Name | UqcMDmL1KcvnShfckohDCDFpABFKDmABFKDmnWLYDmABFKDmfsw8ym_1 |
Workunit | 1943933 |
Created | 10 Oct 2019, 15:23:23 UTC |
Sent | 14 Oct 2019, 14:55:29 UTC |
Report deadline | 21 Oct 2019, 14:55:29 UTC |
Received | 15 Oct 2019, 3:11:34 UTC |
Server state | Over |
Outcome | Validate error |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 3682 |
Run time | 5 min 10 sec |
CPU time | 2 min 49 sec |
Validate state | Invalid |
Credit | 0.00 |
Device peak FLOPS | 17.83 GFLOPS |
Application version | ATLAS Simulation v0.87 (vbox64_mt_mcore_atlas) x86_64-pc-linux-gnu |
Peak working set size | 1.38 GB |
Peak swap size | 6.98 GB |
Peak disk usage | 3.11 GB |
<core_client_version>7.16.1</core_client_version> <![CDATA[ <stderr_txt> 2019-10-15 04:51:15 (66254): vboxwrapper (7.7.26197): starting 2019-10-15 04:51:15 (66254): Feature: Checkpoint interval offset (39 seconds) 2019-10-15 04:51:15 (66254): Detected: VirtualBox VboxManage Interface (Version: 5.2.32) 2019-10-15 04:51:15 (66254): Detected: Minimum checkpoint interval (900.000000 seconds) 2019-10-15 04:51:15 (66254): Successfully copied 'init_data.xml' to the shared directory. 2019-10-15 04:51:15 (66254): Create VM. (boinc_0de91c2c9a65a46f, slot#0) 2019-10-15 04:51:15 (66254): Setting Memory Size for VM. (6600MB) 2019-10-15 04:51:15 (66254): Setting CPU Count for VM. (4) 2019-10-15 04:51:15 (66254): Setting Chipset Options for VM. 2019-10-15 04:51:15 (66254): Setting Boot Options for VM. 2019-10-15 04:51:15 (66254): Setting Network Configuration for NAT. 2019-10-15 04:51:15 (66254): Enabling VM Network Access. 2019-10-15 04:51:15 (66254): Disabling USB Support for VM. 2019-10-15 04:51:15 (66254): Disabling COM Port Support for VM. 2019-10-15 04:51:15 (66254): Disabling LPT Port Support for VM. 2019-10-15 04:51:16 (66254): Disabling Audio Support for VM. 2019-10-15 04:51:16 (66254): Disabling Clipboard Support for VM. 2019-10-15 04:51:16 (66254): Disabling Drag and Drop Support for VM. 2019-10-15 04:51:16 (66254): Adding storage controller(s) to VM. 2019-10-15 04:51:16 (66254): Adding virtual disk drive to VM. (vm_image.vdi) 2019-10-15 04:51:16 (66254): Adding VirtualBox Guest Additions to VM. 2019-10-15 04:51:16 (66254): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB) 2019-10-15 04:51:16 (66254): forwarding host port 20179 to guest port 80 2019-10-15 04:51:16 (66254): Enabling remote desktop for VM. 2019-10-15 04:51:16 (66254): Enabling shared directory for VM. 2019-10-15 04:51:16 (66254): Starting VM. (boinc_0de91c2c9a65a46f, slot#0) 2019-10-15 04:51:17 (66254): Successfully started VM. (PID = '66723') 2019-10-15 04:51:17 (66254): Reporting VM Process ID to BOINC. 2019-10-15 04:51:17 (66254): Guest Log: BIOS: VirtualBox 5.2.32 2019-10-15 04:51:17 (66254): Guest Log: CPUID EDX: 0x178bfbff 2019-10-15 04:51:17 (66254): Guest Log: BIOS: ata0-0: PCHS=16383/16/63 LCHS=1024/255/63 2019-10-15 04:51:18 (66254): VM state change detected. (old = 'poweroff', new = 'running') 2019-10-15 04:51:18 (66254): Detected: Web Application Enabled (http://localhost:20179) 2019-10-15 04:51:18 (66254): Detected: Remote Desktop Enabled (localhost:53056) 2019-10-15 04:51:18 (66254): Preference change detected 2019-10-15 04:51:18 (66254): Setting CPU throttle for VM. (100%) 2019-10-15 04:51:18 (66254): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds)) 2019-10-15 04:51:20 (66254): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032 2019-10-15 04:51:20 (66254): Guest Log: BIOS: Booting from Hard Disk... 2019-10-15 04:51:22 (66254): Guest Log: BIOS: KBD: unsupported int 16h function 03 2019-10-15 04:51:22 (66254): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 2019-10-15 04:51:22 (66254): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81 