Name edINDmnK2nzn7Olcko1bjSoqABFKDmABFKDmZr2WDmvJFKDm3CR5bm_0
Workunit 2131092
Created 24 Sep 2021, 15:30:30 UTC
Sent 24 Sep 2021, 15:35:00 UTC
Report deadline 1 Oct 2021, 15:35:00 UTC
Received 24 Sep 2021, 16:38:07 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4433
Run time 19 min 42 sec
CPU time 11 min 54 sec
Validate state Valid
Credit 7.84
Device peak FLOPS 5.33 GFLOPS
Application version ATLAS Simulation v0.84 (vbox64_mt_mcore_atlas)
x86_64-pc-linux-gnu
Peak working set size 425.96 MB
Peak swap size 5.86 GB
Peak disk usage 3.01 GB

Stderr output

<core_client_version>7.9.3</core_client_version>
<![CDATA[
<stderr_txt>
2021-09-24 11:35:32 (5155): vboxwrapper (7.7.26197): starting
2021-09-24 11:35:33 (5155): Feature: Checkpoint interval offset (557 seconds)
2021-09-24 11:35:33 (5155): Detected: VirtualBox VboxManage Interface (Version: 6.1.4)
2021-09-24 11:35:34 (5155): Detected: Minimum checkpoint interval (900.000000 seconds)
2021-09-24 11:35:34 (5155): Successfully copied 'init_data.xml' to the shared directory.
2021-09-24 11:35:35 (5155): Create VM. (boinc_21c246c2f95e681e, slot#13)
2021-09-24 11:35:36 (5155): Setting Memory Size for VM. (3900MB)
2021-09-24 11:35:37 (5155): Setting CPU Count for VM. (1)
2021-09-24 11:35:38 (5155): Setting Chipset Options for VM.
2021-09-24 11:35:39 (5155): Setting Boot Options for VM.
2021-09-24 11:35:39 (5155): Setting Network Configuration for NAT.
2021-09-24 11:35:40 (5155): Enabling VM Network Access.
2021-09-24 11:35:40 (5155): Disabling USB Support for VM.
2021-09-24 11:35:41 (5155): Disabling COM Port Support for VM.
2021-09-24 11:35:41 (5155): Disabling LPT Port Support for VM.
2021-09-24 11:35:42 (5155): Disabling Audio Support for VM.
2021-09-24 11:35:42 (5155): Disabling Clipboard Support for VM.
2021-09-24 11:35:43 (5155): Disabling Drag and Drop Support for VM.
2021-09-24 11:35:43 (5155): Adding storage controller(s) to VM.
2021-09-24 11:35:44 (5155): Adding virtual disk drive to VM. (vm_image.vdi)
2021-09-24 11:35:45 (5155): Adding VirtualBox Guest Additions to VM.
2021-09-24 11:35:45 (5155): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2021-09-24 11:35:46 (5155): forwarding host port 36799 to guest port 80
2021-09-24 11:35:46 (5155): Enabling remote desktop for VM.
2021-09-24 11:35:46 (5155): Required extension pack not installed, remote desktop not enabled.
2021-09-24 11:35:46 (5155): Enabling shared directory for VM.
2021-09-24 11:35:48 (5155): Starting VM. (boinc_21c246c2f95e681e, slot#13)
2021-09-24 11:35:53 (5155): Successfully started VM. (PID = '5793')
2021-09-24 11:35:53 (5155): Reporting VM Process ID to BOINC.
2021-09-24 11:35:54 (5155): Guest Log: BIOS: VirtualBox 6.1.4
2021-09-24 11:35:54 (5155): Guest Log: CPUID EDX: 0x178bfbff
2021-09-24 11:35:54 (5155): Guest Log: BIOS: ata0-0: PCHS=16383/16/63 LCHS=1024/255/63
2021-09-24 11:35:55 (5155): VM state change detected. (old = 'poweroff', new = 'running')
2021-09-24 11:35:55 (5155): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2021-09-24 11:35:55 (5155): Guest Log: BIOS: Booting from Hard Disk...
