Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
20:51:50 (2542): wrapper (7.7.26015): starting
20:51:50 (2542): wrapper: running run_atlas (--nthreads 4)
[2023-08-21 20:51:50] Arguments: --nthreads 4
[2023-08-21 20:51:50] Threads: 4
[2023-08-21 20:51:50] Checking for CVMFS
[2023-08-21 20:51:56] Probing /cvmfs/atlas.cern.ch... OK
[2023-08-21 20:52:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-08-21 20:52:01] Running cvmfs_config stat atlas.cern.ch
[2023-08-21 20:52:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-08-21 20:52:01] 2.9.0.0 2765 0 24512 122727 3 1 3554448 4194305 0 130560 0 0 0.000 829 308 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2023-08-21 20:52:01] CVMFS is ok
[2023-08-21 20:52:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-08-21 20:52:01] Checking for apptainer binary...
[2023-08-21 20:52:01] Using apptainer found in PATH at /usr/bin/apptainer
[2023-08-21 20:52:01] Running /usr/bin/apptainer --version
[2023-08-21 20:52:02] apptainer version 1.0.3
[2023-08-21 20:52:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-08-21 20:52:03] TeeC16
[2023-08-21 20:52:03] apptainer works
[2023-08-21 20:52:03] Set ATHENA_PROC_NUMBER=4
[2023-08-21 20:52:03] Set ATHENA_CORE_NUMBER=4
[2023-08-21 20:52:03] Starting ATLAS job with PandaID=5938206889
[2023-08-21 20:52:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-08-21 21:11:16]  *** The last 200 lines of the pilot log: ***
[2023-08-21 21:11:16] 2023-08-21 20:10:19,423 | INFO     | number of running child processes to parent process 12880: 1
[2023-08-21 21:11:16] 2023-08-21 20:10:19,423 | INFO     | maximum number of monitored processes: 5
[2023-08-21 21:11:16] 2023-08-21 20:10:21,927 | INFO     | monitor loop #195: job 0:5938206889 is in state 'stageout'
[2023-08-21 21:11:16] 2023-08-21 20:10:21,964 | INFO     | number of running child processes to parent process 12880: 1
[2023-08-21 21:11:16] 2023-08-21 20:10:21,964 | INFO     | maximum number of monitored processes: 5
[2023-08-21 21:11:16] 2023-08-21 20:10:24,468 | INFO     | monitor loop #196: job 0:5938206889 is in state 'stageout'
[2023-08-21 21:11:16] 2023-08-21 20:10:24,511 | INFO     | number of running child processes to parent process 12880: 1
[2023-08-21 21:11:16] 2023-08-21 20:10:24,512 | INFO     | maximum number of monitored processes: 5
[2023-08-21 21:11:16] 2023-08-21 20:10:27,015 | INFO     | monitor loop #197: job 0:5938206889 is in state 'stageout'
[2023-08-21 21:11:16] 2023-08-21 20:10:27,054 | INFO     | number of running child processes to parent process 12880: 1
[2023-08-21 21:11:16] 2023-08-21 20:10:27,055 | INFO     | maximum number of monitored processes: 5
[2023-08-21 21:11:16] 2023-08-21 20:10:29,558 | INFO     | monitor loop #198: job 0:5938206889 is in state 'stageout'
[2023-08-21 21:11:16] 2023-08-21 20:10:29,599 | INFO     | number of running child processes to parent process 12880: 1
[2023-08-21 21:11:16] 2023-08-21 20:10:29,599 | INFO     | maximum number of monitored processes: 5
[2023-08-21 21:11:16] 2023-08-21 20:10:32,102 | INFO     | monitor loop #199: job 0:5938206889 is in state 'stageout'
[2023-08-21 21:11:16] 2023-08-21 20:10:32,142 | INFO     | number of running child processes to parent process 12880: 1
