Name c4rNDmMQUhvnShfckohDCDFpABFKDmABFKDmp0qODmABFKDm7Q7Gen_0
Workunit 1946894
Created 23 Oct 2019, 11:57:03 UTC
Sent 23 Oct 2019, 12:09:07 UTC
Report deadline 30 Oct 2019, 12:09:07 UTC
Received 23 Oct 2019, 23:35:57 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 3682
Run time 5 hours 30 min 35 sec
CPU time 21 hours 27 min 6 sec
Validate state Valid
Credit 926.84
Device peak FLOPS 17.85 GFLOPS
Application version ATLAS Simulation v0.84 (vbox64_mt_mcore_atlas)
x86_64-pc-linux-gnu
Peak working set size 2.05 GB
Peak swap size 8.73 GB
Peak disk usage 3.89 GB

Stderr output

<core_client_version>7.16.1</core_client_version>
<![CDATA[
<stderr_txt>
2019-10-23 19:49:28 (2184212): vboxwrapper (7.7.26197): starting
2019-10-23 19:49:28 (2184212): Feature: Checkpoint interval offset (449 seconds)
2019-10-23 19:49:28 (2184212): Detected: VirtualBox VboxManage Interface (Version: 5.2.32)
2019-10-23 19:49:28 (2184212): Detected: Minimum checkpoint interval (900.000000 seconds)
2019-10-23 19:49:28 (2184212): Successfully copied 'init_data.xml' to the shared directory.
2019-10-23 19:49:28 (2184212): Create VM. (boinc_1048cb6851cf2146, slot#0)
2019-10-23 19:49:28 (2184212): Setting Memory Size for VM. (6600MB)
2019-10-23 19:49:28 (2184212): Setting CPU Count for VM. (4)
2019-10-23 19:49:28 (2184212): Setting Chipset Options for VM.
2019-10-23 19:49:28 (2184212): Setting Boot Options for VM.
2019-10-23 19:49:28 (2184212): Setting Network Configuration for NAT.
2019-10-23 19:49:29 (2184212): Enabling VM Network Access.
2019-10-23 19:49:29 (2184212): Disabling USB Support for VM.
2019-10-23 19:49:29 (2184212): Disabling COM Port Support for VM.
2019-10-23 19:49:29 (2184212): Disabling LPT Port Support for VM.
2019-10-23 19:49:29 (2184212): Disabling Audio Support for VM.
2019-10-23 19:49:29 (2184212): Disabling Clipboard Support for VM.
2019-10-23 19:49:29 (2184212): Disabling Drag and Drop Support for VM.
2019-10-23 19:49:29 (2184212): Adding storage controller(s) to VM.
2019-10-23 19:49:29 (2184212): Adding virtual disk drive to VM. (vm_image.vdi)
2019-10-23 19:49:29 (2184212): Adding VirtualBox Guest Additions to VM.
2019-10-23 19:49:29 (2184212): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2019-10-23 19:49:29 (2184212): forwarding host port 30680 to guest port 80
2019-10-23 19:49:29 (2184212): Enabling remote desktop for VM.
2019-10-23 19:49:29 (2184212): Enabling shared directory for VM.
2019-10-23 19:49:29 (2184212): Starting VM. (boinc_1048cb6851cf2146, slot#0)
2019-10-23 19:49:31 (2184212): Successfully started VM. (PID = '2184679')
2019-10-23 19:49:31 (2184212): Reporting VM Process ID to BOINC.
2019-10-23 19:49:31 (2184212): Guest Log: BIOS: VirtualBox 5.2.32
2019-10-23 19:49:31 (2184212): Guest Log: CPUID EDX: 0x178bfbff
2019-10-23 19:49:31 (2184212): Guest Log: BIOS: ata0-0: PCHS=16383/16/63 LCHS=1024/255/63
2019-10-23 19:49:31 (2184212): VM state change detected. (old = 'poweroff', new = 'running')
2019-10-23 19:49:31 (2184212): Detected: Web Application Enabled (http://localhost:30680)
2019-10-23 19:49:31 (2184212): Detected: Remote Desktop Enabled (localhost:17885)
2019-10-23 19:49:31 (2184212): Preference change detected
2019-10-23 19:49:31 (2184212): Setting CPU throttle for VM. (100%)
2019-10-23 19:49:31 (2184212): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2019-10-23 19:49:33 (2184212): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2019-10-23 19:49:33 (2184212): Guest Log: BIOS: Booting from Hard Disk...
