Name 7cPNDmtoMwvn9Rq4apoT9bVoABFKDmABFKDmPTIWDmABFKDmz6j1Kn_0
Workunit 1956176
Created 3 Dec 2019, 12:50:58 UTC
Sent 3 Dec 2019, 14:30:33 UTC
Report deadline 10 Dec 2019, 14:30:33 UTC
Received 4 Dec 2019, 11:05:31 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 3959
Run time 3 hours 56 min 37 sec
CPU time 22 hours 54 min 50 sec
Validate state Valid
Credit 2,153.39
Device peak FLOPS 21.70 GFLOPS
Application version ATLAS Simulation v0.84 (vbox64_mt_mcore_atlas)
x86_64-pc-linux-gnu
Peak working set size 9.30 GB
Peak swap size 11.81 GB
Peak disk usage 3.77 GB

Stderr output

<core_client_version>7.6.31</core_client_version>
<![CDATA[
<stderr_txt>
2019-12-04 00:05:46 (31537): vboxwrapper (7.7.26197): starting
2019-12-04 00:05:46 (31537): Feature: Checkpoint interval offset (121 seconds)
2019-12-04 00:05:46 (31537): Detected: VirtualBox VboxManage Interface (Version: 5.1.30)
2019-12-04 00:05:46 (31537): Detected: Minimum checkpoint interval (900.000000 seconds)
2019-12-04 00:05:46 (31537): Successfully copied 'init_data.xml' to the shared directory.
2019-12-04 00:05:46 (31537): Create VM. (boinc_e01281164929a462, slot#5)
2019-12-04 00:05:47 (31537): Setting Memory Size for VM. (10200MB)
2019-12-04 00:05:47 (31537): Setting CPU Count for VM. (8)
2019-12-04 00:05:47 (31537): Setting Chipset Options for VM.
2019-12-04 00:05:47 (31537): Setting Boot Options for VM.
2019-12-04 00:05:47 (31537): Setting Network Configuration for NAT.
2019-12-04 00:05:47 (31537): Enabling VM Network Access.
2019-12-04 00:05:47 (31537): Disabling USB Support for VM.
2019-12-04 00:05:47 (31537): Disabling COM Port Support for VM.
2019-12-04 00:05:47 (31537): Disabling LPT Port Support for VM.
2019-12-04 00:05:48 (31537): Disabling Audio Support for VM.
2019-12-04 00:05:48 (31537): Disabling Clipboard Support for VM.
2019-12-04 00:05:48 (31537): Disabling Drag and Drop Support for VM.
2019-12-04 00:05:48 (31537): Adding storage controller(s) to VM.
2019-12-04 00:05:48 (31537): Adding virtual disk drive to VM. (vm_image.vdi)
2019-12-04 00:05:48 (31537): Adding VirtualBox Guest Additions to VM.
2019-12-04 00:05:48 (31537): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2019-12-04 00:05:48 (31537): forwarding host port 40625 to guest port 80
2019-12-04 00:05:48 (31537): Enabling remote desktop for VM.
2019-12-04 00:05:49 (31537): Enabling shared directory for VM.
2019-12-04 00:05:49 (31537): Starting VM. (boinc_e01281164929a462, slot#5)
2019-12-04 00:05:50 (31537): Successfully started VM. (PID = '32272')
2019-12-04 00:05:50 (31537): Reporting VM Process ID to BOINC.
2019-12-04 00:05:50 (31537): Guest Log: BIOS: VirtualBox 5.1.30
2019-12-04 00:05:50 (31537): Guest Log: BIOS: ata0-0: PCHS=16383/16/63 LCHS=1024/255/63
2019-12-04 00:05:50 (31537): VM state change detected. (old = 'poweroff', new = 'running')
2019-12-04 00:05:50 (31537): Detected: Web Application Enabled (http://localhost:40625)
2019-12-04 00:05:50 (31537): Detected: Remote Desktop Enabled (localhost:53797)
2019-12-04 00:05:51 (31537): Preference change detected
2019-12-04 00:05:51 (31537): Setting CPU throttle for VM. (100%)
2019-12-04 00:05:53 (31537): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 300 seconds) or (Vbox_job.xml: 900 seconds))
2019-12-04 00:05:54 (31537): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2019-12-04 00:05:54 (31537): Guest Log: BIOS: Booting from Hard Disk...