2019-10-15 04:51:22 (66254): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81 2019-10-15 04:51:22 (66254): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82 2019-10-15 04:51:22 (66254): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82 2019-10-15 04:51:22 (66254): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83 2019-10-15 04:51:22 (66254): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83 2019-10-15 04:51:22 (66254): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84 2019-10-15 04:51:22 (66254): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84 2019-10-15 04:51:22 (66254): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85 2019-10-15 04:51:22 (66254): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85 2019-10-15 04:51:22 (66254): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86 2019-10-15 04:51:22 (66254): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86 2019-10-15 04:51:22 (66254): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87 2019-10-15 04:51:22 (66254): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87 2019-10-15 04:51:22 (66254): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88 2019-10-15 04:51:22 (66254): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88 2019-10-15 04:51:22 (66254): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89 2019-10-15 04:51:22 (66254): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89 2019-10-15 04:51:22 (66254): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a 2019-10-15 04:51:22 (66254): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a 2019-10-15 04:51:22 (66254): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b 2019-10-15 04:51:22 (66254): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b 2019-10-15 04:51:22 (66254): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c 2019-10-15 04:51:22 (66254): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c 2019-10-15 04:51:22 (66254): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d 2019-10-15 04:51:22 (66254): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d 2019-10-15 04:51:22 (66254): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e 2019-10-15 04:51:22 (66254): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e 2019-10-15 04:51:22 (66254): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f 2019-10-15 04:51:22 (66254): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f 2019-10-15 04:51:25 (66254): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds 2019-10-15 04:51:25 (66254): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000) 2019-10-15 04:51:26 (66254): Guest Log: Checking CVMFS... 2019-10-15 04:51:29 (66254): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log 2019-10-15 04:51:29 (66254): Guest Log: 00:00:00.000153 main Log opened 2019-10-15T04:51:27.324650000Z 2019-10-15 04:51:29 (66254): Guest Log: 00:00:00.000226 main OS Product: Linux 2019-10-15 04:51:29 (66254): Guest Log: 00:00:00.000248 main OS Release: 3.10.0-957.27.2.el7.x86_64 2019-10-15 04:51:29 (66254): Guest Log: 00:00:00.000265 main OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019 2019-10-15 04:51:29 (66254): Guest Log: 00:00:00.000281 main Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService 2019-10-15 04:51:29 (66254): Guest Log: 00:00:00.000282 main Process ID: 1813 2019-10-15 04:51:29 (66254): Guest Log: 00:00:00.000282 main Package type: LINUX_64BITS_GENERIC 2019-10-15 04:51:29 (66254): Guest Log: 00:00:00.001513 main 5.2.32 r132073 started. Verbose level = 0 2019-10-15 04:51:30 (66254): Guest Log: CVMFS is ok 2019-10-15 04:51:30 (66254): Guest Log: Mounting shared directory 2019-10-15 04:51:30 (66254): Guest Log: Copying input files 2019-10-15 04:51:31 (66254): Guest Log: Copied input files into RunAtlas. 