Task 2827900

Name	G1PMDmKXiVvnShfckohDCDFpABFKDmABFKDmlgdNDmABFKDmNCcGNn_4
Workunit	1940076
Created	1 Oct 2019, 5:27:14 UTC
Sent	1 Oct 2019, 14:59:29 UTC
Report deadline	8 Oct 2019, 14:59:29 UTC
Received	2 Oct 2019, 17:03:38 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	3682
Run time	7 hours 47 min 20 sec
CPU time	1 days 6 hours 24 min 58 sec
Validate state	Valid
Credit	1,554.41
Device peak FLOPS	17.83 GFLOPS
Application version	ATLAS Simulation v0.84 (vbox64_mt_mcore_atlas) x86_64-pc-linux-gnu
Peak working set size	149.18 MB
Peak swap size	8.69 GB
Peak disk usage	4.20 GB
Stderr output

<core_client_version>7.16.1</core_client_version>
<![CDATA[
<stderr_txt>
2019-10-02 11:11:05 (547634): vboxwrapper (7.7.26197): starting
2019-10-02 11:11:05 (547634): Feature: Checkpoint interval offset (237 seconds)
2019-10-02 11:11:05 (547634): Detected: VirtualBox VboxManage Interface (Version: 6.0.12)
2019-10-02 11:11:06 (547634): Detected: Minimum checkpoint interval (900.000000 seconds)
2019-10-02 11:11:06 (547634): Successfully copied 'init_data.xml' to the shared directory.
2019-10-02 11:11:06 (547634): Create VM. (boinc_85380afa6db47268, slot#0)
2019-10-02 11:11:06 (547634): Setting Memory Size for VM. (6600MB)
2019-10-02 11:11:06 (547634): Setting CPU Count for VM. (4)
2019-10-02 11:11:06 (547634): Setting Chipset Options for VM.
2019-10-02 11:11:06 (547634): Setting Boot Options for VM.
2019-10-02 11:11:06 (547634): Setting Network Configuration for NAT.
2019-10-02 11:11:06 (547634): Enabling VM Network Access.
2019-10-02 11:11:06 (547634): Disabling USB Support for VM.
2019-10-02 11:11:06 (547634): Disabling COM Port Support for VM.
2019-10-02 11:11:06 (547634): Disabling LPT Port Support for VM.
2019-10-02 11:11:06 (547634): Disabling Audio Support for VM.
2019-10-02 11:11:06 (547634): Disabling Clipboard Support for VM.
2019-10-02 11:11:06 (547634): Disabling Drag and Drop Support for VM.
2019-10-02 11:11:06 (547634): Adding storage controller(s) to VM.
2019-10-02 11:11:07 (547634): Adding virtual disk drive to VM. (vm_image.vdi)
2019-10-02 11:11:07 (547634): Adding VirtualBox Guest Additions to VM.
2019-10-02 11:11:07 (547634): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2019-10-02 11:11:07 (547634): forwarding host port 59657 to guest port 80
2019-10-02 11:11:07 (547634): Enabling remote desktop for VM.
2019-10-02 11:11:07 (547634): Required extension pack not installed, remote desktop not enabled.
2019-10-02 11:11:07 (547634): Enabling shared directory for VM.
2019-10-02 11:11:07 (547634): Starting VM. (boinc_85380afa6db47268, slot#0)
2019-10-02 11:11:08 (547634): Successfully started VM. (PID = '548087')
2019-10-02 11:11:08 (547634): Reporting VM Process ID to BOINC.
2019-10-02 11:11:08 (547634): Guest Log: BIOS: VirtualBox 6.0.12
2019-10-02 11:11:08 (547634): Guest Log: CPUID EDX: 0x178bfbff
2019-10-02 11:11:08 (547634): Guest Log: BIOS: ata0-0: PCHS=16383/16/63 LCHS=1024/255/63
2019-10-02 11:11:08 (547634): VM state change detected. (old = 'poweroff', new = 'running')
2019-10-02 11:11:08 (547634): Detected: Web Application Enabled (http://localhost:59657)
2019-10-02 11:11:08 (547634): Preference change detected
2019-10-02 11:11:08 (547634): Setting CPU throttle for VM. (100%)
2019-10-02 11:11:08 (547634): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2019-10-02 11:11:10 (547634): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2019-10-02 11:11:10 (547634): Guest Log: BIOS: Booting from Hard Disk...