2019-10-23 19:49:35 (2184212): Guest Log: BIOS: KBD: unsupported int 16h function 03
2019-10-23 19:49:35 (2184212): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2019-10-23 19:49:35 (2184212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2019-10-23 19:49:35 (2184212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2019-10-23 19:49:35 (2184212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2019-10-23 19:49:35 (2184212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2019-10-23 19:49:35 (2184212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2019-10-23 19:49:35 (2184212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2019-10-23 19:49:35 (2184212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2019-10-23 19:49:35 (2184212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2019-10-23 19:49:35 (2184212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2019-10-23 19:49:35 (2184212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2019-10-23 19:49:35 (2184212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2019-10-23 19:49:35 (2184212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2019-10-23 19:49:35 (2184212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2019-10-23 19:49:35 (2184212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2019-10-23 19:49:35 (2184212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2019-10-23 19:49:35 (2184212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2019-10-23 19:49:35 (2184212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2019-10-23 19:49:35 (2184212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2019-10-23 19:49:35 (2184212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2019-10-23 19:49:35 (2184212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2019-10-23 19:49:35 (2184212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2019-10-23 19:49:35 (2184212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2019-10-23 19:49:35 (2184212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2019-10-23 19:49:35 (2184212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2019-10-23 19:49:35 (2184212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2019-10-23 19:49:35 (2184212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2019-10-23 19:49:35 (2184212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2019-10-23 19:49:35 (2184212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2019-10-23 19:49:35 (2184212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2019-10-23 19:49:35 (2184212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2019-10-23 19:49:38 (2184212): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2019-10-23 19:49:38 (2184212): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2019-10-23 19:49:39 (2184212): Guest Log: Checking CVMFS...
2019-10-23 19:49:42 (2184212): Guest Log: CVMFS is ok
2019-10-23 19:49:42 (2184212): Guest Log: Mounting shared directory
2019-10-23 19:49:42 (2184212): Guest Log: Copying input files
2019-10-23 19:49:42 (2184212): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2019-10-23 19:49:42 (2184212): Guest Log: 00:00:00.000142 main     Log opened 2019-10-23T19:49:40.844442000Z
2019-10-23 19:49:42 (2184212): Guest Log: 00:00:00.000222 main     OS Product: Linux
2019-10-23 19:49:42 (2184212): Guest Log: 00:00:00.000250 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2019-10-23 19:49:42 (2184212): Guest Log: 00:00:00.000271 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2019-10-23 19:49:42 (2184212): Guest Log: 00:00:00.000332 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2019-10-23 19:49:42 (2184212): Guest Log: 00:00:00.000333 main     Process ID: 1866
2019-10-23 19:49:42 (2184212): Guest Log: 00:00:00.000333 main     Package type: LINUX_64BITS_GENERIC
2019-10-23 19:49:42 (2184212): Guest Log: 00:00:00.001206 main     5.2.32 r132073 started. Verbose level = 0
2019-10-23 19:49:43 (2184212): Guest Log: Copied input files into RunAtlas.
2019-10-23 19:49:43 (2184212): Guest Log: copied the webapp to /var/www
