Task 2842361

Name	i8fLDmtyMwvn9Rq4apoT9bVoABFKDmABFKDmumMWDmABFKDmntlFKm_0
Workunit	1956248
Created	3 Dec 2019, 13:01:19 UTC
Sent	4 Dec 2019, 11:00:50 UTC
Report deadline	11 Dec 2019, 11:00:50 UTC
Received	4 Dec 2019, 20:45:46 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	3959
Run time	3 hours 32 min 5 sec
CPU time	20 hours 47 min 10 sec
Validate state	Valid
Credit	1,264.36
Device peak FLOPS	21.70 GFLOPS
Application version	ATLAS Simulation v0.84 (vbox64_mt_mcore_atlas) x86_64-pc-linux-gnu
Peak working set size	709.81 MB
Peak swap size	10.42 GB
Peak disk usage	3.66 GB
Stderr output

<core_client_version>7.6.31</core_client_version>
<![CDATA[
<stderr_txt>
2019-12-04 10:11:58 (23614): vboxwrapper (7.7.26197): starting
2019-12-04 10:11:58 (23614): Feature: Checkpoint interval offset (453 seconds)
2019-12-04 10:11:58 (23614): Detected: VirtualBox VboxManage Interface (Version: 5.1.30)
2019-12-04 10:11:58 (23614): Detected: Minimum checkpoint interval (900.000000 seconds)
2019-12-04 10:11:58 (23614): Successfully copied 'init_data.xml' to the shared directory.
2019-12-04 10:11:59 (23614): Create VM. (boinc_534500489dcfd3cd, slot#3)
2019-12-04 10:11:59 (23614): Setting Memory Size for VM. (10200MB)
2019-12-04 10:11:59 (23614): Setting CPU Count for VM. (8)
2019-12-04 10:11:59 (23614): Setting Chipset Options for VM.
2019-12-04 10:11:59 (23614): Setting Boot Options for VM.
2019-12-04 10:11:59 (23614): Setting Network Configuration for NAT.
2019-12-04 10:11:59 (23614): Enabling VM Network Access.
2019-12-04 10:12:00 (23614): Disabling USB Support for VM.
2019-12-04 10:12:00 (23614): Disabling COM Port Support for VM.
2019-12-04 10:12:00 (23614): Disabling LPT Port Support for VM.
2019-12-04 10:12:00 (23614): Disabling Audio Support for VM.
2019-12-04 10:12:00 (23614): Disabling Clipboard Support for VM.
2019-12-04 10:12:00 (23614): Disabling Drag and Drop Support for VM.
2019-12-04 10:12:00 (23614): Adding storage controller(s) to VM.
2019-12-04 10:12:00 (23614): Adding virtual disk drive to VM. (vm_image.vdi)
2019-12-04 10:12:01 (23614): Adding VirtualBox Guest Additions to VM.
2019-12-04 10:12:01 (23614): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2019-12-04 10:12:01 (23614): forwarding host port 38877 to guest port 80
2019-12-04 10:12:01 (23614): Enabling remote desktop for VM.
2019-12-04 10:12:01 (23614): Enabling shared directory for VM.
2019-12-04 10:12:02 (23614): Starting VM. (boinc_534500489dcfd3cd, slot#3)
2019-12-04 10:12:03 (23614): Successfully started VM. (PID = '24330')
2019-12-04 10:12:03 (23614): Reporting VM Process ID to BOINC.
2019-12-04 10:12:03 (23614): Guest Log: BIOS: VirtualBox 5.1.30
2019-12-04 10:12:03 (23614): Guest Log: BIOS: ata0-0: PCHS=16383/16/63 LCHS=1024/255/63
2019-12-04 10:12:04 (23614): VM state change detected. (old = 'poweroff', new = 'running')
2019-12-04 10:12:04 (23614): Detected: Web Application Enabled (http://localhost:38877)
2019-12-04 10:12:04 (23614): Detected: Remote Desktop Enabled (localhost:56483)
2019-12-04 10:12:04 (23614): Preference change detected
2019-12-04 10:12:04 (23614): Setting CPU throttle for VM. (100%)
2019-12-04 10:12:14 (23614): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 300 seconds) or (Vbox_job.xml: 900 seconds))
2019-12-04 10:12:14 (23614): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2019-12-04 10:12:14 (23614): Guest Log: BIOS: Booting from Hard Disk...