2019-10-15 04:51:31 (66254): Guest Log: copied the webapp to /var/www 2019-10-15 04:51:31 (66254): Guest Log: set up http_proxy http://pcoslo5:3128 2019-10-15 04:51:31 (66254): Guest Log: Detected squid proxy http://pcoslo5:3128 - will set in /etc/cvmfs/default.local 2019-10-15 04:51:39 (66254): Guest Log: 00:00:10.003109 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 197 052 000ns (GuestNow=1 571 107 899 130 256 000 ns GuestLast=1 571 115 087 327 308 000 ns fSetTimeLastLoop=true ) 2019-10-15 04:53:35 (66254): Guest Log: ATHENA_PROC_NUMBER=4 2019-10-15 04:53:35 (66254): Guest Log: *** Starting ATLAS job. (PandaID=4503025409 taskID=19056279) *** 2019-10-15 04:56:17 (66254): Guest Log: *** Job finished *** 2019-10-15 04:56:17 (66254): Guest Log: *** The last 20 lines of the pilot log: *** 2019-10-15 04:56:17 (66254): Guest Log: -rw-------. 1 atlas atlas 11357 Jul 25 14:38 LICENSE 2019-10-15 04:56:17 (66254): Guest Log: -rw-------. 1 atlas atlas 20 Sep 9 11:04 MANIFEST.IN 2019-10-15 04:56:17 (66254): Guest Log: -rw-------. 1 atlas atlas 11 Oct 15 02:53 pandaIDs.out 2019-10-15 04:56:17 (66254): Guest Log: drwx------. 14 atlas atlas 216 Oct 15 02:53 pilot 2019-10-15 04:56:17 (66254): Guest Log: -rwx------. 1 atlas atlas 20136 Sep 9 11:04 pilot.py 2019-10-15 04:56:17 (66254): Guest Log: -rw-------. 1 atlas atlas 9 Sep 9 11:04 PILOTVERSION 2019-10-15 04:56:17 (66254): Guest Log: -rw-------. 1 atlas atlas 2251 Jul 25 14:38 README.md 2019-10-15 04:56:17 (66254): Guest Log: -rw-------. 1 atlas atlas 760 Aug 22 09:01 setup.py 2019-10-15 04:56:17 (66254): Guest Log: -rw-------. 1 atlas atlas 221 Jul 25 14:38 TODO.md 2019-10-15 04:56:17 (66254): Guest Log: 2019-10-15 02:56:16 UTC [wrapper] pandaIDs.out files: 2019-10-15 04:56:17 (66254): Guest Log: -rw-------. 1 atlas atlas 11 Oct 15 02:53 /home/atlas/RunAtlas/pilot2/pandaIDs.out 2019-10-15 04:56:17 (66254): Guest Log: 2019-10-15 02:56:16 UTC [wrapper] pandaIDs.out content: 2019-10-15 04:56:17 (66254): Guest Log: 4503025409 2019-10-15 04:56:17 (66254): Guest Log: 2019-10-15 02:56:16 UTC [wrapper] Test setup, not cleaning 2019-10-15 04:56:17 (66254): Guest Log: 2019-10-15 02:56:16 UTC [wrapper] ==== wrapper stdout END ==== 2019-10-15 04:56:17 (66254): Guest Log: 2019-10-15 02:56:16 UTC [wrapper] ==== wrapper stderr END ==== 2019-10-15 04:56:17 (66254): Guest Log: 2019-10-15 02:56:16 UTC [wrapper] wrapper wrapperexiting ec=0, duration=161 2019-10-15 04:56:17 (66254): Guest Log: 2019-10-15 02:56:16 UTC [wrapper] apfmon messages muted 2019-10-15 04:56:17 (66254): Guest Log: *** Error codes and diagnostics *** 2019-10-15 04:56:17 (66254): Guest Log: "exeErrorCode": 65, 2019-10-15 04:56:17 (66254): Guest Log: "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"Segmentation fault: Event counter: 0; Run: unknown; Evt: unknown; Current algorithm: PyG4AtlasAlg; Current Function: unknown\"", 2019-10-15 04:56:17 (66254): Guest Log: "pilotErrorCode": 0, 2019-10-15 04:56:17 (66254): Guest Log: "pilotErrorDiag": "", 2019-10-15 04:56:17 (66254): Guest Log: *** Listing of results directory *** 2019-10-15 04:56:17 (66254): Guest Log: total 12400 2019-10-15 04:56:17 (66254): Guest Log: -rw-r--r--. 1 atlas atlas 259319 Oct 9 06:38 pilot2.tar.gz 2019-10-15 04:56:17 (66254): Guest Log: -rw-r--r--. 1 atlas atlas 4480 Oct 9 06:50 queuedata.json 2019-10-15 04:56:17 (66254): Guest Log: -rwx------. 1 atlas atlas 12762 Oct 9 06:52 runpilot2-wrapper.sh 2019-10-15 04:56:17 (66254): Guest Log: -rw-------. 1 atlas atlas 2841 Oct 9 06:52 pandaJobData.out 2019-10-15 04:56:17 (66254): Guest Log: -rw-r--r--. 1 atlas atlas 267509 Oct 15 02:51 input.tar.gz 2019-10-15 04:56:17 (66254): Guest Log: -rw-r--r--. 