_payloads | will not set job_aborted yet [2021-08-23 17:48:00] 2021-08-23 21:47:32,217 | INFO | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished [2021-08-23 17:48:00] 2021-08-23 21:47:32,236 | DEBUG | pilot.control.job | control | job control ending since graceful_stop has been set [2021-08-23 17:48:00] 2021-08-23 21:47:32,236 | DEBUG | pilot.control.job | control | will not set job_aborted yet [2021-08-23 17:48:00] 2021-08-23 21:47:32,236 | DEBUG | pilot.control.job | control | [job] control thread has finished [2021-08-23 17:48:00] 2021-08-23 21:47:32,358 | DEBUG | pilot.control.job | create_data_payload | will not set job_aborted yet [2021-08-23 17:48:00] 2021-08-23 21:47:32,358 | DEBUG | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished [2021-08-23 17:48:00] 2021-08-23 21:47:32,375 | DEBUG | pilot.control.payload | control | payload control ending since graceful_stop has been set [2021-08-23 17:48:00] 2021-08-23 21:47:32,375 | DEBUG | pilot.control.payload | control | will not set job_aborted yet [2021-08-23 17:48:00] 2021-08-23 21:47:32,376 | DEBUG | pilot.control.payload | control | [payload] control thread has finished [2021-08-23 17:48:00] 2021-08-23 21:47:32,461 | DEBUG | pilot.control.job | validate | will not set job_aborted yet [2021-08-23 17:48:00] 2021-08-23 21:47:32,461 | DEBUG | pilot.control.job | validate | [job] validate thread has finished [2021-08-23 17:48:00] 2021-08-23 21:47:32,473 | DEBUG | pilot.control.payload | validate_pre | will not set job_aborted yet [2021-08-23 17:48:00] 2021-08-23 21:47:32,473 | INFO | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished [2021-08-23 17:48:00] 2021-08-23 21:47:32,491 | DEBUG | pilot.control.data | control | data control ending since graceful_stop has been set [2021-08-23 17:48:00] 2021-08-23 21:47:32,491 | DEBUG | pilot.control.data | control | will not set job_aborted yet [2021-08-23 17:48:00] 2021-08-23 21:47:32,491 | DEBUG | pilot.control.data | control | [data] control thread has finished [2021-08-23 17:48:00] 2021-08-23 21:47:32,786 | DEBUG | pilot.control.data | copytool_out | will not set job_aborted yet [2021-08-23 17:48:00] 2021-08-23 21:47:32,787 | DEBUG | pilot.control.data | copytool_out | [data] copytool_out thread has finished [2021-08-23 17:48:00] 2021-08-23 21:47:32,989 | DEBUG | pilot.control.payload | validate_post | will not set job_aborted yet [2021-08-23 17:48:00] 2021-08-23 21:47:32,989 | INFO | pilot.control.payload | validate_post | [payload] validate_post thread has finished [2021-08-23 17:48:00] 2021-08-23 21:47:33,034 | DEBUG | pilot.control.data | copytool_in | will not set job_aborted yet [2021-08-23 17:48:00] 2021-08-23 21:47:33,035 | DEBUG | pilot.control.data | copytool_in | [data] copytool_in thread has finished [2021-08-23 17:48:00] 2021-08-23 21:47:33,041 | DEBUG | pilot.control.payload | failed_post | will not set job_aborted yet [2021-08-23 17:48:00] 2021-08-23 21:47:33,041 | INFO | pilot.control.payload | failed_post | [payload] failed_post thread has finished [2021-08-23 17:48:00] 2021-08-23 21:47:33,929 | WARNING | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration [2021-08-23 17:48:00] 2021-08-23 21:47:33,929 | DEBUG | pilot.control.job | queue_monitor | will not set job_aborted yet [2021-08-23 17:48:00] 2021-08-23 21:47:33,930 | DEBUG | pilot.control.job | queue_monitor | [job] queue monitor thread has finished [2021-08-23 17:48:00] 2021-08-23 21:47:34,930 | DEBUG | pilot.control.data | queue_monitoring | will not set job_aborted yet [2021-08-23 17:48:00] 2021-08-23 21:47:34,930 | DEBUG | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished [2021-08-23 17:48:00] 2021-08-23 21:48:00,110 | WARNING | pilot.control.job | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 62 s) [2021-08-23 17:48:00] 2021-08-23 21:48:00,110 | DEBUG | pilot.util.processes | threads_aborted | aborting since the last relevant thread is about to finish [2021-08-23 17:48:00] 2021-08-23 21:48:00,110 | DEBUG | pilot.control.job | job_monitor | will proceed to set job_aborted [2021-08-23 17:48:00] 2021-08-23 21:48:00,110 | DEBUG | pilot.control.job | job_monitor | [job] job monitor thread has finished [2021-08-23 17:48:00] 2021-08-23 21:48:00,599 | INFO | pilot.workflow.generic | run | end of generic workflow (traces error code: 0) [2021-08-23 17:48:00] 2021-08-23 21:48:00,599 | INFO | root | wrap_up | traces error code: 0 [2021-08-23 17:48:00] 2021-08-23 21:48:00,600 | INFO | root | wrap_up | pilot has finished [2021-08-23 17:48:00] 2021-08-23 21:48:00,655 [wrapper] ==== pilot stdout END ==== [2021-08-23 17:48:00] 2021-08-23 21:48:00,664 [wrapper] ==== wrapper stdout RESUME ==== [2021-08-23 17:48:00] 2021-08-23 21:48:00,672 [wrapper] Pilot exit status: 0 [2021-08-23 17:48:00] 2021-08-23 21:48:00,700 [wrapper] pandaids: 5163567418 [2021-08-23 17:48:00] 2021-08-23 21:48:00,717 [wrapper] apfmon messages muted [2021-08-23 17:48:00] 2021-08-23 21:48:00,725 [wrapper] Test setup, not cleaning [2021-08-23 17:48:00] 2021-08-23 21:48:00,734 [wrapper] ==== wrapper stdout END ==== [2021-08-23 17:48:00] 2021-08-23 21:48:00,743 [wrapper] ==== wrapper stderr END ==== [2021-08-23 17:48:00] 2021-08-23 21:48:00,760 [wrapper] wrapperexiting ec=0, duration=507 [2021-08-23 17:48:00] 2021-08-23 21:48:00,770 [wrapper] apfmon messages muted [2021-08-23 17:48:00] *** Error codes and diagnostics *** [2021-08-23 17:48:00] "exeErrorCode": 0, [2021-08-23 17:48:00] "exeErrorDiag": "", [2021-08-23 17:48:00] "pilotErrorCode": 0, [2021-08-23 17:48:00] "pilotErrorDiag": "", [2021-08-23 17:48:00] *** Listing of results directory *** [2021-08-23 17:48:00] total 43484 [2021-08-23 17:48:00] -rw-r--r-- 1 boinc boinc 340725 Aug 23 14:22 pilot2.tar.gz [2021-08-23 17:48:00] -rwx------ 1 boinc boinc 20633 Aug 23 15:26 runpilot2-wrapper.sh [2021-08-23 17:48:00] -rw-r--r-- 1 boinc boinc 3214 Aug 23 15:26 queuedata.json [2021-08-23 17:48:00] -rw-r--r-- 1 boinc boinc 107 Aug 23 17:39 wrapper_26015_x86_64-pc-linux-gnu [2021-08-23 17:48:00] -rwxr-xr-x 1 boinc boinc 6966 Aug 23 17:39 run_atlas [2021-08-23 17:48:00] -rw-r--r-- 1 boinc boinc 112 Aug 23 17:39 job.xml [2021-08-23 17:48:00] drwxrwx--x 2 