2019-12-04 10:12:14 (23614): Guest Log: BIOS: KBD: unsupported int 16h function 03
2019-12-04 10:12:14 (23614): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2019-12-04 10:12:14 (23614): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2019-12-04 10:12:14 (23614): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2019-12-04 10:12:14 (23614): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2019-12-04 10:12:14 (23614): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2019-12-04 10:12:14 (23614): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2019-12-04 10:12:14 (23614): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2019-12-04 10:12:14 (23614): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2019-12-04 10:12:14 (23614): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2019-12-04 10:12:14 (23614): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2019-12-04 10:12:14 (23614): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2019-12-04 10:12:14 (23614): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2019-12-04 10:12:14 (23614): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2019-12-04 10:12:14 (23614): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2019-12-04 10:12:14 (23614): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2019-12-04 10:12:14 (23614): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2019-12-04 10:12:14 (23614): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2019-12-04 10:12:14 (23614): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2019-12-04 10:12:14 (23614): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2019-12-04 10:12:14 (23614): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2019-12-04 10:12:14 (23614): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2019-12-04 10:12:14 (23614): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2019-12-04 10:12:14 (23614): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2019-12-04 10:12:14 (23614): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2019-12-04 10:12:14 (23614): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2019-12-04 10:12:14 (23614): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2019-12-04 10:12:14 (23614): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2019-12-04 10:12:14 (23614): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2019-12-04 10:12:14 (23614): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2019-12-04 10:12:14 (23614): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2019-12-04 10:12:14 (23614): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2019-12-04 10:12:16 (23614): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2019-12-04 10:12:16 (23614): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2019-12-04 10:12:19 (23614): Guest Log: Checking CVMFS...
2019-12-04 10:12:25 (23614): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2019-12-04 10:12:25 (23614): Guest Log: 00:00:00.000429 main     Log opened 2019-12-04T10:12:23.468245000Z
2019-12-04 10:12:25 (23614): Guest Log: 00:00:00.000671 main     OS Product: Linux
2019-12-04 10:12:25 (23614): Guest Log: 00:00:00.000734 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2019-12-04 10:12:25 (23614): Guest Log: 00:00:00.000780 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2019-12-04 10:12:25 (23614): Guest Log: 00:00:00.000832 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2019-12-04 10:12:25 (23614): Guest Log: 00:00:00.000833 main     Process ID: 1748
2019-12-04 10:12:25 (23614): Guest Log: 00:00:00.000834 main     Package type: LINUX_64BITS_GENERIC
2019-12-04 10:12:25 (23614): Guest Log: 00:00:00.002190 main     5.2.32 r132073 started. Verbose level = 0
2019-12-04 10:12:25 (23614): Guest Log: 00:00:00.006532 main     Error: Service 'control' failed to initialize: VERR_INVALID_PARAMETER
2019-12-04 10:12:25 (23614): Guest Log: 00:00:00.006733 main     Session 0 is about to close ...
2019-12-04 10:12:25 (23614): Guest Log: 00:00:00.006775 main     Stopping all guest processes ...