1 atlas atlas 815 Oct 15 02:51 RTE.tar.gz 2019-10-15 04:56:17 (66254): Guest Log: -rw-r--r--. 1 atlas atlas 8659 Oct 15 02:51 start_atlas.sh 2019-10-15 04:56:17 (66254): Guest Log: -rw-r--r--. 1 atlas atlas 6278 Oct 15 02:51 init_data.xml 2019-10-15 04:56:17 (66254): Guest Log: lrwxrwxrwx. 1 atlas atlas 20 Oct 15 02:51 EVNT.18605764._000072.pool.root.1 -> /data/./ATLAS.root_0 2019-10-15 04:56:17 (66254): Guest Log: drwxr-xr-x. 3 atlas atlas 17 Oct 15 02:53 APPS 2019-10-15 04:56:17 (66254): Guest Log: -rw-------. 1 atlas atlas 240 Oct 15 02:53 setup.sh.local 2019-10-15 04:56:17 (66254): Guest Log: -rw-------. 1 atlas atlas 3952360 Oct 15 02:53 agis_schedconf.cvmfs.json 2019-10-15 04:56:17 (66254): Guest Log: -rw-------. 1 atlas atlas 7640262 Oct 15 02:53 agis_ddmendpoints.json 2019-10-15 04:56:17 (66254): Guest Log: drwx------. 3 atlas atlas 229 Oct 15 02:53 pilot2 2019-10-15 04:56:17 (66254): Guest Log: -rw-------. 1 atlas atlas 819 Oct 15 02:55 memory_monitor_summary.json 2019-10-15 04:56:17 (66254): Guest Log: -rw-------. 1 atlas atlas 87423 Oct 15 02:56 log.19056279._005887.job.log.tgz.1 2019-10-15 04:56:17 (66254): Guest Log: -rw-------. 1 atlas atlas 9907 Oct 15 02:56 heartbeat.json 2019-10-15 04:56:17 (66254): Guest Log: -rw-------. 1 atlas atlas 12167 Oct 15 02:56 pilotlog.txt 2019-10-15 04:56:17 (66254): Guest Log: -rw-------. 1 atlas atlas 132502 Oct 15 02:56 log.19056279._005887.job.log.1 2019-10-15 04:56:17 (66254): Guest Log: -rw-------. 1 atlas atlas 497 Oct 15 02:56 UqcMDmL1KcvnShfckohDCDFpABFKDmABFKDmnWLYDmABFKDmfsw8ym.diag 2019-10-15 04:56:17 (66254): Guest Log: -rw-r--r--. 1 atlas atlas 7569 Oct 15 02:56 runtime_log.err 2019-10-15 04:56:17 (66254): Guest Log: -rw-------. 1 atlas atlas 241 Oct 15 02:56 output.list 2019-10-15 04:56:17 (66254): Guest Log: -rw-r--r--. 1 atlas atlas 692 Oct 15 02:56 runtime_log 2019-10-15 04:56:17 (66254): Guest Log: -rw-------. 1 atlas atlas 235520 Oct 15 02:56 result.tar.gz 2019-10-15 04:56:17 (66254): Guest Log: Looking for outputfile HITS.19056279._005887.pool.root.1 2019-10-15 04:56:17 (66254): Guest Log: No HITS file was produced 2019-10-15 04:56:17 (66254): Guest Log: Successfully finished the ATLAS job! 2019-10-15 04:56:17 (66254): Guest Log: Copying the results back to the shared directory! 2019-10-15 04:56:17 (66254): Guest Log: *** Contents of shared directory: *** 2019-10-15 04:56:18 (66254): Guest Log: total 256684 2019-10-15 04:56:18 (66254): Guest Log: -rw-r--r--. 1 root root 262311470 Oct 15 02:51 ATLAS.root_0 2019-10-15 04:56:18 (66254): Guest Log: -rw-r--r--. 1 root root 6278 Oct 15 02:51 init_data.xml 2019-10-15 04:56:18 (66254): Guest Log: -rw-r--r--. 1 root root 267509 Oct 15 02:51 input.tar.gz 2019-10-15 04:56:18 (66254): Guest Log: -rw-r--r--. 1 root root 235520 Oct 15 02:56 result.tar.gz 2019-10-15 04:56:18 (66254): Guest Log: -rw-r--r--. 1 root root 815 Oct 15 02:51 RTE.tar.gz 2019-10-15 04:56:18 (66254): Guest Log: -rw-r--r--. 1 root root 8659 Oct 15 02:51 start_atlas.sh 2019-10-15 04:56:18 (66254): Guest Log: *** Success! Shutting down the machine. *** 2019-10-15 04:56:18 (66254): VM Completion File Detected. 2019-10-15 04:56:18 (66254): Powering off VM. 2019-10-15 04:56:18 (66254): Successfully stopped VM. 2019-10-15 04:56:18 (66254): Deregistering VM. (boinc_0de91c2c9a65a46f, slot#0) 2019-10-15 04:56:18 (66254): Removing network bandwidth throttle group from VM. 2019-10-15 04:56:18 (66254): Removing storage controller(s) from VM. 2019-10-15 04:56:18 (66254): Removing VM from VirtualBox. 2019-10-15 04:56:18 (66254): Removing virtual disk drive from VirtualBox. 04:56:24 (66254): called boinc_finish(0) </stderr_txt> ]]>
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