Name bZGNDmt5MXvnShfckohDCDFpABFKDmABFKDmWUHQDmABFKDmBbsYcn_0
Workunit 1941447
Created 25 Sep 2019, 14:05:11 UTC
Sent 27 Sep 2019, 2:46:20 UTC
Report deadline 4 Oct 2019, 2:46:20 UTC
Received 28 Sep 2019, 0:32:30 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 3682
Run time 5 hours 30 min 59 sec
CPU time 21 hours 18 min 1 sec
Validate state Valid
Credit 819.46
Device peak FLOPS 17.83 GFLOPS
Application version ATLAS Simulation v0.84 (vbox64_mt_mcore_atlas)
x86_64-pc-linux-gnu
Peak working set size 119.82 MB
Peak swap size 8.62 GB
Peak disk usage 4.27 GB

Stderr output

<core_client_version>7.16.1</core_client_version>
<![CDATA[
<stderr_txt>
2019-09-27 21:01:22 (3050127): vboxwrapper (7.7.26197): starting
2019-09-27 21:01:22 (3050127): Feature: Checkpoint interval offset (368 seconds)
2019-09-27 21:01:22 (3050127): Detected: VirtualBox VboxManage Interface (Version: 6.0.12)
2019-09-27 21:01:22 (3050127): Detected: Minimum checkpoint interval (900.000000 seconds)
2019-09-27 21:01:22 (3050127): Successfully copied 'init_data.xml' to the shared directory.
2019-09-27 21:01:22 (3050127): Create VM. (boinc_2dffe8356eff5828, slot#0)
2019-09-27 21:01:22 (3050127): Setting Memory Size for VM. (6600MB)
2019-09-27 21:01:22 (3050127): Setting CPU Count for VM. (4)
2019-09-27 21:01:22 (3050127): Setting Chipset Options for VM.
2019-09-27 21:01:22 (3050127): Setting Boot Options for VM.
2019-09-27 21:01:22 (3050127): Setting Network Configuration for NAT.
2019-09-27 21:01:22 (3050127): Enabling VM Network Access.
2019-09-27 21:01:22 (3050127): Disabling USB Support for VM.
2019-09-27 21:01:22 (3050127): Disabling COM Port Support for VM.
2019-09-27 21:01:22 (3050127): Disabling LPT Port Support for VM.
2019-09-27 21:01:23 (3050127): Disabling Audio Support for VM.
2019-09-27 21:01:23 (3050127): Disabling Clipboard Support for VM.
2019-09-27 21:01:23 (3050127): Disabling Drag and Drop Support for VM.
2019-09-27 21:01:23 (3050127): Adding storage controller(s) to VM.
2019-09-27 21:01:23 (3050127): Adding virtual disk drive to VM. (vm_image.vdi)
2019-09-27 21:01:23 (3050127): Adding VirtualBox Guest Additions to VM.
2019-09-27 21:01:23 (3050127): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2019-09-27 21:01:23 (3050127): forwarding host port 42302 to guest port 80
2019-09-27 21:01:23 (3050127): Enabling remote desktop for VM.
2019-09-27 21:01:23 (3050127): Required extension pack not installed, remote desktop not enabled.
2019-09-27 21:01:23 (3050127): Enabling shared directory for VM.
2019-09-27 21:01:23 (3050127): Starting VM. (boinc_2dffe8356eff5828, slot#0)
2019-09-27 21:01:24 (3050127): Successfully started VM. (PID = '3050737')
2019-09-27 21:01:24 (3050127): Reporting VM Process ID to BOINC.