[2023-08-21 21:11:16] 2023-08-21 20:10:32,142 | INFO     | maximum number of monitored processes: 5
[2023-08-21 21:11:16] 2023-08-21 20:10:34,645 | INFO     | monitor loop #200: job 0:5938206889 is in state 'stageout'
[2023-08-21 21:11:16] 2023-08-21 20:10:34,689 | INFO     | number of running child processes to parent process 12880: 1
[2023-08-21 21:11:16] 2023-08-21 20:10:34,690 | INFO     | maximum number of monitored processes: 5
[2023-08-21 21:11:16] 2023-08-21 20:10:37,193 | INFO     | monitor loop #201: job 0:5938206889 is in state 'stageout'
[2023-08-21 21:11:16] 2023-08-21 20:10:37,228 | INFO     | number of running child processes to parent process 12880: 1
[2023-08-21 21:11:16] 2023-08-21 20:10:37,228 | INFO     | maximum number of monitored processes: 5
[2023-08-21 21:11:16] 2023-08-21 20:10:39,731 | INFO     | monitor loop #202: job 0:5938206889 is in state 'stageout'
[2023-08-21 21:11:16] 2023-08-21 20:10:39,774 | INFO     | number of running child processes to parent process 12880: 1
[2023-08-21 21:11:16] 2023-08-21 20:10:39,774 | INFO     | maximum number of monitored processes: 5
[2023-08-21 21:11:16] 2023-08-21 20:10:40,912 | INFO     | 1059s have passed since pilot start
[2023-08-21 21:11:16] 2023-08-21 20:10:42,277 | INFO     | monitor loop #203: job 0:5938206889 is in state 'stageout'
[2023-08-21 21:11:16] 2023-08-21 20:10:42,317 | INFO     | number of running child processes to parent process 12880: 1
[2023-08-21 21:11:16] 2023-08-21 20:10:42,317 | INFO     | maximum number of monitored processes: 5
[2023-08-21 21:11:16] 2023-08-21 20:10:44,418 | INFO     | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-08-21 21:11:16] 2023-08-21 20:10:44,555 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-08-21 21:11:16] 2023-08-21 20:10:44,555 | WARNING  | cache file=/home/m/BOINC/slots/0/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/home/m/BOINC/slots/0/agis_ddmendpoints.ag
[2023-08-21 21:11:16] 2023-08-21 20:10:44,605 | INFO     | transferring file 65cff55d-9aff-4108-ae07-9abea05c7903_4737.1.job.log.tgz from /home/m/BOINC/slots/0/PanDA_Pilot-5938206889/65cff55d-9aff-4108-ae07-9abea05c7903_47
[2023-08-21 21:11:16] 2023-08-21 20:10:44,606 | INFO     | executing command: /usr/bin/env mv /home/m/BOINC/slots/0/PanDA_Pilot-5938206889/65cff55d-9aff-4108-ae07-9abea05c7903_4737.1.job.log.tgz /home/m/BOINC/slots/0/65cff
[2023-08-21 21:11:16] 2023-08-21 20:10:44,624 | INFO     | Adding to output.list: 65cff55d-9aff-4108-ae07-9abea05c7903_4737.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/b5/c6/65cff55d-9aff-4
[2023-08-21 21:11:16] 2023-08-21 20:10:44,625 | INFO     | summary of transferred files:
[2023-08-21 21:11:16] 2023-08-21 20:10:44,625 | INFO     |  -- lfn=65cff55d-9aff-4108-ae07-9abea05c7903_4737.1.job.log.tgz, status_code=0, status=transferred
[2023-08-21 21:11:16] 2023-08-21 20:10:44,625 | INFO     | stage-out finished correctly
[2023-08-21 21:11:16] 2023-08-21 20:10:44,820 | INFO     | monitor loop #204: job 0:5938206889 is in state 'finished'
[2023-08-21 21:11:16] 2023-08-21 20:10:44,820 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-08-21 21:11:16] 2023-08-21 20:10:45,198 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2023-08-21 21:11:16] 2023-08-21 20:10:45,256 | INFO     | job 5938206889 has state=finished