2021-09-24 11:35:55 (5155): Detected: Web Application Enabled (http://localhost:36799)
2021-09-24 11:35:56 (5155): Preference change detected
2021-09-24 11:35:56 (5155): Setting CPU throttle for VM. (100%)
2021-09-24 11:35:57 (5155): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2021-09-24 11:35:59 (5155): Guest Log: BIOS: KBD: unsupported int 16h function 03
2021-09-24 11:35:59 (5155): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2021-09-24 11:35:59 (5155): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2021-09-24 11:35:59 (5155): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2021-09-24 11:35:59 (5155): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2021-09-24 11:35:59 (5155): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2021-09-24 11:35:59 (5155): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2021-09-24 11:35:59 (5155): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2021-09-24 11:35:59 (5155): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2021-09-24 11:35:59 (5155): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2021-09-24 11:35:59 (5155): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2021-09-24 11:35:59 (5155): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2021-09-24 11:35:59 (5155): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2021-09-24 11:35:59 (5155): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2021-09-24 11:35:59 (5155): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2021-09-24 11:35:59 (5155): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2021-09-24 11:35:59 (5155): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2021-09-24 11:35:59 (5155): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2021-09-24 11:35:59 (5155): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2021-09-24 11:35:59 (5155): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2021-09-24 11:35:59 (5155): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2021-09-24 11:35:59 (5155): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2021-09-24 11:35:59 (5155): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2021-09-24 11:35:59 (5155): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2021-09-24 11:35:59 (5155): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2021-09-24 11:35:59 (5155): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2021-09-24 11:35:59 (5155): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2021-09-24 11:35:59 (5155): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2021-09-24 11:35:59 (5155): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2021-09-24 11:35:59 (5155): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2021-09-24 11:35:59 (5155): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2021-09-24 11:35:59 (5155): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2021-09-24 11:36:01 (5155): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2021-09-24 11:36:01 (5155): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2021-09-24 11:36:05 (5155): Guest Log: Checking CVMFS...
2021-09-24 11:36:05 (5155): Guest Log: Failed to check CVMFS, check output from cvmfs_config probe:
2021-09-24 11:36:05 (5155): Guest Log: Probing /cvmfs/atlas.cern.ch... Failed!
2021-09-24 11:36:05 (5155): Guest Log: Probing /cvmfs/atlas-condb.cern.ch... Failed!
2021-09-24 11:36:08 (5155): Guest Log: Probing /cvmfs/grid.cern.ch... OK
2021-09-24 11:36:10 (5155): Guest Log: Mounting shared directory
2021-09-24 11:36:10 (5155): Guest Log: Copying input files
2021-09-24 11:36:13 (5155): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2021-09-24 11:36:13 (5155): Guest Log: 00:00:00.000186 main     Log opened 2021-09-24T11:36:09.629621000Z
2021-09-24 11:36:13 (5155): Guest Log: 00:00:00.000290 main     OS Product: Linux
2021-09-24 11:36:13 (5155): Guest Log: 00:00:00.000309 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2021-09-24 11:36:13 (5155): Guest Log: 00:00:00.000327 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2021-09-24 11:36:13 (5155): Guest Log: 00:00:00.000341 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2021-09-24 11:36:13 (5155): Guest Log: 00:00:00.000342 main     Process ID: 1771
2021-09-24 11:36:13 (5155): Guest Log: 00:00:00.000342 main     Package type: LINUX_64BITS_GENERIC
2021-09-24 11:36:13 (5155): Guest Log: 00:00:00.008372 main     5.2.32 r132073 started. Verbose level = 0
2021-09-24 11:36:13 (5155): Guest Log: Copied input files into RunAtlas.
