Name C8aKDm8ecSvnShfckohDCDFpABFKDmABFKDmQ6FKDmkDFKDmpnV7cm_2
Workunit 1937858
Created 19 Sep 2019, 19:42:36 UTC
Sent 23 Sep 2019, 10:20:00 UTC
Report deadline 30 Sep 2019, 10:20:00 UTC
Received 24 Sep 2019, 3:00:10 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 3682
Run time 14 min 59 sec
CPU time 27 min 46 sec
Validate state Valid
Credit 37.10
Device peak FLOPS 17.83 GFLOPS
Application version ATLAS Simulation v0.84 (vbox64_mt_mcore_atlas)
x86_64-pc-linux-gnu
Peak working set size 132.23 MB
Peak swap size 8.05 GB
Peak disk usage 3.27 GB

Stderr output

<core_client_version>7.16.1</core_client_version>
<![CDATA[
<stderr_txt>
2019-09-24 04:44:03 (1257785): vboxwrapper (7.7.26197): starting
2019-09-24 04:44:03 (1257785): Feature: Checkpoint interval offset (64 seconds)
2019-09-24 04:44:03 (1257785): Detected: VirtualBox VboxManage Interface (Version: 6.0.12)
2019-09-24 04:44:03 (1257785): Detected: Minimum checkpoint interval (900.000000 seconds)
2019-09-24 04:44:03 (1257785): Successfully copied 'init_data.xml' to the shared directory.
2019-09-24 04:44:03 (1257785): Create VM. (boinc_d474dfe171c4ead7, slot#0)
2019-09-24 04:44:03 (1257785): Setting Memory Size for VM. (6600MB)
2019-09-24 04:44:03 (1257785): Setting CPU Count for VM. (4)
2019-09-24 04:44:03 (1257785): Setting Chipset Options for VM.
2019-09-24 04:44:03 (1257785): Setting Boot Options for VM.
2019-09-24 04:44:03 (1257785): Setting Network Configuration for NAT.
2019-09-24 04:44:03 (1257785): Enabling VM Network Access.
2019-09-24 04:44:03 (1257785): Disabling USB Support for VM.
2019-09-24 04:44:04 (1257785): Disabling COM Port Support for VM.
2019-09-24 04:44:04 (1257785): Disabling LPT Port Support for VM.
2019-09-24 04:44:04 (1257785): Disabling Audio Support for VM.
2019-09-24 04:44:04 (1257785): Disabling Clipboard Support for VM.
2019-09-24 04:44:04 (1257785): Disabling Drag and Drop Support for VM.
2019-09-24 04:44:04 (1257785): Adding storage controller(s) to VM.
2019-09-24 04:44:04 (1257785): Adding virtual disk drive to VM. (vm_image.vdi)
2019-09-24 04:44:04 (1257785): Adding VirtualBox Guest Additions to VM.
2019-09-24 04:44:04 (1257785): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2019-09-24 04:44:04 (1257785): forwarding host port 25290 to guest port 80
2019-09-24 04:44:04 (1257785): Enabling remote desktop for VM.
2019-09-24 04:44:04 (1257785): Required extension pack not installed, remote desktop not enabled.
2019-09-24 04:44:04 (1257785): Enabling shared directory for VM.
2019-09-24 04:44:04 (1257785): Starting VM. (boinc_d474dfe171c4ead7, slot#0)
2019-09-24 04:44:05 (1257785): Successfully started VM. (PID = '1258237')
2019-09-24 04:44:05 (1257785): Reporting VM Process ID to BOINC.
2019-09-24 04:44:06 (1257785): Guest Log: BIOS: VirtualBox 6.0.12
2019-09-24 04:44:06 (1257785): Guest Log: CPUID EDX: 0x178bfbff
2019-09-24 04:44:06 (1257785): Guest Log: BIOS: ata0-0: PCHS=16383/16/63 LCHS=1024/255/63
2019-09-24 04:44:06 (1257785): VM state change detected. (old = 'poweroff', new = 'running')
2019-09-24 04:44:06 (1257785): Detected: Web Application Enabled (http://localhost:25290)
2019-09-24 04:44:06 (1257785): Preference change detected
2019-09-24 04:44:06 (1257785): Setting CPU throttle for VM. (100%)
2019-09-24 04:44:06 (1257785): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2019-09-24 04:44:08 (1257785): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2019-09-24 04:44:08 (1257785): Guest Log: BIOS: Booting from Hard Disk...
