Name t6uNDmp2snzn7Olcko1bjSoqABFKDmABFKDmZr2WDmLJFKDm8NmPon_0
Workunit 2130985
Created 24 Sep 2021, 5:35:22 UTC
Sent 24 Sep 2021, 5:39:02 UTC
Report deadline 1 Oct 2021, 5:39:02 UTC
Received 24 Sep 2021, 7:07:29 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4357
Run time 56 min 51 sec
CPU time 7 min 48 sec
Validate state Valid
Credit 30.71
Device peak FLOPS 6.11 GFLOPS
Application version ATLAS Simulation v1.04 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 2.52 GB
Peak swap size 28.42 GB
Peak disk usage 83.11 MB

Stderr output

<core_client_version>7.9.3</core_client_version>
<![CDATA[
<stderr_txt>
01:52:26 (44763): wrapper (7.7.26015): starting
01:52:26 (44763): wrapper: running run_atlas (--nthreads 2)
[2021-09-24 01:52:26] Arguments: --nthreads 2
[2021-09-24 01:52:26] Threads: 2
[2021-09-24 01:52:26] Checking for CVMFS
[2021-09-24 01:52:28] Probing /cvmfs/atlas.cern.ch... OK
[2021-09-24 01:52:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2021-09-24 01:52:28] Running cvmfs_config stat atlas.cern.ch
[2021-09-24 01:52:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2021-09-24 01:52:30] 2.9.0.0 147949 4550 68184 92714 3 88 2143042 4194305 7252 130560 0 38073924 99.990 406046 842 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 0
[2021-09-24 01:52:30] CVMFS is ok
[2021-09-24 01:52:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2021-09-24 01:52:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2021-09-24 01:52:30] Small home clusters do not require a local http proxy but it is suggested if
[2021-09-24 01:52:30] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2021-09-24 01:52:30] Further information can be found at the LHC@home message board.
[2021-09-24 01:52:30] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2021-09-24 01:52:30] Checking for singularity binary...
[2021-09-24 01:52:30] Using singularity found in PATH at /usr/local/bin/singularity
[2021-09-24 01:52:30] Running /usr/local/bin/singularity --version
[2021-09-24 01:52:30] singularity version 3.7.2+10-ga969f0f8c
[2021-09-24 01:52:30] Checking singularity works with /usr/local/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2021-09-24 01:52:32] E5-2670
[2021-09-24 01:52:32] Singularity works
[2021-09-24 01:52:32] Set ATHENA_PROC_NUMBER=2
[2021-09-24 01:52:32] Starting ATLAS job with PandaID=5200391514
[2021-09-24 01:52:32] Running command: /usr/local/bin/singularity exec --pwd /var/lib/boinc-client/slots/11 -B /cvmfs,/var /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2021-09-24 02:49:14]  *** The last 200 lines of the pilot log: ***
[2021-09-24 02:49:14] 2021-09-24 06:48:06,064 | INFO     | trying to use copytool=mv for activity=['pw', 'w', 'default']
[2021-09-24 02:49:14] 2021-09-24 06:48:06,481 | INFO     | Resolved protocol to be used for transfer: '{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}': l
[2021-09-24 02:49:14] 2021-09-24 06:48:06,481 | INFO     | ready to transfer (stage-out) files: [ accessmode=
[2021-09-24 02:49:14]  activity=['pw', 'w', 'default']
[2021-09-24 02:49:14]  allow_lan=True
[2021-09-24 02:49:14]  allow_wan=False
