Name | JqjLDmzxk1unShfckohDCDFpABFKDmABFKDmqDCMDmABFKDm2ZBsum_1 |
Workunit | 1907434 |
Created | 30 Jun 2019, 16:38:00 UTC |
Sent | 30 Jun 2019, 19:45:15 UTC |
Report deadline | 7 Jul 2019, 19:45:15 UTC |
Received | 1 Jul 2019, 6:47:22 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 2244 |
Run time | 10 hours 54 min 53 sec |
CPU time | 10 hours 8 min 50 sec |
Validate state | Valid |
Credit | 190.46 |
Device peak FLOPS | 2.09 GFLOPS |
Application version | ATLAS Simulation v0.62 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.92 GB |
Peak swap size | 2.56 GB |
Peak disk usage | 845.45 MB |
<core_client_version>7.5.1</core_client_version> <![CDATA[ <stderr_txt> 21:46:34 (8741): wrapper (7.7.26015): starting 21:46:34 (8741): wrapper: running run_atlas (--nthreads 1) singularity image is /cvmfs/atlas.cern.ch/repo/containers/images/singularity/x86_64-slc6.img sys.argv = ['run_atlas', '--nthreads', '1'] THREADS=1 Checking for CVMFS CVMFS is installed OS:Scientific Linux release 6.10 (Carbon) This is SLC or CentOS release 6, run the atlas job without Singularity copy /root/Downloads/BOINC/slots/1/shared/input.tar.gz copy /root/Downloads/BOINC/slots/1/shared/start_atlas.sh copy /root/Downloads/BOINC/slots/1/shared/ATLAS.root_0 copy /root/Downloads/BOINC/slots/1/shared/RTE.tar.gz start atlas job with cmd = sh start_atlas.sh > runtime_log 2> runtime_log.err running cmd return value is 0 Moving ./HITS.18410984._019837.pool.root.1 to shared/HITS.pool.root.1 *****************The last 100 lines of the pilot log****************** 2019-07-01 06:45:46,985 | DEBUG | queue_monitor | pilot.util.auxiliary | get_job_metrics | job metrics="coreCount=1 nEvents=200 leak=15.10" 2019-07-01 06:45:46,985 | INFO | queue_monitor | pilot.control.job | get_data_structure | total number of processed events: 200 (read) 2019-07-01 06:45:47,044 | INFO | queue_monitor | pilot.user.atlas.utilities | get_memory_values | using path: /root/Downloads/BOINC/slots/1/PanDA_Pilot-4400094271/memory_monitor_summary.json 2019-07-01 06:45:47,045 | DEBUG | queue_monitor | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'Max': {'maxRSS': 2109000, 'maxSwap': 0, 'totRCHAR': 1600696102, 'totRBYTES': 1646739456, 'totWCHAR': 117630610, 'totWBYTES': 129273856, 'maxVMEM': 3438128, 'maxPSS': 2101556}, 'Avg': {'avgRSS': 1984348, 'rateWCHAR': 2987, 'avgVMEM': 3318500, 'avgPSS': 1976685, 'rateRCHAR': 40657, 'avgSwap': 0, 'rateRBYTES': 41827, 'rateWBYTES': 3283}} 2019-07-01 06:45:47,045 | INFO | queue_monitor | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard info from memory monitor json 2019-07-01 06:45:47,045 | INFO | queue_monitor | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard memory fields from memory monitor json 2019-07-01 06:45:47,045 | INFO | queue_monitor | pilot.util.auxiliary | timing_report | .............................. 