Name | 028LDmMulYunShfckohDCDFpABFKDmABFKDm0IbKDmABFKDmKbIIKn_0 |
Workunit | 1888527 |
Created | 11 Apr 2019, 10:14:52 UTC |
Sent | 11 Apr 2019, 13:20:21 UTC |
Report deadline | 18 Apr 2019, 13:20:21 UTC |
Received | 11 Apr 2019, 14:36:20 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 1113 |
Run time | 1 hours 12 min 16 sec |
CPU time | 10 min 3 sec |
Validate state | Valid |
Credit | 459.65 |
Device peak FLOPS | 13.30 GFLOPS |
Application version | ATLAS Simulation v0.60 (vbox64_mt_mcore_atlas) windows_x86_64 |
Peak working set size | 119.46 MB |
Peak swap size | 156.23 MB |
Peak disk usage | 1.98 GB |
<core_client_version>7.14.2</core_client_version> <![CDATA[ <stderr_txt> 2019-04-11 15:23:48 (81144): vboxwrapper (7.9.26200): starting 2019-04-11 15:23:48 (81144): Feature: Checkpoint interval offset (52 seconds) 2019-04-11 15:23:48 (81144): Detected: VirtualBox COM Interface (Version: 5.2.18) 2019-04-11 15:23:48 (81144): Detected: Minimum checkpoint interval (900.000000 seconds) 2019-04-11 15:23:48 (81144): Successfully copied 'init_data.xml' to the shared directory. 2019-04-11 15:23:49 (81144): Create VM. (boinc_b50366144ee724c1, slot#6) 2019-04-11 15:23:49 (81144): Setting Memory Size for VM. (6600MB) 2019-04-11 15:23:49 (81144): Setting CPU Count for VM. (4) 2019-04-11 15:23:49 (81144): Setting Chipset Options for VM. 2019-04-11 15:23:49 (81144): Setting Boot Options for VM. 2019-04-11 15:23:49 (81144): Enabling VM Network Access. 2019-04-11 15:23:49 (81144): Setting Network Configuration for NAT. 2019-04-11 15:23:49 (81144): Disabling USB Support for VM. 2019-04-11 15:23:49 (81144): Disabling COM Port Support for VM. 2019-04-11 15:23:49 (81144): Disabling LPT Port Support for VM. 2019-04-11 15:23:49 (81144): Disabling Audio Support for VM. 2019-04-11 15:23:49 (81144): Disabling Clipboard Support for VM. 2019-04-11 15:23:49 (81144): Disabling Drag and Drop Support for VM. 2019-04-11 15:23:49 (81144): Adding storage controller(s) to VM. 2019-04-11 15:23:49 (81144): Adding virtual disk drive to VM. (vm_image.vdi) 2019-04-11 15:23:59 (81144): Adding VirtualBox Guest Additions to VM. 2019-04-11 15:24:00 (81144): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB) 2019-04-11 15:24:00 (81144): forwarding host port 18634 to guest port 80 2019-04-11 15:24:00 (81144): Enabling remote desktop for VM. 2019-04-11 15:24:00 (81144): Enabling shared directory for VM. 2019-04-11 15:24:02 (81144): Starting VM. (boinc_b50366144ee724c1, slot#6) 2019-04-11 15:24:16 (81144): Guest Log: BIOS: VirtualBox 5.2.18 2019-04-11 15:24:16 (81144): Guest Log: CPUID EDX: 0x178bfbff 2019-04-11 15:24:16 (81144): Guest Log: BIOS: ata0-0: PCHS=16383/16/63 LCHS=1024/255/63 2019-04-11 15:24:16 (81144): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032 2019-04-11 15:24:16 (81144): Guest Log: BIOS: Booting from Hard Disk... 2019-04-11 15:24:16 (81144): Successfully started VM. (PID = '78644') 2019-04-11 15:24:16 (81144): Reporting VM Process ID to BOINC. 