| Name | JfoNDmz5czvnShfckohDCDFpABFKDmABFKDmZNvaDmABFKDmRPqY2m_0 |
| Workunit | 1960172 |
| Created | 12 Dec 2019, 12:50:05 UTC |
| Sent | 12 Dec 2019, 13:31:17 UTC |
| Report deadline | 19 Dec 2019, 13:31:17 UTC |
| Received | 12 Dec 2019, 14:45:33 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 3682 |
| Run time | 12 min 5 sec |
| CPU time | 23 min 35 sec |
| Validate state | Valid |
| Credit | 29.56 |
| Device peak FLOPS | 17.61 GFLOPS |
| Application version | ATLAS Simulation v0.92 (native_mt) x86_64-pc-linux-gnu |
| Peak working set size | 1.79 GB |
| Peak swap size | 2.63 GB |
| Peak disk usage | 720.21 MB |
Stderr output
<core_client_version>7.16.1</core_client_version>
<![CDATA[
<stderr_txt>
14:56:57 (2474276): wrapper (7.7.26015): starting
14:56:57 (2474276): wrapper: running run_atlas (--nthreads 4)
Thu Dec 12 14:56:57 CET 2019: Using singularity image /cvmfs/atlas.cern.ch/repo/containers/images/singularity/x86_64-centos7.img
Thu Dec 12 14:56:57 CET 2019: Arguments: --nthreads 4
Thu Dec 12 14:56:57 CET 2019: Threads: 4
Thu Dec 12 14:56:57 CET 2019: Checking for CVMFS
Thu Dec 12 14:56:57 CET 2019: Probing /cvmfs/atlas.cern.ch... OK
Thu Dec 12 14:56:57 CET 2019: Probing /cvmfs/atlas-condb.cern.ch... OK
Thu Dec 12 14:56:57 CET 2019: Probing /cvmfs/grid.cern.ch... OK
Thu Dec 12 14:56:57 CET 2019: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
Thu Dec 12 14:56:57 CET 2019: 2.5.1.0 2362617 78 40540 57872 1 78 7467238 10240000 0 65024 0 126705 99.9968 40976 83284 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://137.138.149.107:3128 1
Thu Dec 12 14:56:57 CET 2019: CVMFS is ok
Thu Dec 12 14:56:57 CET 2019: Checking for singularity binary...
Thu Dec 12 14:56:57 CET 2019: Using singularity found in PATH at /usr/bin/singularity
Thu Dec 12 14:56:57 CET 2019: Running /usr/bin/singularity --version
Thu Dec 12 14:56:57 CET 2019: singularity version 3.4.2-1.1.el7
Thu Dec 12 14:56:57 CET 2019: Checking singularity works with /usr/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/images/singularity/x86_64-centos7.img hostname
Thu Dec 12 14:56:57 CET 2019: pcoslo5.cern.ch
Thu Dec 12 14:56:57 CET 2019: Singularity works
Thu Dec 12 14:56:58 CET 2019: Set ATHENA_PROC_NUMBER=4
Thu Dec 12 14:56:58 CET 2019: Starting ATLAS job with PandaID=4002876565
Thu Dec 12 14:56:58 CET 2019: Running command: /usr/bin/singularity exec --pwd /home/dcameron/boinc/slots/0 -B /cvmfs,/home /cvmfs/atlas.cern.ch/repo/containers/images/singularity/x86_64-centos7.img sh start_atlas.sh
Thu Dec 12 15:08:59 CET 2019: *** The last 200 lines of the pilot log: ***
Thu Dec 12 15:08:59 CET 2019: "Avg": {
Thu Dec 12 15:08:59 CET 2019: "avgPSS": 648,
Thu Dec 12 15:08:59 CET 2019: "avgRSS": 1632,
Thu Dec 12 15:08:59 CET 2019: "avgSwap": 0,
Thu Dec 12 15:08:59 CET 2019: "avgVMEM": 9768,
Thu Dec 12 15:08:59 CET 2019: "rateRBYTES": 0,
Thu Dec 12 15:08:59 CET 2019: "rateRCHAR": 97,
Thu Dec 12 15:08:59 CET 2019: "rateWBYTES": 0,
Thu Dec 12 15:08:59 CET 2019: "rateWCHAR": 1
Thu Dec 12 15:08:59 CET 2019: },
Thu Dec 12 15:08:59 CET 2019: "Max": {