2019-12-04 00:05:55 (31537): Guest Log: BIOS: KBD: unsupported int 16h function 03
2019-12-04 00:05:55 (31537): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2019-12-04 00:05:55 (31537): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2019-12-04 00:05:55 (31537): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2019-12-04 00:05:55 (31537): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2019-12-04 00:05:55 (31537): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2019-12-04 00:05:55 (31537): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2019-12-04 00:05:55 (31537): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2019-12-04 00:05:55 (31537): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2019-12-04 00:05:55 (31537): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2019-12-04 00:05:55 (31537): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2019-12-04 00:05:55 (31537): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2019-12-04 00:05:55 (31537): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2019-12-04 00:05:55 (31537): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2019-12-04 00:05:55 (31537): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2019-12-04 00:05:55 (31537): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2019-12-04 00:05:55 (31537): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2019-12-04 00:05:55 (31537): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2019-12-04 00:05:55 (31537): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2019-12-04 00:05:55 (31537): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2019-12-04 00:05:55 (31537): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2019-12-04 00:05:55 (31537): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2019-12-04 00:05:55 (31537): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2019-12-04 00:05:55 (31537): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2019-12-04 00:05:55 (31537): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2019-12-04 00:05:55 (31537): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2019-12-04 00:05:55 (31537): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2019-12-04 00:05:55 (31537): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2019-12-04 00:05:55 (31537): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2019-12-04 00:05:55 (31537): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2019-12-04 00:05:55 (31537): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2019-12-04 00:05:55 (31537): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2019-12-04 00:06:00 (31537): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2019-12-04 00:06:00 (31537): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2019-12-04 00:06:03 (31537): Guest Log: Checking CVMFS...
2019-12-04 00:06:07 (31537): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2019-12-04 00:06:07 (31537): Guest Log: 00:00:00.000395 main     Log opened 2019-12-04T00:06:05.161753000Z
2019-12-04 00:06:07 (31537): Guest Log: 00:00:00.000759 main     OS Product: Linux
2019-12-04 00:06:07 (31537): Guest Log: 00:00:00.000831 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2019-12-04 00:06:07 (31537): Guest Log: 00:00:00.000893 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2019-12-04 00:06:07 (31537): Guest Log: 00:00:00.000955 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2019-12-04 00:06:07 (31537): Guest Log: 00:00:00.000957 main     Process ID: 1768
2019-12-04 00:06:07 (31537): Guest Log: 00:00:00.000958 main     Package type: LINUX_64BITS_GENERIC
2019-12-04 00:06:07 (31537): Guest Log: 00:00:00.003329 main     5.2.32 r132073 started. Verbose level = 0
2019-12-04 00:06:07 (31537): Guest Log: 00:00:00.004818 main     Error: Service 'control' failed to initialize: VERR_INVALID_PARAMETER
2019-12-04 00:06:07 (31537): Guest Log: 00:00:00.005053 main     Session 0 is about to close ...
2019-12-04 00:06:07 (31537): Guest Log: 00:00:00.005113 main     Stopping all guest processes ...
2019-12-04 00:06:07 (31537): Guest Log: 00:00:00.005170 main     Closing all guest files ...
2019-12-04 00:06:07 (31537): Guest Log: 00:00:00.005408 main     Ended.
2019-12-04 00:06:19 (31537): Guest Log: CVMFS is ok
2019-12-04 00:06:20 (31537): Guest Log: Mounting shared directory
2019-12-04 00:06:20 (31537): Guest Log: Copying input files
2019-12-04 00:06:21 (31537): Guest Log: Copied input files into RunAtlas.