[2021-09-24 02:49:14]  checksum={'adler32': '016b443a'}
[2021-09-24 02:49:14]  dataset=hc_test.gangarbt.hc20213619.tid1109.BOINC-TEST.164
[2021-09-24 02:49:14]  ddm_activity=<filter object at 0x7fd47f2bf2d0>
[2021-09-24 02:49:14]  ddmendpoint=NDGF-T1_DATADISK
[2021-09-24 02:49:14]  direct_access_lan=False
[2021-09-24 02:49:14]  direct_access_wan=False
[2021-09-24 02:49:14]  domain=
[2021-09-24 02:49:14]  filesize=1448327
[2021-09-24 02:49:14]  filetype=output
[2021-09-24 02:49:14]  guid=2E1E42DF-C077-F841-AB31-F3C5DDF29FFE
[2021-09-24 02:49:14]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2021-09-24 02:49:14]  is_tar=False
[2021-09-24 02:49:14]  lfn=Hits.hc_20213619.BOINC-TEST.9b6c4707-b64a-4bd9-ac16-1cd3d64a23c4_63138.HITS.pool.root
[2021-09-24 02:49:14]  mtime=0
[2021-09-24 02:49:14]  protocol_id=None
[2021-09-24 02:49:14]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}, {'endpoint': 'srm://srm.ndgf.org:8443/srm/managerv2?SFN=', 'flavour': '
[2021-09-24 02:49:14]  replicas=None
[2021-09-24 02:49:14]  scope=hc_test
[2021-09-24 02:49:14]  status=None
[2021-09-24 02:49:14]  status_code=0
[2021-09-24 02:49:14]  storage_token=
[2021-09-24 02:49:14]  surl=/var/lib/boinc-client/slots/11/PanDA_Pilot-5200391514/Hits.hc_20213619.BOINC-TEST.9b6c4707-b64a-4bd9-ac16-1cd3d64a23c4_63138.HITS.pool.root
[2021-09-24 02:49:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/c2/d8/Hits.hc_20213619.BOINC-TEST.9b6c4707-b64a-4bd9-ac16-1cd3d64a23c4_63138.HITS.pool.root
[2021-09-24 02:49:14]  workdir=None
[2021-09-24 02:49:14] ]
[2021-09-24 02:49:14] 2021-09-24 06:48:06,716 | INFO     | transferring file Hits.hc_20213619.BOINC-TEST.9b6c4707-b64a-4bd9-ac16-1cd3d64a23c4_63138.HITS.pool.root from /var/lib/boinc-client/slots/11/PanDA_Pilot-5200391514/
[2021-09-24 02:49:14] 2021-09-24 06:48:06,716 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/11/PanDA_Pilot-5200391514/Hits.hc_20213619.BOINC-TEST.9b6c4707-b64a-4bd9-ac16-1cd3d64a23c4_63138.HIT
[2021-09-24 02:49:14] 2021-09-24 06:48:07,106 | INFO     | Adding to output.list: Hits.hc_20213619.BOINC-TEST.9b6c4707-b64a-4bd9-ac16-1cd3d64a23c4_63138.HITS.pool.root davs://dav.ndgf.org:443;autodir=no;spacetoken=ATLASDAT
[2021-09-24 02:49:14] 2021-09-24 06:48:07,113 | INFO     | executing command: ps aux -q 53332
[2021-09-24 02:49:14] 2021-09-24 06:48:07,409 | INFO     | summary of transferred files:
[2021-09-24 02:49:14] 2021-09-24 06:48:07,410 | INFO     |  -- lfn=Hits.hc_20213619.BOINC-TEST.9b6c4707-b64a-4bd9-ac16-1cd3d64a23c4_63138.HITS.pool.root, status_code=0, status=transferred
[2021-09-24 02:49:14] 2021-09-24 06:48:07,410 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/11/PanDA_Pilot-5200391514
[2021-09-24 02:49:14] 2021-09-24 06:48:07,965 | WARNING  | failed to remove directory: /var/lib/boinc-client/slots/11/PanDA_Pilot-5200391514/Hits.hc_20213619.BOINC-TEST.9b6c4707-b64a-4bd9-ac16-1cd3d64a23c4_63138.HITS.pool.
[2021-09-24 02:49:14] 2021-09-24 06:48:07,965 | WARNING  | failed to remove directory: /var/lib/boinc-client/slots/11/PanDA_Pilot-5200391514/Hits.hc_20213619.BOINC-TEST.9b6c4707-b64a-4bd9-ac16-1cd3d64a23c4_63138.HITS.pool.