[2023-08-21 21:11:16] 2023-08-21 20:10:45,256 | INFO     | preparing for final server update for job 5938206889 in state='finished'
[2023-08-21 21:11:16] 2023-08-21 20:10:45,257 | INFO     | this job has now completed (state=finished)
[2023-08-21 21:11:16] 2023-08-21 20:10:45,257 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2023-08-21 21:11:16] 2023-08-21 20:10:45,257 | INFO     | job 5938206889 has finished - writing final server update
[2023-08-21 21:11:16] 2023-08-21 20:10:45,258 | WARNING  | wrong length of table data, x=[1692648096.0], y=[1619298.0] (must be same and length>=4)
[2023-08-21 21:11:16] 2023-08-21 20:10:45,259 | INFO     | total number of processed events: 2 (read)
[2023-08-21 21:11:16] 2023-08-21 20:10:45,280 | INFO     | executing command: lscpu
[2023-08-21 21:11:16] 2023-08-21 20:10:45,300 | INFO     | found 2 cores (2 cores per socket, 1 sockets)
[2023-08-21 21:11:16] 2023-08-21 20:10:45,300 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-08-21 21:11:16] 2023-08-21 20:10:45,326 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2023-08-21 21:11:16] 2023-08-21 20:10:47,323 | INFO     | monitor loop #205: job 0:5938206889 is in state 'finished'
[2023-08-21 21:11:16] 2023-08-21 20:10:47,324 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-08-21 21:11:16] 2023-08-21 20:10:49,827 | INFO     | monitor loop #206: job 0:5938206889 is in state 'finished'
[2023-08-21 21:11:16] 2023-08-21 20:10:49,828 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-08-21 21:11:16] 2023-08-21 20:10:52,331 | INFO     | monitor loop #207: job 0:5938206889 is in state 'finished'
[2023-08-21 21:11:16] 2023-08-21 20:10:52,332 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-08-21 21:11:16] 2023-08-21 20:10:54,842 | INFO     | monitor loop #208: job 0:5938206889 is in state 'finished'
[2023-08-21 21:11:16] 2023-08-21 20:10:54,843 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-08-21 21:11:16] 2023-08-21 20:10:55,205 | INFO     | CPU arch script returned: x86-64-v2
[2023-08-21 21:11:16] 2023-08-21 20:10:55,205 | INFO     | using path: /home/m/BOINC/slots/0/PanDA_Pilot-5938206889/memory_monitor_summary.json (trf name=prmon)
[2023-08-21 21:11:16] 2023-08-21 20:10:55,207 | INFO     | extracted standard info from prmon json
[2023-08-21 21:11:16] 2023-08-21 20:10:55,207 | INFO     | extracted standard memory fields from prmon json
[2023-08-21 21:11:16] 2023-08-21 20:10:55,207 | INFO     | ..............................
[2023-08-21 21:11:16] 2023-08-21 20:10:55,207 | INFO     | . Timing measurements:
[2023-08-21 21:11:16] 2023-08-21 20:10:55,207 | INFO     | . get job = 71 s
[2023-08-21 21:11:16] 2023-08-21 20:10:55,207 | INFO     | . initial setup = 66 s
[2023-08-21 21:11:16] 2023-08-21 20:10:55,207 | INFO     | . payload setup = 8 s
[2023-08-21 21:11:16] 2023-08-21 20:10:55,207 | INFO     | . stage-in = 47 s
[2023-08-21 21:11:16] 2023-08-21 20:10:55,208 | INFO     | . payload execution = 432 s
[2023-08-21 21:11:16] 2023-08-21 20:10:55,208 | INFO     | . stage-out = 422 s
[2023-08-21 21:11:16] 2023-08-21 20:10:55,208 | INFO     | ..............................
