Name | BZCODmZ20bvnShfckohDCDFpABFKDmABFKDmahqXDmABFKDm1BvVtm_0 |
Workunit | 1943787 |
Created | 8 Oct 2019, 9:35:00 UTC |
Sent | 9 Oct 2019, 6:47:55 UTC |
Report deadline | 16 Oct 2019, 6:47:55 UTC |
Received | 14 Oct 2019, 15:02:51 UTC |
Server state | Over |
Outcome | Validate error |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 3682 |
Run time | 7 min 5 sec |
CPU time | 2 min 58 sec |
Validate state | Invalid |
Credit | 0.00 |
Device peak FLOPS | 17.83 GFLOPS |
Application version | ATLAS Simulation v0.87 (vbox64_mt_mcore_atlas) x86_64-pc-linux-gnu |
Peak working set size | 1.47 GB |
Peak swap size | 6.79 GB |
Peak disk usage | 3.83 GB |
<core_client_version>7.16.1</core_client_version> <![CDATA[ <stderr_txt> 2019-10-14 16:55:41 (3365479): vboxwrapper (7.7.26197): starting 2019-10-14 16:55:41 (3365479): Feature: Checkpoint interval offset (522 seconds) 2019-10-14 16:55:41 (3365479): Detected: VirtualBox VboxManage Interface (Version: 5.2.32) 2019-10-14 16:55:41 (3365479): Detected: Minimum checkpoint interval (900.000000 seconds) 2019-10-14 16:55:41 (3365479): Successfully copied 'init_data.xml' to the shared directory. 2019-10-14 16:55:41 (3365479): Create VM. (boinc_4d9da1f67b1664b5, slot#0) 2019-10-14 16:55:41 (3365479): Setting Memory Size for VM. (6600MB) 2019-10-14 16:55:41 (3365479): Setting CPU Count for VM. (4) 2019-10-14 16:55:41 (3365479): Setting Chipset Options for VM. 2019-10-14 16:55:41 (3365479): Setting Boot Options for VM. 2019-10-14 16:55:41 (3365479): Setting Network Configuration for NAT. 2019-10-14 16:55:41 (3365479): Enabling VM Network Access. 2019-10-14 16:55:41 (3365479): Disabling USB Support for VM. 2019-10-14 16:55:41 (3365479): Disabling COM Port Support for VM. 2019-10-14 16:55:41 (3365479): Disabling LPT Port Support for VM. 2019-10-14 16:55:41 (3365479): Disabling Audio Support for VM. 2019-10-14 16:55:42 (3365479): Disabling Clipboard Support for VM. 2019-10-14 16:55:42 (3365479): Disabling Drag and Drop Support for VM. 2019-10-14 16:55:42 (3365479): Adding storage controller(s) to VM. 2019-10-14 16:55:42 (3365479): Adding virtual disk drive to VM. (vm_image.vdi) 2019-10-14 16:55:42 (3365479): Adding VirtualBox Guest Additions to VM. 2019-10-14 16:55:42 (3365479): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB) 2019-10-14 16:55:42 (3365479): forwarding host port 17950 to guest port 80 2019-10-14 16:55:42 (3365479): Enabling remote desktop for VM. 2019-10-14 16:55:42 (3365479): Enabling shared directory for VM. 2019-10-14 16:55:42 (3365479): Starting VM. (boinc_4d9da1f67b1664b5, slot#0) 2019-10-14 16:55:43 (3365479): Successfully started VM. (PID = '3365945') 2019-10-14 16:55:43 (3365479): Reporting VM Process ID to BOINC. 2019-10-14 16:55:43 (3365479): Guest Log: BIOS: VirtualBox 5.2.32 2019-10-14 16:55:43 (3365479): Guest Log: CPUID EDX: 0x178bfbff 2019-10-14 16:55:43 (3365479): Guest Log: BIOS: ata0-0: PCHS=16383/16/63 LCHS=1024/255/63 2019-10-14 16:55:44 (3365479): VM state change detected. (old = 'poweroff', new = 'running') 2019-10-14 16:55:44 (3365479): Detected: Web Application Enabled (http://localhost:17950) 2019-10-14 16:55:44 (3365479): Detected: Remote Desktop Enabled (localhost:46509) 2019-10-14 16:55:44 (3365479): Preference change detected 2019-10-14 16:55:44 (3365479): Setting CPU throttle for VM. (100%) 2019-10-14 16:55:44 (3365479): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds)) 2019-10-14 16:55:46 (3365479): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032 2019-10-14 16:55:46 (3365479): Guest Log: BIOS: Booting from Hard Disk... 2019-10-14 16:55:48 (3365479): Guest Log: BIOS: KBD: unsupported int 16h function 03 2019-10-14 16:55:48 (3365479): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 2019-10-14 16:55:48 (3365479): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81 