Name | RYaLDmTZ2TvnShfckohDCDFpABFKDmABFKDm67rKDmABFKDmlcGh3m_0 |
Workunit | 1938605 |
Created | 16 Sep 2019, 9:34:03 UTC |
Sent | 16 Sep 2019, 21:09:07 UTC |
Report deadline | 23 Sep 2019, 21:09:07 UTC |
Received | 16 Sep 2019, 21:53:19 UTC |
Server state | Over |
Outcome | Validate error |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 3682 |
Run time | 6 min 3 sec |
CPU time | 2 min 47 sec |
Validate state | Invalid |
Credit | 0.00 |
Device peak FLOPS | 17.83 GFLOPS |
Application version | ATLAS Simulation v0.84 (vbox64_mt_mcore_atlas) x86_64-pc-linux-gnu |
Peak working set size | 467.85 MB |
Peak swap size | 7.24 GB |
Peak disk usage | 3.65 GB |
<core_client_version>7.16.1</core_client_version> <![CDATA[ <stderr_txt> 2019-09-16 23:47:08 (1216119): vboxwrapper (7.7.26197): starting 2019-09-16 23:47:08 (1216119): Feature: Checkpoint interval offset (213 seconds) 2019-09-16 23:47:08 (1216119): Detected: VirtualBox VboxManage Interface (Version: 6.0.12) 2019-09-16 23:47:08 (1216119): Detected: Minimum checkpoint interval (900.000000 seconds) 2019-09-16 23:47:08 (1216119): Successfully copied 'init_data.xml' to the shared directory. 2019-09-16 23:47:08 (1216119): Create VM. (boinc_4ddf77ce9fafabdc, slot#0) 2019-09-16 23:47:08 (1216119): Setting Memory Size for VM. (6600MB) 2019-09-16 23:47:08 (1216119): Setting CPU Count for VM. (4) 2019-09-16 23:47:08 (1216119): Setting Chipset Options for VM. 2019-09-16 23:47:08 (1216119): Setting Boot Options for VM. 2019-09-16 23:47:08 (1216119): Setting Network Configuration for NAT. 2019-09-16 23:47:08 (1216119): Enabling VM Network Access. 2019-09-16 23:47:08 (1216119): Disabling USB Support for VM. 2019-09-16 23:47:09 (1216119): Disabling COM Port Support for VM. 2019-09-16 23:47:09 (1216119): Disabling LPT Port Support for VM. 2019-09-16 23:47:09 (1216119): Disabling Audio Support for VM. 2019-09-16 23:47:09 (1216119): Disabling Clipboard Support for VM. 2019-09-16 23:47:09 (1216119): Disabling Drag and Drop Support for VM. 2019-09-16 23:47:09 (1216119): Adding storage controller(s) to VM. 2019-09-16 23:47:09 (1216119): Adding virtual disk drive to VM. (vm_image.vdi) 2019-09-16 23:47:09 (1216119): Adding VirtualBox Guest Additions to VM. 2019-09-16 23:47:09 (1216119): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB) 2019-09-16 23:47:09 (1216119): forwarding host port 7841 to guest port 80 2019-09-16 23:47:09 (1216119): Enabling remote desktop for VM. 2019-09-16 23:47:09 (1216119): Required extension pack not installed, remote desktop not enabled. 2019-09-16 23:47:09 (1216119): Enabling shared directory for VM. 2019-09-16 23:47:09 (1216119): Starting VM. (boinc_4ddf77ce9fafabdc, slot#0) 2019-09-16 23:47:10 (1216119): Successfully started VM. (PID = '1216595') 2019-09-16 23:47:10 (1216119): Reporting VM Process ID to BOINC. 2019-09-16 23:47:10 (1216119): Guest Log: BIOS: VirtualBox 6.0.12 2019-09-16 23:47:10 (1216119): Guest Log: CPUID EDX: 0x178bfbff 2019-09-16 23:47:10 (1216119): Guest Log: BIOS: ata0-0: PCHS=16383/16/63 LCHS=1024/255/63 2019-09-16 23:47:11 (1216119): VM state change detected. (old = 'poweroff', new = 'running') 2019-09-16 23:47:11 (1216119): Detected: Web Application Enabled (http://localhost:7841) 2019-09-16 23:47:11 (1216119): Preference change detected 2019-09-16 23:47:11 (1216119): Setting CPU throttle for VM. (100%) 2019-09-16 23:47:11 (1216119): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds)) 2019-09-16 23:47:13 (1216119): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032 2019-09-16 23:47:13 (1216119): Guest Log: BIOS: Booting from Hard Disk... 2019-09-16 23:47:15 (1216119): Guest Log: BIOS: KBD: unsupported int 16h function 03 2019-09-16 23:47:15 (1216119): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 2019-09-16 23:47:15 (1216119): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81 