[2023-08-21 21:11:16] 2023-08-21 20:10:55,279 | INFO     | 
[2023-08-21 21:11:16] 2023-08-21 20:10:55,279 | INFO     | job summary report
[2023-08-21 21:11:16] 2023-08-21 20:10:55,279 | INFO     | --------------------------------------------------
[2023-08-21 21:11:16] 2023-08-21 20:10:55,279 | INFO     | PanDA job id: 5938206889
[2023-08-21 21:11:16] 2023-08-21 20:10:55,279 | INFO     | task id: NULL
[2023-08-21 21:11:16] 2023-08-21 20:10:55,280 | INFO     | errors: (none)
[2023-08-21 21:11:16] 2023-08-21 20:10:55,280 | INFO     | status: LOG_TRANSFER = DONE 
[2023-08-21 21:11:16] 2023-08-21 20:10:55,280 | INFO     | pilot state: finished 
[2023-08-21 21:11:16] 2023-08-21 20:10:55,280 | INFO     | transexitcode: 0
[2023-08-21 21:11:16] 2023-08-21 20:10:55,280 | INFO     | exeerrorcode: 0
[2023-08-21 21:11:16] 2023-08-21 20:10:55,280 | INFO     | exeerrordiag: 
[2023-08-21 21:11:16] 2023-08-21 20:10:55,280 | INFO     | exitcode: 0
[2023-08-21 21:11:16] 2023-08-21 20:10:55,280 | INFO     | exitmsg: OK
[2023-08-21 21:11:16] 2023-08-21 20:10:55,280 | INFO     | cpuconsumptiontime: 224 s
[2023-08-21 21:11:16] 2023-08-21 20:10:55,280 | INFO     | nevents: 2
[2023-08-21 21:11:16] 2023-08-21 20:10:55,280 | INFO     | neventsw: 0
[2023-08-21 21:11:16] 2023-08-21 20:10:55,280 | INFO     | pid: 12880
[2023-08-21 21:11:16] 2023-08-21 20:10:55,280 | INFO     | pgrp: 12880
[2023-08-21 21:11:16] 2023-08-21 20:10:55,280 | INFO     | corecount: 4
[2023-08-21 21:11:16] 2023-08-21 20:10:55,280 | INFO     | event service: False
[2023-08-21 21:11:16] 2023-08-21 20:10:55,281 | INFO     | sizes: {0: 2491494, 1: 2491693, 11: 2491839, 22: 2491867, 33: 2491895, 43: 2491923, 53: 2492139, 54: 2492167, 444: 2514462, 867: 2523850, 877: 2524016}
[2023-08-21 21:11:16] 2023-08-21 20:10:55,281 | INFO     | --------------------------------------------------
[2023-08-21 21:11:16] 2023-08-21 20:10:55,281 | INFO     | 
[2023-08-21 21:11:16] 2023-08-21 20:10:55,281 | INFO     | executing command: ls -lF /home/m/BOINC/slots/0
[2023-08-21 21:11:16] 2023-08-21 20:10:55,300 | INFO     | queue jobs had 0 job(s) [purged]
[2023-08-21 21:11:16] 2023-08-21 20:10:55,301 | INFO     | queue payloads had 0 job(s) [purged]
[2023-08-21 21:11:16] 2023-08-21 20:10:55,301 | INFO     | queue data_in had 0 job(s) [purged]
[2023-08-21 21:11:16] 2023-08-21 20:10:55,301 | INFO     | queue data_out had 0 job(s) [purged]
[2023-08-21 21:11:16] 2023-08-21 20:10:55,301 | INFO     | queue current_data_in had 0 job(s) [purged]
[2023-08-21 21:11:16] 2023-08-21 20:10:55,301 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2023-08-21 21:11:16] 2023-08-21 20:10:55,301 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2023-08-21 21:11:16] 2023-08-21 20:10:55,301 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2023-08-21 21:11:16] 2023-08-21 20:10:55,301 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2023-08-21 21:11:16] 2023-08-21 20:10:55,301 