Name 8XfNDmZfIuvnShfckohDCDFpABFKDmABFKDm4eKSDmABFKDmi2xH4n_0
Workunit 1954495
Created 27 Nov 2019, 20:00:54 UTC
Sent 2 Dec 2019, 0:45:25 UTC
Report deadline 9 Dec 2019, 0:45:25 UTC
Received 2 Dec 2019, 11:38:39 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 3959
Run time 40 min 13 sec
CPU time 1 hours 17 min 7 sec
Validate state Valid
Credit 20.47
Device peak FLOPS 2.58 GFLOPS
Application version ATLAS Simulation v0.84 (vbox64_mt_mcore_atlas)
x86_64-pc-linux-gnu
Peak working set size 223.91 MB
Peak swap size 10.63 GB
Peak disk usage 3.68 GB

Stderr output

<core_client_version>7.6.31</core_client_version>
<![CDATA[
<stderr_txt>
2019-12-02 03:57:42 (21918): vboxwrapper (7.7.26197): starting
2019-12-02 03:57:42 (21918): Feature: Checkpoint interval offset (269 seconds)
2019-12-02 03:57:42 (21918): Detected: VirtualBox VboxManage Interface (Version: 5.1.30)
2019-12-02 03:57:42 (21918): Detected: Minimum checkpoint interval (900.000000 seconds)
2019-12-02 03:57:42 (21918): Successfully copied 'init_data.xml' to the shared directory.
2019-12-02 03:57:42 (21918): Create VM. (boinc_a5624abf40ccc938, slot#0)
2019-12-02 03:57:43 (21918): Setting Memory Size for VM. (10200MB)
2019-12-02 03:57:43 (21918): Setting CPU Count for VM. (8)
2019-12-02 03:57:43 (21918): Setting Chipset Options for VM.
2019-12-02 03:57:43 (21918): Setting Boot Options for VM.
2019-12-02 03:57:43 (21918): Setting Network Configuration for NAT.
2019-12-02 03:57:43 (21918): Enabling VM Network Access.
2019-12-02 03:57:43 (21918): Disabling USB Support for VM.
2019-12-02 03:57:43 (21918): Disabling COM Port Support for VM.
2019-12-02 03:57:43 (21918): Disabling LPT Port Support for VM.
2019-12-02 03:57:43 (21918): Disabling Audio Support for VM.
2019-12-02 03:57:43 (21918): Disabling Clipboard Support for VM.
2019-12-02 03:57:43 (21918): Disabling Drag and Drop Support for VM.
2019-12-02 03:57:44 (21918): Adding storage controller(s) to VM.
2019-12-02 03:57:44 (21918): Adding virtual disk drive to VM. (vm_image.vdi)
2019-12-02 03:57:44 (21918): Adding VirtualBox Guest Additions to VM.
2019-12-02 03:57:44 (21918): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2019-12-02 03:57:44 (21918): forwarding host port 54725 to guest port 80
2019-12-02 03:57:44 (21918): Enabling remote desktop for VM.
2019-12-02 03:57:44 (21918): Enabling shared directory for VM.
2019-12-02 03:57:44 (21918): Starting VM. (boinc_a5624abf40ccc938, slot#0)
2019-12-02 03:57:46 (21918): Successfully started VM. (PID = '22483')
2019-12-02 03:57:46 (21918): Reporting VM Process ID to BOINC.
2019-12-02 03:57:46 (21918): Guest Log: BIOS: VirtualBox 5.1.30
2019-12-02 03:57:46 (21918): Guest Log: BIOS: ata0-0: PCHS=16383/16/63 LCHS=1024/255/63
2019-12-02 03:57:46 (21918): VM state change detected. (old = 'poweroff', new = 'running')
2019-12-02 03:57:46 (21918): Detected: Web Application Enabled (http://localhost:54725)
2019-12-02 03:57:46 (21918): Detected: Remote Desktop Enabled (localhost:56587)
2019-12-02 03:57:46 (21918): Preference change detected
2019-12-02 03:57:46 (21918): Setting CPU throttle for VM. (100%)
2019-12-02 03:57:46 (21918): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 300 seconds) or (Vbox_job.xml: 900 seconds))
2019-12-02 03:57:48 (21918): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2019-12-02 03:57:48 (21918): Guest Log: BIOS: Booting from Hard Disk...