2019-09-16 23:47:15 (1216119): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81 2019-09-16 23:47:15 (1216119): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82 2019-09-16 23:47:15 (1216119): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82 2019-09-16 23:47:15 (1216119): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83 2019-09-16 23:47:15 (1216119): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83 2019-09-16 23:47:15 (1216119): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84 2019-09-16 23:47:15 (1216119): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84 2019-09-16 23:47:15 (1216119): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85 2019-09-16 23:47:15 (1216119): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85 2019-09-16 23:47:15 (1216119): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86 2019-09-16 23:47:15 (1216119): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86 2019-09-16 23:47:15 (1216119): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87 2019-09-16 23:47:15 (1216119): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87 2019-09-16 23:47:15 (1216119): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88 2019-09-16 23:47:15 (1216119): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88 2019-09-16 23:47:15 (1216119): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89 2019-09-16 23:47:15 (1216119): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89 2019-09-16 23:47:15 (1216119): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a 2019-09-16 23:47:15 (1216119): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a 2019-09-16 23:47:15 (1216119): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b 2019-09-16 23:47:15 (1216119): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b 2019-09-16 23:47:15 (1216119): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c 2019-09-16 23:47:15 (1216119): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c 2019-09-16 23:47:15 (1216119): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d 2019-09-16 23:47:15 (1216119): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d 2019-09-16 23:47:15 (1216119): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e 2019-09-16 23:47:15 (1216119): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e 2019-09-16 23:47:15 (1216119): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f 2019-09-16 23:47:15 (1216119): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f 2019-09-16 23:47:17 (1216119): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds 2019-09-16 23:47:17 (1216119): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000) 2019-09-16 23:47:19 (1216119): Guest Log: Checking CVMFS... 2019-09-16 23:47:21 (1216119): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log 2019-09-16 23:47:21 (1216119): Guest Log: 00:00:00.000132 main Log opened 2019-09-16T23:47:19.728321000Z 2019-09-16 23:47:21 (1216119): Guest Log: 00:00:00.000214 main OS Product: Linux 2019-09-16 23:47:21 (1216119): Guest Log: 00:00:00.000238 main OS Release: 3.10.0-957.27.2.el7.x86_64 2019-09-16 23:47:21 (1216119): Guest Log: 00:00:00.000256 main OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019 2019-09-16 23:47:21 (1216119): Guest Log: 00:00:00.000273 main Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService 2019-09-16 23:47:21 (1216119): Guest Log: 00:00:00.000273 main Process ID: 1690 2019-09-16 23:47:21 (1216119): Guest Log: 00:00:00.000274 main Package type: LINUX_64BITS_GENERIC 2019-09-16 23:47:21 (1216119): Guest Log: 00:00:00.001029 main 5.2.32 r132073 started. Verbose level = 0 2019-09-16 23:47:22 (1216119): Guest Log: CVMFS is ok 2019-09-16 23:47:22 (1216119): Guest Log: Mounting shared directory 2019-09-16 23:47:22 (1216119): Guest Log: Copying input files 2019-09-16 23:47:23 (1216119): Guest Log: Copied input files into RunAtlas. 