Name BAxLDmY5ubvnShfckohDCDFpABFKDmABFKDm0ShXDmABFKDmzegtLm_1
Workunit 1943748
Created 8 Oct 2019, 8:57:19 UTC
Sent 8 Oct 2019, 12:23:07 UTC
Report deadline 15 Oct 2019, 12:23:07 UTC
Received 9 Oct 2019, 1:11:05 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 3682
Run time 6 hours 36 min 1 sec
CPU time 1 days 1 hours 36 min 8 sec
Validate state Valid
Credit 980.45
Device peak FLOPS 17.83 GFLOPS
Application version ATLAS Simulation v0.87 (vbox64_mt_mcore_atlas)
x86_64-pc-linux-gnu
Peak working set size 2.01 GB
Peak swap size 8.73 GB
Peak disk usage 4.04 GB

Stderr output

<core_client_version>7.16.1</core_client_version>
<![CDATA[
<stderr_txt>
2019-10-08 20:34:56 (1127440): vboxwrapper (7.7.26197): starting
2019-10-08 20:34:56 (1127440): Feature: Checkpoint interval offset (59 seconds)
2019-10-08 20:34:56 (1127440): Detected: VirtualBox VboxManage Interface (Version: 5.2.32)
2019-10-08 20:34:56 (1127440): Detected: Minimum checkpoint interval (900.000000 seconds)
2019-10-08 20:34:56 (1127440): Successfully copied 'init_data.xml' to the shared directory.
2019-10-08 20:34:57 (1127440): Create VM. (boinc_c54d12b27056ed22, slot#0)
2019-10-08 20:34:57 (1127440): Setting Memory Size for VM. (6600MB)
2019-10-08 20:34:57 (1127440): Setting CPU Count for VM. (4)
2019-10-08 20:34:57 (1127440): Setting Chipset Options for VM.
2019-10-08 20:34:57 (1127440): Setting Boot Options for VM.
2019-10-08 20:34:57 (1127440): Setting Network Configuration for NAT.
2019-10-08 20:34:57 (1127440): Enabling VM Network Access.
2019-10-08 20:34:57 (1127440): Disabling USB Support for VM.
2019-10-08 20:34:57 (1127440): Disabling COM Port Support for VM.
2019-10-08 20:34:57 (1127440): Disabling LPT Port Support for VM.
2019-10-08 20:34:57 (1127440): Disabling Audio Support for VM.
2019-10-08 20:34:57 (1127440): Disabling Clipboard Support for VM.
2019-10-08 20:34:57 (1127440): Disabling Drag and Drop Support for VM.
2019-10-08 20:34:57 (1127440): Adding storage controller(s) to VM.
2019-10-08 20:34:57 (1127440): Adding virtual disk drive to VM. (vm_image.vdi)
2019-10-08 20:34:58 (1127440): Adding VirtualBox Guest Additions to VM.
2019-10-08 20:34:58 (1127440): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2019-10-08 20:34:58 (1127440): forwarding host port 11797 to guest port 80
2019-10-08 20:34:58 (1127440): Enabling remote desktop for VM.
2019-10-08 20:34:58 (1127440): Enabling shared directory for VM.
2019-10-08 20:34:58 (1127440): Starting VM. (boinc_c54d12b27056ed22, slot#0)
2019-10-08 20:34:59 (1127440): Successfully started VM. (PID = '1127906')
2019-10-08 20:34:59 (1127440): Reporting VM Process ID to BOINC.