2019-09-27 21:01:24 (3050127): Guest Log: BIOS: VirtualBox 6.0.12
2019-09-27 21:01:24 (3050127): Guest Log: CPUID EDX: 0x178bfbff
2019-09-27 21:01:24 (3050127): Guest Log: BIOS: ata0-0: PCHS=16383/16/63 LCHS=1024/255/63
2019-09-27 21:01:24 (3050127): VM state change detected. (old = 'poweroff', new = 'running')
2019-09-27 21:01:24 (3050127): Detected: Web Application Enabled (http://localhost:42302)
2019-09-27 21:01:24 (3050127): Preference change detected
2019-09-27 21:01:24 (3050127): Setting CPU throttle for VM. (100%)
2019-09-27 21:01:25 (3050127): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2019-09-27 21:01:26 (3050127): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2019-09-27 21:01:26 (3050127): Guest Log: BIOS: Booting from Hard Disk...
2019-09-27 21:01:28 (3050127): Guest Log: BIOS: KBD: unsupported int 16h function 03
2019-09-27 21:01:28 (3050127): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2019-09-27 21:01:28 (3050127): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2019-09-27 21:01:28 (3050127): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2019-09-27 21:01:28 (3050127): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2019-09-27 21:01:28 (3050127): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2019-09-27 21:01:28 (3050127): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2019-09-27 21:01:28 (3050127): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2019-09-27 21:01:28 (3050127): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2019-09-27 21:01:28 (3050127): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2019-09-27 21:01:28 (3050127): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2019-09-27 21:01:28 (3050127): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2019-09-27 21:01:28 (3050127): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2019-09-27 21:01:28 (3050127): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2019-09-27 21:01:28 (3050127): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2019-09-27 21:01:28 (3050127): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2019-09-27 21:01:28 (3050127): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2019-09-27 21:01:28 (3050127): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2019-09-27 21:01:28 (3050127): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2019-09-27 21:01:28 (3050127): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2019-09-27 21:01:28 (3050127): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2019-09-27 21:01:28 (3050127): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2019-09-27 21:01:28 (3050127): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2019-09-27 21:01:28 (3050127): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2019-09-27 21:01:28 (3050127): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2019-09-27 21:01:28 (3050127): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2019-09-27 21:01:28 (3050127): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2019-09-27 21:01:28 (3050127): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2019-09-27 21:01:28 (3050127): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2019-09-27 21:01:28 (3050127): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2019-09-27 21:01:28 (3050127): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2019-09-27 21:01:28 (3050127): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2019-09-27 21:01:32 (3050127): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2019-09-27 21:01:32 (3050127): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2019-09-27 21:01:33 (3050127): Guest Log: Checking CVMFS...
2019-09-27 21:01:37 (3050127): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2019-09-27 21:01:37 (3050127): Guest Log: 00:00:00.000125 main     Log opened 2019-09-27T21:01:34.995836000Z
2019-09-27 21:01:37 (3050127): Guest Log: 00:00:00.000234 main     OS Product: Linux
2019-09-27 21:01:37 (3050127): Guest Log: 00:00:00.000266 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2019-09-27 21:01:37 (3050127): Guest Log: 00:00:00.000283 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2019-09-27 21:01:37 (3050127): Guest Log: 00:00:00.000300 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2019-09-27 21:01:37 (3050127): Guest Log: 00:00:00.000300 main     Process ID: 1814
2019-09-27 21:01:37 (3050127): Guest Log: 00:00:00.000301 main     Package type: LINUX_64BITS_GENERIC
2019-09-27 21:01:37 (3050127): Guest Log: 00:00:00.001395 main     5.2.32 r132073 started. Verbose level = 0
2019-09-27 21:01:37 (3050127): Guest Log: CVMFS is ok
2019-09-27 21:01:37 (3050127): Guest Log: Mounting shared directory
2019-09-27 21:01:37 (3050127): Guest Log: Copying input files
2019-09-27 21:01:38 (3050127): Guest Log: Copied input files into RunAtlas.