2019-09-16 23:47:23 (1216119): Guest Log: copied the webapp to /var/www 2019-09-16 23:47:23 (1216119): Guest Log: set up http_proxy http://pcoslo5:3128 2019-09-16 23:47:23 (1216119): Guest Log: Detected squid proxy http://pcoslo5:3128 - will set in /etc/cvmfs/default.local 2019-09-16 23:47:31 (1216119): Guest Log: 00:00:10.002627 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 222 748 000ns (GuestNow=1 568 670 451 507 513 000 ns GuestLast=1 568 677 639 730 261 000 ns fSetTimeLastLoop=true ) 2019-09-16 23:49:28 (1216119): Guest Log: ATHENA_PROC_NUMBER=4 2019-09-16 23:49:29 (1216119): Guest Log: *** Starting ATLAS job. (PandaID=4002876565 taskID=000649-3) *** 2019-09-16 23:53:02 (1216119): Guest Log: *** Job finished *** 2019-09-16 23:53:02 (1216119): Guest Log: *** The last 20 lines of the pilot log: *** 2019-09-16 23:53:02 (1216119): Guest Log: 2019-09-16 21:53:02 UTC [wrapper] apfmon messages muted 2019-09-16 23:53:02 (1216119): Guest Log: ---- find pandaID.out ---- 2019-09-16 23:53:02 (1216119): Guest Log: total 56 2019-09-16 23:53:02 (1216119): Guest Log: -rw-------. 1 atlas atlas 11357 Jul 25 14:38 LICENSE 2019-09-16 23:53:02 (1216119): Guest Log: -rw-------. 1 atlas atlas 20 Sep 9 11:04 MANIFEST.IN 2019-09-16 23:53:02 (1216119): Guest Log: -rw-------. 1 atlas atlas 11 Sep 16 21:49 pandaIDs.out 2019-09-16 23:53:02 (1216119): Guest Log: drwx------. 14 atlas atlas 216 Sep 16 21:49 pilot 2019-09-16 23:53:02 (1216119): Guest Log: -rwx------. 1 atlas atlas 20136 Sep 9 11:04 pilot.py 2019-09-16 23:53:02 (1216119): Guest Log: -rw-------. 1 atlas atlas 9 Sep 9 11:04 PILOTVERSION 2019-09-16 23:53:02 (1216119): Guest Log: -rw-------. 1 atlas atlas 2251 Jul 25 14:38 README.md 2019-09-16 23:53:02 (1216119): Guest Log: -rw-------. 1 atlas atlas 760 Aug 22 09:01 setup.py 2019-09-16 23:53:02 (1216119): Guest Log: -rw-------. 1 atlas atlas 221 Jul 25 14:38 TODO.md 2019-09-16 23:53:02 (1216119): Guest Log: -rw-------. 1 atlas atlas 11 Sep 16 21:49 /home/atlas/RunAtlas/pilot2/pandaIDs.out 2019-09-16 23:53:02 (1216119): Guest Log: 4002876565 2019-09-16 23:53:02 (1216119): Guest Log: 2019-09-16 21:53:02 UTC [wrapper] Test setup, not cleaning 2019-09-16 23:53:02 (1216119): Guest Log: 2019-09-16 21:53:02 UTC [wrapper] ==== wrapper stdout END ==== 2019-09-16 23:53:02 (1216119): Guest Log: 2019-09-16 21:53:02 UTC [wrapper] ==== wrapper stderr END ==== 2019-09-16 23:53:02 (1216119): Guest Log: 2019-09-16 21:53:02 UTC [wrapper] wrapper wrapperexiting ec=0, duration=214 2019-09-16 23:53:02 (1216119): Guest Log: 2019-09-16 21:53:02 UTC [wrapper] apfmon messages muted 2019-09-16 23:53:02 (1216119): Guest Log: *** Error codes and diagnostics *** 2019-09-16 23:53:02 (1216119): Guest Log: "exeErrorCode": 65, 2019-09-16 23:53:02 (1216119): Guest Log: "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"Segmentation fault: Event counter: 0; Run: unknown; Evt: unknown; Current algorithm: PyG4AtlasAlg; Current Function: unknown\"", 2019-09-16 23:53:02 (1216119): Guest Log: "pilotErrorCode": 0, 2019-09-16 23:53:02 (1216119): Guest Log: "pilotErrorDiag": "", 2019-09-16 23:53:02 (1216119): Guest Log: *** Listing of results directory *** 2019-09-16 23:53:02 (1216119): Guest Log: total 12428 2019-09-16 23:53:02 (1216119): Guest Log: -rw-r--r--. 1 atlas atlas 259319 Sep 16 09:27 pilot2.tar.gz 2019-09-16 23:53:02 (1216119): Guest Log: -rw-r--r--. 1 atlas atlas 4480 Sep 16 09:30 queuedata.json 2019-09-16 23:53:02 (1216119): Guest Log: -rw-------. 1 atlas atlas 2938 Sep 16 09:33 pandaJobData.out 2019-09-16 23:53:02 (1216119): Guest Log: -rwx------. 1 atlas atlas 12641 Sep 16 09:33 runpilot2-wrapper.sh 2019-09-16 23:53:02 (1216119): Guest Log: -rw-r--r--. 1 atlas atlas 267438 Sep 16 21:47 input.tar.gz 2019-09-16 23:53:02 (1216119): Guest Log: -rw-r--r--. 