2019-10-08 20:34:59 (1127440): Guest Log: BIOS: VirtualBox 5.2.32
2019-10-08 20:34:59 (1127440): Guest Log: CPUID EDX: 0x178bfbff
2019-10-08 20:34:59 (1127440): Guest Log: BIOS: ata0-0: PCHS=16383/16/63 LCHS=1024/255/63
2019-10-08 20:34:59 (1127440): VM state change detected. (old = 'poweroff', new = 'running')
2019-10-08 20:34:59 (1127440): Detected: Web Application Enabled (http://localhost:11797)
2019-10-08 20:34:59 (1127440): Detected: Remote Desktop Enabled (localhost:40532)
2019-10-08 20:34:59 (1127440): Preference change detected
2019-10-08 20:34:59 (1127440): Setting CPU throttle for VM. (100%)
2019-10-08 20:34:59 (1127440): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2019-10-08 20:35:01 (1127440): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2019-10-08 20:35:01 (1127440): Guest Log: BIOS: Booting from Hard Disk...
2019-10-08 20:35:03 (1127440): Guest Log: BIOS: KBD: unsupported int 16h function 03
2019-10-08 20:35:03 (1127440): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2019-10-08 20:35:03 (1127440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2019-10-08 20:35:03 (1127440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2019-10-08 20:35:03 (1127440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2019-10-08 20:35:03 (1127440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2019-10-08 20:35:03 (1127440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2019-10-08 20:35:03 (1127440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2019-10-08 20:35:03 (1127440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2019-10-08 20:35:03 (1127440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2019-10-08 20:35:03 (1127440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2019-10-08 20:35:03 (1127440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2019-10-08 20:35:03 (1127440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2019-10-08 20:35:03 (1127440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2019-10-08 20:35:03 (1127440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2019-10-08 20:35:03 (1127440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2019-10-08 20:35:03 (1127440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2019-10-08 20:35:03 (1127440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2019-10-08 20:35:03 (1127440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2019-10-08 20:35:03 (1127440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2019-10-08 20:35:03 (1127440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2019-10-08 20:35:03 (1127440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2019-10-08 20:35:03 (1127440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2019-10-08 20:35:03 (1127440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2019-10-08 20:35:03 (1127440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2019-10-08 20:35:03 (1127440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2019-10-08 20:35:03 (1127440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2019-10-08 20:35:03 (1127440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2019-10-08 20:35:03 (1127440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2019-10-08 20:35:03 (1127440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2019-10-08 20:35:03 (1127440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2019-10-08 20:35:03 (1127440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2019-10-08 20:35:08 (1127440): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2019-10-08 20:35:08 (1127440): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2019-10-08 20:35:09 (1127440): Guest Log: Checking CVMFS...
2019-10-08 20:35:12 (1127440): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2019-10-08 20:35:12 (1127440): Guest Log: 00:00:00.000136 main     Log opened 2019-10-08T20:35:10.935739000Z
2019-10-08 20:35:12 (1127440): Guest Log: 00:00:00.000218 main     OS Product: Linux
2019-10-08 20:35:12 (1127440): Guest Log: 00:00:00.000243 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2019-10-08 20:35:12 (1127440): Guest Log: 00:00:00.000262 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2019-10-08 20:35:12 (1127440): Guest Log: 00:00:00.000281 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2019-10-08 20:35:12 (1127440): Guest Log: 00:00:00.000281 main     Process ID: 1812
2019-10-08 20:35:12 (1127440): Guest Log: 00:00:00.000282 main     Package type: LINUX_64BITS_GENERIC
2019-10-08 20:35:12 (1127440): Guest Log: 00:00:00.001329 main     5.2.32 r132073 started. Verbose level = 0
2019-10-08 20:35:13 (1127440): Guest Log: CVMFS is ok
2019-10-08 20:35:13 (1127440): Guest Log: Mounting shared directory
2019-10-08 20:35:13 (1127440): Guest Log: Copying input files
2019-10-08 20:35:14 (1127440): Guest Log: Copied input files into RunAtlas.