2019-09-27 21:01:38 (3050127): Guest Log: copied the webapp to /var/www
2019-09-27 21:01:38 (3050127): Guest Log: set up http_proxy http://pcoslo5:3128
2019-09-27 21:01:38 (3050127): Guest Log: Detected squid proxy http://pcoslo5:3128 - will set in /etc/cvmfs/default.local
2019-09-27 21:01:47 (3050127): Guest Log: 00:00:10.002772 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 187 753 063 000ns (GuestNow=1 569 610 907 245 184 000 ns GuestLast=1 569 618 094 998 247 000 ns fSetTimeLastLoop=true )
2019-09-27 21:03:43 (3050127): Guest Log: ATHENA_PROC_NUMBER=4
2019-09-27 21:03:43 (3050127): Guest Log:  *** Starting ATLAS job. (PandaID=4488868830 taskID=19056345) ***
2019-09-27 22:40:25 (3050127): Status Report: Elapsed Time: '6000.000000'
2019-09-27 22:40:25 (3050127): Status Report: CPU Time: '22702.990000'
2019-09-28 00:19:25 (3050127): Status Report: Elapsed Time: '12000.000000'
2019-09-28 00:19:25 (3050127): Status Report: CPU Time: '46453.350000'
2019-09-28 01:58:26 (3050127): Status Report: Elapsed Time: '18000.000000'
2019-09-28 01:58:26 (3050127): Status Report: CPU Time: '70203.250000'
2019-09-28 02:32:12 (3050127): Guest Log:  *** Job finished ***
2019-09-28 02:32:12 (3050127): Guest Log:  *** The last 20 lines of the pilot log: ***
2019-09-28 02:32:12 (3050127): Guest Log: -rw-------.  1 atlas atlas 11357 Jul 25 14:38 LICENSE
2019-09-28 02:32:12 (3050127): Guest Log: -rw-------.  1 atlas atlas    20 Sep  9 11:04 MANIFEST.IN
2019-09-28 02:32:12 (3050127): Guest Log: -rw-------.  1 atlas atlas    11 Sep 27 19:03 pandaIDs.out
2019-09-28 02:32:12 (3050127): Guest Log: drwx------. 14 atlas atlas   216 Sep 27 19:03 pilot
2019-09-28 02:32:12 (3050127): Guest Log: -rwx------.  1 atlas atlas 20136 Sep  9 11:04 pilot.py
2019-09-28 02:32:12 (3050127): Guest Log: -rw-------.  1 atlas atlas     9 Sep  9 11:04 PILOTVERSION
2019-09-28 02:32:12 (3050127): Guest Log: -rw-------.  1 atlas atlas  2251 Jul 25 14:38 README.md
2019-09-28 02:32:12 (3050127): Guest Log: -rw-------.  1 atlas atlas   760 Aug 22 09:01 setup.py
2019-09-28 02:32:12 (3050127): Guest Log: -rw-------.  1 atlas atlas   221 Jul 25 14:38 TODO.md
2019-09-28 02:32:12 (3050127): Guest Log: 2019-09-28 00:32:11 UTC [wrapper] pandaIDs.out files:
2019-09-28 02:32:12 (3050127): Guest Log: -rw-------. 1 atlas atlas 11 Sep 27 19:03 /home/atlas/RunAtlas/pilot2/pandaIDs.out
2019-09-28 02:32:12 (3050127): Guest Log: 2019-09-28 00:32:11 UTC [wrapper] pandaIDs.out content:
2019-09-28 02:32:12 (3050127): Guest Log: 4488868830
2019-09-28 02:32:12 (3050127): Guest Log: 2019-09-28 00:32:11 UTC [wrapper] Test setup, not cleaning
2019-09-28 02:32:12 (3050127): Guest Log: 2019-09-28 00:32:11 UTC [wrapper] ==== wrapper stdout END ====
2019-09-28 02:32:12 (3050127): Guest Log: 2019-09-28 00:32:11 UTC [wrapper] ==== wrapper stderr END ====