2019-10-23 19:49:43 (2184212): Guest Log: This vm does not need to setup an http proxy
2019-10-23 19:49:43 (2184212): Guest Log: ATHENA_PROC_NUMBER=4
2019-10-23 19:49:44 (2184212): Guest Log:  *** Starting ATLAS job. (PandaID=4515897712 taskID=19000550) ***
2019-10-23 19:49:52 (2184212): Guest Log: 00:00:10.008645 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 933 465 000ns (GuestNow=1 571 852 991 913 222 000 ns GuestLast=1 571 860 180 846 687 000 ns fSetTimeLastLoop=true )
2019-10-23 21:28:31 (2184212): Status Report: Elapsed Time: '6000.000000'
2019-10-23 21:28:31 (2184212): Status Report: CPU Time: '22809.540000'
2019-10-23 23:07:32 (2184212): Status Report: Elapsed Time: '12000.000000'
2019-10-23 23:07:32 (2184212): Status Report: CPU Time: '46556.710000'
2019-10-24 00:46:32 (2184212): Status Report: Elapsed Time: '18000.000000'
2019-10-24 00:46:32 (2184212): Status Report: CPU Time: '70307.180000'
2019-10-24 01:19:55 (2184212): Guest Log:  *** Job finished ***
2019-10-24 01:19:55 (2184212): Guest Log:  *** The last 20 lines of the pilot log: ***
2019-10-24 01:19:55 (2184212): Guest Log: -rw-------.  1 atlas atlas 11357 Jul 25 14:38 LICENSE
2019-10-24 01:19:55 (2184212): Guest Log: -rw-------.  1 atlas atlas    20 Sep  9 11:04 MANIFEST.IN
2019-10-24 01:19:55 (2184212): Guest Log: -rw-------.  1 atlas atlas    11 Oct 23 17:49 pandaIDs.out
2019-10-24 01:19:55 (2184212): Guest Log: drwx------. 14 atlas atlas   216 Oct 23 17:49 pilot
2019-10-24 01:19:55 (2184212): Guest Log: -rwx------.  1 atlas atlas 20591 Oct 21 09:01 pilot.py
2019-10-24 01:19:55 (2184212): Guest Log: -rw-------.  1 atlas atlas     7 Oct 22 15:22 PILOTVERSION
2019-10-24 01:19:55 (2184212): Guest Log: -rw-------.  1 atlas atlas  2251 Jul 25 14:38 README.md
2019-10-24 01:19:55 (2184212): Guest Log: -rw-------.  1 atlas atlas   766 Oct 10 14:01 setup.py
2019-10-24 01:19:55 (2184212): Guest Log: -rw-------.  1 atlas atlas   221 Jul 25 14:38 TODO.md
2019-10-24 01:19:55 (2184212): Guest Log: 2019-10-23 23:19:54 UTC [wrapper] pandaIDs.out files:
2019-10-24 01:19:55 (2184212): Guest Log: -rw-------. 1 atlas atlas 11 Oct 23 17:49 /home/atlas/RunAtlas/pilot2/pandaIDs.out
2019-10-24 01:19:55 (2184212): Guest Log: 2019-10-23 23:19:54 UTC [wrapper] pandaIDs.out content:
2019-10-24 01:19:55 (2184212): Guest Log: 4515897712
2019-10-24 01:19:55 (2184212): Guest Log: 2019-10-23 23:19:54 UTC [wrapper] Test setup, not cleaning
2019-10-24 01:19:55 (2184212): Guest Log: 2019-10-23 23:19:54 UTC [wrapper] ==== wrapper stdout END ====
2019-10-24 01:19:55 (2184212): Guest Log: 2019-10-23 23:19:54 UTC [wrapper] ==== wrapper stderr END ====
2019-10-24 01:19:55 (2184212): Guest Log: 2019-10-23 23:19:54 UTC [wrapper] wrapper wrapperexiting ec=0, duration=19811
2019-10-24 01:19:55 (2184212): Guest Log: 2019-10-23 23:19:54 UTC [wrapper] apfmon messages muted
2019-10-24 01:19:55 (2184212): Guest Log:  *** Error codes and diagnostics ***
2019-10-24 01:19:55 (2184212): Guest Log:     "exeErrorCode": 0,
2019-10-24 01:19:55 (2184212): Guest Log:     "exeErrorDiag": "",
2019-10-24 01:19:55 (2184212): Guest Log:     "pilotErrorCode": 0,
2019-10-24 01:19:55 (2184212): Guest Log:     "pilotErrorDiag": "",
2019-10-24 01:19:55 (2184212): Guest Log:  *** Listing of results directory ***
2019-10-24 01:19:55 (2184212): Guest Log: total 253936
2019-10-24 01:19:55 (2184212): Guest Log: -rw-r--r--. 1 atlas atlas    260992 Oct 23 11:35 pilot2.tar.gz
2019-10-24 01:19:55 (2184212): Guest Log: -rwx------. 1 atlas atlas     12849 Oct 23 11:56 runpilot2-wrapper.sh
2019-10-24 01:19:55 (2184212): Guest Log: -rw-r--r--. 1 atlas atlas      4480 Oct 23 11:56 queuedata.json
2019-10-24 01:19:55 (2184212): Guest Log: -rw-------. 1 atlas atlas      2868 Oct 23 11:56 pandaJobData.out
2019-10-24 01:19:55 (2184212): Guest Log: -rw-r--r--. 1 atlas atlas    268653 Oct 23 17:49 input.tar.gz
2019-10-24 01:19:55 (2184212): Guest Log: -rw-r--r--. 1 atlas atlas       815 Oct 23 17:49 RTE.tar.gz
2019-10-24 01:19:55 (2184212): Guest Log: -rw-r--r--. 1 atlas atlas      8659 Oct 23 17:49 start_atlas.sh