boinc boinc 4096 Aug 23 17:39 shared [2021-08-23 17:48:00] -rw-r--r-- 1 boinc boinc 9083 Aug 23 17:39 init_data.xml [2021-08-23 17:48:00] -rw-r--r-- 1 boinc boinc 0 Aug 23 17:39 boinc_lockfile [2021-08-23 17:48:00] -rw-r--r-- 1 boinc boinc 16551 Aug 23 17:39 start_atlas.sh [2021-08-23 17:48:00] -rw-r--r-- 1 boinc boinc 350487 Aug 23 17:39 input.tar.gz [2021-08-23 17:48:00] -rw-r--r-- 1 boinc boinc 37438704 Aug 23 17:39 EVNT.04972714._000033.pool.root.1 [2021-08-23 17:48:00] -rw-r--r-- 1 boinc boinc 2612 Aug 23 17:39 pandaJob.out [2021-08-23 17:48:00] -rw------- 1 boinc boinc 463 Aug 23 17:39 setup.sh.local [2021-08-23 17:48:00] -rw------- 1 boinc boinc 1079489 Aug 23 17:39 agis_schedconf.cvmfs.json [2021-08-23 17:48:00] -rw------- 1 boinc boinc 1949854 Aug 23 17:39 cric_ddmendpoints.json [2021-08-23 17:48:00] drwx------ 4 boinc boinc 4096 Aug 23 17:39 pilot2 [2021-08-23 17:48:00] -rw------- 1 boinc boinc 1260388 Aug 23 17:46 output.1.c333f4f2-a6de-4bde-8eeb-6aa9a47047a8_25741.pool.root [2021-08-23 17:48:00] -rw-r--r-- 1 boinc boinc 532 Aug 23 17:46 boinc_task_state.xml [2021-08-23 17:48:00] -rw------- 1 boinc boinc 286 Aug 23 17:47 memory_monitor_summary.json [2021-08-23 17:48:00] -rw------- 1 boinc boinc 154783 Aug 23 17:47 c333f4f2-a6de-4bde-8eeb-6aa9a47047a8_25741.1.job.log.tgz [2021-08-23 17:48:00] -rw------- 1 boinc boinc 6833 Aug 23 17:47 heartbeat.json [2021-08-23 17:48:00] -rw-r--r-- 1 boinc boinc 8192 Aug 23 17:47 boinc_mmap_file [2021-08-23 17:48:00] -rw-r--r-- 1 boinc boinc 24 Aug 23 17:48 wrapper_checkpoint.txt [2021-08-23 17:48:00] -rw------- 1 boinc boinc 7522 Aug 23 17:48 pilotlog.txt [2021-08-23 17:48:00] -rw------- 1 boinc boinc 154955 Aug 23 17:48 c333f4f2-a6de-4bde-8eeb-6aa9a47047a8_25741.1.job.log [2021-08-23 17:48:00] -rw------- 1 boinc boinc 536 Aug 23 17:48 output.list [2021-08-23 17:48:00] -rw------- 1 boinc boinc 556 Aug 23 17:48 RyWLDmrlUczn7Olcko1bjSoqABFKDmABFKDmumdXDmvxGKDmXxV8zm.diag [2021-08-23 17:48:00] -rw-r--r-- 1 boinc boinc 10927 Aug 23 17:48 runtime_log.err [2021-08-23 17:48:00] -rw-r--r-- 1 boinc boinc 748 Aug 23 17:48 runtime_log [2021-08-23 17:48:00] -rw------- 1 boinc boinc 1587200 Aug 23 17:48 result.tar.gz [2021-08-23 17:48:00] -rw-r--r-- 1 boinc boinc 28980 Aug 23 17:48 stderr.txt [2021-08-23 17:48:00] HITS file was successfully produced: [2021-08-23 17:48:00] -rw------- 1 boinc boinc 1260388 Aug 23 17:46 shared/HITS.pool.root.1 [2021-08-23 17:48:00] *** Contents of shared directory: *** [2021-08-23 17:48:00] total 39712 [2021-08-23 17:48:00] -rw-r--r-- 1 boinc boinc 37438704 Aug 23 17:39 ATLAS.root_0 [2021-08-23 17:48:00] -rw-r--r-- 1 boinc boinc 16551 Aug 23 17:39 start_atlas.sh [2021-08-23 17:48:00] -rw-r--r-- 1 boinc boinc 350487 Aug 23 17:39 input.tar.gz [2021-08-23 17:48:00] -rw------- 1 boinc boinc 1260388 Aug 23 17:46 HITS.pool.root.1 [2021-08-23 17:48:00] -rw------- 1 boinc boinc 1587200 Aug 23 17:48 result.tar.gz 17:48:02 (1407028): run_atlas exited; CPU time 317.862682 17:48:02 (1407028): called boinc_finish(0) </stderr_txt> ]]>
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