2019-09-28 02:32:12 (3050127): Guest Log: 2019-09-28 00:32:11 UTC [wrapper] wrapper wrapperexiting ec=0, duration=19708
2019-09-28 02:32:12 (3050127): Guest Log: 2019-09-28 00:32:11 UTC [wrapper] apfmon messages muted
2019-09-28 02:32:12 (3050127): Guest Log:  *** Error codes and diagnostics ***
2019-09-28 02:32:12 (3050127): Guest Log:     "exeErrorCode": 0,
2019-09-28 02:32:12 (3050127): Guest Log:     "exeErrorDiag": "",
2019-09-28 02:32:12 (3050127): Guest Log:     "pilotErrorCode": 0,
2019-09-28 02:32:12 (3050127): Guest Log:     "pilotErrorDiag": "",
2019-09-28 02:32:12 (3050127): Guest Log:  *** Listing of results directory ***
2019-09-28 02:32:12 (3050127): Guest Log: total 265956
2019-09-28 02:32:12 (3050127): Guest Log: -rw-r--r--. 1 atlas atlas    259319 Sep 25 13:50 pilot2.tar.gz
2019-09-28 02:32:12 (3050127): Guest Log: -rwx------. 1 atlas atlas     12762 Sep 25 14:05 runpilot2-wrapper.sh
2019-09-28 02:32:12 (3050127): Guest Log: -rw-r--r--. 1 atlas atlas      4480 Sep 25 14:05 queuedata.json
2019-09-28 02:32:12 (3050127): Guest Log: -rw-------. 1 atlas atlas      2865 Sep 25 14:05 pandaJobData.out
2019-09-28 02:32:12 (3050127): Guest Log: -rw-r--r--. 1 atlas atlas    267500 Sep 27 19:01 input.tar.gz
2019-09-28 02:32:12 (3050127): Guest Log: -rw-r--r--. 1 atlas atlas       815 Sep 27 19:01 RTE.tar.gz
2019-09-28 02:32:12 (3050127): Guest Log: -rw-r--r--. 1 atlas atlas      8659 Sep 27 19:01 start_atlas.sh
2019-09-28 02:32:12 (3050127): Guest Log: -rw-r--r--. 1 atlas atlas      6263 Sep 27 19:01 init_data.xml
2019-09-28 02:32:12 (3050127): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Sep 27 19:01 EVNT.18605806._000062.pool.root.1 -> /data/./ATLAS.root_0
2019-09-28 02:32:12 (3050127): Guest Log: drwxr-xr-x. 3 atlas atlas        17 Sep 27 19:03 APPS
2019-09-28 02:32:12 (3050127): Guest Log: -rw-------. 1 atlas atlas       240 Sep 27 19:03 setup.sh.local
2019-09-28 02:32:12 (3050127): Guest Log: -rw-------. 1 atlas atlas   4027851 Sep 27 19:03 agis_schedconf.cvmfs.json
2019-09-28 02:32:12 (3050127): Guest Log: -rw-------. 1 atlas atlas   7579780 Sep 27 19:03 agis_ddmendpoints.json
2019-09-28 02:32:12 (3050127): Guest Log: drwx------. 3 atlas atlas       229 Sep 27 19:03 pilot2
2019-09-28 02:32:12 (3050127): Guest Log: -rw-------. 1 atlas atlas 256191153 Sep 28 00:30 HITS.19056345._002997.pool.root.1
2019-09-28 02:32:12 (3050127): Guest Log: -rw-------. 1 atlas atlas       788 Sep 28 00:31 memory_monitor_summary.json
2019-09-28 02:32:12 (3050127): Guest Log: -rw-------. 1 atlas atlas    866295 Sep 28 00:31 log.19056345._002997.job.log.tgz.1
2019-09-28 02:32:12 (3050127): Guest Log: -rw-------. 1 atlas atlas     64130 Sep 28 00:31 heartbeat.json