2019-12-02 03:57:50 (21918): Guest Log: BIOS: KBD: unsupported int 16h function 03
2019-12-02 03:57:50 (21918): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2019-12-02 03:57:50 (21918): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2019-12-02 03:57:50 (21918): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2019-12-02 03:57:50 (21918): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2019-12-02 03:57:50 (21918): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2019-12-02 03:57:50 (21918): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2019-12-02 03:57:50 (21918): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2019-12-02 03:57:50 (21918): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2019-12-02 03:57:50 (21918): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2019-12-02 03:57:50 (21918): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2019-12-02 03:57:50 (21918): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2019-12-02 03:57:50 (21918): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2019-12-02 03:57:50 (21918): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2019-12-02 03:57:50 (21918): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2019-12-02 03:57:50 (21918): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2019-12-02 03:57:50 (21918): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2019-12-02 03:57:50 (21918): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2019-12-02 03:57:50 (21918): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2019-12-02 03:57:50 (21918): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2019-12-02 03:57:50 (21918): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2019-12-02 03:57:50 (21918): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2019-12-02 03:57:50 (21918): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2019-12-02 03:57:50 (21918): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2019-12-02 03:57:50 (21918): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2019-12-02 03:57:50 (21918): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2019-12-02 03:57:50 (21918): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2019-12-02 03:57:50 (21918): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2019-12-02 03:57:50 (21918): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2019-12-02 03:57:50 (21918): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2019-12-02 03:57:50 (21918): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2019-12-02 03:57:50 (21918): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2019-12-02 03:58:05 (21918): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2019-12-02 03:58:05 (21918): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2019-12-02 03:58:07 (21918): Guest Log: Checking CVMFS...
2019-12-02 03:58:11 (21918): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2019-12-02 03:58:11 (21918): Guest Log: 00:00:00.000287 main     Log opened 2019-12-02T03:58:10.451673000Z
2019-12-02 03:58:11 (21918): Guest Log: 00:00:00.000425 main     OS Product: Linux
2019-12-02 03:58:11 (21918): Guest Log: 00:00:00.000509 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2019-12-02 03:58:11 (21918): Guest Log: 00:00:00.000550 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2019-12-02 03:58:11 (21918): Guest Log: 00:00:00.000585 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2019-12-02 03:58:11 (21918): Guest Log: 00:00:00.000587 main     Process ID: 1742
2019-12-02 03:58:11 (21918): Guest Log: 00:00:00.000587 main     Package type: LINUX_64BITS_GENERIC
2019-12-02 03:58:11 (21918): Guest Log: 00:00:00.002095 main     5.2.32 r132073 started. Verbose level = 0
2019-12-02 03:58:11 (21918): Guest Log: 00:00:00.003487 main     Error: Service 'control' failed to initialize: VERR_INVALID_PARAMETER
2019-12-02 03:58:11 (21918): Guest Log: 00:00:00.003666 main     Session 0 is about to close ...
2019-12-02 03:58:11 (21918): Guest Log: 00:00:00.003713 main     Stopping all guest processes ...
2019-12-02 03:58:11 (21918): Guest Log: 00:00:00.003758 main     Closing all guest files ...
2019-12-02 03:58:11 (21918): Guest Log: 00:00:00.003902 main     Ended.
2019-12-02 03:58:26 (21918): Guest Log: CVMFS is ok
2019-12-02 03:58:28 (21918): Guest Log: Mounting shared directory
2019-12-02 03:58:28 (21918): Guest Log: Copying input files
2019-12-02 03:58:29 (21918): Guest Log: Copied input files into RunAtlas.