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2023-08-21 21:11:16] 2023-08-21 20:10:55,301 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2023-08-21 21:11:16] 2023-08-21 20:10:55,302 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2023-08-21 21:11:16] 2023-08-21 20:10:55,302 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2023-08-21 21:11:16] 2023-08-21 20:10:55,302 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2023-08-21 21:11:16] 2023-08-21 20:10:55,302 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2023-08-21 21:11:16] 2023-08-21 20:10:55,302 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2023-08-21 21:11:16] 2023-08-21 20:10:55,302 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2023-08-21 21:11:16] 2023-08-21 20:10:55,302 | INFO     | queue completed_jobids has 1 job(s)
[2023-08-21 21:11:16] 2023-08-21 20:10:55,302 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2023-08-21 21:11:16] 2023-08-21 20:10:55,302 | INFO     | queue messages had 0 job(s) [purged]
[2023-08-21 21:11:16] 2023-08-21 20:10:55,303 | INFO     | job 5938206889 has completed (purged errors)
[2023-08-21 21:11:16] 2023-08-21 20:10:55,303 | INFO     | overall cleanup function is called
[2023-08-21 21:11:16] 2023-08-21 20:10:56,310 | INFO     | --- collectZombieJob: --- 10, [12880]
[2023-08-21 21:11:16] 2023-08-21 20:10:56,310 | INFO     | zombie collector trying to kill pid 12880
[2023-08-21 21:11:16] 2023-08-21 20:10:56,310 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-08-21 21:11:16] 2023-08-21 20:10:57,311 | INFO     | collected zombie processes
[2023-08-21 21:11:16] 2023-08-21 20:10:57,312 | INFO     | will now attempt to kill all subprocesses of pid=12880
[2023-08-21 21:11:16] 2023-08-21 20:10:57,353 | INFO     | process IDs to be killed: [12880] (in reverse order)
[2023-08-21 21:11:16] 2023-08-21 20:10:57,386 | WARNING  | found no corresponding commands to process id(s)
[2023-08-21 21:11:16] 2023-08-21 20:10:57,386 | INFO     | Do not look for orphan processes in BOINC jobs
[2023-08-21 21:11:16] 2023-08-21 20:10:57,386 | INFO     | ready for new job
[2023-08-21 21:11:16] 2023-08-21 20:10:57,386 | INFO     | pilot has finished with previous job - re-establishing logging
[2023-08-21 21:11:16] 2023-08-21 20:10:57,387 | INFO     | *************************************
[2023-08-21 21:11:16] 2023-08-21 20:10:57,387 | INFO     | ***  PanDA Pilot version 3.6.4.7  ***
[2023-08-21 21:11:16] 2023-08-21 20:10:57,387 | INFO     | *************************************
[2023-08-21 21:11:16] 2023-08-21 20:10:57,387 | INFO     | 
[2023-08-21 21:11:16] 2023-08-21 20:10:57,407 | INFO     | architecture information:
[2023-08-21 21:11:16] 2023-08-21 20:10:57,408 | INFO     | executing command: cat /etc/os-release
[2023-08-21 21:11:16] 2023-08-21 20:10:57,424 | INFO     | cat /etc/os-release:
[2023-08-21 21:11:16] NAME="CentOS Linux"
[2023-08-21 21:11:16] VERSION="7 (Core)"
[2023-08-21 21:11:16] ID="centos"