[2021-09-24 02:49:14] 2021-09-24 06:48:07,967 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/11/PanDA_Pilot-5200391514
[2021-09-24 02:49:14] 2021-09-24 06:48:08,149 | INFO     | will create archive /var/lib/boinc-client/slots/11/tarball_PandaJob_5200391514_BOINC-TEST/9b6c4707-b64a-4bd9-ac16-1cd3d64a23c4_63138.job.log.tgz
[2021-09-24 02:49:14] 2021-09-24 06:48:08,150 | INFO     | executing command: pwd;tar cvfz /var/lib/boinc-client/slots/11/tarball_PandaJob_5200391514_BOINC-TEST/9b6c4707-b64a-4bd9-ac16-1cd3d64a23c4_63138.job.log.tgz tarbal
[2021-09-24 02:49:14] 2021-09-24 06:48:08,849 | INFO     | prepare to stage-out 1 log file(s)
[2021-09-24 02:49:14] 2021-09-24 06:48:08,849 | INFO     | stage-out will not be done in a container
[2021-09-24 02:49:14] 2021-09-24 06:48:08,850 | INFO     | configured copytools per activity: acopytools={'pr': ['mv'], 'pw': ['mv'], 'read_lan': ['mv'], 'write_lan': ['mv'], 'default': ['rucio']}
[2021-09-24 02:49:14] 2021-09-24 06:48:08,850 | INFO     | [prepare_destinations][pl]: allowed (local) destinations: ['NDGF-T1_DATADISK']
[2021-09-24 02:49:14] 2021-09-24 06:48:08,850 | INFO     | [prepare_destinations][pl]: resolved default destination ddm=NDGF-T1_DATADISK
[2021-09-24 02:49:14] 2021-09-24 06:48:08,851 | INFO     | trying to use copytool=mv for activity=['pl', 'pw', 'w', 'default']
[2021-09-24 02:49:14] 2021-09-24 06:48:09,261 | INFO     | Resolved protocol to be used for transfer: '{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}': l
[2021-09-24 02:49:14] 2021-09-24 06:48:09,262 | INFO     | ready to transfer (stage-out) files: [ accessmode=
[2021-09-24 02:49:14]  activity=['pl', 'pw', 'w', 'default']
[2021-09-24 02:49:14]  allow_lan=True
[2021-09-24 02:49:14]  allow_wan=False
[2021-09-24 02:49:14]  checksum={'adler32': 'c4ef46d1'}
[2021-09-24 02:49:14]  dataset=hc_test.gangarbt.hc20213619.tid1109.BOINC-TEST.164
[2021-09-24 02:49:14]  ddm_activity=<filter object at 0x7fd47f363950>
[2021-09-24 02:49:14]  ddmendpoint=NDGF-T1_DATADISK
[2021-09-24 02:49:14]  direct_access_lan=False
[2021-09-24 02:49:14]  direct_access_wan=False
[2021-09-24 02:49:14]  domain=
[2021-09-24 02:49:14]  filesize=546264
[2021-09-24 02:49:14]  filetype=log
[2021-09-24 02:49:14]  guid=a94a9ca4-a0bc-4b49-8114-ec8547e04c37
[2021-09-24 02:49:14]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2021-09-24 02:49:14]  is_tar=False
[2021-09-24 02:49:14]  lfn=9b6c4707-b64a-4bd9-ac16-1cd3d64a23c4_63138.job.log.tgz
[2021-09-24 02:49:14]  mtime=0
[2021-09-24 02:49:14]  protocol_id=None
[2021-09-24 02:49:14]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}, {'endpoint': 'srm://srm.ndgf.org:8443/srm/managerv2?SFN=', 'flavour': '
[2021-09-24 02:49:14]  replicas=None
[2021-09-24 02:49:14]  scope=hc_test
[2021-09-24 02:49:14]  status=None
[2021-09-24 02:49:14]  status_code=0
[2021-09-24 02:49:14]  storage_token=
[2021-09-24 02:49:14]  surl=/var/lib/boinc-client/slots/11/PanDA_Pilot-5200391514/9b6c4707-b64a-4bd9-ac16-1cd3d64a23c4_63138.job.log.tgz
[2021-09-24 02:49:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/1e/f0/9b6c4707-b64a-4bd9-ac16-1cd3d64a23c4_63138.job.log.tgz
[2021-09-24 02:49:14]  workdir=None
[2021-09-24 02:49:14] ]