2019-07-01 06:45:47,045 | INFO | queue_monitor | pilot.util.auxiliary | timing_report | . Timing measurements: 2019-07-01 06:45:47,046 | INFO | queue_monitor | pilot.util.auxiliary | timing_report | . get job = 7 s 2019-07-01 06:45:47,046 | INFO | queue_monitor | pilot.util.auxiliary | timing_report | . initial setup = 16 s 2019-07-01 06:45:47,046 | INFO | queue_monitor | pilot.util.auxiliary | timing_report | . payload setup = 0 s 2019-07-01 06:45:47,046 | INFO | queue_monitor | pilot.util.auxiliary | timing_report | . total setup = 16 s 2019-07-01 06:45:47,046 | INFO | queue_monitor | pilot.util.auxiliary | timing_report | . stage-in = 7 s 2019-07-01 06:45:47,046 | INFO | queue_monitor | pilot.util.auxiliary | timing_report | . payload execution = 39438 s 2019-07-01 06:45:47,046 | INFO | queue_monitor | pilot.util.auxiliary | timing_report | . stage-out = 25 s 2019-07-01 06:45:47,046 | INFO | queue_monitor | pilot.util.auxiliary | timing_report | .............................. 2019-07-01 06:45:47,046 | INFO | queue_monitor | pilot.util.auxiliary | get_log_extracts | building log extracts (sent to the server as 'pilotLog') 2019-07-01 06:45:47,047 | DEBUG | queue_monitor | pilot.util.auxiliary | get_panda_tracer_log | PanDA tracer log does not exist: /root/Downloads/BOINC/slots/1/PanDA_Pilot-4400094271/pandatracerlog.txt (ignoring) 2019-07-01 06:45:47,047 | INFO | queue_monitor | pilot.util.container | execute | executing command: tail -n 20 /root/Downloads/BOINC/slots/1/PanDA_Pilot-4400094271/pilotlog.txt 2019-07-01 06:45:47,176 | DEBUG | queue_monitor | pilot.util.auxiliary | get_pilot_log_extracts | dumping warning messages from pilotlog.txt: 2019-07-01 06:45:47,177 | WARNING | queue_monitor | pilot.util.auxiliary | get_log_extracts | detected the following tail of warning/fatal messages in the pilot log: - Log from pilotlog.txt -2019-07-01 06:45:46,985 | INFO | queue_monitor | pilot.api.analytics | get_fitted_data | current memory leak: 15.10 B/s (using 640 data points, chi2=32669898507.629456) 2019-07-01 06:45:46,985 | DEBUG | queue_monitor | pilot.util.auxiliary | get_job_metrics | job metrics="coreCount=1 nEvents=200 leak=15.10" 2019-07-01 06:45:46,985 | INFO | queue_monitor | pilot.control.job | get_data_structure | total number of processed events: 200 (read) 2019-07-01 06:45:47,044 | INFO | queue_monitor | pilot.user.atlas.utilities | get_memory_values | using path: /root/Downloads/BOINC/slots/1/PanDA_Pilot-4400094271/memory_monitor_summary.json 2019-07-01 06:45:47,045 | DEBUG | queue_monitor | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'Max': {'maxRSS': 2109000, 'maxSwap': 0, 'totRCHAR': 1600696102, 'totRBYTES': 1646739456, 'totWCHAR': 117630610, 'totWBYTES': 129273856, 'maxVMEM': 3438128, 'maxPSS': 2101556}, 'Avg': {'avgRSS': 1984348, 'rateWCHAR': 2987, 'avgVMEM': 3318500, 'avgPSS': 1976685, 'rateRCHAR': 40657, 'avgSwap': 0, 'rateRBYTES': 41827, 'rateWBYTES': 3283}} 2019-07-01 06:45:47,045 | INFO | queue_monitor | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard info from memory monitor json 2019-07-01 06:45:47,045 | INFO | queue_monitor | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard memory fields from memory monitor json 2019-07-01 06:45:47,045 | INFO | queue_monitor | pilot.util.auxiliary | timing_report | .............................. 