2019-12-02 03:58:29 (21918): Guest Log: copied the webapp to /var/www
2019-12-02 03:58:30 (21918): Guest Log: This vm does not need to setup an http proxy
2019-12-02 03:58:30 (21918): Guest Log: ATHENA_PROC_NUMBER=8
2019-12-02 03:58:33 (21918): Guest Log:  *** Starting ATLAS job. (PandaID=4002876565 taskID=000649-3) ***
2019-12-02 04:37:48 (21918): Guest Log:  *** Job finished ***
2019-12-02 04:37:48 (21918): Guest Log:  *** The last 20 lines of the pilot log: ***
2019-12-02 04:37:48 (21918): Guest Log: 2019-12-02 04:37:47 UTC [wrapper] apfmon messages muted
2019-12-02 04:37:48 (21918): Guest Log: ---- find pandaID.out ----
2019-12-02 04:37:48 (21918): Guest Log: total 56
2019-12-02 04:37:48 (21918): Guest Log: -rw-------.  1 atlas atlas 11357 Jul 25 14:38 LICENSE
2019-12-02 04:37:48 (21918): Guest Log: -rw-------.  1 atlas atlas    20 Sep  9 11:04 MANIFEST.IN
2019-12-02 04:37:48 (21918): Guest Log: -rw-------.  1 atlas atlas    11 Dec  2 03:59 pandaIDs.out
2019-12-02 04:37:48 (21918): Guest Log: drwx------. 14 atlas atlas   216 Dec  2 03:59 pilot
2019-12-02 04:37:48 (21918): Guest Log: -rwx------.  1 atlas atlas 20347 Nov 14 10:01 pilot.py
2019-12-02 04:37:48 (21918): Guest Log: -rw-------.  1 atlas atlas     7 Nov 14 18:03 PILOTVERSION
2019-12-02 04:37:48 (21918): Guest Log: -rw-------.  1 atlas atlas  2212 Nov 14 10:01 README.md
2019-12-02 04:37:48 (21918): Guest Log: -rw-------.  1 atlas atlas   766 Oct 10 14:01 setup.py
2019-12-02 04:37:48 (21918): Guest Log: -rw-------.  1 atlas atlas   221 Jul 25 14:38 TODO.md
2019-12-02 04:37:48 (21918): Guest Log: -rw-------. 1 atlas atlas 11 Dec  2 03:59 /home/atlas/RunAtlas/pilot2/pandaIDs.out
2019-12-02 04:37:48 (21918): Guest Log: 4002876565
2019-12-02 04:37:48 (21918): Guest Log: 2019-12-02 04:37:47 UTC [wrapper] Test setup, not cleaning
2019-12-02 04:37:48 (21918): Guest Log: 2019-12-02 04:37:47 UTC [wrapper] ==== wrapper stdout END ====
2019-12-02 04:37:48 (21918): Guest Log: 2019-12-02 04:37:47 UTC [wrapper] ==== wrapper stderr END ====
2019-12-02 04:37:48 (21918): Guest Log: 2019-12-02 04:37:47 UTC [wrapper] wrapper wrapperexiting ec=0, duration=2355
2019-12-02 04:37:48 (21918): Guest Log: 2019-12-02 04:37:47 UTC [wrapper] apfmon messages muted
2019-12-02 04:37:48 (21918): Guest Log:  *** Error codes and diagnostics ***
2019-12-02 04:37:48 (21918): Guest Log:     "exeErrorCode": 0,
2019-12-02 04:37:48 (21918): Guest Log:     "exeErrorDiag": "",
2019-12-02 04:37:48 (21918): Guest Log:     "pilotErrorCode": 0,
2019-12-02 04:37:48 (21918): Guest Log:     "pilotErrorDiag": "",
2019-12-02 04:37:48 (21918): Guest Log:  *** Listing of results directory ***
2019-12-02 04:37:48 (21918): Guest Log: total 23524
2019-12-02 04:37:48 (21918): Guest Log: -rw-r--r--. 1 atlas atlas  264849 Nov 27 19:25 pilot2.tar.gz
2019-12-02 04:37:48 (21918): Guest Log: -rw-r--r--. 1 atlas atlas    4480 Nov 27 20:00 queuedata.json
2019-12-02 04:37:48 (21918): Guest Log: -rwx------. 1 atlas atlas   12641 Nov 27 20:00 runpilot2-wrapper.sh
2019-12-02 04:37:48 (21918): Guest Log: -rw-------. 1 atlas atlas    2958 Nov 27 20:00 pandaJobData.out
2019-12-02 04:37:48 (21918): Guest Log: -rw-r--r--. 1 atlas atlas    8505 Dec  2 03:58 start_atlas.sh
2019-12-02 04:37:48 (21918): Guest Log: -rw-r--r--. 1 atlas atlas     815 Dec  2 03:58 RTE.tar.gz
2019-12-02 04:37:48 (21918): Guest Log: -rw-r--r--. 1 atlas atlas  272824 Dec  2 03:58 input.tar.gz
2019-12-02 04:37:48 (21918): Guest Log: -rw-r--r--. 1 atlas atlas    8416 Dec  2 03:58 init_data.xml
2019-12-02 04:37:48 (21918): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Dec  2 03:58 EVNT.14296418._001447.pool.root.1 -> /data/./ATLAS.root_0