2019-12-04 00:06:22 (31537): Guest Log: copied the webapp to /var/www
2019-12-04 00:06:22 (31537): Guest Log: This vm does not need to setup an http proxy
2019-12-04 00:06:22 (31537): Guest Log: ATHENA_PROC_NUMBER=8
2019-12-04 00:06:23 (31537): Guest Log:  *** Starting ATLAS job. (PandaID=4566668676 taskID=19782798) ***
2019-12-04 01:44:54 (31537): Status Report: Elapsed Time: '6000.210414'
2019-12-04 01:44:54 (31537): Status Report: CPU Time: '32997.770000'
2019-12-04 03:23:58 (31537): Status Report: Elapsed Time: '12000.734226'
2019-12-04 03:23:58 (31537): Status Report: CPU Time: '71617.980000'
2019-12-04 04:02:14 (31537): Guest Log:  *** Job finished ***
2019-12-04 04:02:14 (31537): Guest Log:  *** The last 20 lines of the pilot log: ***
2019-12-04 04:02:14 (31537): Guest Log: -rw-------.  1 atlas atlas 11357 Jul 25 14:38 LICENSE
2019-12-04 04:02:14 (31537): Guest Log: -rw-------.  1 atlas atlas    20 Sep  9 11:04 MANIFEST.IN
2019-12-04 04:02:14 (31537): Guest Log: -rw-------.  1 atlas atlas    11 Dec  4 00:06 pandaIDs.out
2019-12-04 04:02:14 (31537): Guest Log: drwx------. 14 atlas atlas   216 Dec  4 00:06 pilot
2019-12-04 04:02:14 (31537): Guest Log: -rwx------.  1 atlas atlas 20750 Dec  2 10:02 pilot.py
2019-12-04 04:02:14 (31537): Guest Log: -rw-------.  1 atlas atlas     8 Dec  2 10:02 PILOTVERSION
2019-12-04 04:02:14 (31537): Guest Log: -rw-------.  1 atlas atlas  2212 Nov 14 10:01 README.md
2019-12-04 04:02:14 (31537): Guest Log: -rw-------.  1 atlas atlas   766 Oct 10 14:01 setup.py
2019-12-04 04:02:14 (31537): Guest Log: -rw-------.  1 atlas atlas   221 Jul 25 14:38 TODO.md
2019-12-04 04:02:14 (31537): Guest Log: 2019-12-04 04:02:11 UTC [wrapper] pandaIDs.out files:
2019-12-04 04:02:14 (31537): Guest Log: -rw-------. 1 atlas atlas 11 Dec  4 00:06 /home/atlas/RunAtlas/pilot2/pandaIDs.out
2019-12-04 04:02:14 (31537): Guest Log: 2019-12-04 04:02:11 UTC [wrapper] pandaIDs.out content:
2019-12-04 04:02:14 (31537): Guest Log: 4566668676
2019-12-04 04:02:14 (31537): Guest Log: 2019-12-04 04:02:11 UTC [wrapper] Test setup, not cleaning
2019-12-04 04:02:14 (31537): Guest Log: 2019-12-04 04:02:11 UTC [wrapper] ==== wrapper stdout END ====
2019-12-04 04:02:14 (31537): Guest Log: 2019-12-04 04:02:11 UTC [wrapper] ==== wrapper stderr END ====
2019-12-04 04:02:14 (31537): Guest Log: 2019-12-04 04:02:11 UTC [wrapper] wrapper wrapperexiting ec=0, duration=14150
2019-12-04 04:02:14 (31537): Guest Log: 2019-12-04 04:02:11 UTC [wrapper] apfmon messages muted
2019-12-04 04:02:14 (31537): Guest Log:  *** Error codes and diagnostics ***
2019-12-04 04:02:14 (31537): Guest Log:     "exeErrorCode": 0,
2019-12-04 04:02:14 (31537): Guest Log:     "exeErrorDiag": "",
2019-12-04 04:02:14 (31537): Guest Log:     "pilotErrorCode": 0,
2019-12-04 04:02:14 (31537): Guest Log:     "pilotErrorDiag": "",
2019-12-04 04:02:14 (31537): Guest Log:  *** Listing of results directory ***
2019-12-04 04:02:14 (31537): Guest Log: total 129300
2019-12-04 04:02:14 (31537): Guest Log: -rw-r--r--. 1 atlas atlas    266835 Dec  3 12:23 pilot2.tar.gz
2019-12-04 04:02:14 (31537): Guest Log: -rw-r--r--. 1 atlas atlas      4474 Dec  3 12:50 queuedata.json
2019-12-04 04:02:14 (31537): Guest Log: -rwx------. 1 atlas atlas     12849 Dec  3 12:50 runpilot2-wrapper.sh
2019-12-04 04:02:14 (31537): Guest Log: -rw-------. 1 atlas atlas      2895 Dec  3 12:50 pandaJobData.out
2019-12-04 04:02:14 (31537): Guest Log: -rw-r--r--. 1 atlas atlas     15059 Dec  4 00:06 start_atlas.sh
2019-12-04 04:02:14 (31537): Guest Log: -rw-r--r--. 1 atlas atlas       812 Dec  4 00:06 RTE.tar.gz
2019-12-04 04:02:14 (31537): Guest Log: -rw-r--r--. 1 atlas atlas    275112 Dec  4 00:06 input.tar.gz