[2023-08-21 21:11:16] ID_LIKE="rhel fedora"
[2023-08-21 21:11:16] VERSION_ID="7"
[2023-08-21 21:11:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2023-08-21 21:11:16] ANSI_COLOR="0;31"
[2023-08-21 21:11:16] CPE_NAME="cpe:/o:centos:centos:7"
[2023-08-21 21:11:16] HOME_URL="https://www.centos.org/"
[2023-08-21 21:11:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2023-08-21 21:11:16] 
[2023-08-21 21:11:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2023-08-21 21:11:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2023-08-21 21:11:16] REDHAT_SUPPORT_PRODUCT="centos"
[2023-08-21 21:11:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2023-08-21 21:11:16] 
[2023-08-21 21:11:16] 2023-08-21 20:10:57,425 | INFO     | *************************************
[2023-08-21 21:11:16] 2023-08-21 20:10:57,927 | INFO     | executing command: df -mP /home/m/BOINC/slots/0
[2023-08-21 21:11:16] 2023-08-21 20:10:57,947 | INFO     | sufficient remaining disk space (423382482944 B)
[2023-08-21 21:11:16] 2023-08-21 20:10:57,947 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2023-08-21 21:11:16] 2023-08-21 20:10:57,947 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2023-08-21 21:11:16] 2023-08-21 20:10:57,948 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2023-08-21 21:11:16] 2023-08-21 20:10:57,951 | INFO     | found 0 job(s) in 20 queues
[2023-08-21 21:11:16] 2023-08-21 20:10:57,951 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2023-08-21 21:11:16] 2023-08-21 20:10:57,951 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2023-08-21 21:11:16] 2023-08-21 20:10:58,352 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2023-08-21 21:11:16] 2023-08-21 20:10:58,352 | INFO     | aborting loop
[2023-08-21 21:11:16] 2023-08-21 20:10:58,953 | INFO     | [job] retrieve thread has finished
[2023-08-21 21:11:16] 2023-08-21 20:10:59,082 | INFO     | [job] create_data_payload thread has finished
[2023-08-21 21:11:16] 2023-08-21 20:10:59,091 | INFO     | [payload] control thread has finished
[2023-08-21 21:11:16] 2023-08-21 20:10:59,150 | INFO     | [payload] validate_post thread has finished
[2023-08-21 21:11:16] 2023-08-21 20:10:59,169 | INFO     | [data] control thread has finished
[2023-08-21 21:11:16] 2023-08-21 20:10:59,218 | INFO     | [payload] validate_pre thread has finished
[2023-08-21 21:11:16] 2023-08-21 20:10:59,258 | INFO     | [job] control thread has finished
[2023-08-21 21:11:16] 2023-08-21 20:10:59,358 | INFO     | [job] job monitor thread has finished
[2023-08-21 21:11:16] 2023-08-21 20:10:59,953 | INFO     | [data] copytool_out thread has finished
[2023-08-21 21:11:16] 2023-08-21 20:11:00,079 | INFO     | [payload] failed_post thread has finished
[2023-08-21 21:11:16] 2023-08-21 20:11:00,274 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-08-21 21:11:16] 2023-08-21 20:11:00,285 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2023-08-21 21:11:16] 2023-08-21 20:11:00,286 | INFO     | [data] copytool_in thread has finished