2019-12-04 10:12:25 (23614): Guest Log: 00:00:00.006819 main     Closing all guest files ...
2019-12-04 10:12:25 (23614): Guest Log: 00:00:00.007302 main     Ended.
2019-12-04 10:12:43 (23614): Guest Log: CVMFS is ok
2019-12-04 10:12:44 (23614): Guest Log: Mounting shared directory
2019-12-04 10:12:44 (23614): Guest Log: Copying input files
2019-12-04 10:12:46 (23614): Guest Log: Copied input files into RunAtlas.
2019-12-04 10:12:47 (23614): Guest Log: copied the webapp to /var/www
2019-12-04 10:12:48 (23614): Guest Log: This vm does not need to setup an http proxy
2019-12-04 10:12:48 (23614): Guest Log: ATHENA_PROC_NUMBER=8
2019-12-04 10:12:49 (23614): Guest Log:  *** Starting ATLAS job. (PandaID=4566619776 taskID=19905999) ***
2019-12-04 11:51:08 (23614): Status Report: Elapsed Time: '6000.957848'
2019-12-04 11:51:08 (23614): Status Report: CPU Time: '32621.540000'
2019-12-04 13:30:10 (23614): Status Report: Elapsed Time: '12000.957848'
2019-12-04 13:30:10 (23614): Status Report: CPU Time: '73490.490000'
2019-12-04 13:43:53 (23614): Guest Log:  *** Job finished ***
2019-12-04 13:43:53 (23614): Guest Log:  *** The last 20 lines of the pilot log: ***
2019-12-04 13:43:53 (23614): Guest Log: -rw-------.  1 atlas atlas 11357 Jul 25 14:38 LICENSE
2019-12-04 13:43:53 (23614): Guest Log: -rw-------.  1 atlas atlas    20 Sep  9 11:04 MANIFEST.IN
2019-12-04 13:43:53 (23614): Guest Log: -rw-------.  1 atlas atlas    11 Dec  4 10:13 pandaIDs.out
2019-12-04 13:43:53 (23614): Guest Log: drwx------. 14 atlas atlas   216 Dec  4 10:13 pilot
2019-12-04 13:43:53 (23614): Guest Log: -rwx------.  1 atlas atlas 20750 Dec  2 10:02 pilot.py
2019-12-04 13:43:53 (23614): Guest Log: -rw-------.  1 atlas atlas     8 Dec  2 10:02 PILOTVERSION
2019-12-04 13:43:53 (23614): Guest Log: -rw-------.  1 atlas atlas  2212 Nov 14 10:01 README.md
2019-12-04 13:43:53 (23614): Guest Log: -rw-------.  1 atlas atlas   766 Oct 10 14:01 setup.py
2019-12-04 13:43:53 (23614): Guest Log: -rw-------.  1 atlas atlas   221 Jul 25 14:38 TODO.md
2019-12-04 13:43:53 (23614): Guest Log: 2019-12-04 13:43:50 UTC [wrapper] pandaIDs.out files:
2019-12-04 13:43:53 (23614): Guest Log: -rw-------. 1 atlas atlas 11 Dec  4 10:13 /home/atlas/RunAtlas/pilot2/pandaIDs.out
2019-12-04 13:43:53 (23614): Guest Log: 2019-12-04 13:43:50 UTC [wrapper] pandaIDs.out content:
2019-12-04 13:43:53 (23614): Guest Log: 4566619776
2019-12-04 13:43:53 (23614): Guest Log: 2019-12-04 13:43:50 UTC [wrapper] Test setup, not cleaning
2019-12-04 13:43:53 (23614): Guest Log: 2019-12-04 13:43:50 UTC [wrapper] ==== wrapper stdout END ====
2019-12-04 13:43:53 (23614): Guest Log: 2019-12-04 13:43:51 UTC [wrapper] ==== wrapper stderr END ====
2019-12-04 13:43:53 (23614): Guest Log: 2019-12-04 13:43:51 UTC [wrapper] wrapper wrapperexiting ec=0, duration=12664
2019-12-04 13:43:53 (23614): Guest Log: 2019-12-04 13:43:51 UTC [wrapper] apfmon messages muted
2019-12-04 13:43:53 (23614): Guest Log:  *** Error codes and diagnostics ***
2019-12-04 13:43:53 (23614): Guest Log:     "exeErrorCode": 0,
2019-12-04 13:43:53 (23614): Guest Log:     "exeErrorDiag": "",
2019-12-04 13:43:53 (23614): Guest Log:     "pilotErrorCode": 0,
2019-12-04 13:43:53 (23614): Guest Log:     "pilotErrorDiag": "",
2019-12-04 13:43:53 (23614): Guest Log:  *** Listing of results directory ***
2019-12-04 13:43:53 (23614): Guest Log: total 124332
2019-12-04 13:43:53 (23614): Guest Log: -rw-r--r--. 1 atlas atlas    266835 Dec  3 12:23 pilot2.tar.gz
2019-12-04 13:43:53 (23614): Guest Log: -rw-------. 1 atlas atlas      2894 Dec  3 13:01 pandaJobData.out
2019-12-04 13:43:53 (23614): Guest Log: -rwx------. 1 atlas atlas     12849 Dec  3 13:01 runpilot2-wrapper.sh
2019-12-04 13:43:53 (23614): Guest Log: -rw-r--r--. 1 atlas atlas      4474 Dec  3 13:01 queuedata.json
2019-12-04 13:43:53 (23614): Guest Log: -rw-r--r--. 1 atlas atlas     15059 Dec  4 10:12 start_atlas.sh
2019-12-04 13:43:53 (23614): Guest Log: -rw-r--r--. 1 atlas atlas       812 Dec  4 10:12 RTE.tar.gz