[2021-09-24 02:49:14] 2021-09-24 06:48:09,459 | INFO     | transferring file 9b6c4707-b64a-4bd9-ac16-1cd3d64a23c4_63138.job.log.tgz from /var/lib/boinc-client/slots/11/PanDA_Pilot-5200391514/9b6c4707-b64a-4bd9-ac16-1cd3d64
[2021-09-24 02:49:14] 2021-09-24 06:48:09,459 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/11/PanDA_Pilot-5200391514/9b6c4707-b64a-4bd9-ac16-1cd3d64a23c4_63138.job.log.tgz /var/lib/boinc-clie
[2021-09-24 02:49:14] 2021-09-24 06:48:09,854 | INFO     | Adding to output.list: 9b6c4707-b64a-4bd9-ac16-1cd3d64a23c4_63138.job.log.tgz davs://dav.ndgf.org:443;autodir=no;spacetoken=ATLASDATADISK/atlas/disk/atlasdatadisk/
[2021-09-24 02:49:14] 2021-09-24 06:48:09,855 | INFO     | executing command: ps aux -q 53332
[2021-09-24 02:49:14] 2021-09-24 06:48:10,421 | INFO     | summary of transferred files:
[2021-09-24 02:49:14] 2021-09-24 06:48:10,422 | INFO     |  -- lfn=9b6c4707-b64a-4bd9-ac16-1cd3d64a23c4_63138.job.log.tgz, status_code=0, status=transferred
[2021-09-24 02:49:14] 2021-09-24 06:48:10,422 | INFO     | stage-out finished correctly
[2021-09-24 02:49:14] 2021-09-24 06:48:13,473 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2021-09-24 02:49:14] 2021-09-24 06:48:14,529 | INFO     | job 5200391514 has state=finished
[2021-09-24 02:49:14] 2021-09-24 06:48:14,529 | INFO     | preparing for final server update for job 5200391514 in state='finished'
[2021-09-24 02:49:14] 2021-09-24 06:48:14,530 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2021-09-24 02:49:14] 2021-09-24 06:48:14,530 | INFO     | job 5200391514 has finished - writing final server update
[2021-09-24 02:49:14] 2021-09-24 06:48:14,530 | INFO     | will not add max space = -33815841 B to job metrics
[2021-09-24 02:49:14] 2021-09-24 06:48:14,531 | INFO     | fitting pss+swap vs Time
[2021-09-24 02:49:14] 2021-09-24 06:48:14,532 | INFO     | current memory leak: 186.48 B/s (using 36 data points, chi2=22645899)
[2021-09-24 02:49:14] 2021-09-24 06:48:14,532 | INFO     | mean actualcorecount: 4.441176
[2021-09-24 02:49:14] 2021-09-24 06:48:14,532 | INFO     | total number of processed events: 2 (read)
[2021-09-24 02:49:14] 2021-09-24 06:48:14,558 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2021-09-24 02:49:14] 2021-09-24 06:48:15,154 | INFO     | using path: /var/lib/boinc-client/slots/11/PanDA_Pilot-5200391514/memory_monitor_summary.json (trf name=prmon)
[2021-09-24 02:49:14] 2021-09-24 06:48:15,156 | INFO     | extracted standard info from prmon json
[2021-09-24 02:49:14] 2021-09-24 06:48:15,156 | INFO     | extracted standard memory fields from prmon json
[2021-09-24 02:49:14] 2021-09-24 06:48:15,156 | INFO     | ..............................
[2021-09-24 02:49:14] 2021-09-24 06:48:15,156 | INFO     | . Timing measurements:
[2021-09-24 02:49:14] 2021-09-24 06:48:15,161 | INFO     | . get job = 0 s
[2021-09-24 02:49:14] 2021-09-24 06:48:15,161 | INFO     | . initial setup = 5 s
[2021-09-24 02:49:14] 2021-09-24 06:48:15,161 | INFO     | . payload setup = 191 s
[2021-09-24 02:49:14] 2021-09-24 06:48:15,161 | INFO     | . total setup = 196 s
[2021-09-24 02:49:14] 2021-09-24 06:48:15,161 | INFO     | . stage-in = 2 s
[2021-09-24 02:49:14] 2021-09-24 06:48:15,161 | INFO     | . payload execution = 2762 s
[2021-09-24 02:49:14] 2021-09-24 06:48:15,161 | INFO     | . stage-out = 4 s
[2021-09-24 02:49:14] 2021-09-24 06:48:15,161 | INFO     | ..............................
