Name | qRuNDmbY2TvnShfckohDCDFpABFKDmABFKDmQ6FKDmtEFKDmAbSIXo_0 |
Workunit | 1938593 |
Created | 16 Sep 2019, 9:33:28 UTC |
Sent | 16 Sep 2019, 15:39:22 UTC |
Report deadline | 23 Sep 2019, 15:39:22 UTC |
Received | 16 Sep 2019, 16:25:56 UTC |
Server state | Over |
Outcome | Validate error |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 3682 |
Run time | 7 min 6 sec |
CPU time | 2 min 50 sec |
Validate state | Invalid |
Credit | 0.00 |
Device peak FLOPS | 17.83 GFLOPS |
Application version | ATLAS Simulation v0.84 (vbox64_mt_mcore_atlas) x86_64-pc-linux-gnu |
Peak working set size | 133.40 MB |
Peak swap size | 6.87 GB |
Peak disk usage | 3.23 GB |
<core_client_version>7.16.1</core_client_version> <![CDATA[ <stderr_txt> 2019-09-16 18:18:44 (806194): vboxwrapper (7.7.26197): starting 2019-09-16 18:18:44 (806194): Feature: Checkpoint interval offset (31 seconds) 2019-09-16 18:18:44 (806194): Detected: VirtualBox VboxManage Interface (Version: 6.0.12) 2019-09-16 18:18:44 (806194): Detected: Minimum checkpoint interval (900.000000 seconds) 2019-09-16 18:18:44 (806194): Successfully copied 'init_data.xml' to the shared directory. 2019-09-16 18:18:44 (806194): Create VM. (boinc_3324c99643358da6, slot#0) 2019-09-16 18:18:44 (806194): Setting Memory Size for VM. (6600MB) 2019-09-16 18:18:45 (806194): Setting CPU Count for VM. (4) 2019-09-16 18:18:45 (806194): Setting Chipset Options for VM. 2019-09-16 18:18:45 (806194): Setting Boot Options for VM. 2019-09-16 18:18:45 (806194): Setting Network Configuration for NAT. 2019-09-16 18:18:45 (806194): Enabling VM Network Access. 2019-09-16 18:18:45 (806194): Disabling USB Support for VM. 2019-09-16 18:18:45 (806194): Disabling COM Port Support for VM. 2019-09-16 18:18:45 (806194): Disabling LPT Port Support for VM. 2019-09-16 18:18:45 (806194): Disabling Audio Support for VM. 2019-09-16 18:18:45 (806194): Disabling Clipboard Support for VM. 2019-09-16 18:18:45 (806194): Disabling Drag and Drop Support for VM. 2019-09-16 18:18:45 (806194): Adding storage controller(s) to VM. 2019-09-16 18:18:45 (806194): Adding virtual disk drive to VM. (vm_image.vdi) 2019-09-16 18:18:45 (806194): Adding VirtualBox Guest Additions to VM. 2019-09-16 18:18:45 (806194): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB) 2019-09-16 18:18:45 (806194): forwarding host port 31719 to guest port 80 2019-09-16 18:18:45 (806194): Enabling remote desktop for VM. 2019-09-16 18:18:45 (806194): Required extension pack not installed, remote desktop not enabled. 2019-09-16 18:18:45 (806194): Enabling shared directory for VM. 2019-09-16 18:18:46 (806194): Starting VM. (boinc_3324c99643358da6, slot#0) 2019-09-16 18:18:47 (806194): Successfully started VM. (PID = '806669') 2019-09-16 18:18:47 (806194): Reporting VM Process ID to BOINC. 2019-09-16 18:18:47 (806194): Guest Log: BIOS: VirtualBox 6.0.12 2019-09-16 18:18:47 (806194): Guest Log: CPUID EDX: 0x178bfbff 2019-09-16 18:18:47 (806194): Guest Log: BIOS: ata0-0: PCHS=16383/16/63 LCHS=1024/255/63 2019-09-16 18:18:47 (806194): VM state change detected. (old = 'poweroff', new = 'running') 2019-09-16 18:18:47 (806194): Detected: Web Application Enabled (http://localhost:31719) 2019-09-16 18:18:47 (806194): Preference change detected 2019-09-16 18:18:47 (806194): Setting CPU throttle for VM. (100%) 2019-09-16 18:18:47 (806194): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds)) 2019-09-16 18:18:49 (806194): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032 2019-09-16 18:18:49 (806194): Guest Log: BIOS: Booting from Hard Disk... 2019-09-16 18:18:51 (806194): Guest Log: BIOS: KBD: unsupported int 16h function 03 2019-09-16 18:18:51 (806194): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 2019-09-16 18:18:51 (806194): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81 