2019-12-04 13:43:53 (23614): Guest Log: -rw-r--r--. 1 atlas atlas    275099 Dec  4 10:12 input.tar.gz
2019-12-04 13:43:53 (23614): Guest Log: -rw-r--r--. 1 atlas atlas      8418 Dec  4 10:12 init_data.xml
2019-12-04 13:43:53 (23614): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Dec  4 10:12 EVNT.19609563._000350.pool.root.1 -> /data/./ATLAS.root_0
2019-12-04 13:43:53 (23614): Guest Log: drwxr-xr-x. 3 atlas atlas        17 Dec  4 10:12 APPS
2019-12-04 13:43:53 (23614): Guest Log: -rw-------. 1 atlas atlas   3752055 Dec  4 10:13 agis_schedconf.cvmfs.json
2019-12-04 13:43:53 (23614): Guest Log: -rw-------. 1 atlas atlas   7752774 Dec  4 10:13 agis_ddmendpoints.json
2019-12-04 13:43:53 (23614): Guest Log: drwx------. 3 atlas atlas       229 Dec  4 10:13 pilot2
2019-12-04 13:43:53 (23614): Guest Log: -rw-------. 1 atlas atlas 111039038 Dec  4 13:42 HITS.19905999._017207.pool.root.1
2019-12-04 13:43:53 (23614): Guest Log: -rw-------. 1 atlas atlas       843 Dec  4 13:42 memory_monitor_summary.json
2019-12-04 13:43:53 (23614): Guest Log: -rw-------. 1 atlas atlas   1330022 Dec  4 13:42 log.19905999._017207.job.log.tgz.1
2019-12-04 13:43:53 (23614): Guest Log: -rw-------. 1 atlas atlas     68206 Dec  4 13:42 heartbeat.json
2019-12-04 13:43:53 (23614): Guest Log: -rw-------. 1 atlas atlas      8509 Dec  4 13:43 pilotlog.txt
2019-12-04 13:43:53 (23614): Guest Log: -rw-------. 1 atlas atlas    653533 Dec  4 13:43 log.19905999._017207.job.log.1
2019-12-04 13:43:53 (23614): Guest Log: -rw-------. 1 atlas atlas       463 Dec  4 13:43 output.list
2019-12-04 13:43:53 (23614): Guest Log: -rw-r--r--. 1 atlas atlas       692 Dec  4 13:43 runtime_log
2019-12-04 13:43:53 (23614): Guest Log: -rw-r--r--. 1 atlas atlas      7935 Dec  4 13:43 runtime_log.err
2019-12-04 13:43:53 (23614): Guest Log: -rw-------. 1 atlas atlas   2058240 Dec  4 13:43 result.tar.gz
2019-12-04 13:43:53 (23614): Guest Log: -rw-------. 1 atlas atlas       567 Dec  4 13:43 i8fLDmtyMwvn9Rq4apoT9bVoABFKDmABFKDmumMWDmABFKDmntlFKm.diag
2019-12-04 13:43:53 (23614): Guest Log: Looking for outputfile HITS.19905999._017207.pool.root.1
2019-12-04 13:43:53 (23614): Guest Log: HITS file was successfully produced
2019-12-04 13:43:53 (23614): Guest Log: -rw-------. 1 atlas atlas 111039038 Dec  4 13:42 /home/atlas/RunAtlas/HITS.19905999._017207.pool.root.1
2019-12-04 13:43:54 (23614): Guest Log: Successfully finished the ATLAS job!
2019-12-04 13:43:54 (23614): Guest Log: Copying the results back to the shared directory!
2019-12-04 13:43:54 (23614): Guest Log:  *** Contents of shared directory: ***
2019-12-04 13:43:54 (23614): Guest Log: total 329628
2019-12-04 13:43:54 (23614): Guest Log: -rw-r--r--. 1 root root 224123041 Dec  4  2019 ATLAS.root_0
2019-12-04 13:43:54 (23614): Guest Log: -rw-r--r--. 1 root root 111039038 Dec  4 13:42 HITS.pool.root.1
2019-12-04 13:43:54 (23614): Guest Log: -rw-r--r--. 1 root root      8418 Dec  4  2019 init_data.xml
2019-12-04 13:43:54 (23614): Guest Log: -rw-r--r--. 1 root root    275099 Dec  4  2019 input.tar.gz
2019-12-04 13:43:54 (23614): Guest Log: -rw-r--r--. 1 root root   2058240 Dec  4  2019 result.tar.gz
2019-12-04 13:43:54 (23614): Guest Log: -rw-r--r--. 1 root root       812 Dec  4  2019 RTE.tar.gz
2019-12-04 13:43:54 (23614): Guest Log: -rw-r--r--. 1 root root     15059 Dec  4  2019 start_atlas.sh
2019-12-04 13:43:54 (23614): Guest Log:  *** Success! Shutting down the machine. ***
2019-12-04 13:43:54 (23614): VM Completion File Detected.
2019-12-04 13:43:54 (23614): Powering off VM.
2019-12-04 13:43:55 (23614): Successfully stopped VM.
2019-12-04 13:43:55 (23614): Deregistering VM. (boinc_534500489dcfd3cd, slot#3)
2019-12-04 13:43:55 (23614): Removing network bandwidth throttle group from VM.
2019-12-04 13:43:55 (23614): Removing storage controller(s) from VM.
2019-12-04 13:43:55 (23614): Removing VM from VirtualBox.
2019-12-04 13:43:56 (23614): Removing virtual disk drive from VirtualBox.
13:44:01 (23614): called boinc_finish(0)

</stderr_txt>
]]>
Development for LHC@home

Stderr output