[2023-08-21 21:11:16] 2023-08-21 20:11:00,287 | INFO     | [payload] execute_payloads thread has finished
[2023-08-21 21:11:16] 2023-08-21 20:11:00,366 | INFO     | [job] validate thread has finished
[2023-08-21 21:11:16] 2023-08-21 20:11:01,290 | INFO     | [job] queue monitor thread has finished
[2023-08-21 21:11:16] 2023-08-21 20:11:04,279 | INFO     | [data] queue_monitor thread has finished
[2023-08-21 21:11:16] 2023-08-21 20:11:08,885 | INFO     | job.realtimelogging is not enabled
[2023-08-21 21:11:16] 2023-08-21 20:11:09,891 | INFO     | [payload] run_realtimelog thread has finished
[2023-08-21 21:11:16] 2023-08-21 20:11:11,383 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140241566394176)>', '<ExcThread(monitor, started 140241000191744)>']
[2023-08-21 21:11:16] 2023-08-21 20:11:12,019 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2023-08-21 21:11:16] 2023-08-21 20:11:12,019 | INFO     | [monitor] control thread has ended
[2023-08-21 21:11:16] 2023-08-21 20:11:16,408 | INFO     | end of generic workflow (traces error code: 0)
[2023-08-21 21:11:16] 2023-08-21 20:11:16,409 | INFO     | traces error code: 0
[2023-08-21 21:11:16] 2023-08-21 20:11:16,409 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2023-08-21 21:11:16] 2023-08-21 20:11:16,458 [wrapper] ==== pilot stdout END ====
[2023-08-21 21:11:16] 2023-08-21 20:11:16,462 [wrapper] ==== wrapper stdout RESUME ====
[2023-08-21 21:11:16] 2023-08-21 20:11:16,467 [wrapper] pilotpid: 6333
[2023-08-21 21:11:16] 2023-08-21 20:11:16,471 [wrapper] Pilot exit status: 0
[2023-08-21 21:11:16] 2023-08-21 20:11:16,482 [wrapper] pandaids: 5938206889
[2023-08-21 21:11:16] 2023-08-21 20:11:16,488 [wrapper] apfmon messages muted
[2023-08-21 21:11:16] 2023-08-21 20:11:16,491 [wrapper] Test setup, not cleaning
[2023-08-21 21:11:16] 2023-08-21 20:11:16,494 [wrapper] ==== wrapper stdout END ====
[2023-08-21 21:11:16] 2023-08-21 20:11:16,498 [wrapper] ==== wrapper stderr END ====
[2023-08-21 21:11:16] 2023-08-21 20:11:16,507 [wrapper] wrapperexiting ec=0, duration=1153
[2023-08-21 21:11:16] 2023-08-21 20:11:16,512 [wrapper] apfmon messages muted
[2023-08-21 21:11:16]  *** Error codes and diagnostics ***
[2023-08-21 21:11:16]     "exeErrorCode": 0,
[2023-08-21 21:11:16]     "exeErrorDiag": "",
[2023-08-21 21:11:16]     "pilotErrorCode": 0,
[2023-08-21 21:11:16]     "pilotErrorDiag": "",
[2023-08-21 21:11:16]  *** Listing of results directory ***
[2023-08-21 21:11:16] total 45356
[2023-08-21 21:11:16] -rw-r--r-- 1 m m   418016 Aug 21 20:36 pilot3.tar.gz
[2023-08-21 21:11:16] -rw-r--r-- 1 m m     4388 Aug 21 20:41 queuedata.json
[2023-08-21 21:11:16] -rwx------ 1 m m    27277 Aug 21 20:43 runpilot2-wrapper.sh
[2023-08-21 21:11:16] -rw-rw-r-- 1 m m      107 Aug 21 20:51 wrapper_26015_x86_64-pc-linux-gnu
[2023-08-21 21:11:16] -rwxr-xr-x 1 m m     7986 Aug 21 20:51 run_atlas
[2023-08-21 21:11:16] -rw-rw-r-- 1 m m      112 Aug 21 20:51 job.xml