2019-10-08 20:35:14 (1127440): Guest Log: copied the webapp to /var/www
2019-10-08 20:35:14 (1127440): Guest Log: set up http_proxy http://pcoslo5:3128
2019-10-08 20:35:14 (1127440): Guest Log: Detected squid proxy http://pcoslo5:3128 - will set in /etc/cvmfs/default.local
2019-10-08 20:35:22 (1127440): Guest Log: 00:00:10.002802 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 428 777 000ns (GuestNow=1 570 559 722 509 292 000 ns GuestLast=1 570 566 910 938 069 000 ns fSetTimeLastLoop=true )
2019-10-08 20:37:18 (1127440): Guest Log: ATHENA_PROC_NUMBER=4
2019-10-08 20:37:18 (1127440): Guest Log:  *** Starting ATLAS job. (PandaID=4502274396 taskID=19000509) ***
2019-10-08 22:14:00 (1127440): Status Report: Elapsed Time: '6000.000000'
2019-10-08 22:14:00 (1127440): Status Report: CPU Time: '22755.560000'
2019-10-08 23:53:00 (1127440): Status Report: Elapsed Time: '12000.000000'
2019-10-08 23:53:00 (1127440): Status Report: CPU Time: '46509.760000'
2019-10-09 01:32:01 (1127440): Status Report: Elapsed Time: '18000.000000'
2019-10-09 01:32:01 (1127440): Status Report: CPU Time: '70267.080000'
2019-10-09 03:10:47 (1127440): Guest Log:  *** Job finished ***
2019-10-09 03:10:47 (1127440): Guest Log:  *** The last 20 lines of the pilot log: ***
2019-10-09 03:10:47 (1127440): Guest Log: -rw-------.  1 atlas atlas 11357 Jul 25 14:38 LICENSE
2019-10-09 03:10:47 (1127440): Guest Log: -rw-------.  1 atlas atlas    20 Sep  9 11:04 MANIFEST.IN
2019-10-09 03:10:47 (1127440): Guest Log: -rw-------.  1 atlas atlas    11 Oct  8 18:37 pandaIDs.out
2019-10-09 03:10:47 (1127440): Guest Log: drwx------. 14 atlas atlas   216 Oct  8 18:37 pilot
2019-10-09 03:10:47 (1127440): Guest Log: -rwx------.  1 atlas atlas 20136 Sep  9 11:04 pilot.py
2019-10-09 03:10:47 (1127440): Guest Log: -rw-------.  1 atlas atlas     9 Sep  9 11:04 PILOTVERSION
2019-10-09 03:10:47 (1127440): Guest Log: -rw-------.  1 atlas atlas  2251 Jul 25 14:38 README.md
2019-10-09 03:10:47 (1127440): Guest Log: -rw-------.  1 atlas atlas   760 Aug 22 09:01 setup.py
2019-10-09 03:10:47 (1127440): Guest Log: -rw-------.  1 atlas atlas   221 Jul 25 14:38 TODO.md
2019-10-09 03:10:47 (1127440): Guest Log: 2019-10-09 01:10:47 UTC [wrapper] pandaIDs.out files:
2019-10-09 03:10:47 (1127440): Guest Log: -rw-------. 1 atlas atlas 11 Oct  8 18:37 /home/atlas/RunAtlas/pilot2/pandaIDs.out
2019-10-09 03:10:47 (1127440): Guest Log: 2019-10-09 01:10:47 UTC [wrapper] pandaIDs.out content:
2019-10-09 03:10:47 (1127440): Guest Log: 4502274396
2019-10-09 03:10:47 (1127440): Guest Log: 2019-10-09 01:10:47 UTC [wrapper] Test setup, not cleaning
2019-10-09 03:10:47 (1127440): Guest Log: 2019-10-09 01:10:47 UTC [wrapper] ==== wrapper stdout END ====
2019-10-09 03:10:47 (1127440): Guest Log: 2019-10-09 01:10:47 UTC [wrapper] ==== wrapper stderr END ====