2019-10-02 11:11:12 (547634): Guest Log: BIOS: KBD: unsupported int 16h function 03
2019-10-02 11:11:12 (547634): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2019-10-02 11:11:12 (547634): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2019-10-02 11:11:12 (547634): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2019-10-02 11:11:12 (547634): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2019-10-02 11:11:12 (547634): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2019-10-02 11:11:12 (547634): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2019-10-02 11:11:12 (547634): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2019-10-02 11:11:12 (547634): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2019-10-02 11:11:12 (547634): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2019-10-02 11:11:12 (547634): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2019-10-02 11:11:12 (547634): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2019-10-02 11:11:12 (547634): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2019-10-02 11:11:12 (547634): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2019-10-02 11:11:12 (547634): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2019-10-02 11:11:12 (547634): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2019-10-02 11:11:12 (547634): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2019-10-02 11:11:12 (547634): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2019-10-02 11:11:12 (547634): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2019-10-02 11:11:12 (547634): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2019-10-02 11:11:12 (547634): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2019-10-02 11:11:12 (547634): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2019-10-02 11:11:12 (547634): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2019-10-02 11:11:12 (547634): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2019-10-02 11:11:12 (547634): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2019-10-02 11:11:12 (547634): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2019-10-02 11:11:12 (547634): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2019-10-02 11:11:12 (547634): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2019-10-02 11:11:12 (547634): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2019-10-02 11:11:12 (547634): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2019-10-02 11:11:12 (547634): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2019-10-02 11:11:12 (547634): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2019-10-02 11:11:15 (547634): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2019-10-02 11:11:15 (547634): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2019-10-02 11:11:17 (547634): Guest Log: Checking CVMFS...
2019-10-02 11:11:20 (547634): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2019-10-02 11:11:20 (547634): Guest Log: 00:00:00.000135 main     Log opened 2019-10-02T11:11:18.767726000Z
2019-10-02 11:11:20 (547634): Guest Log: 00:00:00.000218 main     OS Product: Linux
2019-10-02 11:11:20 (547634): Guest Log: 00:00:00.000240 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2019-10-02 11:11:20 (547634): Guest Log: 00:00:00.000257 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2019-10-02 11:11:20 (547634): Guest Log: 00:00:00.000272 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2019-10-02 11:11:20 (547634): Guest Log: 00:00:00.000273 main     Process ID: 1819
2019-10-02 11:11:20 (547634): Guest Log: 00:00:00.000273 main     Package type: LINUX_64BITS_GENERIC
2019-10-02 11:11:20 (547634): Guest Log: 00:00:00.001075 main     5.2.32 r132073 started. Verbose level = 0
2019-10-02 11:11:20 (547634): Guest Log: CVMFS is ok
2019-10-02 11:11:20 (547634): Guest Log: Mounting shared directory
2019-10-02 11:11:20 (547634): Guest Log: Copying input files
2019-10-02 11:11:21 (547634): Guest Log: Copied input files into RunAtlas.
2019-10-02 11:11:21 (547634): Guest Log: copied the webapp to /var/www
2019-10-02 11:11:21 (547634): Guest Log: set up http_proxy http://pcoslo5:3128