2021-09-24 11:36:13 (5155): Guest Log: copied the webapp to /var/www
2021-09-24 11:36:13 (5155): Guest Log: This vm does not need to setup an http proxy
2021-09-24 11:36:13 (5155): Guest Log: core_number=1
2021-09-24 11:36:13 (5155): Guest Log:  *** Starting ATLAS job. (PandaID=5200873375 taskID=NULL&cor) ***
2021-09-24 11:36:22 (5155): Guest Log: 00:00:10.034796 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 618 210 000ns (GuestNow=1 632 497 781 282 208 000 ns GuestLast=1 632 483 369 663 998 000 ns fSetTimeLastLoop=true )
2021-09-24 11:55:02 (5155): Guest Log:  *** Job finished ***
2021-09-24 11:55:02 (5155): Guest Log:  *** The last 20 lines of the pilot log: ***
2021-09-24 11:55:02 (5155): Guest Log:  *** Error codes and diagnostics ***
2021-09-24 11:55:02 (5155): Guest Log:     "exeErrorCode": 0,
2021-09-24 11:55:02 (5155): Guest Log:     "exeErrorDiag": "",
2021-09-24 11:55:02 (5155): Guest Log:     "pilotErrorCode": 0,
2021-09-24 11:55:02 (5155): Guest Log:     "pilotErrorDiag": "",
2021-09-24 11:55:02 (5155): Guest Log:  *** Listing of results directory ***
2021-09-24 11:55:02 (5155): Guest Log: total 7080
2021-09-24 11:55:02 (5155): Guest Log: -rw-r--r--. 1 atlas atlas    8958 Sep 24 11:36 init_data.xml
2021-09-24 11:55:02 (5155): Guest Log: -rw-r--r--. 1 atlas atlas   16541 Sep 24 11:36 start_atlas.sh
2021-09-24 11:55:02 (5155): Guest Log: -rw-r--r--. 1 atlas atlas  354550 Sep 24 11:36 input.tar.gz
2021-09-24 11:55:02 (5155): Guest Log: -rw-r--r--. 1 atlas atlas  344681 Sep 24 15:24 pilot2.tar.gz
2021-09-24 11:55:02 (5155): Guest Log: -rwx------. 1 atlas atlas   20816 Sep 24 15:30 runpilot2-wrapper.sh
2021-09-24 11:55:02 (5155): Guest Log: -rw-r--r--. 1 atlas atlas    3214 Sep 24 15:30 queuedata.json
2021-09-24 11:55:02 (5155): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Sep 24 15:36 EVNT.04972714._000028.pool.root.1 -> /data/./ATLAS.root_0
2021-09-24 11:55:02 (5155): Guest Log: -rw-r--r--. 1 atlas atlas    2616 Sep 24 15:36 pandaJob.out
2021-09-24 11:55:02 (5155): Guest Log: -rw-------. 1 atlas atlas 1082137 Sep 24 15:37 agis_schedconf.cvmfs.json
2021-09-24 11:55:02 (5155): Guest Log: -rw-------. 1 atlas atlas 1944005 Sep 24 15:37 cric_ddmendpoints.json
2021-09-24 11:55:02 (5155): Guest Log: drwx------. 4 atlas atlas     260 Sep 24 15:37 pilot2
2021-09-24 11:55:02 (5155): Guest Log: -rw-------. 1 atlas atlas 1433867 Sep 24 15:54 output.1.f68d3ab8-f88d-49f0-8aa2-e89551483f88_96666.pool.root
2021-09-24 11:55:02 (5155): Guest Log: -rw-------. 1 atlas atlas    1003 Sep 24 15:54 memory_monitor_summary.json
2021-09-24 11:55:02 (5155): Guest Log: -rw-------. 1 atlas atlas  159611 Sep 24 15:54 f68d3ab8-f88d-49f0-8aa2-e89551483f88_96666.1.job.log.tgz
2021-09-24 11:55:02 (5155): Guest Log: -rw-------. 1 atlas atlas    9171 Sep 24 15:54 heartbeat.json