2019-09-24 04:44:10 (1257785): Guest Log: BIOS: KBD: unsupported int 16h function 03
2019-09-24 04:44:10 (1257785): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2019-09-24 04:44:10 (1257785): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2019-09-24 04:44:10 (1257785): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2019-09-24 04:44:10 (1257785): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2019-09-24 04:44:10 (1257785): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2019-09-24 04:44:10 (1257785): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2019-09-24 04:44:10 (1257785): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2019-09-24 04:44:10 (1257785): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2019-09-24 04:44:10 (1257785): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2019-09-24 04:44:10 (1257785): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2019-09-24 04:44:10 (1257785): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2019-09-24 04:44:10 (1257785): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2019-09-24 04:44:10 (1257785): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2019-09-24 04:44:10 (1257785): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2019-09-24 04:44:10 (1257785): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2019-09-24 04:44:10 (1257785): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2019-09-24 04:44:10 (1257785): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2019-09-24 04:44:10 (1257785): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2019-09-24 04:44:10 (1257785): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2019-09-24 04:44:10 (1257785): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2019-09-24 04:44:10 (1257785): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2019-09-24 04:44:10 (1257785): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2019-09-24 04:44:10 (1257785): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2019-09-24 04:44:10 (1257785): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2019-09-24 04:44:10 (1257785): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2019-09-24 04:44:10 (1257785): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2019-09-24 04:44:10 (1257785): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2019-09-24 04:44:10 (1257785): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2019-09-24 04:44:10 (1257785): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2019-09-24 04:44:10 (1257785): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2019-09-24 04:44:10 (1257785): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2019-09-24 04:44:13 (1257785): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2019-09-24 04:44:13 (1257785): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2019-09-24 04:44:15 (1257785): Guest Log: Checking CVMFS...
2019-09-24 04:44:18 (1257785): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2019-09-24 04:44:18 (1257785): Guest Log: 00:00:00.000129 main     Log opened 2019-09-24T04:44:15.898445000Z
2019-09-24 04:44:18 (1257785): Guest Log: 00:00:00.000207 main     OS Product: Linux
2019-09-24 04:44:18 (1257785): Guest Log: 00:00:00.000238 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2019-09-24 04:44:18 (1257785): Guest Log: 00:00:00.000257 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2019-09-24 04:44:18 (1257785): Guest Log: 00:00:00.000275 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2019-09-24 04:44:18 (1257785): Guest Log: 00:00:00.000275 main     Process ID: 1816
2019-09-24 04:44:18 (1257785): Guest Log: 00:00:00.000276 main     Package type: LINUX_64BITS_GENERIC
2019-09-24 04:44:18 (1257785): Guest Log: 00:00:00.001155 main     5.2.32 r132073 started. Verbose level = 0
2019-09-24 04:44:18 (1257785): Guest Log: CVMFS is ok
2019-09-24 04:44:18 (1257785): Guest Log: Mounting shared directory
2019-09-24 04:44:19 (1257785): Guest Log: Copying input files
2019-09-24 04:44:21 (1257785): Guest Log: Copied input files into RunAtlas.