2019-10-02 11:11:21 (547634): Guest Log: Detected squid proxy http://pcoslo5:3128 - will set in /etc/cvmfs/default.local
2019-10-02 11:11:30 (547634): Guest Log: 00:00:10.003479 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 428 072 000ns (GuestNow=1 570 007 490 342 478 000 ns GuestLast=1 570 014 678 770 550 000 ns fSetTimeLastLoop=true )
2019-10-02 11:13:25 (547634): Guest Log: ATHENA_PROC_NUMBER=4
2019-10-02 11:13:25 (547634): Guest Log:  *** Starting ATLAS job. (PandaID=4484802452 taskID=19000575) ***
2019-10-02 12:50:09 (547634): Status Report: Elapsed Time: '6000.000000'
2019-10-02 12:50:09 (547634): Status Report: CPU Time: '22603.160000'
2019-10-02 14:29:10 (547634): Status Report: Elapsed Time: '12000.000000'
2019-10-02 14:29:10 (547634): Status Report: CPU Time: '46259.640000'
2019-10-02 16:08:11 (547634): Status Report: Elapsed Time: '18000.000000'
2019-10-02 16:08:11 (547634): Status Report: CPU Time: '69915.140000'
2019-10-02 17:47:12 (547634): Status Report: Elapsed Time: '24000.000000'
2019-10-02 17:47:12 (547634): Status Report: CPU Time: '93572.930000'
2019-10-02 18:58:17 (547634): Guest Log:  *** Job finished ***
2019-10-02 18:58:17 (547634): Guest Log:  *** The last 20 lines of the pilot log: ***
2019-10-02 18:58:17 (547634): Guest Log: -rw-------.  1 atlas atlas 11357 Jul 25 14:38 LICENSE
2019-10-02 18:58:17 (547634): Guest Log: -rw-------.  1 atlas atlas    20 Sep  9 11:04 MANIFEST.IN
2019-10-02 18:58:17 (547634): Guest Log: -rw-------.  1 atlas atlas    11 Oct  2 09:13 pandaIDs.out
2019-10-02 18:58:17 (547634): Guest Log: drwx------. 14 atlas atlas   216 Oct  2 09:13 pilot
2019-10-02 18:58:17 (547634): Guest Log: -rwx------.  1 atlas atlas 20136 Sep  9 11:04 pilot.py
2019-10-02 18:58:17 (547634): Guest Log: -rw-------.  1 atlas atlas     9 Sep  9 11:04 PILOTVERSION
2019-10-02 18:58:17 (547634): Guest Log: -rw-------.  1 atlas atlas  2251 Jul 25 14:38 README.md
2019-10-02 18:58:17 (547634): Guest Log: -rw-------.  1 atlas atlas   760 Aug 22 09:01 setup.py
2019-10-02 18:58:17 (547634): Guest Log: -rw-------.  1 atlas atlas   221 Jul 25 14:38 TODO.md
2019-10-02 18:58:17 (547634): Guest Log: 2019-10-02 16:58:16 UTC [wrapper] pandaIDs.out files:
2019-10-02 18:58:17 (547634): Guest Log: -rw-------. 1 atlas atlas 11 Oct  2 09:13 /home/atlas/RunAtlas/pilot2/pandaIDs.out
2019-10-02 18:58:17 (547634): Guest Log: 2019-10-02 16:58:16 UTC [wrapper] pandaIDs.out content:
2019-10-02 18:58:17 (547634): Guest Log: 4484802452
2019-10-02 18:58:17 (547634): Guest Log: 2019-10-02 16:58:16 UTC [wrapper] Test setup, not cleaning
2019-10-02 18:58:17 (547634): Guest Log: 2019-10-02 16:58:16 UTC [wrapper] ==== wrapper stdout END ====
2019-10-02 18:58:17 (547634): Guest Log: 2019-10-02 16:58:16 UTC [wrapper] ==== wrapper stderr END ====
2019-10-02 18:58:17 (547634): Guest Log: 2019-10-02 16:58:16 UTC [wrapper] wrapper wrapperexiting ec=0, duration=27891
2019-10-02 18:58:17 (547634): Guest Log: 2019-10-02 16:58:16 UTC [wrapper] apfmon messages muted
2019-10-02 18:58:17 (547634): Guest Log:  *** Error codes and diagnostics ***
2019-10-02 18:58:17 (547634): Guest Log:     "exeErrorCode": 0,
2019-10-02 18:58:17 (547634): Guest Log:     "exeErrorDiag": "",
2019-10-02 18:58:17 (547634): Guest Log:     "pilotErrorCode": 0,
2019-10-02 18:58:17 (547634): Guest Log:     "pilotErrorDiag": "",
2019-10-02 18:58:17 (547634): Guest Log:  *** Listing of results directory ***
2019-10-02 18:58:17 (547634): Guest Log: total 257124
2019-10-02 18:58:17 (547634): Guest Log: -rw-r--r--. 1 atlas atlas      4480 Sep 21 00:30 queuedata.json
2019-10-02 18:58:17 (547634): Guest Log: -rw-r--r--. 1 atlas atlas    259319 Sep 21 00:30 pilot2.tar.gz
2019-10-02 18:58:17 (547634): Guest Log: -rwx------. 1 atlas atlas     12762 Sep 21 00:34 runpilot2-wrapper.sh
2019-10-02 18:58:17 (547634): Guest Log: -rw-------. 1 atlas atlas      2886 Sep 21 00:34 pandaJobData.out
2019-10-02 18:58:17 (547634): Guest Log: -rw-r--r--. 1 atlas atlas    267507 Oct  2 09:11 input.tar.gz
2019-10-02 18:58:17 (547634): Guest Log: -rw-r--r--. 1 atlas atlas       815 Oct  2 09:11 RTE.tar.gz