2019-10-24 01:19:55 (2184212): Guest Log: -rw-r--r--. 1 atlas atlas      6252 Oct 23 17:49 init_data.xml
2019-10-24 01:19:55 (2184212): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 23 17:49 EVNT.18605582._000446.pool.root.1 -> /data/./ATLAS.root_0
2019-10-24 01:19:55 (2184212): Guest Log: drwxr-xr-x. 3 atlas atlas        17 Oct 23 17:49 APPS
2019-10-24 01:19:55 (2184212): Guest Log: -rw-------. 1 atlas atlas   3853712 Oct 23 17:49 agis_schedconf.cvmfs.json
2019-10-24 01:19:55 (2184212): Guest Log: -rw-------. 1 atlas atlas   7670289 Oct 23 17:49 agis_ddmendpoints.json
2019-10-24 01:19:55 (2184212): Guest Log: drwx------. 3 atlas atlas       229 Oct 23 17:49 pilot2
2019-10-24 01:19:55 (2184212): Guest Log: -rw-------. 1 atlas atlas 243823955 Oct 23 23:18 HITS.19000550._026069.pool.root.1
2019-10-24 01:19:55 (2184212): Guest Log: -rw-------. 1 atlas atlas       788 Oct 23 23:19 memory_monitor_summary.json
2019-10-24 01:19:55 (2184212): Guest Log: -rw-------. 1 atlas atlas    881213 Oct 23 23:19 log.19000550._026069.job.log.tgz.1
2019-10-24 01:19:55 (2184212): Guest Log: -rw-------. 1 atlas atlas     82355 Oct 23 23:19 heartbeat.json
2019-10-24 01:19:55 (2184212): Guest Log: -rw-------. 1 atlas atlas      8337 Oct 23 23:19 pilotlog.txt
2019-10-24 01:19:55 (2184212): Guest Log: -rw-------. 1 atlas atlas   1051233 Oct 23 23:19 log.19000550._026069.job.log.1
2019-10-24 01:19:55 (2184212): Guest Log: -rw-------. 1 atlas atlas       515 Oct 23 23:19 c4rNDmMQUhvnShfckohDCDFpABFKDmABFKDmp0qODmABFKDm7Q7Gen.diag
2019-10-24 01:19:55 (2184212): Guest Log: -rw-r--r--. 1 atlas atlas      6785 Oct 23 23:19 runtime_log.err
2019-10-24 01:19:55 (2184212): Guest Log: -rw-------. 1 atlas atlas       463 Oct 23 23:19 output.list
2019-10-24 01:19:55 (2184212): Guest Log: -rw-r--r--. 1 atlas atlas       692 Oct 23 23:19 runtime_log
2019-10-24 01:19:55 (2184212): Guest Log: -rw-------. 1 atlas atlas   2027520 Oct 23 23:19 result.tar.gz
2019-10-24 01:19:55 (2184212): Guest Log: Looking for outputfile HITS.19000550._026069.pool.root.1
2019-10-24 01:19:55 (2184212): Guest Log: HITS file was successfully produced
2019-10-24 01:19:55 (2184212): Guest Log: -rw-------. 1 atlas atlas 243823955 Oct 23 23:18 /home/atlas/RunAtlas/HITS.19000550._026069.pool.root.1
2019-10-24 01:19:55 (2184212): Guest Log: Successfully finished the ATLAS job!
2019-10-24 01:19:55 (2184212): Guest Log: Copying the results back to the shared directory!
2019-10-24 01:19:55 (2184212): Guest Log:  *** Contents of shared directory: ***
2019-10-24 01:19:55 (2184212): Guest Log: total 460428
2019-10-24 01:19:55 (2184212): Guest Log: -rw-r--r--. 1 root root 225325536 Oct 23 17:49 ATLAS.root_0
2019-10-24 01:19:55 (2184212): Guest Log: -rw-r--r--. 1 root root 243823955 Oct 23 23:18 HITS.pool.root.1
2019-10-24 01:19:55 (2184212): Guest Log: -rw-r--r--. 1 root root      6252 Oct 23 17:49 init_data.xml
2019-10-24 01:19:55 (2184212): Guest Log: -rw-r--r--. 1 root root    268653 Oct 23 17:49 input.tar.gz
2019-10-24 01:19:55 (2184212): Guest Log: -rw-r--r--. 1 root root   2027520 Oct 23  2019 result.tar.gz
2019-10-24 01:19:55 (2184212): Guest Log: -rw-r--r--. 1 root root       815 Oct 23 17:49 RTE.tar.gz
2019-10-24 01:19:55 (2184212): Guest Log: -rw-r--r--. 1 root root      8659 Oct 23 17:49 start_atlas.sh
2019-10-24 01:19:55 (2184212): Guest Log:  *** Success! Shutting down the machine. ***
2019-10-24 01:19:55 (2184212): VM Completion File Detected.
2019-10-24 01:19:55 (2184212): Powering off VM.
2019-10-24 01:19:56 (2184212): Successfully stopped VM.
2019-10-24 01:19:56 (2184212): Deregistering VM. (boinc_1048cb6851cf2146, slot#0)
2019-10-24 01:19:56 (2184212): Removing network bandwidth throttle group from VM.
2019-10-24 01:19:56 (2184212): Removing storage controller(s) from VM.
2019-10-24 01:19:56 (2184212): Removing VM from VirtualBox.
2019-10-24 01:19:56 (2184212): Removing virtual disk drive from VirtualBox.
01:20:01 (2184212): called boinc_finish(0)

</stderr_txt>
]]>


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