[2021-09-24 02:49:14] 2021-09-24 06:48:15,613 | INFO     | 
[2021-09-24 02:49:14] 2021-09-24 06:48:15,613 | INFO     | job summary report
[2021-09-24 02:49:14] 2021-09-24 06:48:15,613 | INFO     | --------------------------------------------------
[2021-09-24 02:49:14] 2021-09-24 06:48:15,617 | INFO     | PanDA job id: 5200391514
[2021-09-24 02:49:14] 2021-09-24 06:48:15,617 | INFO     | task id: NULL
[2021-09-24 02:49:14] 2021-09-24 06:48:15,617 | INFO     | errors: (none)
[2021-09-24 02:49:14] 2021-09-24 06:48:15,617 | INFO     | status: LOG_TRANSFER = DONE 
[2021-09-24 02:49:14] 2021-09-24 06:48:15,617 | INFO     | pilot state: finished 
[2021-09-24 02:49:14] 2021-09-24 06:48:15,618 | INFO     | transexitcode: 0
[2021-09-24 02:49:14] 2021-09-24 06:48:15,618 | INFO     | exeerrorcode: 0
[2021-09-24 02:49:14] 2021-09-24 06:48:15,618 | INFO     | exeerrordiag: 
[2021-09-24 02:49:14] 2021-09-24 06:48:15,618 | INFO     | exitcode: 0
[2021-09-24 02:49:14] 2021-09-24 06:48:15,618 | INFO     | exitmsg: OK
[2021-09-24 02:49:14] 2021-09-24 06:48:15,618 | INFO     | cpuconsumptiontime: 615 s
[2021-09-24 02:49:14] 2021-09-24 06:48:15,619 | INFO     | nevents: 2
[2021-09-24 02:49:14] 2021-09-24 06:48:15,619 | INFO     | neventsw: 0
[2021-09-24 02:49:14] 2021-09-24 06:48:15,619 | INFO     | pid: 57728
[2021-09-24 02:49:14] 2021-09-24 06:48:15,619 | INFO     | pgrp: 57728
[2021-09-24 02:49:14] 2021-09-24 06:48:15,619 | INFO     | corecount: 2
[2021-09-24 02:49:14] 2021-09-24 06:48:15,619 | INFO     | event service: False
[2021-09-24 02:49:14] 2021-09-24 06:48:15,620 | INFO     | sizes: {17856330: 3885793, 17856331: 3885906, 17856332: 3885906, 17856333: 3886068, 17856335: 3886070, 17856344: 3886126, 17859304: 3913527, 17859305: 3913526, 178
[2021-09-24 02:49:14] 2021-09-24 06:48:15,620 | INFO     | --------------------------------------------------
[2021-09-24 02:49:14] 2021-09-24 06:48:15,620 | INFO     | 
[2021-09-24 02:49:14] 2021-09-24 06:48:15,620 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/11
[2021-09-24 02:49:14] 2021-09-24 06:48:16,274 | INFO     | queue jobs has 0 job(s)
[2021-09-24 02:49:14] 2021-09-24 06:48:16,274 | INFO     | queue payloads has 0 job(s)
[2021-09-24 02:49:14] 2021-09-24 06:48:16,274 | INFO     | queue data_in has 0 job(s)
[2021-09-24 02:49:14] 2021-09-24 06:48:16,275 | INFO     | queue data_out has 0 job(s)
[2021-09-24 02:49:14] 2021-09-24 06:48:16,275 | INFO     | queue current_data_in has 0 job(s)
[2021-09-24 02:49:14] 2021-09-24 06:48:16,275 | INFO     | queue validated_jobs has 0 job(s)
[2021-09-24 02:49:14] 2021-09-24 06:48:16,275 | INFO     | queue validated_payloads has 0 job(s)
[2021-09-24 02:49:14] 2021-09-24 06:48:16,275 | INFO     | queue monitored_payloads has 0 job(s)
[2021-09-24 02:49:14] 2021-09-24 06:48:16,275 | INFO     | queue finished_jobs has 0 job(s)
[2021-09-24 02:49:14] 2021-09-24 06:48:16,275 | INFO     | queue finished_payloads has 0 job(s)
[2021-09-24 02:49:14] 2021-09-24 06:48:16,293 | INFO     | queue finished_data_in has 1 job(s)