2019-10-02 18:58:17 (547634): Guest Log: -rw-r--r--. 1 atlas atlas      8659 Oct  2 09:11 start_atlas.sh
2019-10-02 18:58:17 (547634): Guest Log: -rw-r--r--. 1 atlas atlas      6264 Oct  2 09:11 init_data.xml
2019-10-02 18:58:17 (547634): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct  2 09:11 EVNT.18605585._000220.pool.root.1 -> /data/./ATLAS.root_0
2019-10-02 18:58:17 (547634): Guest Log: drwxr-xr-x. 3 atlas atlas        17 Oct  2 09:13 APPS
2019-10-02 18:58:17 (547634): Guest Log: -rw-------. 1 atlas atlas       240 Oct  2 09:13 setup.sh.local
2019-10-02 18:58:17 (547634): Guest Log: -rw-------. 1 atlas atlas   3955733 Oct  2 09:13 agis_schedconf.cvmfs.json
2019-10-02 18:58:17 (547634): Guest Log: -rw-------. 1 atlas atlas   7579848 Oct  2 09:13 agis_ddmendpoints.json
2019-10-02 18:58:17 (547634): Guest Log: drwx------. 3 atlas atlas       229 Oct  2 09:13 pilot2
2019-10-02 18:58:17 (547634): Guest Log: -rw-------. 1 atlas atlas 246358284 Oct  2 16:57 HITS.19000575._010818.pool.root.1
2019-10-02 18:58:17 (547634): Guest Log: -rw-------. 1 atlas atlas       790 Oct  2 16:58 memory_monitor_summary.json
2019-10-02 18:58:17 (547634): Guest Log: -rw-------. 1 atlas atlas    913756 Oct  2 16:58 log.19000575._010818.job.log.tgz.1
2019-10-02 18:58:17 (547634): Guest Log: -rw-------. 1 atlas atlas     68400 Oct  2 16:58 heartbeat.json
2019-10-02 18:58:17 (547634): Guest Log: -rw-------. 1 atlas atlas     10984 Oct  2 16:58 pilotlog.txt
2019-10-02 18:58:17 (547634): Guest Log: -rw-------. 1 atlas atlas   1390809 Oct  2 16:58 log.19000575._010818.job.log.1
2019-10-02 18:58:17 (547634): Guest Log: -rw-------. 1 atlas atlas       516 Oct  2 16:58 G1PMDmKXiVvnShfckohDCDFpABFKDmABFKDmlgdNDmABFKDmNCcGNn.diag
2019-10-02 18:58:17 (547634): Guest Log: -rw-r--r--. 1 atlas atlas      7721 Oct  2 16:58 runtime_log.err
2019-10-02 18:58:17 (547634): Guest Log: -rw-------. 1 atlas atlas       463 Oct  2 16:58 output.list
2019-10-02 18:58:17 (547634): Guest Log: -rw-r--r--. 1 atlas atlas       692 Oct  2 16:58 runtime_log
2019-10-02 18:58:17 (547634): Guest Log: -rw-------. 1 atlas atlas   2385920 Oct  2 16:58 result.tar.gz
2019-10-02 18:58:17 (547634): Guest Log: Looking for outputfile HITS.19000575._010818.pool.root.1
2019-10-02 18:58:17 (547634): Guest Log: HITS file was successfully produced
2019-10-02 18:58:17 (547634): Guest Log: -rw-------. 1 atlas atlas 246358284 Oct  2 16:57 /home/atlas/RunAtlas/HITS.19000575._010818.pool.root.1
2019-10-02 18:58:17 (547634): Guest Log: Successfully finished the ATLAS job!
2019-10-02 18:58:17 (547634): Guest Log: Copying the results back to the shared directory!
2019-10-02 18:58:17 (547634): Guest Log:  *** Contents of shared directory: ***
2019-10-02 18:58:17 (547634): Guest Log: total 448396
2019-10-02 18:58:17 (547634): Guest Log: -rw-r--r--. 1 root root 210111513 Oct  2 09:11 ATLAS.root_0
2019-10-02 18:58:17 (547634): Guest Log: -rw-r--r--. 1 root root 246358284 Oct  2 16:57 HITS.pool.root.1
2019-10-02 18:58:17 (547634): Guest Log: -rw-r--r--. 1 root root      6264 Oct  2 09:11 init_data.xml
2019-10-02 18:58:17 (547634): Guest Log: -rw-r--r--. 1 root root    267507 Oct  2 09:11 input.tar.gz
2019-10-02 18:58:17 (547634): Guest Log: -rw-r--r--. 1 root root   2385920 Oct  2 16:58 result.tar.gz
2019-10-02 18:58:17 (547634): Guest Log: -rw-r--r--. 1 root root       815 Oct  2 09:11 RTE.tar.gz
2019-10-02 18:58:17 (547634): Guest Log: -rw-r--r--. 1 root root      8659 Oct  2 09:11 start_atlas.sh
2019-10-02 18:58:17 (547634): Guest Log:  *** Success! Shutting down the machine. ***
2019-10-02 18:58:17 (547634): VM Completion File Detected.
2019-10-02 18:58:17 (547634): Powering off VM.
2019-10-02 18:58:18 (547634): Successfully stopped VM.
2019-10-02 18:58:18 (547634): Deregistering VM. (boinc_85380afa6db47268, slot#0)
2019-10-02 18:58:18 (547634): Removing network bandwidth throttle group from VM.
2019-10-02 18:58:18 (547634): Removing storage controller(s) from VM.
2019-10-02 18:58:18 (547634): Removing VM from VirtualBox.
2019-10-02 18:58:18 (547634): Removing virtual disk drive from VirtualBox.
18:58:24 (547634): called boinc_finish(0)

</stderr_txt>
]]>
Development for LHC@home

Stderr output