2019-10-14 16:55:48 (3365479): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81 2019-10-14 16:55:48 (3365479): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82 2019-10-14 16:55:48 (3365479): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82 2019-10-14 16:55:48 (3365479): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83 2019-10-14 16:55:48 (3365479): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83 2019-10-14 16:55:48 (3365479): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84 2019-10-14 16:55:48 (3365479): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84 2019-10-14 16:55:48 (3365479): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85 2019-10-14 16:55:48 (3365479): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85 2019-10-14 16:55:48 (3365479): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86 2019-10-14 16:55:48 (3365479): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86 2019-10-14 16:55:48 (3365479): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87 2019-10-14 16:55:48 (3365479): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87 2019-10-14 16:55:48 (3365479): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88 2019-10-14 16:55:48 (3365479): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88 2019-10-14 16:55:48 (3365479): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89 2019-10-14 16:55:48 (3365479): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89 2019-10-14 16:55:48 (3365479): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a 2019-10-14 16:55:48 (3365479): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a 2019-10-14 16:55:48 (3365479): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b 2019-10-14 16:55:48 (3365479): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b 2019-10-14 16:55:48 (3365479): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c 2019-10-14 16:55:48 (3365479): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c 2019-10-14 16:55:48 (3365479): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d 2019-10-14 16:55:48 (3365479): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d 2019-10-14 16:55:48 (3365479): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e 2019-10-14 16:55:48 (3365479): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e 2019-10-14 16:55:48 (3365479): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f 2019-10-14 16:55:48 (3365479): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f 2019-10-14 16:55:51 (3365479): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds 2019-10-14 16:55:51 (3365479): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000) 2019-10-14 16:55:52 (3365479): Guest Log: Checking CVMFS... 2019-10-14 16:55:54 (3365479): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log 2019-10-14 16:55:54 (3365479): Guest Log: 00:00:00.000199 main Log opened 2019-10-14T16:55:52.566421000Z 2019-10-14 16:55:54 (3365479): Guest Log: 00:00:00.000358 main OS Product: Linux 2019-10-14 16:55:54 (3365479): Guest Log: 00:00:00.000407 main OS Release: 3.10.0-957.27.2.el7.x86_64 2019-10-14 16:55:54 (3365479): Guest Log: 00:00:00.000441 main OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019 2019-10-14 16:55:54 (3365479): Guest Log: 00:00:00.000473 main Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService 2019-10-14 16:55:54 (3365479): Guest Log: 00:00:00.000474 main Process ID: 1728 2019-10-14 16:55:54 (3365479): Guest Log: 00:00:00.000475 main Package type: LINUX_64BITS_GENERIC 2019-10-14 16:55:54 (3365479): Guest Log: 00:00:00.001499 main 5.2.32 r132073 started. Verbose level = 0 2019-10-14 16:55:54 (3365479): Guest Log: CVMFS is ok 2019-10-14 16:55:54 (3365479): Guest Log: Mounting shared directory 2019-10-14 16:55:55 (3365479): Guest Log: Copying input files 2019-10-14 16:55:56 (3365479): Guest Log: Copied input files into RunAtlas. 