[2021-09-24 02:49:14] 2021-09-24 06:48:16,297 | INFO     | queue finished_data_out has 0 job(s)
[2021-09-24 02:49:14] 2021-09-24 06:48:16,297 | INFO     | queue failed_jobs has 0 job(s)
[2021-09-24 02:49:14] 2021-09-24 06:48:16,297 | INFO     | queue failed_payloads has 0 job(s)
[2021-09-24 02:49:14] 2021-09-24 06:48:16,297 | INFO     | queue failed_data_in has 0 job(s)
[2021-09-24 02:49:14] 2021-09-24 06:48:16,297 | INFO     | queue failed_data_out has 0 job(s)
[2021-09-24 02:49:14] 2021-09-24 06:48:16,297 | INFO     | queue completed_jobs has 0 job(s)
[2021-09-24 02:49:14] 2021-09-24 06:48:16,297 | INFO     | queue completed_jobids has 1 job(s)
[2021-09-24 02:49:14] 2021-09-24 06:48:16,298 | INFO     | job 5200391514 has completed (purged errors)
[2021-09-24 02:49:14] 2021-09-24 06:48:16,298 | INFO     | overall cleanup function is called
[2021-09-24 02:49:14] 2021-09-24 06:48:17,309 | INFO     | --- collectZombieJob: --- 10, [57728]
[2021-09-24 02:49:14] 2021-09-24 06:48:17,313 | INFO     | zombie collector trying to kill pid 57728
[2021-09-24 02:49:14] 2021-09-24 06:48:17,317 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2021-09-24 02:49:14] 2021-09-24 06:48:18,325 | INFO     | collected zombie processes
[2021-09-24 02:49:14] 2021-09-24 06:48:18,325 | INFO     | will now attempt to kill all subprocesses of pid=57728
[2021-09-24 02:49:14] 2021-09-24 06:48:18,896 | INFO     | process IDs to be killed: [57728] (in reverse order)
[2021-09-24 02:49:14] 2021-09-24 06:48:19,376 | WARNING  | found no corresponding commands to process id(s)
[2021-09-24 02:49:14] 2021-09-24 06:48:19,385 | INFO     | Do not look for orphan processes in BOINC jobs
[2021-09-24 02:49:14] 2021-09-24 06:48:19,385 | INFO     | ready for new job
[2021-09-24 02:49:14] 2021-09-24 06:48:19,385 | INFO     | pilot has finished for previous job - re-establishing logging
[2021-09-24 02:49:14] 2021-09-24 06:48:19,386 | INFO     | ****************************************
[2021-09-24 02:49:14] 2021-09-24 06:48:19,387 | INFO     | ***  PanDA Pilot version 2.12.6 (1)  ***
[2021-09-24 02:49:14] 2021-09-24 06:48:19,387 | INFO     | ****************************************
[2021-09-24 02:49:14] 2021-09-24 06:48:19,387 | INFO     | 
[2021-09-24 02:49:14] 2021-09-24 06:48:19,410 | INFO     | architecture information:
[2021-09-24 02:49:14] 2021-09-24 06:48:22,206 | INFO     | 
[2021-09-24 02:49:14] LSB Version:	:core-4.1-amd64:core-4.1-noarch
[2021-09-24 02:49:14] Distributor ID:	CentOS
[2021-09-24 02:49:14] Description:	CentOS Linux release 7.8.2003 (Core)
[2021-09-24 02:49:14] Release:	7.8.2003
[2021-09-24 02:49:14] Codename:	Core
[2021-09-24 02:49:14] 2021-09-24 06:48:22,217 | INFO     | ****************************************
[2021-09-24 02:49:14] 2021-09-24 06:48:23,049 | INFO     | sufficient remaining disk space (40971010048 B)
[2021-09-24 02:49:14] 2021-09-24 06:48:23,049 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2021-09-24 02:49:14] 2021-09-24 06:48:23,249 | INFO     | [payload] validate_pre thread has finished