2019-09-16 18:18:51 (806194): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81 2019-09-16 18:18:51 (806194): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82 2019-09-16 18:18:51 (806194): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82 2019-09-16 18:18:51 (806194): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83 2019-09-16 18:18:51 (806194): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83 2019-09-16 18:18:51 (806194): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84 2019-09-16 18:18:51 (806194): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84 2019-09-16 18:18:51 (806194): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85 2019-09-16 18:18:51 (806194): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85 2019-09-16 18:18:51 (806194): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86 2019-09-16 18:18:51 (806194): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86 2019-09-16 18:18:51 (806194): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87 2019-09-16 18:18:51 (806194): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87 2019-09-16 18:18:51 (806194): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88 2019-09-16 18:18:51 (806194): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88 2019-09-16 18:18:51 (806194): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89 2019-09-16 18:18:51 (806194): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89 2019-09-16 18:18:51 (806194): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a 2019-09-16 18:18:51 (806194): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a 2019-09-16 18:18:51 (806194): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b 2019-09-16 18:18:51 (806194): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b 2019-09-16 18:18:51 (806194): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c 2019-09-16 18:18:51 (806194): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c 2019-09-16 18:18:51 (806194): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d 2019-09-16 18:18:51 (806194): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d 2019-09-16 18:18:51 (806194): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e 2019-09-16 18:18:51 (806194): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e 2019-09-16 18:18:51 (806194): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f 2019-09-16 18:18:51 (806194): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f 2019-09-16 18:18:53 (806194): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds 2019-09-16 18:18:53 (806194): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000) 2019-09-16 18:18:57 (806194): Guest Log: Checking CVMFS... 2019-09-16 18:18:58 (806194): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log 2019-09-16 18:18:58 (806194): Guest Log: 00:00:00.000132 main Log opened 2019-09-16T18:18:56.339482000Z 2019-09-16 18:18:58 (806194): Guest Log: 00:00:00.000206 main OS Product: Linux 2019-09-16 18:18:58 (806194): Guest Log: 00:00:00.000228 main OS Release: 3.10.0-957.27.2.el7.x86_64 2019-09-16 18:18:58 (806194): Guest Log: 00:00:00.000245 main OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019 2019-09-16 18:18:58 (806194): Guest Log: 00:00:00.000261 main Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService 2019-09-16 18:18:58 (806194): Guest Log: 00:00:00.000261 main Process ID: 1568 2019-09-16 18:18:58 (806194): Guest Log: 00:00:00.000262 main Package type: LINUX_64BITS_GENERIC 2019-09-16 18:18:58 (806194): Guest Log: 00:00:00.000968 main 5.2.32 r132073 started. Verbose level = 0 2019-09-16 18:19:00 (806194): Guest Log: CVMFS is ok 2019-09-16 18:19:00 (806194): Guest Log: Mounting shared directory 2019-09-16 18:19:00 (806194): Guest Log: Copying input files 2019-09-16 18:19:01 (806194): Guest Log: Copied input files into RunAtlas. 