2019-04-11 15:24:21 (81144): Guest Log: BIOS: KBD: unsupported int 16h function 03 2019-04-11 15:24:21 (81144): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 2019-04-11 15:24:21 (81144): VM state change detected. (old = 'poweroff', new = 'running') 2019-04-11 15:24:26 (81144): Detected: Web Application Enabled (http://localhost:18634) 2019-04-11 15:24:26 (81144): Detected: Remote Desktop Enabled (localhost:18635) 2019-04-11 15:24:31 (81144): Preference change detected 2019-04-11 15:24:31 (81144): Setting CPU throttle for VM. (100%) 2019-04-11 15:24:31 (81144): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds)) 2019-04-11 15:24:42 (81144): Guest Log: vboxguest: major 0, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000) 2019-04-11 15:24:57 (81144): Guest Log: VBoxGuest: VBoxGuestCommonGuestCapsAcquire: pSession(0xffff8801aecc7010), OR(0x0), NOT(0xffffffff), flags(0x0) 2019-04-11 15:24:57 (81144): Guest Log: VBoxGuest: VBoxGuestCommonGuestCapsAcquire: pSession(0xffff8801aecc6a10), OR(0x0), NOT(0xffffffff), flags(0x0) 2019-04-11 15:24:57 (81144): Guest Log: VBoxGuest: VBoxGuestCommonGuestCapsAcquire: pSession(0xffff8801aecc7e10), OR(0x0), NOT(0xffffffff), flags(0x0) 2019-04-11 15:24:57 (81144): Guest Log: VBoxGuest: VBoxGuestCommonGuestCapsAcquire: pSession(0xffff8801aecc6810), OR(0x0), NOT(0xffffffff), flags(0x0) 2019-04-11 15:26:12 (81144): Guest Log: Copying input files into RunAtlas. 2019-04-11 15:26:22 (81144): Guest Log: Copied input files into RunAtlas. 2019-04-11 15:26:32 (81144): Guest Log: copied the webapp to /var/www 2019-04-11 15:26:32 (81144): Guest Log: set up http_proxy http://192.168.200.1:0 2019-04-11 15:26:32 (81144): Guest Log: ATHENA_PROC_NUMBER=4 2019-04-11 15:26:32 (81144): Guest Log: Starting ATLAS job. ( ) 2019-04-11 16:35:51 (81144): Guest Log: log_extracts: 2019-04-11 16:35:51 (81144): Guest Log: - Last 10 lines from /home/atlas01/RunAtlas/Panda_Pilot_7853_1554989277/PandaJob/athena_stdout.txt - 2019-04-11 16:35:51 (81144): Guest Log: PyJobTransforms.trfExe.preExecute 2019-04-11 15:30:37,878 INFO Batch/grid running - command outputs will not be echoed. Logs for EVNTtoHITS are in log.EVNTtoHITS 2019-04-11 16:35:51 (81144): Guest Log: PyJobTransforms.trfExe.preExecute 2019-04-11 15:30:37,879 INFO Now writing wrapper for substep executor EVNTtoHITS 2019-04-11 16:35:51 (81144): Guest Log: PyJobTransforms.trfExe._writeAthenaWrapper 2019-04-11 15:30:37,879 INFO Valgrind not engaged 2019-04-11 16:35:51 (81144): Guest Log: PyJobTransforms.trfExe.preExecute 2019-04-11 15:30:37,879 INFO Athena will be executed in a subshell via ['./runwrapper.EVNTtoHITS.sh'] 2019-04-11 16:35:51 (81144): Guest Log: PyJobTransforms.trfExe.execute 2019-04-11 15:30:37,879 INFO Starting execution of EVNTtoHITS (['./runwrapper.EVNTtoHITS.sh']) 2019-04-11 16:35:51 (81144): Guest Log: PyJobTransforms.trfExe.execute 2019-04-11 16:33:39,049 INFO EVNTtoHITS executor returns 33 2019-04-11 16:35:51 (81144): Guest Log: PyJobTransforms.trfExe.validate 2019-04-11 16:33:40,013 ERROR Validation of return code failed: Non-zero return code from EVNTtoHITS (33) (Error code 65) 2019-04-11 16:35:51 (81144): Guest Log: PyJobTransforms.trfExe.validate 2019-04-11 16:33:40,037 INFO Scanning logfile log.EVNTtoHITS for errors 2019-04-11 16:35:51 (81144): Guest Log: PyJobTransforms.transform.execute 2019-04-11 16:33:40,081 CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP" 2019-04-11 16:35:51 (81144): Guest Log: PyJobTransforms.transform.execute 2019-04-11 16:33:43,346 WARNING Transform now exiting early with exit code 65 (Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP") 2019-04-11 16:35:51 (81144): Guest Log: - Walltime - 2019-04-11 16:35:51 (81144): Guest Log: JobRetrival=1, StageIn=16, Execution=3878, StageOut=0, CleanUp=17 2019-04-11 16:35:51 (81144): Guest Log: The last 10 lines of the pilot log. 2019-04-11 16:35:51 (81144): Guest Log: <metadata att_name="surl" att_value="srm://srm.ndgf.org:8443/srm/managerv2?SFN=/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/83/79/log.17602216._050948.job.log.tgz.1"/> 2019-04-11 16:35:51 (81144): Guest Log: <metadata att_name="fsize" att_value="78966"/> 2019-04-11 16:35:51 (81144): Guest Log: <metadata att_name="adler32" att_value="ac06f72d"/> 2019-04-11 16:35:51 (81144): Guest Log: </File> 2019-04-11 16:35:51 (81144): Guest Log: </POOLFILECATALOG> 2019-04-11 16:35:51 (81144): Guest Log: 2019-04-11 14:35:47 UTC [wrapper] --------- 2019-04-11 16:35:51 (81144): Guest Log: 2019-04-11 14:35:47 UTC [wrapper] output list 2019-04-11 16:35:51 (81144): Guest Log: log.17602216._050948.job.log.tgz.1 srm://srm.ndgf.org:8443;autodir=no;spacetoken=ATLASDATADISK/srm/managerv2?SFN=/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/83/79/log.17602216._050948.job.log.tgz.1:checksumtype=adler32:checksumvalue=ac06f72d 2019-04-11 16:35:51 (81144): Guest Log: 2019-04-11 14:35:47 UTC [wrapper] ==== wrapper stdout END ==== 2019-04-11 16:35:51 (81144): Guest Log: 2019-04-11 14:35:47 UTC [wrapper] ==== wrapper stderr END ==== 2019-04-11 16:35:51 (81144): Guest Log: Listing of results directory 2019-04-11 16:35:51 (81144): Guest Log: total 376812 2019-04-11 16:35:51 (81144): Guest Log: -rw-r--r-- 1 atlas01 atlas01 1064884 Apr 10 14:08 pilotcode.tar.gz 2019-04-11 16:35:51 (81144): Guest Log: -rwx------ 1 atlas01 atlas01 15214 Apr 11 12:14 runpilot3-wrapper.sh 2019-04-11 16:35:51 (81144): Guest Log: -rw------- 1 atlas01 atlas01 2886 Apr 11 12:14 pandaJobData.out 2019-04-11 16:35:51 (81144): Guest Log: -rwxr-xr-x 1 atlas01 atlas01 370236929 Apr 11 15:26 EVNT.16926542._000875.pool.root.1 2019-04-11 16:35:51 (81144): Guest Log: -rwxr-xr-x 1 atlas01 atlas01 10355 Apr 11 15:26 init_data.xml 2019-04-11 16:35:51 (81144): Guest Log: -rwxr-xr-x 1 atlas01 atlas01 1073496 Apr 11 15:26 input.tar.gz 2019-04-11 16:35:51 (81144): Guest Log: -rwxr-xr-x 1 atlas01 atlas01 786 Apr 11 15:26 RTE.tar.gz 2019-04-11 16:35:51 (81144): Guest Log: -rwxr-xr-x 1 atlas01 atlas01 8644 Apr 11 15:26 start_atlas.sh 2019-04-11 16:35:51 (81144): Guest Log: drwxr-xr-x 3 atlas01 atlas01 4096 Apr 11 15:26 APPS 2019-04-11 16:35:51 (81144): Guest Log: -rw------- 1 atlas01 atlas01 243 Apr 11 15:26 setup.sh.local 2019-04-11 16:35:51 (81144): Guest Log: lrwxrwxrwx 1 atlas01 atlas01 16 Apr 11 15:27 RunJob.py -> pilot3/RunJob.py 2019-04-11 16:35:51 (81144): Guest Log: lrwxrwxrwx 1 atlas01 atlas01 21 Apr 11 15:27 RunJobEvent.py -> pilot3/RunJobEvent.py 2019-04-11 16:35:51 (81144): Guest Log: lrwxrwxrwx 1 atlas01 atlas01 16 Apr 11 15:27 VmPeak.py -> pilot3/VmPeak.py 2019-04-11 16:35:51 (81144): Guest Log: lrwxrwxrwx 1 atlas01 atlas01 19 Apr 11 15:27 PILOTVERSION -> pilot3/PILOTVERSION 2019-04-11 16:35:51 (81144): Guest Log: lrwxrwxrwx 1 atlas01 atlas01 15 Apr 11 15:27 pilot.py -> pilot3/pilot.py 2019-04-11 16:35:51 (81144): Guest Log: -rw------- 1 atlas01 atlas01 22 Apr 11 15:27 PILOT_INITDIR 2019-04-11 16:35:51 (81144): Guest Log: -rw------- 1 atlas01 atlas01 50 Apr 11 15:27 CURRENT_SITEWORKDIR 2019-04-11 16:35:51 (81144): Guest Log: -rw------- 1 atlas01 atlas01 11465 Apr 11 15:27 pilotlog.txt 2019-04-11 16:35:51 (81144): Guest Log: -rw------- 1 atlas01 atlas01 1 Apr 11 15:28 STATUSCODE 2019-04-11 16:35:51 (81144): Guest Log: -rw------- 