2019-12-02 04:37:48 (21918): Guest Log: drwxr-xr-x. 3 atlas atlas      17 Dec  2 03:58 APPS
2019-12-02 04:37:48 (21918): Guest Log: -rw-------. 1 atlas atlas 3759528 Dec  2 03:59 agis_schedconf.cvmfs.json
2019-12-02 04:37:48 (21918): Guest Log: -rw-------. 1 atlas atlas 7756861 Dec  2 03:59 agis_ddmendpoints.json
2019-12-02 04:37:48 (21918): Guest Log: drwx------. 3 atlas atlas     229 Dec  2 03:59 pilot2
2019-12-02 04:37:48 (21918): Guest Log: -rw-------. 1 atlas atlas 9091346 Dec  2 04:36 HITS.000649-3171986-14139._078090.pool.root.1
2019-12-02 04:37:48 (21918): Guest Log: -rw-------. 1 atlas atlas     784 Dec  2 04:37 memory_monitor_summary.json
2019-12-02 04:37:48 (21918): Guest Log: -rw-------. 1 atlas atlas 1173600 Dec  2 04:37 log.000649-3171986-14139._078090.job.log.tgz.1
2019-12-02 04:37:48 (21918): Guest Log: -rw-------. 1 atlas atlas   11003 Dec  2 04:37 heartbeat.json
2019-12-02 04:37:48 (21918): Guest Log: -rw-------. 1 atlas atlas    8732 Dec  2 04:37 pilotlog.txt
2019-12-02 04:37:48 (21918): Guest Log: -rw-------. 1 atlas atlas  227580 Dec  2 04:37 log.14568781._078090.job.log.1
2019-12-02 04:37:48 (21918): Guest Log: -rw-------. 1 atlas atlas     491 Dec  2 04:37 8XfNDmZfIuvnShfckohDCDFpABFKDmABFKDm4eKSDmABFKDmi2xH4n.diag
2019-12-02 04:37:48 (21918): Guest Log: -rw-r--r--. 1 atlas atlas    6873 Dec  2 04:37 runtime_log.err
2019-12-02 04:37:48 (21918): Guest Log: -rw-------. 1 atlas atlas     499 Dec  2 04:37 output.list
2019-12-02 04:37:48 (21918): Guest Log: -rw-r--r--. 1 atlas atlas     718 Dec  2 04:37 runtime_log
2019-12-02 04:37:48 (21918): Guest Log: -rw-------. 1 atlas atlas 1423360 Dec  2 04:37 result.tar.gz
2019-12-02 04:37:48 (21918): Guest Log: Looking for outputfile HITS.000649-3171986-14139._078090.pool.root.1
2019-12-02 04:37:48 (21918): Guest Log: HITS file was successfully produced
2019-12-02 04:37:48 (21918): Guest Log: -rw-------. 1 atlas atlas 9091346 Dec  2 04:36 /home/atlas/RunAtlas/HITS.000649-3171986-14139._078090.pool.root.1
2019-12-02 04:37:48 (21918): Guest Log: Successfully finished the ATLAS job!
2019-12-02 04:37:48 (21918): Guest Log: Copying the results back to the shared directory!
2019-12-02 04:37:48 (21918): Guest Log:  *** Contents of shared directory: ***
2019-12-02 04:37:48 (21918): Guest Log: total 367260
2019-12-02 04:37:48 (21918): Guest Log: -rw-r--r--. 1 root root 365251149 Dec  2  2019 ATLAS.root_0
2019-12-02 04:37:48 (21918): Guest Log: -rw-r--r--. 1 root root   9091346 Dec  2 04:36 HITS.pool.root.1
2019-12-02 04:37:48 (21918): Guest Log: -rw-r--r--. 1 root root      8416 Dec  2  2019 init_data.xml
2019-12-02 04:37:48 (21918): Guest Log: -rw-r--r--. 1 root root    272824 Dec  2  2019 input.tar.gz
2019-12-02 04:37:48 (21918): Guest Log: -rw-r--r--. 1 root root   1423360 Dec  2  2019 result.tar.gz
2019-12-02 04:37:48 (21918): Guest Log: -rw-r--r--. 1 root root       815 Dec  2  2019 RTE.tar.gz
2019-12-02 04:37:48 (21918): Guest Log: -rw-r--r--. 1 root root      8505 Dec  2  2019 start_atlas.sh
2019-12-02 04:37:48 (21918): Guest Log:  *** Success! Shutting down the machine. ***
2019-12-02 04:37:48 (21918): VM Completion File Detected.
2019-12-02 04:37:48 (21918): Powering off VM.
2019-12-02 04:37:49 (21918): Successfully stopped VM.
2019-12-02 04:37:49 (21918): Deregistering VM. (boinc_a5624abf40ccc938, slot#0)
2019-12-02 04:37:49 (21918): Removing network bandwidth throttle group from VM.
2019-12-02 04:37:49 (21918): Removing storage controller(s) from VM.
2019-12-02 04:37:49 (21918): Removing VM from VirtualBox.
2019-12-02 04:37:49 (21918): Removing virtual disk drive from VirtualBox.
04:37:55 (21918): called boinc_finish(0)

</stderr_txt>
]]>


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