2019-07-01 06:45:47,045 | INFO | queue_monitor | pilot.util.auxiliary | timing_report | . Timing measurements: 2019-07-01 06:45:47,046 | INFO | queue_monitor | pilot.util.auxiliary | timing_report | . get job = 7 s 2019-07-01 06:45:47,046 | INFO | queue_monitor | pilot.util.auxiliary | timing_report | . initial setup = 16 s 2019-07-01 06:45:47,046 | INFO | queue_monitor | pilot.util.auxiliary | timing_report | . payload setup = 0 s 2019-07-01 06:45:47,046 | INFO | queue_monitor | pilot.util.auxiliary | timing_report | . total setup = 16 s 2019-07-01 06:45:47,046 | INFO | queue_monitor | pilot.util.auxiliary | timing_report | . stage-in = 7 s 2019-07-01 06:45:47,046 | INFO | queue_monitor | pilot.util.auxiliary | timing_report | . payload execution = 39438 s 2019-07-01 06:45:47,046 | INFO | queue_monitor | pilot.util.auxiliary | timing_report | . stage-out = 25 s 2019-07-01 06:45:47,046 | INFO | queue_monitor | pilot.util.auxiliary | timing_report | .............................. 2019-07-01 06:45:47,046 | INFO | queue_monitor | pilot.util.auxiliary | get_log_extracts | building log extracts (sent to the server as 'pilotLog') 2019-07-01 06:45:47,047 | DEBUG | queue_monitor | pilot.util.auxiliary | get_panda_tracer_log | PanDA tracer log does not exist: /root/Downloads/BOINC/slots/1/PanDA_Pilot-4400094271/pandatracerlog.txt (ignoring) 2019-07-01 06:45:47,047 | INFO | queue_monitor | pilot.util.container | execute | executing command: tail -n 20 /root/Downloads/BOINC/slots/1/PanDA_Pilot-4400094271/pilotlog.txt - Error messages from pilotlog.txt - "CRITICAL": 0, "ERROR": 0, "FATAL": 0, 2019-07-01 06:45:47,178 | DEBUG | queue_monitor | pilot.control.job | send_state | wrote heartbeat to file /root/Downloads/BOINC/slots/1/heartbeat.json 2019-07-01 06:45:47,179 | INFO | queue_monitor | pilot.control.job | queue_monitor | job 4400094271 was dequeued from the monitored payloads queue 2019-07-01 06:45:48,104 | INFO | retrieve | pilot.util.auxiliary | make_job_report | 2019-07-01 06:45:48,104 | INFO | retrieve | pilot.util.auxiliary | make_job_report | job summary report 2019-07-01 06:45:48,104 | INFO | retrieve | pilot.util.auxiliary | make_job_report | -------------------------------------------------- 2019-07-01 06:45:48,105 | INFO | retrieve | pilot.util.auxiliary | make_job_report | PanDA job id: 4400094271 2019-07-01 06:45:48,105 | INFO | retrieve | pilot.util.auxiliary | make_job_report | task id: 18410984 2019-07-01 06:45:48,105 | INFO | retrieve | pilot.util.auxiliary | make_job_report | errors: (none) 2019-07-01 06:45:48,105 | INFO | retrieve | pilot.util.auxiliary | make_job_report | status: LOG_TRANSFER = DONE 2019-07-01 06:45:48,105 | INFO | retrieve | pilot.util.auxiliary | make_job_report | pilot state: finished 2019-07-01 06:45:48,105 | INFO | retrieve | pilot.util.auxiliary | make_job_report | transexitcode: 0 2019-07-01 06:45:48,105 | INFO | retrieve | pilot.util.auxiliary | make_job_report | exeerrorcode: 0 2019-07-01 06:45:48,105 | INFO | retrieve | pilot.util.auxiliary | make_job_report | exeerrordiag: 2019-07-01 06:45:48,105 | INFO | retrieve | pilot.util.auxiliary | make_job_report | exitcode: 0 2019-07-01 06:45:48,105 | INFO | retrieve | pilot.util.auxiliary | make_job_report | exitmsg: OK 2019-07-01 06:45:48,106 | INFO | retrieve | pilot.util.auxiliary | make_job_report | cpuconsumptiontime: 36197 s 2019-07-01 06:45:48,106 | INFO | retrieve | pilot.util.auxiliary | make_job_report | nevents: 200 2019-07-01 06:45:48,106 | INFO | retrieve | pilot.util.auxiliary | make_job_report | neventsw: 0 2019-07-01 06:45:48,106 | INFO | retrieve | pilot.util.auxiliary | make_job_report | pid: 15379 2019-07-01 