2019-09-28 02:32:12 (3050127): Guest Log: -rw-------. 1 atlas atlas     11385 Sep 28 00:32 pilotlog.txt
2019-09-28 02:32:12 (3050127): Guest Log: -rw-------. 1 atlas atlas   1015036 Sep 28 00:32 log.19056345._002997.job.log.1
2019-09-28 02:32:12 (3050127): Guest Log: -rw-------. 1 atlas atlas       515 Sep 28 00:32 bZGNDmt5MXvnShfckohDCDFpABFKDmABFKDmWUHQDmABFKDmBbsYcn.diag
2019-09-28 02:32:12 (3050127): Guest Log: -rw-r--r--. 1 atlas atlas      7721 Sep 28 00:32 runtime_log.err
2019-09-28 02:32:12 (3050127): Guest Log: -rw-------. 1 atlas atlas       463 Sep 28 00:32 output.list
2019-09-28 02:32:12 (3050127): Guest Log: -rw-r--r--. 1 atlas atlas       692 Sep 28 00:32 runtime_log
2019-09-28 02:32:12 (3050127): Guest Log: -rw-------. 1 atlas atlas   1955840 Sep 28 00:32 result.tar.gz
2019-09-28 02:32:12 (3050127): Guest Log: Looking for outputfile HITS.19056345._002997.pool.root.1
2019-09-28 02:32:12 (3050127): Guest Log: HITS file was successfully produced
2019-09-28 02:32:12 (3050127): Guest Log: -rw-------. 1 atlas atlas 256191153 Sep 28 00:30 /home/atlas/RunAtlas/HITS.19056345._002997.pool.root.1
2019-09-28 02:32:13 (3050127): Guest Log: Successfully finished the ATLAS job!
2019-09-28 02:32:13 (3050127): Guest Log: Copying the results back to the shared directory!
2019-09-28 02:32:13 (3050127): Guest Log:  *** Contents of shared directory: ***
2019-09-28 02:32:13 (3050127): Guest Log: total 471476
2019-09-28 02:32:13 (3050127): Guest Log: -rw-r--r--. 1 root root 224345854 Sep 27 19:01 ATLAS.root_0
2019-09-28 02:32:13 (3050127): Guest Log: -rw-r--r--. 1 root root 256191153 Sep 28 00:30 HITS.pool.root.1
2019-09-28 02:32:13 (3050127): Guest Log: -rw-r--r--. 1 root root      6263 Sep 27 19:01 init_data.xml
2019-09-28 02:32:13 (3050127): Guest Log: -rw-r--r--. 1 root root    267500 Sep 27 19:01 input.tar.gz
2019-09-28 02:32:13 (3050127): Guest Log: -rw-r--r--. 1 root root   1955840 Sep 28 00:32 result.tar.gz
2019-09-28 02:32:13 (3050127): Guest Log: -rw-r--r--. 1 root root       815 Sep 27 19:01 RTE.tar.gz
2019-09-28 02:32:13 (3050127): Guest Log: -rw-r--r--. 1 root root      8659 Sep 27 19:01 start_atlas.sh
2019-09-28 02:32:13 (3050127): Guest Log:  *** Success! Shutting down the machine. ***
2019-09-28 02:32:13 (3050127): VM Completion File Detected.
2019-09-28 02:32:13 (3050127): Powering off VM.
2019-09-28 02:32:13 (3050127): Successfully stopped VM.
2019-09-28 02:32:13 (3050127): Deregistering VM. (boinc_2dffe8356eff5828, slot#0)
2019-09-28 02:32:13 (3050127): Removing network bandwidth throttle group from VM.
2019-09-28 02:32:13 (3050127): Removing storage controller(s) from VM.
2019-09-28 02:32:13 (3050127): Removing VM from VirtualBox.
2019-09-28 02:32:13 (3050127): Removing virtual disk drive from VirtualBox.
02:32:19 (3050127): called boinc_finish(0)

</stderr_txt>
]]>


©2024 CERN