[2023-08-21 21:11:16] -rw-r--r-- 2 m m    17600 Aug 21 20:51 start_atlas.sh
[2023-08-21 21:11:16] drwxrwx--x 2 m m     4096 Aug 21 20:51 shared
[2023-08-21 21:11:16] -rw-r--r-- 2 m m   428812 Aug 21 20:51 input.tar.gz
[2023-08-21 21:11:16] -rw-rw-r-- 1 m m     5747 Aug 21 20:51 init_data.xml
[2023-08-21 21:11:16] -rw-r--r-- 2 m m 38705932 Aug 21 20:51 EVNT.04972714._000036.pool.root.1
[2023-08-21 21:11:16] -rw-rw-r-- 1 m m        0 Aug 21 20:51 boinc_lockfile
[2023-08-21 21:11:16] -rw-rw-r-- 1 m m     2681 Aug 21 20:52 pandaJob.out
[2023-08-21 21:11:16] -rw------- 1 m m      424 Aug 21 20:52 setup.sh.local
[2023-08-21 21:11:16] -rw------- 1 m m  1390858 Aug 21 20:54 cric_ddmendpoints.json
[2023-08-21 21:11:16] -rw------- 1 m m  1018573 Aug 21 20:54 agis_schedconf.cvmfs.json
[2023-08-21 21:11:16] drwx------ 4 m m     4096 Aug 21 20:55 pilot3
[2023-08-21 21:11:16] -rw------- 1 m m  1790693 Aug 21 21:03 output.1.65cff55d-9aff-4108-ae07-9abea05c7903_4737.pool.root
[2023-08-21 21:11:16] -rw------- 1 m m     1020 Aug 21 21:03 memory_monitor_summary.json
[2023-08-21 21:11:16] -rw-rw-r-- 1 m m      532 Aug 21 21:03 boinc_task_state.xml
[2023-08-21 21:11:16] -rw------- 1 m m   176100 Aug 21 21:07 65cff55d-9aff-4108-ae07-9abea05c7903_4737.1.job.log.tgz
[2023-08-21 21:11:16] -rw-rw-r-- 1 m m     8192 Aug 21 21:10 boinc_mmap_file
[2023-08-21 21:11:16] -rw-rw-r-- 1 m m       25 Aug 21 21:10 wrapper_checkpoint.txt
[2023-08-21 21:11:16] -rw------- 1 m m     7527 Aug 21 21:10 heartbeat.json
[2023-08-21 21:11:16] -rw------- 1 m m     3969 Aug 21 21:11 pilotlog.txt
[2023-08-21 21:11:16] -rw------- 1 m m   167767 Aug 21 21:11 65cff55d-9aff-4108-ae07-9abea05c7903_4737.1.job.log
[2023-08-21 21:11:16] -rw------- 1 m m      460 Aug 21 21:11 output.list
[2023-08-21 21:11:16] -rw-rw-r-- 1 m m      744 Aug 21 21:11 runtime_log
[2023-08-21 21:11:16] -rw------- 1 m m  2150400 Aug 21 21:11 result.tar.gz
[2023-08-21 21:11:16] -rw-rw-r-- 1 m m    11871 Aug 21 21:11 runtime_log.err
[2023-08-21 21:11:16] -rw------- 1 m m      626 Aug 21 21:11 pX7MDmnzPs3n7Olcko1bjSoqABFKDmABFKDm7AsVDmqjPKDm7ivjlm.diag
[2023-08-21 21:11:16] -rw-rw-r-- 1 m m    22490 Aug 21 21:11 stderr.txt
[2023-08-21 21:11:16] HITS file was successfully produced:
[2023-08-21 21:11:16] -rw------- 1 m m 1790693 Aug 21 21:03 shared/HITS.pool.root.1
[2023-08-21 21:11:16]  *** Contents of shared directory: ***
[2023-08-21 21:11:16] total 42092
[2023-08-21 21:11:16] -rw-r--r-- 2 m m    17600 Aug 21 20:51 start_atlas.sh
[2023-08-21 21:11:16] -rw-r--r-- 2 m m   428812 Aug 21 20:51 input.tar.gz
[2023-08-21 21:11:16] -rw-r--r-- 2 m m 38705932 Aug 21 20:51 ATLAS.root_0
[2023-08-21 21:11:16] -rw------- 1 m m  1790693 Aug 21 21:03 HITS.pool.root.1
[2023-08-21 21:11:16] -rw------- 1 m m  2150400 Aug 21 21:11 result.tar.gz
21:11:18 (2542): run_atlas exited; CPU time 222.253513
21:11:18 (2542): called boinc_finish(0)

</stderr_txt>
]]>

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