2019-09-16 18:19:01 (806194): Guest Log: copied the webapp to /var/www 2019-09-16 18:19:01 (806194): Guest Log: set up http_proxy http://pcoslo5:3128 2019-09-16 18:19:01 (806194): Guest Log: Detected squid proxy http://pcoslo5:3128 - will set in /etc/cvmfs/default.local 2019-09-16 18:19:08 (806194): Guest Log: 00:00:10.005028 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 862 537 000ns (GuestNow=1 568 650 747 478 897 000 ns GuestLast=1 568 657 936 341 434 000 ns fSetTimeLastLoop=true ) 2019-09-16 18:21:05 (806194): Guest Log: ATHENA_PROC_NUMBER=4 2019-09-16 18:21:05 (806194): Guest Log: *** Starting ATLAS job. (PandaID=4002876565 taskID=000649-3) *** 2019-09-16 18:25:42 (806194): Guest Log: *** Job finished *** 2019-09-16 18:25:42 (806194): Guest Log: *** The last 20 lines of the pilot log: *** 2019-09-16 18:25:42 (806194): Guest Log: 2019-09-16 16:25:40 UTC [wrapper] apfmon messages muted 2019-09-16 18:25:42 (806194): Guest Log: ---- find pandaID.out ---- 2019-09-16 18:25:42 (806194): Guest Log: total 56 2019-09-16 18:25:42 (806194): Guest Log: -rw-------. 1 atlas atlas 11357 Jul 25 14:38 LICENSE 2019-09-16 18:25:42 (806194): Guest Log: -rw-------. 1 atlas atlas 20 Sep 9 11:04 MANIFEST.IN 2019-09-16 18:25:42 (806194): Guest Log: -rw-------. 1 atlas atlas 11 Sep 16 16:21 pandaIDs.out 2019-09-16 18:25:42 (806194): Guest Log: drwx------. 14 atlas atlas 216 Sep 16 16:21 pilot 2019-09-16 18:25:42 (806194): Guest Log: -rwx------. 1 atlas atlas 20136 Sep 9 11:04 pilot.py 2019-09-16 18:25:42 (806194): Guest Log: -rw-------. 1 atlas atlas 9 Sep 9 11:04 PILOTVERSION 2019-09-16 18:25:42 (806194): Guest Log: -rw-------. 1 atlas atlas 2251 Jul 25 14:38 README.md 2019-09-16 18:25:42 (806194): Guest Log: -rw-------. 1 atlas atlas 760 Aug 22 09:01 setup.py 2019-09-16 18:25:42 (806194): Guest Log: -rw-------. 1 atlas atlas 221 Jul 25 14:38 TODO.md 2019-09-16 18:25:42 (806194): Guest Log: -rw-------. 1 atlas atlas 11 Sep 16 16:21 /home/atlas/RunAtlas/pilot2/pandaIDs.out 2019-09-16 18:25:42 (806194): Guest Log: 4002876565 2019-09-16 18:25:42 (806194): Guest Log: 2019-09-16 16:25:41 UTC [wrapper] Test setup, not cleaning 2019-09-16 18:25:42 (806194): Guest Log: 2019-09-16 16:25:41 UTC [wrapper] ==== wrapper stdout END ==== 2019-09-16 18:25:42 (806194): Guest Log: 2019-09-16 16:25:41 UTC [wrapper] ==== wrapper stderr END ==== 2019-09-16 18:25:42 (806194): Guest Log: 2019-09-16 16:25:41 UTC [wrapper] wrapper wrapperexiting ec=0, duration=277 2019-09-16 18:25:42 (806194): Guest Log: 2019-09-16 16:25:41 UTC [wrapper] apfmon messages muted 2019-09-16 18:25:42 (806194): Guest Log: *** Error codes and diagnostics *** 2019-09-16 18:25:42 (806194): Guest Log: "exeErrorCode": 65, 2019-09-16 18:25:42 (806194): Guest Log: "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"Segmentation fault: Event counter: 0; Run: unknown; Evt: unknown; Current algorithm: PyG4AtlasAlg; Current Function: unknown\"", 2019-09-16 18:25:42 (806194): Guest Log: "pilotErrorCode": 0, 2019-09-16 18:25:42 (806194): Guest Log: "pilotErrorDiag": "", 2019-09-16 18:25:42 (806194): Guest Log: *** Listing of results directory *** 2019-09-16 18:25:42 (806194): Guest Log: total 12436 2019-09-16 18:25:42 (806194): Guest Log: -rw-r--r--. 1 atlas atlas 259319 Sep 16 09:27 pilot2.tar.gz 2019-09-16 18:25:42 (806194): Guest Log: -rw-r--r--. 1 atlas atlas 4480 Sep 16 09:30 queuedata.json 2019-09-16 18:25:42 (806194): Guest Log: -rwx------. 1 atlas atlas 12641 Sep 16 09:33 runpilot2-wrapper.sh 2019-09-16 18:25:42 (806194): Guest Log: -rw-------. 1 atlas atlas 2938 Sep 16 09:33 pandaJobData.out 2019-09-16 18:25:42 (806194): Guest Log: -rw-r--r--. 1 atlas atlas 267443 Sep 16 16:19 input.tar.gz 2019-09-16 18:25:42 (806194): Guest Log: -rw-r--r--. 