2019-09-24 04:44:21 (1257785): Guest Log: copied the webapp to /var/www
2019-09-24 04:44:21 (1257785): Guest Log: set up http_proxy http://pcoslo5:3128
2019-09-24 04:44:21 (1257785): Guest Log: Detected squid proxy http://pcoslo5:3128 - will set in /etc/cvmfs/default.local
2019-09-24 04:44:27 (1257785): Guest Log: 00:00:10.010999 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 148 998 000ns (GuestNow=1 569 293 067 752 135 000 ns GuestLast=1 569 300 255 901 133 000 ns fSetTimeLastLoop=true )
2019-09-24 04:46:25 (1257785): Guest Log: ATHENA_PROC_NUMBER=4
2019-09-24 04:46:25 (1257785): Guest Log:  *** Starting ATLAS job. (PandaID=4002876565 taskID=000649-2) ***
2019-09-24 04:58:54 (1257785): Guest Log:  *** Job finished ***
2019-09-24 04:58:54 (1257785): Guest Log:  *** The last 20 lines of the pilot log: ***
2019-09-24 04:58:54 (1257785): Guest Log: 2019-09-24 02:58:53 UTC [wrapper] apfmon messages muted
2019-09-24 04:58:54 (1257785): Guest Log: ---- find pandaID.out ----
2019-09-24 04:58:54 (1257785): Guest Log: total 56
2019-09-24 04:58:54 (1257785): Guest Log: -rw-------.  1 atlas atlas 11357 Jul 25 14:38 LICENSE
2019-09-24 04:58:54 (1257785): Guest Log: -rw-------.  1 atlas atlas    20 Sep  9 11:04 MANIFEST.IN
2019-09-24 04:58:54 (1257785): Guest Log: -rw-------.  1 atlas atlas    11 Sep 24 02:46 pandaIDs.out
2019-09-24 04:58:54 (1257785): Guest Log: drwx------. 14 atlas atlas   216 Sep 24 02:46 pilot
2019-09-24 04:58:54 (1257785): Guest Log: -rwx------.  1 atlas atlas 20136 Sep  9 11:04 pilot.py
2019-09-24 04:58:54 (1257785): Guest Log: -rw-------.  1 atlas atlas     9 Sep  9 11:04 PILOTVERSION
2019-09-24 04:58:54 (1257785): Guest Log: -rw-------.  1 atlas atlas  2251 Jul 25 14:38 README.md
2019-09-24 04:58:54 (1257785): Guest Log: -rw-------.  1 atlas atlas   760 Aug 22 09:01 setup.py
2019-09-24 04:58:54 (1257785): Guest Log: -rw-------.  1 atlas atlas   221 Jul 25 14:38 TODO.md
2019-09-24 04:58:54 (1257785): Guest Log: -rw-------. 1 atlas atlas 11 Sep 24 02:46 /home/atlas/RunAtlas/pilot2/pandaIDs.out
2019-09-24 04:58:54 (1257785): Guest Log: 4002876565
2019-09-24 04:58:54 (1257785): Guest Log: 2019-09-24 02:58:53 UTC [wrapper] Test setup, not cleaning
2019-09-24 04:58:54 (1257785): Guest Log: 2019-09-24 02:58:53 UTC [wrapper] ==== wrapper stdout END ====
2019-09-24 04:58:54 (1257785): Guest Log: 2019-09-24 02:58:53 UTC [wrapper] ==== wrapper stderr END ====
2019-09-24 04:58:54 (1257785): Guest Log: 2019-09-24 02:58:53 UTC [wrapper] wrapper wrapperexiting ec=0, duration=748
2019-09-24 04:58:54 (1257785): Guest Log: 2019-09-24 02:58:53 UTC [wrapper] apfmon messages muted
2019-09-24 04:58:54 (1257785): Guest Log:  *** Error codes and diagnostics ***
2019-09-24 04:58:54 (1257785): Guest Log:     "exeErrorCode": 0,
2019-09-24 04:58:54 (1257785): Guest Log:     "exeErrorDiag": "",
2019-09-24 04:58:54 (1257785): Guest Log:     "pilotErrorCode": 0,
2019-09-24 04:58:54 (1257785): Guest Log:     "pilotErrorDiag": "",
2019-09-24 04:58:54 (1257785): Guest Log:  *** Listing of results directory ***
2019-09-24 04:58:54 (1257785): Guest Log: total 22600
2019-09-24 04:58:54 (1257785): Guest Log: -rw-r--r--. 1 atlas atlas  259319 Sep 12 11:38 pilot2.tar.gz
2019-09-24 04:58:54 (1257785): Guest Log: -rwx------. 1 atlas atlas   12641 Sep 12 11:41 runpilot2-wrapper.sh
2019-09-24 04:58:54 (1257785): Guest Log: -rw-------. 1 atlas atlas    2948 Sep 12 11:41 pandaJobData.out
2019-09-24 04:58:54 (1257785): Guest Log: -rw-r--r--. 1 atlas atlas  266066 Sep 24 02:44 input.tar.gz
2019-09-24 04:58:54 (1257785): Guest Log: -rw-r--r--. 1 atlas atlas     815 Sep 24 02:44 RTE.tar.gz
2019-09-24 04:58:54 (1257785): Guest Log: -rw-r--r--. 1 atlas atlas    8465 Sep 24 02:44 start_atlas.sh
2019-09-24 04:58:54 (1257785): Guest Log: -rw-r--r--. 1 atlas atlas    6264 Sep 24 02:44 init_data.xml
2019-09-24 04:58:54 (1257785): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Sep 24 02:44 EVNT.14296418._001447.pool.root.1 -> /data/./ATLAS.root_0