06:45:48,106 | INFO | retrieve | pilot.util.auxiliary | make_job_report | pgrp: None 2019-07-01 06:45:48,106 | INFO | retrieve | pilot.util.auxiliary | make_job_report | corecount: 1 2019-07-01 06:45:48,106 | INFO | retrieve | pilot.util.auxiliary | make_job_report | event service: False 2019-07-01 06:45:48,106 | INFO | retrieve | pilot.util.auxiliary | make_job_report | -------------------------------------------------- 2019-07-01 06:45:48,106 | INFO | retrieve | pilot.util.auxiliary | make_job_report | 2019-07-01 06:45:48,106 | INFO | retrieve | pilot.control.job | has_job_completed | job 4400094271 has completed 2019-07-01 06:45:48,107 | INFO | retrieve | pilot.control.job | retrieve | ready for new job 2019-07-01 06:45:48,107 | DEBUG | retrieve | pilot.control.job | retrieve | getjob_requests=1 2019-07-01 06:45:58,156 | DEBUG | retrieve | pilot.control.job | proceed_with_getjob | proceed_with_getjob called with getjob_requests=1 2019-07-01 06:45:58,157 | DEBUG | retrieve | pilot.util.monitoring | check_local_space | checking local space on /root/Downloads/BOINC/slots/1 2019-07-01 06:45:58,181 | INFO | retrieve | pilot.util.monitoring | check_local_space | sufficient remaining disk space (14152630272 B) 2019-07-01 06:45:58,182 | WARNING | retrieve | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job 2019-07-01 06:45:58,197 | INFO | monitor | pilot.control.monitor | control | monitor control has ended 2019-07-01 06:45:58,441 | DEBUG | data | pilot.control.data | control | data control ending since graceful_stop has been set 2019-07-01 06:45:58,477 | DEBUG | payload | pilot.control.payload | control | payload control ending since graceful_stop has been set 2019-07-01 06:45:58,646 | DEBUG | job | pilot.control.job | control | job control ending since graceful_stop has been set 2019-07-01 06:45:58,801 | WARNING | queue_monitoring | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration 2019-07-01 06:45:58,985 | DEBUG | copytool_in | pilot.control.data | copytool_in | copytool_in ended since graceful_stop has been set 2019-07-01 06:45:59,120 | WARNING | copytool_out | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration 2019-07-01 06:45:59,120 | DEBUG | copytool_out | pilot.control.data | copytool_out | will abort 2019-07-01 06:45:59,140 | INFO | validate_post | pilot.control.payload | validate_post | validate_post has finished 2019-07-01 06:45:59,984 | WARNING | queue_monitor | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration 2019-07-01 06:45:59,984 | INFO | queue_monitor | pilot.control.job | queue_monitor | [job] queue monitor has finished 2019-07-01 06:46:00,121 | DEBUG | copytool_out | pilot.control.data | copytool_out | aborting 2019-07-01 06:46:00,122 | DEBUG | copytool_out | pilot.control.data | copytool_out | copytool_out has finished 2019-07-01 06:46:02,008 | INFO | queue_monitoring | pilot.control.data | queue_monitoring | [data] queue monitor has finished 2019-07-01 06:46:06,249 | WARNING | job_monitor | pilot.control.job | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 62 s) 2019-07-01 06:46:06,250 | INFO | job_monitor | pilot.control.job | job_monitor | job monitor has finished 2019-07-01 06:46:06,250 | INFO | MainThread | pilot.workflow.generic | run | end of generic workflow (traces error