2019-10-09 03:10:47 (1127440): Guest Log: 2019-10-09 01:10:47 UTC [wrapper] wrapper wrapperexiting ec=0, duration=23609
2019-10-09 03:10:47 (1127440): Guest Log: 2019-10-09 01:10:47 UTC [wrapper] apfmon messages muted
2019-10-09 03:10:47 (1127440): Guest Log:  *** Error codes and diagnostics ***
2019-10-09 03:10:47 (1127440): Guest Log:     "exeErrorCode": 0,
2019-10-09 03:10:47 (1127440): Guest Log:     "exeErrorDiag": "",
2019-10-09 03:10:47 (1127440): Guest Log:     "pilotErrorCode": 0,
2019-10-09 03:10:47 (1127440): Guest Log:     "pilotErrorDiag": "",
2019-10-09 03:10:47 (1127440): Guest Log:  *** Listing of results directory ***
2019-10-09 03:10:47 (1127440): Guest Log: total 261992
2019-10-09 03:10:47 (1127440): Guest Log: -rw-r--r--. 1 atlas atlas    259319 Oct  8 02:26 pilot2.tar.gz
2019-10-09 03:10:47 (1127440): Guest Log: -rw-r--r--. 1 atlas atlas      4480 Oct  8 03:11 queuedata.json
2019-10-09 03:10:47 (1127440): Guest Log: -rwx------. 1 atlas atlas     12762 Oct  8 03:11 runpilot2-wrapper.sh
2019-10-09 03:10:47 (1127440): Guest Log: -rw-------. 1 atlas atlas      2863 Oct  8 03:11 pandaJobData.out
2019-10-09 03:10:47 (1127440): Guest Log: -rw-r--r--. 1 atlas atlas    267515 Oct  8 18:35 input.tar.gz
2019-10-09 03:10:47 (1127440): Guest Log: -rw-r--r--. 1 atlas atlas       815 Oct  8 18:35 RTE.tar.gz
2019-10-09 03:10:47 (1127440): Guest Log: -rw-r--r--. 1 atlas atlas      8659 Oct  8 18:35 start_atlas.sh
2019-10-09 03:10:47 (1127440): Guest Log: -rw-r--r--. 1 atlas atlas      6278 Oct  8 18:35 init_data.xml
2019-10-09 03:10:47 (1127440): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct  8 18:35 EVNT.18605557._000362.pool.root.1 -> /data/./ATLAS.root_0
2019-10-09 03:10:47 (1127440): Guest Log: drwxr-xr-x. 3 atlas atlas        17 Oct  8 18:37 APPS
2019-10-09 03:10:47 (1127440): Guest Log: -rw-------. 1 atlas atlas       240 Oct  8 18:37 setup.sh.local
2019-10-09 03:10:47 (1127440): Guest Log: -rw-------. 1 atlas atlas   3936114 Oct  8 18:37 agis_schedconf.cvmfs.json
2019-10-09 03:10:47 (1127440): Guest Log: -rw-------. 1 atlas atlas   7613799 Oct  8 18:37 agis_ddmendpoints.json
2019-10-09 03:10:47 (1127440): Guest Log: drwx------. 3 atlas atlas       229 Oct  8 18:37 pilot2
2019-10-09 03:10:47 (1127440): Guest Log: -rw-------. 1 atlas atlas 251698173 Oct  9 01:09 HITS.19000509._024950.pool.root.1
2019-10-09 03:10:47 (1127440): Guest Log: -rw-------. 1 atlas atlas       790 Oct  9 01:10 memory_monitor_summary.json
2019-10-09 03:10:47 (1127440): Guest Log: -rw-------. 1 atlas atlas    892025 Oct  9 01:10 log.19000509._024950.job.log.tgz.1
2019-10-09 03:10:47 (1127440): Guest Log: -rw-------. 1 atlas atlas     80607 Oct  9 01:10 heartbeat.json