[2021-09-24 02:49:14] 2021-09-24 06:48:23,761 | INFO     | [monitor] control thread has ended
[2021-09-24 02:49:14] 2021-09-24 06:48:23,829 | INFO     | [payload] execute_payloads thread has finished
[2021-09-24 02:49:14] 2021-09-24 06:48:23,974 | INFO     | [payload] failed_post thread has finished
[2021-09-24 02:49:14] 2021-09-24 06:48:24,057 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2021-09-24 02:49:14] 2021-09-24 06:48:24,197 | INFO     | [payload] validate_post thread has finished
[2021-09-24 02:49:14] 2021-09-24 06:48:24,449 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2021-09-24 02:49:14] 2021-09-24 06:48:24,649 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2021-09-24 02:49:14] 2021-09-24 06:49:11,149 | WARNING  | no jobs in monitored_payloads queue (waited for 77 s)
[2021-09-24 02:49:14] 2021-09-24 06:49:11,245 | INFO     | end of generic workflow (traces error code: 0)
[2021-09-24 02:49:14] 2021-09-24 06:49:11,245 | INFO     | traces error code: 0
[2021-09-24 02:49:14] 2021-09-24 06:49:11,245 | INFO     | pilot has finished
[2021-09-24 02:49:14] 2021-09-24 06:49:11,441 [wrapper] ==== pilot stdout END ====
[2021-09-24 02:49:14] 2021-09-24 06:49:11,601 [wrapper] ==== wrapper stdout RESUME ====
[2021-09-24 02:49:14] 2021-09-24 06:49:11,813 [wrapper] Pilot exit status: 0
[2021-09-24 02:49:14] 2021-09-24 06:49:12,273 [wrapper] pandaids: 5200391514
[2021-09-24 02:49:14] 2021-09-24 06:49:12,521 [wrapper] apfmon messages muted
[2021-09-24 02:49:14] 2021-09-24 06:49:12,685 [wrapper] Test setup, not cleaning
[2021-09-24 02:49:14] 2021-09-24 06:49:12,881 [wrapper] ==== wrapper stdout END ====
[2021-09-24 02:49:14] 2021-09-24 06:49:12,992 [wrapper] ==== wrapper stderr END ====
[2021-09-24 02:49:14] 2021-09-24 06:49:13,157 [wrapper] wrapperexiting ec=0, duration=3396
[2021-09-24 02:49:14] 2021-09-24 06:49:13,301 [wrapper] apfmon messages muted
[2021-09-24 02:49:14]  *** Error codes and diagnostics ***
[2021-09-24 02:49:14]     "exeErrorCode": 0,
[2021-09-24 02:49:14]     "exeErrorDiag": "",
[2021-09-24 02:49:14]     "pilotErrorCode": 0,
[2021-09-24 02:49:14]     "pilotErrorDiag": "",
[2021-09-24 02:49:14]  *** Listing of results directory ***
[2021-09-24 02:49:14] total 43912
[2021-09-24 02:49:14] -rw-r--r-- 1 boinc boinc   344681 Sep 24 01:28 pilot2.tar.gz
[2021-09-24 02:49:14] -rwx------ 1 boinc boinc    20816 Sep 24 01:35 runpilot2-wrapper.sh
[2021-09-24 02:49:14] -rw-r--r-- 1 boinc boinc     3214 Sep 24 01:35 queuedata.json
[2021-09-24 02:49:14] -rw-r--r-- 1 boinc boinc      107 Sep 24 01:52 wrapper_26015_x86_64-pc-linux-gnu
[2021-09-24 02:49:14] -rwxr-xr-x 1 boinc boinc     6966 Sep 24 01:52 run_atlas
[2021-09-24 02:49:14] -rw-r--r-- 1 boinc boinc      112 Sep 24 01:52 job.xml
[2021-09-24 02:49:14] drwxrwx--x 2 boinc boinc     4096 Sep 24 01:52 shared
[2021-09-24 02:49:14] -rw-r--r-- 1 boinc boinc     6167 Sep 24 01:52 init_data.xml