1 atlas atlas 815 Sep 16 21:47 RTE.tar.gz 2019-09-16 23:53:02 (1216119): Guest Log: -rw-r--r--. 1 atlas atlas 8505 Sep 16 21:47 start_atlas.sh 2019-09-16 23:53:02 (1216119): Guest Log: -rw-r--r--. 1 atlas atlas 6262 Sep 16 21:47 init_data.xml 2019-09-16 23:53:02 (1216119): Guest Log: lrwxrwxrwx. 1 atlas atlas 20 Sep 16 21:47 EVNT.14296418._001447.pool.root.1 -> /data/./ATLAS.root_0 2019-09-16 23:53:02 (1216119): Guest Log: drwxr-xr-x. 3 atlas atlas 17 Sep 16 21:49 APPS 2019-09-16 23:53:02 (1216119): Guest Log: -rw-------. 1 atlas atlas 240 Sep 16 21:49 setup.sh.local 2019-09-16 23:53:02 (1216119): Guest Log: -rw-------. 1 atlas atlas 4060557 Sep 16 21:49 agis_schedconf.cvmfs.json 2019-09-16 23:53:02 (1216119): Guest Log: -rw-------. 1 atlas atlas 7568796 Sep 16 21:49 agis_ddmendpoints.json 2019-09-16 23:53:02 (1216119): Guest Log: drwx------. 3 atlas atlas 229 Sep 16 21:49 pilot2 2019-09-16 23:53:02 (1216119): Guest Log: -rw-------. 1 atlas atlas 826 Sep 16 21:52 memory_monitor_summary.json 2019-09-16 23:53:02 (1216119): Guest Log: -rw-------. 1 atlas atlas 86008 Sep 16 21:52 log.000649-399697-1278._078090.job.log.tgz.1 2019-09-16 23:53:02 (1216119): Guest Log: -rw-------. 1 atlas atlas 9862 Sep 16 21:52 heartbeat.json 2019-09-16 23:53:02 (1216119): Guest Log: -rw-------. 1 atlas atlas 11278 Sep 16 21:53 pilotlog.txt 2019-09-16 23:53:02 (1216119): Guest Log: -rw-------. 1 atlas atlas 130782 Sep 16 21:53 log.14568781._078090.job.log.1 2019-09-16 23:53:02 (1216119): Guest Log: -rw-------. 1 atlas atlas 497 Sep 16 21:53 RYaLDmTZ2TvnShfckohDCDFpABFKDmABFKDm67rKDmABFKDmlcGh3m.diag 2019-09-16 23:53:02 (1216119): Guest Log: -rw-r--r--. 1 atlas atlas 7659 Sep 16 21:53 runtime_log.err 2019-09-16 23:53:02 (1216119): Guest Log: -rw-------. 1 atlas atlas 261 Sep 16 21:53 output.list 2019-09-16 23:53:02 (1216119): Guest Log: -rw-r--r--. 1 atlas atlas 716 Sep 16 21:53 runtime_log 2019-09-16 23:53:02 (1216119): Guest Log: -rw-------. 1 atlas atlas 235520 Sep 16 21:53 result.tar.gz 2019-09-16 23:53:02 (1216119): Guest Log: Looking for outputfile HITS.000649-399697-1278._078090.pool.root.1 2019-09-16 23:53:02 (1216119): Guest Log: No HITS file was produced 2019-09-16 23:53:02 (1216119): Guest Log: Successfully finished the ATLAS job! 2019-09-16 23:53:02 (1216119): Guest Log: Copying the results back to the shared directory! 2019-09-16 23:53:03 (1216119): Guest Log: *** Contents of shared directory: *** 2019-09-16 23:53:03 (1216119): Guest Log: total 357212 2019-09-16 23:53:03 (1216119): Guest Log: -rw-r--r--. 1 root root 365251149 Sep 16 21:47 ATLAS.root_0 2019-09-16 23:53:03 (1216119): Guest Log: -rw-r--r--. 1 root root 6262 Sep 16 21:47 init_data.xml 2019-09-16 23:53:03 (1216119): Guest Log: -rw-r--r--. 1 root root 267438 Sep 16 21:47 input.tar.gz 2019-09-16 23:53:03 (1216119): Guest Log: -rw-r--r--. 1 root root 235520 Sep 16 21:53 result.tar.gz 2019-09-16 23:53:03 (1216119): Guest Log: -rw-r--r--. 1 root root 815 Sep 16 21:47 RTE.tar.gz 2019-09-16 23:53:03 (1216119): Guest Log: -rw-r--r--. 1 root root 8505 Sep 16 21:47 start_atlas.sh 2019-09-16 23:53:03 (1216119): Guest Log: *** Success! Shutting down the machine. *** 2019-09-16 23:53:03 (1216119): VM Completion File Detected. 2019-09-16 23:53:03 (1216119): Powering off VM. 2019-09-16 23:53:03 (1216119): Successfully stopped VM. 2019-09-16 23:53:03 (1216119): Deregistering VM. (boinc_4ddf77ce9fafabdc, slot#0) 2019-09-16 23:53:03 (1216119): Removing network bandwidth throttle group from VM. 2019-09-16 23:53:04 (1216119): Removing storage controller(s) from VM. 2019-09-16 23:53:04 (1216119): Removing VM from VirtualBox. 2019-09-16 23:53:04 (1216119): Removing virtual disk drive from VirtualBox. 23:53:09 (1216119): called boinc_finish(0) </stderr_txt> ]]>
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