2019-10-09 03:10:47 (1127440): Guest Log: -rw-------. 1 atlas atlas     11229 Oct  9 01:10 pilotlog.txt
2019-10-09 03:10:47 (1127440): Guest Log: -rw-------. 1 atlas atlas   1220914 Oct  9 01:10 log.19000509._024950.job.log.1
2019-10-09 03:10:47 (1127440): Guest Log: -rw-------. 1 atlas atlas       515 Oct  9 01:10 BAxLDmY5ubvnShfckohDCDFpABFKDmABFKDm0ShXDmABFKDmzegtLm.diag
2019-10-09 03:10:47 (1127440): Guest Log: -rw-r--r--. 1 atlas atlas      7721 Oct  9 01:10 runtime_log.err
2019-10-09 03:10:47 (1127440): Guest Log: -rw-------. 1 atlas atlas       463 Oct  9 01:10 output.list
2019-10-09 03:10:47 (1127440): Guest Log: -rw-r--r--. 1 atlas atlas       692 Oct  9 01:10 runtime_log
2019-10-09 03:10:47 (1127440): Guest Log: -rw-------. 1 atlas atlas   2201600 Oct  9 01:10 result.tar.gz
2019-10-09 03:10:47 (1127440): Guest Log: Looking for outputfile HITS.19000509._024950.pool.root.1
2019-10-09 03:10:47 (1127440): Guest Log: HITS file was successfully produced
2019-10-09 03:10:47 (1127440): Guest Log: -rw-------. 1 atlas atlas 251698173 Oct  9 01:09 /home/atlas/RunAtlas/HITS.19000509._024950.pool.root.1
2019-10-09 03:10:48 (1127440): Guest Log: Successfully finished the ATLAS job!
2019-10-09 03:10:48 (1127440): Guest Log: Copying the results back to the shared directory!
2019-10-09 03:10:48 (1127440): Guest Log:  *** Contents of shared directory: ***
2019-10-09 03:10:48 (1127440): Guest Log: total 487332
2019-10-09 03:10:48 (1127440): Guest Log: -rw-r--r--. 1 root root 244829542 Oct  8 18:34 ATLAS.root_0
2019-10-09 03:10:48 (1127440): Guest Log: -rw-r--r--. 1 root root 251698173 Oct  9 01:09 HITS.pool.root.1
2019-10-09 03:10:48 (1127440): Guest Log: -rw-r--r--. 1 root root      6278 Oct  8 18:34 init_data.xml
2019-10-09 03:10:48 (1127440): Guest Log: -rw-r--r--. 1 root root    267515 Oct  8 18:34 input.tar.gz
2019-10-09 03:10:48 (1127440): Guest Log: -rw-r--r--. 1 root root   2201600 Oct  9 01:10 result.tar.gz
2019-10-09 03:10:48 (1127440): Guest Log: -rw-r--r--. 1 root root       815 Oct  8 18:34 RTE.tar.gz
2019-10-09 03:10:48 (1127440): Guest Log: -rw-r--r--. 1 root root      8659 Oct  8 18:34 start_atlas.sh
2019-10-09 03:10:48 (1127440): Guest Log:  *** Success! Shutting down the machine. ***
2019-10-09 03:10:49 (1127440): VM Completion File Detected.
2019-10-09 03:10:49 (1127440): Powering off VM.
2019-10-09 03:10:50 (1127440): Successfully stopped VM.
2019-10-09 03:10:50 (1127440): Deregistering VM. (boinc_c54d12b27056ed22, slot#0)
2019-10-09 03:10:50 (1127440): Removing network bandwidth throttle group from VM.
2019-10-09 03:10:50 (1127440): Removing storage controller(s) from VM.
2019-10-09 03:10:50 (1127440): Removing VM from VirtualBox.
2019-10-09 03:10:50 (1127440): Removing virtual disk drive from VirtualBox.
03:10:55 (1127440): called boinc_finish(0)

</stderr_txt>
]]>


©2024 CERN