[2021-09-24 02:49:14] -rw-r--r-- 1 boinc boinc        0 Sep 24 01:52 boinc_lockfile
[2021-09-24 02:49:14] -rw-r--r-- 1 boinc boinc    16533 Sep 24 01:52 start_atlas.sh
[2021-09-24 02:49:14] -rw-r--r-- 1 boinc boinc   354546 Sep 24 01:52 input.tar.gz
[2021-09-24 02:49:14] -rw-r--r-- 1 boinc boinc 38184411 Sep 24 01:52 EVNT.04972714._000028.pool.root.1
[2021-09-24 02:49:14] -rw-r--r-- 1 boinc boinc     2661 Sep 24 01:52 pandaJob.out
[2021-09-24 02:49:14] -rw------- 1 boinc boinc  1082083 Sep 24 01:58 agis_schedconf.cvmfs.json
[2021-09-24 02:49:14] -rw------- 1 boinc boinc  1944005 Sep 24 01:58 cric_ddmendpoints.json
[2021-09-24 02:49:14] drwx------ 4 boinc boinc     4096 Sep 24 01:58 pilot2
[2021-09-24 02:49:14] -rw-r--r-- 1 boinc boinc      534 Sep 24 02:36 boinc_task_state.xml
[2021-09-24 02:49:14] -rw------- 1 boinc boinc  1448327 Sep 24 02:47 Hits.hc_20213619.BOINC-TEST.9b6c4707-b64a-4bd9-ac16-1cd3d64a23c4_63138.HITS.pool.root
[2021-09-24 02:49:14] -rw------- 1 boinc boinc     1028 Sep 24 02:48 memory_monitor_summary.json
[2021-09-24 02:49:14] -rw------- 1 boinc boinc   546264 Sep 24 02:48 9b6c4707-b64a-4bd9-ac16-1cd3d64a23c4_63138.job.log.tgz
[2021-09-24 02:49:14] -rw------- 1 boinc boinc     8437 Sep 24 02:48 heartbeat.json
[2021-09-24 02:49:14] -rw-r--r-- 1 boinc boinc     8192 Sep 24 02:49 boinc_mmap_file
[2021-09-24 02:49:14] -rw-r--r-- 1 boinc boinc       25 Sep 24 02:49 wrapper_checkpoint.txt
[2021-09-24 02:49:14] -rw------- 1 boinc boinc     1801 Sep 24 02:49 pilotlog.txt
[2021-09-24 02:49:14] -rw------- 1 boinc boinc   148493 Sep 24 02:49 9b6c4707-b64a-4bd9-ac16-1cd3d64a23c4_63138.job.log
[2021-09-24 02:49:14] -rw------- 1 boinc boinc      582 Sep 24 02:49 output.list
[2021-09-24 02:49:14] -rw------- 1 boinc boinc      563 Sep 24 02:49 t6uNDmp2snzn7Olcko1bjSoqABFKDmABFKDmZr2WDmLJFKDm8NmPon.diag
[2021-09-24 02:49:14] -rw-r--r-- 1 boinc boinc     9232 Sep 24 02:49 runtime_log.err
[2021-09-24 02:49:14] -rw-r--r-- 1 boinc boinc      680 Sep 24 02:49 runtime_log
[2021-09-24 02:49:14] -rw------- 1 boinc boinc   716800 Sep 24 02:49 result.tar.gz
[2021-09-24 02:49:14] -rw-r--r-- 1 boinc boinc    21568 Sep 24 02:49 stderr.txt
[2021-09-24 02:49:14] HITS file was successfully produced:
[2021-09-24 02:49:14] -rw------- 1 boinc boinc 1448327 Sep 24 02:47 shared/HITS.pool.root.1
[2021-09-24 02:49:14]  *** Contents of shared directory: ***
[2021-09-24 02:49:14] total 39776
[2021-09-24 02:49:14] -rw-r--r-- 1 boinc boinc    16533 Sep 24 01:52 start_atlas.sh
[2021-09-24 02:49:14] -rw-r--r-- 1 boinc boinc   354546 Sep 24 01:52 input.tar.gz
[2021-09-24 02:49:14] -rw-r--r-- 1 boinc boinc 38184411 Sep 24 01:52 ATLAS.root_0
[2021-09-24 02:49:14] -rw------- 1 boinc boinc  1448327 Sep 24 02:47 HITS.pool.root.1
[2021-09-24 02:49:14] -rw------- 1 boinc boinc   716800 Sep 24 02:49 result.tar.gz
02:49:15 (44763): run_atlas exited; CPU time 468.942600
02:49:15 (44763): called boinc_finish(0)

</stderr_txt>
]]>


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