2019-10-14 16:55:56 (3365479): Guest Log: copied the webapp to /var/www 2019-10-14 16:55:56 (3365479): Guest Log: set up http_proxy http://pcoslo5:3128 2019-10-14 16:55:56 (3365479): Guest Log: Detected squid proxy http://pcoslo5:3128 - will set in /etc/cvmfs/default.local 2019-10-14 16:56:04 (3365479): Guest Log: 00:00:10.003418 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 186 164 000ns (GuestNow=1 571 064 964 383 217 000 ns GuestLast=1 571 072 152 569 381 000 ns fSetTimeLastLoop=true ) 2019-10-14 16:58:01 (3365479): Guest Log: ATHENA_PROC_NUMBER=4 2019-10-14 16:58:01 (3365479): Guest Log: *** Starting ATLAS job. (PandaID=4502189037 taskID=19056279) *** 2019-10-14 17:02:38 (3365479): Guest Log: *** Job finished *** 2019-10-14 17:02:38 (3365479): Guest Log: *** The last 20 lines of the pilot log: *** 2019-10-14 17:02:38 (3365479): Guest Log: -rw-------. 1 atlas atlas 11357 Jul 25 14:38 LICENSE 2019-10-14 17:02:38 (3365479): Guest Log: -rw-------. 1 atlas atlas 20 Sep 9 11:04 MANIFEST.IN 2019-10-14 17:02:38 (3365479): Guest Log: -rw-------. 1 atlas atlas 11 Oct 14 14:58 pandaIDs.out 2019-10-14 17:02:38 (3365479): Guest Log: drwx------. 14 atlas atlas 216 Oct 14 14:58 pilot 2019-10-14 17:02:38 (3365479): Guest Log: -rwx------. 1 atlas atlas 20136 Sep 9 11:04 pilot.py 2019-10-14 17:02:38 (3365479): Guest Log: -rw-------. 1 atlas atlas 9 Sep 9 11:04 PILOTVERSION 2019-10-14 17:02:38 (3365479): Guest Log: -rw-------. 1 atlas atlas 2251 Jul 25 14:38 README.md 2019-10-14 17:02:38 (3365479): Guest Log: -rw-------. 1 atlas atlas 760 Aug 22 09:01 setup.py 2019-10-14 17:02:38 (3365479): Guest Log: -rw-------. 1 atlas atlas 221 Jul 25 14:38 TODO.md 2019-10-14 17:02:38 (3365479): Guest Log: 2019-10-14 15:02:38 UTC [wrapper] pandaIDs.out files: 2019-10-14 17:02:38 (3365479): Guest Log: -rw-------. 1 atlas atlas 11 Oct 14 14:58 /home/atlas/RunAtlas/pilot2/pandaIDs.out 2019-10-14 17:02:38 (3365479): Guest Log: 2019-10-14 15:02:38 UTC [wrapper] pandaIDs.out content: 2019-10-14 17:02:38 (3365479): Guest Log: 4502189037 2019-10-14 17:02:38 (3365479): Guest Log: 2019-10-14 15:02:38 UTC [wrapper] Test setup, not cleaning 2019-10-14 17:02:38 (3365479): Guest Log: 2019-10-14 15:02:38 UTC [wrapper] ==== wrapper stdout END ==== 2019-10-14 17:02:38 (3365479): Guest Log: 2019-10-14 15:02:38 UTC [wrapper] ==== wrapper stderr END ==== 2019-10-14 17:02:38 (3365479): Guest Log: 2019-10-14 15:02:38 UTC [wrapper] wrapper wrapperexiting ec=0, duration=277 2019-10-14 17:02:38 (3365479): Guest Log: 2019-10-14 15:02:38 UTC [wrapper] apfmon messages muted 2019-10-14 17:02:38 (3365479): Guest Log: *** Error codes and diagnostics *** 2019-10-14 17:02:38 (3365479): Guest Log: "exeErrorCode": 65, 2019-10-14 17:02:38 (3365479): Guest Log: "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: \"Segmentation fault: Event counter: 0; Run: unknown; Evt: unknown; Current algorithm: ISF_Kernel_FullG4; Current Function: unknown\"", 2019-10-14 17:02:38 (3365479): Guest Log: "pilotErrorCode": 0, 2019-10-14 17:02:38 (3365479): Guest Log: "pilotErrorDiag": "", 2019-10-14 17:02:38 (3365479): Guest Log: *** Listing of results directory *** 2019-10-14 17:02:38 (3365479): Guest Log: total 12368 2019-10-14 17:02:38 (3365479): Guest Log: -rw-r--r--. 1 atlas atlas 259319 Oct 8 09:26 pilot2.tar.gz 2019-10-14 17:02:38 (3365479): Guest Log: -rw-r--r--. 1 atlas atlas 4480 Oct 8 09:30 queuedata.json 2019-10-14 17:02:38 (3365479): Guest Log: -rwx------. 1 atlas atlas 12762 Oct 8 09:32 runpilot2-wrapper.sh 2019-10-14 17:02:38 (3365479): Guest Log: -rw-------. 1 atlas atlas 2841 Oct 8 09:32 pandaJobData.out 2019-10-14 17:02:38 (3365479): Guest Log: -rw-r--r--. 1 atlas atlas 267508 Oct 14 14:55 input.tar.gz 2019-10-14 17:02:38 (3365479): Guest Log: -rw-r--r--. 