2019-12-04 04:02:14 (31537): Guest Log: -rw-r--r--. 1 atlas atlas      8418 Dec  4 00:06 init_data.xml
2019-12-04 04:02:14 (31537): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Dec  4 00:06 EVNT.19609546._000861.pool.root.1 -> /data/./ATLAS.root_0
2019-12-04 04:02:14 (31537): Guest Log: drwxr-xr-x. 3 atlas atlas        17 Dec  4 00:06 APPS
2019-12-04 04:02:14 (31537): Guest Log: -rw-------. 1 atlas atlas   3751919 Dec  4 00:06 agis_schedconf.cvmfs.json
2019-12-04 04:02:14 (31537): Guest Log: -rw-------. 1 atlas atlas   7752774 Dec  4 00:06 agis_ddmendpoints.json
2019-12-04 04:02:14 (31537): Guest Log: drwx------. 3 atlas atlas       229 Dec  4 00:06 pilot2
2019-12-04 04:02:14 (31537): Guest Log: -rw-------. 1 atlas atlas 116006699 Dec  4 04:00 HITS.19782798._053728.pool.root.1
2019-12-04 04:02:14 (31537): Guest Log: -rw-------. 1 atlas atlas       845 Dec  4 04:01 memory_monitor_summary.json
2019-12-04 04:02:14 (31537): Guest Log: -rw-------. 1 atlas atlas   1335965 Dec  4 04:01 log.19782798._053728.job.log.tgz.1
2019-12-04 04:02:14 (31537): Guest Log: -rw-------. 1 atlas atlas     61631 Dec  4 04:01 heartbeat.json
2019-12-04 04:02:14 (31537): Guest Log: -rw-------. 1 atlas atlas      9084 Dec  4 04:02 pilotlog.txt
2019-12-04 04:02:14 (31537): Guest Log: -rw-------. 1 atlas atlas    710177 Dec  4 04:02 log.19782798._053728.job.log.1
2019-12-04 04:02:14 (31537): Guest Log: -rw-------. 1 atlas atlas       463 Dec  4 04:02 output.list
2019-12-04 04:02:14 (31537): Guest Log: -rw-r--r--. 1 atlas atlas       692 Dec  4 04:02 runtime_log
2019-12-04 04:02:14 (31537): Guest Log: -rw-------. 1 atlas atlas   2119680 Dec  4 04:02 result.tar.gz
2019-12-04 04:02:14 (31537): Guest Log: -rw-r--r--. 1 atlas atlas      7935 Dec  4 04:02 runtime_log.err
2019-12-04 04:02:14 (31537): Guest Log: -rw-------. 1 atlas atlas       567 Dec  4 04:02 7cPNDmtoMwvn9Rq4apoT9bVoABFKDmABFKDmPTIWDmABFKDmz6j1Kn.diag
2019-12-04 04:02:14 (31537): Guest Log: Looking for outputfile HITS.19782798._053728.pool.root.1
2019-12-04 04:02:14 (31537): Guest Log: HITS file was successfully produced
2019-12-04 04:02:14 (31537): Guest Log: -rw-------. 1 atlas atlas 116006699 Dec  4 04:00 /home/atlas/RunAtlas/HITS.19782798._053728.pool.root.1
2019-12-04 04:02:15 (31537): Guest Log: Successfully finished the ATLAS job!
2019-12-04 04:02:15 (31537): Guest Log: Copying the results back to the shared directory!
2019-12-04 04:02:15 (31537): Guest Log:  *** Contents of shared directory: ***
2019-12-04 04:02:15 (31537): Guest Log: total 335416
2019-12-04 04:02:15 (31537): Guest Log: -rw-r--r--. 1 root root 225020283 Dec  4  2019 ATLAS.root_0
2019-12-04 04:02:15 (31537): Guest Log: -rw-r--r--. 1 root root 116006699 Dec  4 04:00 HITS.pool.root.1
2019-12-04 04:02:15 (31537): Guest Log: -rw-r--r--. 1 root root       812 Dec  4  2019 RTE.tar.gz
2019-12-04 04:02:15 (31537): Guest Log: -rw-r--r--. 1 root root     15059 Dec  4  2019 start_atlas.sh
2019-12-04 04:02:15 (31537): Guest Log:  *** Success! Shutting down the machine. ***
2019-12-04 04:02:15 (31537): VM Completion File Detected.
2019-12-04 04:02:15 (31537): Powering off VM.
2019-12-04 04:02:17 (31537): Successfully stopped VM.
2019-12-04 04:02:17 (31537): Deregistering VM. (boinc_e01281164929a462, slot#5)
2019-12-04 04:02:17 (31537): Removing network bandwidth throttle group from VM.
2019-12-04 04:02:17 (31537): Removing storage controller(s) from VM.
2019-12-04 04:02:17 (31537): Removing VM from VirtualBox.
2019-12-04 04:02:17 (31537): Removing virtual disk drive from VirtualBox.
04:02:22 (31537): called boinc_finish(0)

</stderr_txt>
]]>


©2024 CERN