code: 0) 2019-07-01 06:46:06,251 | INFO | MainThread | root | wrap_up | traces error code: 0 2019-07-01 06:46:06,251 | INFO | MainThread | root | wrap_up | pilot has finished ***************diag file************ runtimeenvironments=APPS/HEP/ATLAS-SITE; Processors=1 WallTime=39568.52s KernelTime=776.85s UserTime=36246.55s CPUUsage=93% MaxResidentMemory=2020736kB AverageResidentMemory=0kB AverageTotalMemory=0kB AverageUnsharedMemory=0kB AverageUnsharedStack=0kB AverageSharedMemory=0kB PageSize=4096B MajorPageFaults=9744 MinorPageFaults=16316787 Swaps=0 ForcedSwitches=616737 WaitSwitches=23188955 Inputs=3371584 Outputs=311584 SocketReceived=0 SocketSent=0 Signals=0 nodename=maeax@APU8S exitcode=0 ******************************WorkDir*********************** insgesamt 386304 drwxrwx--x. 8 root root 4096 1. Jul 08:46 . drwxr-x--x. 4 root root 4096 30. Jun 21:46 .. -rw-------. 1 root root 7342324 30. Jun 21:47 agis_ddmendpoints.json -rw-------. 1 root root 4710429 30. Jun 21:47 agis_schedconf.cvmfs.json drwx------. 2 root root 4096 30. Jun 21:46 .alrb drwxr-xr-x. 3 root root 4096 30. Jun 21:46 APPS drwxr-xr-x. 2 root root 4096 30. Jun 21:47 .arc -rw-------. 1 root root 549 30. Jun 21:46 .asetup -rw-------. 1 root root 4198 30. Jun 21:47 .asetup.save -rw-r--r--. 1 root root 0 30. Jun 21:46 boinc_lockfile -rw-r--r--. 1 root root 8192 1. Jul 08:46 boinc_mmap_file -rw-r--r--. 1 root root 537 1. Jul 08:45 boinc_task_state.xml -rw-r--r--. 1 root root 378846322 30. Jun 21:46 EVNT.17324038._000510.pool.root.1 -rw-------. 1 root root 45811 1. Jul 08:45 heartbeat.json -rw-r--r--. 1 root root 5469 30. Jun 21:46 init_data.xml -rw-r--r--. 1 root root 246317 30. Jun 21:46 input.tar.gz -rw-r--r--. 1 root root 112 30. Jun 21:46 job.xml -rw-------. 1 root root 492 1. Jul 08:46 JqjLDmzxk1unShfckohDCDFpABFKDmABFKDmqDCMDmABFKDm2ZBsum.diag -rw-------. 1 root root 1811356 1. Jul 08:46 log.18410984._019837.job.log.1 -rw-------. 1 root root 329835 1. Jul 08:45 log.18410984._019837.job.log.tgz.1 -rw-------. 1 root root 306 1. Jul 08:45 memory_monitor_summary.json -rw-------. 1 root root 391 1. Jul 08:46 output.list -rw-------. 1 4871 1028 2885 30. Jun 11:06 pandaJobData.out drwxrwx---. 2 root root 4096 1. Jul 08:45 PanDA_Pilot-4400094271 drwxr-xr-x. 3 501 games 4096 31. Mai 14:36 pilot2 -rw-r--r--. 1 root root 237372 24. Jun 09:16 pilot2.tar.gz -rw-------. 1 root root 1792132 1. Jul 08:46 pilotlog.txt -rw-r--r--. 1 root root 4468 30. Jun 11:06 queuedata.json -rw-r--r--. 1 root root 815 30. Jun 21:46 RTE.tar.gz -rwxr-xr-x. 1 root root 8512 30. Jun 21:46 run_atlas -rwx------. 1 4871 1028 15232 30. Jun 11:06 runpilot2-wrapper.sh -rw-r--r--. 1 root root 692 1. Jul 08:46 runtime_log -rw-r--r--. 1 root root 7087 1. Jul 08:46 runtime_log.err drwxrwx--x. 2 root root 4096 1. Jul 08:46 shared -rw-r--r--. 1 root root 8714 30. Jun 21:46 start_atlas.sh -rw-r--r--. 1 root root 16741 1. Jul 08:46 stderr.txt -rw-r--r--. 1 root root 107 30. Jun 21:46 wrapper_26015_x86_64-pc-linux-gnu -rw-r--r--. 1 root root 28 1. Jul 08:46 wrapper_checkpoint.txt running start_atlas return value is 0 Parent exit 0 child process exit 0 08:46:07 (8741): run_atlas exited; CPU time 36246.859639 08:46:07 (8741): called boinc_finish(0) </stderr_txt> ]]>
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