1 atlas atlas 815 Oct 14 14:55 RTE.tar.gz 2019-10-14 17:02:38 (3365479): Guest Log: -rw-r--r--. 1 atlas atlas 8659 Oct 14 14:55 start_atlas.sh 2019-10-14 17:02:38 (3365479): Guest Log: -rw-r--r--. 1 atlas atlas 6278 Oct 14 14:55 init_data.xml 2019-10-14 17:02:38 (3365479): Guest Log: lrwxrwxrwx. 1 atlas atlas 20 Oct 14 14:55 EVNT.18605764._000053.pool.root.1 -> /data/./ATLAS.root_0 2019-10-14 17:02:38 (3365479): Guest Log: drwxr-xr-x. 3 atlas atlas 17 Oct 14 14:58 APPS 2019-10-14 17:02:38 (3365479): Guest Log: -rw-------. 1 atlas atlas 240 Oct 14 14:58 setup.sh.local 2019-10-14 17:02:38 (3365479): Guest Log: -rw-------. 1 atlas atlas 3952343 Oct 14 14:58 agis_schedconf.cvmfs.json 2019-10-14 17:02:38 (3365479): Guest Log: -rw-------. 1 atlas atlas 7640262 Oct 14 14:58 agis_ddmendpoints.json 2019-10-14 17:02:38 (3365479): Guest Log: drwx------. 3 atlas atlas 229 Oct 14 14:58 pilot2 2019-10-14 17:02:38 (3365479): Guest Log: -rw-------. 1 atlas atlas 780 Oct 14 15:01 memory_monitor_summary.json 2019-10-14 17:02:38 (3365479): Guest Log: -rw-------. 1 atlas atlas 76382 Oct 14 15:01 log.19056279._005621.job.log.tgz.1 2019-10-14 17:02:38 (3365479): Guest Log: -rw-------. 1 atlas atlas 7852 Oct 14 15:01 heartbeat.json 2019-10-14 17:02:38 (3365479): Guest Log: -rw-------. 1 atlas atlas 11681 Oct 14 15:02 pilotlog.txt 2019-10-14 17:02:38 (3365479): Guest Log: -rw-------. 1 atlas atlas 129084 Oct 14 15:02 log.19056279._005621.job.log.1 2019-10-14 17:02:38 (3365479): Guest Log: -rw-------. 1 atlas atlas 498 Oct 14 15:02 BZCODmZ20bvnShfckohDCDFpABFKDmABFKDmahqXDmABFKDm1BvVtm.diag 2019-10-14 17:02:38 (3365479): Guest Log: -rw-------. 1 atlas atlas 241 Oct 14 15:02 output.list 2019-10-14 17:02:38 (3365479): Guest Log: -rw-r--r--. 1 atlas atlas 7569 Oct 14 15:02 runtime_log.err 2019-10-14 17:02:38 (3365479): Guest Log: -rw-r--r--. 1 atlas atlas 692 Oct 14 15:02 runtime_log 2019-10-14 17:02:38 (3365479): Guest Log: -rw-------. 1 atlas atlas 225280 Oct 14 15:02 result.tar.gz 2019-10-14 17:02:38 (3365479): Guest Log: Looking for outputfile HITS.19056279._005621.pool.root.1 2019-10-14 17:02:38 (3365479): Guest Log: No HITS file was produced 2019-10-14 17:02:38 (3365479): Guest Log: Successfully finished the ATLAS job! 2019-10-14 17:02:38 (3365479): Guest Log: Copying the results back to the shared directory! 2019-10-14 17:02:38 (3365479): Guest Log: *** Contents of shared directory: *** 2019-10-14 17:02:38 (3365479): Guest Log: total 256672 2019-10-14 17:02:38 (3365479): Guest Log: -rw-r--r--. 1 root root 262308753 Oct 14 14:55 ATLAS.root_0 2019-10-14 17:02:38 (3365479): Guest Log: -rw-r--r--. 1 root root 6278 Oct 14 14:55 init_data.xml 2019-10-14 17:02:38 (3365479): Guest Log: -rw-r--r--. 1 root root 267508 Oct 14 14:55 input.tar.gz 2019-10-14 17:02:38 (3365479): Guest Log: -rw-r--r--. 1 root root 225280 Oct 14 15:02 result.tar.gz 2019-10-14 17:02:38 (3365479): Guest Log: -rw-r--r--. 1 root root 815 Oct 14 14:55 RTE.tar.gz 2019-10-14 17:02:38 (3365479): Guest Log: -rw-r--r--. 1 root root 8659 Oct 14 14:55 start_atlas.sh 2019-10-14 17:02:38 (3365479): Guest Log: *** Success! Shutting down the machine. *** 2019-10-14 17:02:38 (3365479): VM Completion File Detected. 2019-10-14 17:02:38 (3365479): Powering off VM. 2019-10-14 17:02:39 (3365479): Successfully stopped VM. 2019-10-14 17:02:39 (3365479): Deregistering VM. (boinc_4d9da1f67b1664b5, slot#0) 2019-10-14 17:02:39 (3365479): Removing network bandwidth throttle group from VM. 2019-10-14 17:02:39 (3365479): Removing storage controller(s) from VM. 2019-10-14 17:02:39 (3365479): Removing VM from VirtualBox. 2019-10-14 17:02:39 (3365479): Removing virtual disk drive from VirtualBox. 17:02:45 (3365479): called boinc_finish(0) </stderr_txt> ]]>
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