2019-09-24 04:58:54 (1257785): Guest Log: drwxr-xr-x. 3 atlas atlas      17 Sep 24 02:46 APPS
2019-09-24 04:58:54 (1257785): Guest Log: -rw-------. 1 atlas atlas     240 Sep 24 02:46 setup.sh.local
2019-09-24 04:58:54 (1257785): Guest Log: -rw-------. 1 atlas atlas    5077 Sep 24 02:46 queuedata.json
2019-09-24 04:58:54 (1257785): Guest Log: -rw-------. 1 atlas atlas 4053283 Sep 24 02:46 agis_schedconf.cvmfs.json
2019-09-24 04:58:54 (1257785): Guest Log: -rw-------. 1 atlas atlas 7578835 Sep 24 02:46 agis_ddmendpoints.json
2019-09-24 04:58:54 (1257785): Guest Log: drwx------. 3 atlas atlas     229 Sep 24 02:46 pilot2
2019-09-24 04:58:54 (1257785): Guest Log: -rw-------. 1 atlas atlas 9091113 Sep 24 02:57 HITS.000649-2898049-4361._078090.pool.root.1
2019-09-24 04:58:54 (1257785): Guest Log: -rw-------. 1 atlas atlas     833 Sep 24 02:58 memory_monitor_summary.json
2019-09-24 04:58:54 (1257785): Guest Log: -rw-------. 1 atlas atlas  712398 Sep 24 02:58 log.000649-2898049-4361._078090.job.log.tgz.1
2019-09-24 04:58:54 (1257785): Guest Log: -rw-------. 1 atlas atlas   11001 Sep 24 02:58 heartbeat.json
2019-09-24 04:58:54 (1257785): Guest Log: -rw-------. 1 atlas atlas   10600 Sep 24 02:58 pilotlog.txt
2019-09-24 04:58:54 (1257785): Guest Log: -rw-------. 1 atlas atlas  163019 Sep 24 02:58 log.14568781._078090.job.log.1
2019-09-24 04:58:54 (1257785): Guest Log: -rw-------. 1 atlas atlas     504 Sep 24 02:58 C8aKDm8ecSvnShfckohDCDFpABFKDmABFKDmQ6FKDmkDFKDmpnV7cm.diag
2019-09-24 04:58:54 (1257785): Guest Log: -rw-r--r--. 1 atlas atlas    7769 Sep 24 02:58 runtime_log.err
2019-09-24 04:58:54 (1257785): Guest Log: -rw-------. 1 atlas atlas     496 Sep 24 02:58 output.list
2019-09-24 04:58:54 (1257785): Guest Log: -rw-r--r--. 1 atlas atlas     617 Sep 24 02:58 runtime_log
2019-09-24 04:58:54 (1257785): Guest Log: -rw-------. 1 atlas atlas  901120 Sep 24 02:58 result.tar.gz
2019-09-24 04:58:54 (1257785): Guest Log: Looking for outputfile HITS.000649-2898049-4361._078090.pool.root.1
2019-09-24 04:58:54 (1257785): Guest Log: HITS file was successfully produced
2019-09-24 04:58:54 (1257785): Guest Log: -rw-------. 1 atlas atlas 9091113 Sep 24 02:57 /home/atlas/RunAtlas/HITS.000649-2898049-4361._078090.pool.root.1
2019-09-24 04:58:54 (1257785): Guest Log: Successfully finished the ATLAS job!
2019-09-24 04:58:54 (1257785): Guest Log: Copying the results back to the shared directory!
2019-09-24 04:58:54 (1257785): Guest Log:  *** Contents of shared directory: ***
2019-09-24 04:58:54 (1257785): Guest Log: total 366736
2019-09-24 04:58:54 (1257785): Guest Log: -rw-r--r--. 1 root root 365251149 Sep 24 02:44 ATLAS.root_0
2019-09-24 04:58:54 (1257785): Guest Log: -rw-r--r--. 1 root root   9091113 Sep 24 02:57 HITS.pool.root.1
2019-09-24 04:58:54 (1257785): Guest Log: -rw-r--r--. 1 root root      6264 Sep 24 02:44 init_data.xml
2019-09-24 04:58:54 (1257785): Guest Log: -rw-r--r--. 1 root root    266066 Sep 24 02:44 input.tar.gz
2019-09-24 04:58:54 (1257785): Guest Log: -rw-r--r--. 1 root root    901120 Sep 24 02:58 result.tar.gz
2019-09-24 04:58:54 (1257785): Guest Log: -rw-r--r--. 1 root root       815 Sep 24 02:44 RTE.tar.gz
2019-09-24 04:58:54 (1257785): Guest Log: -rw-r--r--. 1 root root      8465 Sep 24 02:44 start_atlas.sh
2019-09-24 04:58:54 (1257785): Guest Log:  *** Success! Shutting down the machine. ***
2019-09-24 04:58:54 (1257785): VM Completion File Detected.
2019-09-24 04:58:54 (1257785): Powering off VM.
2019-09-24 04:58:54 (1257785): Successfully stopped VM.
2019-09-24 04:58:54 (1257785): Deregistering VM. (boinc_d474dfe171c4ead7, slot#0)
2019-09-24 04:58:54 (1257785): Removing network bandwidth throttle group from VM.
2019-09-24 04:58:54 (1257785): Removing storage controller(s) from VM.
2019-09-24 04:58:55 (1257785): Removing VM from VirtualBox.
2019-09-24 04:58:55 (1257785): Removing virtual disk drive from VirtualBox.
04:59:00 (1257785): called boinc_finish(0)

</stderr_txt>
]]>


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