2021-09-24 11:55:02 (5155): Guest Log: -rw-------. 1 atlas atlas    1805 Sep 24 15:54 pilotlog.txt
2021-09-24 11:55:02 (5155): Guest Log: -rw-------. 1 atlas atlas   90129 Sep 24 15:54 f68d3ab8-f88d-49f0-8aa2-e89551483f88_96666.1.job.log
2021-09-24 11:55:02 (5155): Guest Log: -rw-------. 1 atlas atlas     536 Sep 24 15:54 output.list
2021-09-24 11:55:02 (5155): Guest Log: -rw-r--r--. 1 atlas atlas     748 Sep 24 15:54 runtime_log
2021-09-24 11:55:02 (5155): Guest Log: -rw-------. 1 atlas atlas 1710080 Sep 24 15:54 result.tar.gz
2021-09-24 11:55:02 (5155): Guest Log: -rw-r--r--. 1 atlas atlas    9274 Sep 24 15:54 runtime_log.err
2021-09-24 11:55:02 (5155): Guest Log: -rw-------. 1 atlas atlas     555 Sep 24 15:54 edINDmnK2nzn7Olcko1bjSoqABFKDmABFKDmZr2WDmvJFKDm3CR5bm.diag
2021-09-24 11:55:02 (5155): Guest Log: Looking for outputfile output.1.f68d3ab8-f88d-49f0-8aa2-e89551483f88_96666.pool.root
2021-09-24 11:55:02 (5155): Guest Log: HITS file was successfully produced
2021-09-24 11:55:02 (5155): Guest Log: -rw-------. 1 atlas atlas 1433867 Sep 24 15:54 /home/atlas/RunAtlas/output.1.f68d3ab8-f88d-49f0-8aa2-e89551483f88_96666.pool.root
2021-09-24 11:55:02 (5155): Guest Log: Successfully finished the ATLAS job!
2021-09-24 11:55:02 (5155): Guest Log: Copying the results back to the shared directory!
2021-09-24 11:55:02 (5155): Guest Log:  *** Contents of shared directory: ***
2021-09-24 11:55:02 (5155): Guest Log: total 40748
2021-09-24 11:55:02 (5155): Guest Log: -rw-r--r--. 1 root root 38184411 Sep 24 15:35 ATLAS.root_0
2021-09-24 11:55:02 (5155): Guest Log: -rw-r--r--. 1 root root  1433867 Sep 24 15:54 HITS.pool.root.1
2021-09-24 11:55:02 (5155): Guest Log: -rw-r--r--. 1 root root     8958 Sep 24 15:35 init_data.xml
2021-09-24 11:55:02 (5155): Guest Log: -rw-r--r--. 1 root root   354550 Sep 24 15:35 input.tar.gz
2021-09-24 11:55:02 (5155): Guest Log: -rw-r--r--. 1 root root  1710080 Sep 24 15:54 result.tar.gz
2021-09-24 11:55:02 (5155): Guest Log: -rw-r--r--. 1 root root    16541 Sep 24 15:35 start_atlas.sh
2021-09-24 11:55:02 (5155): Guest Log:  *** Success! Shutting down the machine. ***
2021-09-24 11:55:02 (5155): VM Completion File Detected.
2021-09-24 11:55:02 (5155): Powering off VM.
2021-09-24 11:55:05 (5155): Successfully stopped VM.
2021-09-24 11:55:05 (5155): Deregistering VM. (boinc_21c246c2f95e681e, slot#13)
2021-09-24 11:55:06 (5155): Removing network bandwidth throttle group from VM.
2021-09-24 11:55:06 (5155): Removing storage controller(s) from VM.
2021-09-24 11:55:07 (5155): Removing VM from VirtualBox.
2021-09-24 11:55:07 (5155): Removing virtual disk drive from VirtualBox.
11:55:12 (5155): called boinc_finish(0)

</stderr_txt>
]]>


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