1 atlas01 atlas01 11 Apr 11 15:28 pandaIDs.out 2019-04-11 16:35:51 (81144): Guest Log: -rw------- 1 atlas01 atlas01 19 Apr 11 15:28 START_TIME_4305667890 2019-04-11 16:35:51 (81144): Guest Log: -rw-r--r-- 1 atlas01 atlas01 3809 Apr 11 15:28 queuedata.json 2019-04-11 16:35:51 (81144): Guest Log: -rw------- 1 atlas01 atlas01 2886 Apr 11 15:28 pandaJobData_1.out 2019-04-11 16:35:51 (81144): Guest Log: -rw------- 1 atlas01 atlas01 7210745 Apr 11 15:29 agis_ddmendpoints.cvmfs.json 2019-04-11 16:35:51 (81144): Guest Log: -rw------- 1 atlas01 atlas01 4828363 Apr 11 15:29 agis_schedconf.cvmfs.json 2019-04-11 16:35:51 (81144): Guest Log: -rw------- 1 atlas01 atlas01 297 Apr 11 16:33 memory_monitor_summary.json 2019-04-11 16:35:51 (81144): Guest Log: drwx------ 6 atlas01 atlas01 12288 Apr 11 16:34 pilot3 2019-04-11 16:35:51 (81144): Guest Log: -rw------- 1 atlas01 atlas01 203 Apr 11 16:34 pilot_error_report.json 2019-04-11 16:35:51 (81144): Guest Log: -rw------- 1 atlas01 atlas01 166 Apr 11 16:34 workdir_size-4305667890.json 2019-04-11 16:35:51 (81144): Guest Log: -rw------- 1 atlas01 atlas01 78966 Apr 11 16:34 log.17602216._050948.job.log.tgz.1 2019-04-11 16:35:51 (81144): Guest Log: -rw------- 1 atlas01 atlas01 1757 Apr 11 16:34 log_extracts.txt 2019-04-11 16:35:51 (81144): Guest Log: -rw------- 1 atlas01 atlas01 10478 Apr 11 16:34 panda_node_struct.pickle 2019-04-11 16:35:51 (81144): Guest Log: -rw------- 1 atlas01 atlas01 137 Apr 11 16:35 pilotlog-last.txt 2019-04-11 16:35:51 (81144): Guest Log: -rw------- 1 atlas01 atlas01 598 Apr 11 16:35 metadata-surl.xml 2019-04-11 16:35:51 (81144): Guest Log: -rw------- 1 atlas01 atlas01 3872 Apr 11 16:35 jobSmallFiles.tgz 2019-04-11 16:35:51 (81144): Guest Log: -rw------- 1 atlas01 atlas01 357750 Apr 11 16:35 log.17602216._050948.job.log.1 2019-04-11 16:35:51 (81144): Guest Log: -rw------- 1 atlas01 atlas01 489 Apr 11 16:35 028LDmMulYunShfckohDCDFpABFKDmABFKDm0IbKDmABFKDmKbIIKn.diag 2019-04-11 16:35:51 (81144): Guest Log: -rw------- 1 atlas01 atlas01 241 Apr 11 16:35 output.list 2019-04-11 16:35:51 (81144): Guest Log: -rw-r--r-- 1 atlas01 atlas01 7869 Apr 11 16:35 runtime_log.err 2019-04-11 16:35:51 (81144): Guest Log: -rw-r--r-- 1 atlas01 atlas01 712 Apr 11 16:35 runtime_log 2019-04-11 16:35:51 (81144): Guest Log: -rw------- 1 atlas01 atlas01 808960 Apr 11 16:35 result.tar.gz 2019-04-11 16:35:51 (81144): Guest Log: No HITS file was produced 2019-04-11 16:35:51 (81144): Guest Log: Successfully finished the ATLAS job! 2019-04-11 16:35:51 (81144): Guest Log: Copying the results back to the shared directory! 2019-04-11 16:35:51 (81144): Guest Log: Copied the result file back to the shared directory and created atlas_done file! 2019-04-11 16:35:51 (81144): Guest Log: Success! Shutting down the machine. 2019-04-11 16:35:51 (81144): VM Completion File Detected. 2019-04-11 16:35:51 (81144): Powering off VM. 2019-04-11 16:35:52 (81144): Successfully stopped VM. 2019-04-11 16:35:57 (81144): Deregistering VM. (boinc_b50366144ee724c1, slot#6) 2019-04-11 16:35:57 (81144): Removing virtual disk drive(s) from VM. 2019-04-11 16:35:57 (81144): Removing network bandwidth throttle group from VM. 2019-04-11 16:35:57 (81144): Removing storage controller(s) from VM. 2019-04-11 16:35:58 (81144): Removing VM from VirtualBox. 16:36:03 (81144): called boinc_finish(0) </stderr_txt> ]]>
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