1 atlas atlas 8465 Sep 16 16:19 start_atlas.sh 2019-09-16 18:25:42 (806194): Guest Log: -rw-r--r--. 1 atlas atlas 815 Sep 16 16:19 RTE.tar.gz 2019-09-16 18:25:42 (806194): Guest Log: -rw-r--r--. 1 atlas atlas 6261 Sep 16 16:19 init_data.xml 2019-09-16 18:25:42 (806194): Guest Log: lrwxrwxrwx. 1 atlas atlas 20 Sep 16 16:19 EVNT.14296418._001447.pool.root.1 -> /data/./ATLAS.root_0 2019-09-16 18:25:42 (806194): Guest Log: drwxr-xr-x. 3 atlas atlas 17 Sep 16 16:21 APPS 2019-09-16 18:25:42 (806194): Guest Log: -rw-------. 1 atlas atlas 240 Sep 16 16:21 setup.sh.local 2019-09-16 18:25:42 (806194): Guest Log: -rw-------. 1 atlas atlas 4060514 Sep 16 16:21 agis_schedconf.cvmfs.json 2019-09-16 18:25:42 (806194): Guest Log: -rw-------. 1 atlas atlas 7568796 Sep 16 16:21 agis_ddmendpoints.json 2019-09-16 18:25:42 (806194): Guest Log: drwx------. 3 atlas atlas 229 Sep 16 16:21 pilot2 2019-09-16 18:25:42 (806194): Guest Log: -rw-------. 1 atlas atlas 833 Sep 16 16:24 memory_monitor_summary.json 2019-09-16 18:25:42 (806194): Guest Log: -rw-------. 1 atlas atlas 86479 Sep 16 16:24 log.000649-399158-8559._078090.job.log.tgz.1 2019-09-16 18:25:42 (806194): Guest Log: -rw-------. 1 atlas atlas 9863 Sep 16 16:24 heartbeat.json 2019-09-16 18:25:42 (806194): Guest Log: -rw-------. 1 atlas atlas 11351 Sep 16 16:25 pilotlog.txt 2019-09-16 18:25:42 (806194): Guest Log: -rw-------. 1 atlas atlas 131185 Sep 16 16:25 log.14568781._078090.job.log.1 2019-09-16 18:25:42 (806194): Guest Log: -rw-------. 1 atlas atlas 497 Sep 16 16:25 qRuNDmbY2TvnShfckohDCDFpABFKDmABFKDmQ6FKDmtEFKDmAbSIXo.diag 2019-09-16 18:25:42 (806194): Guest Log: -rw-r--r--. 1 atlas atlas 7579 Sep 16 16:25 runtime_log.err 2019-09-16 18:25:42 (806194): Guest Log: -rw-------. 1 atlas atlas 261 Sep 16 16:25 output.list 2019-09-16 18:25:42 (806194): Guest Log: -rw-r--r--. 1 atlas atlas 716 Sep 16 16:25 runtime_log 2019-09-16 18:25:42 (806194): Guest Log: -rw-------. 1 atlas atlas 235520 Sep 16 16:25 result.tar.gz 2019-09-16 18:25:42 (806194): Guest Log: Looking for outputfile HITS.000649-399158-8559._078090.pool.root.1 2019-09-16 18:25:42 (806194): Guest Log: No HITS file was produced 2019-09-16 18:25:42 (806194): Guest Log: Successfully finished the ATLAS job! 2019-09-16 18:25:42 (806194): Guest Log: Copying the results back to the shared directory! 2019-09-16 18:25:42 (806194): Guest Log: *** Contents of shared directory: *** 2019-09-16 18:25:42 (806194): Guest Log: total 357212 2019-09-16 18:25:42 (806194): Guest Log: -rw-r--r--. 1 root root 365251149 Sep 16 16:18 ATLAS.root_0 2019-09-16 18:25:42 (806194): Guest Log: -rw-r--r--. 1 root root 6261 Sep 16 16:18 init_data.xml 2019-09-16 18:25:42 (806194): Guest Log: -rw-r--r--. 1 root root 267443 Sep 16 16:18 input.tar.gz 2019-09-16 18:25:42 (806194): Guest Log: -rw-r--r--. 1 root root 235520 Sep 16 16:25 result.tar.gz 2019-09-16 18:25:42 (806194): Guest Log: -rw-r--r--. 1 root root 815 Sep 16 16:18 RTE.tar.gz 2019-09-16 18:25:42 (806194): Guest Log: -rw-r--r--. 1 root root 8465 Sep 16 16:18 start_atlas.sh 2019-09-16 18:25:42 (806194): Guest Log: *** Success! Shutting down the machine. *** 2019-09-16 18:25:42 (806194): VM Completion File Detected. 2019-09-16 18:25:42 (806194): Powering off VM. 2019-09-16 18:25:42 (806194): Successfully stopped VM. 2019-09-16 18:25:42 (806194): Deregistering VM. (boinc_3324c99643358da6, slot#0) 2019-09-16 18:25:42 (806194): Removing network bandwidth throttle group from VM. 2019-09-16 18:25:42 (806194): Removing storage controller(s) from VM. 2019-09-16 18:25:42 (806194): Removing VM from VirtualBox. 2019-09-16 18:25:42 (806194): Removing virtual disk drive from VirtualBox. 18:25:48 (806194): called boinc_finish(0) </stderr_txt> ]]>
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