Thu Dec 12 15:08:59 CET 2019: "maxPSS": 648,
Thu Dec 12 15:08:59 CET 2019: "maxRSS": 1632,
Thu Dec 12 15:08:59 CET 2019: "maxSwap": 0,
Thu Dec 12 15:08:59 CET 2019: "maxVMEM": 9768,
Thu Dec 12 15:08:59 CET 2019: "totRBYTES": 0,
Thu Dec 12 15:08:59 CET 2019: "totRCHAR": 5844,
Thu Dec 12 15:08:59 CET 2019: "totWBYTES": 0,
Thu Dec 12 15:08:59 CET 2019: "totWCHAR": 89
Thu Dec 12 15:08:59 CET 2019: }
Thu Dec 12 15:08:59 CET 2019: },
Thu Dec 12 15:08:59 CET 2019: "postExe": {
Thu Dec 12 15:08:59 CET 2019: "cpuTime": 0,
Thu Dec 12 15:08:59 CET 2019: "wallTime": 1
Thu Dec 12 15:08:59 CET 2019: },
Thu Dec 12 15:08:59 CET 2019: "preExe": {
Thu Dec 12 15:08:59 CET 2019: "cpuTime": 0,
Thu Dec 12 15:08:59 CET 2019: "wallTime": 1
Thu Dec 12 15:08:59 CET 2019: },
Thu Dec 12 15:08:59 CET 2019: "total": {
Thu Dec 12 15:08:59 CET 2019: "cpuTime": 31,
Thu Dec 12 15:08:59 CET 2019: "wallTime": 64
Thu Dec 12 15:08:59 CET 2019: },
Thu Dec 12 15:08:59 CET 2019: "validation": {
Thu Dec 12 15:08:59 CET 2019: "cpuTime": 0,
Thu Dec 12 15:08:59 CET 2019: "wallTime": 0
Thu Dec 12 15:08:59 CET 2019: },
Thu Dec 12 15:08:59 CET 2019: "wallTime": 63
Thu Dec 12 15:08:59 CET 2019: }
Thu Dec 12 15:08:59 CET 2019: },
Thu Dec 12 15:08:59 CET 2019: "machine": {
Thu Dec 12 15:08:59 CET 2019: "cpu_family": "6",
Thu Dec 12 15:08:59 CET 2019: "linux_distribution": [
Thu Dec 12 15:08:59 CET 2019: "CentOS Linux",
Thu Dec 12 15:08:59 CET 2019: "7.6.1810",
Thu Dec 12 15:08:59 CET 2019: "Core"
Thu Dec 12 15:08:59 CET 2019: ],
Thu Dec 12 15:08:59 CET 2019: "model": "60",
Thu Dec 12 15:08:59 CET 2019: "model_name": "Intel(R) Core(TM) i7-4790 CPU @ 3.60GHz",
Thu Dec 12 15:08:59 CET 2019: "node": "pcoslo5.cern.ch",
Thu Dec 12 15:08:59 CET 2019: "platform": "Linux-3.10.0-1062.4.3.el7.x86_64-x86_64-with-centos-7.6.1810-Core"
Thu Dec 12 15:08:59 CET 2019: },
Thu Dec 12 15:08:59 CET 2019: "transform": {
Thu Dec 12 15:08:59 CET 2019: "cpuEfficiency": 0.5571,
Thu Dec 12 15:08:59 CET 2019: "cpuPWEfficiency": 0.5975,
Thu Dec 12 15:08:59 CET 2019: "cpuTime": 3,
Thu Dec 12 15:08:59 CET 2019: "cpuTimeTotal": 1437,
Thu Dec 12 15:08:59 CET 2019: "externalCpuTime": 3,
Thu Dec 12 15:08:59 CET 2019: "processedEvents": 10,
Thu Dec 12 15:08:59 CET 2019: "trfPredata": null,
Thu Dec 12 15:08:59 CET 2019: "wallTime": 631
Thu Dec 12 15:08:59 CET 2019: }
Thu Dec 12 15:08:59 CET 2019: }
Thu Dec 12 15:08:59 CET 2019: }
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:33,210 | DEBUG | queue_monitor | pilot.util.auxiliary.4002876565 | update_server | xml:will send fileinfo
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:33,210 | INFO | queue_monitor | pilot.control.job.4002876565 | send_state | pilot will not update the server (heartbeat message will be written to file)
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:33,210 | INFO | queue_monitor | pilot.control.job.4002876565 | send_state | job 4002876565 has finished - writing final server update
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:33,210 | DEBUG | queue_monitor | pilot.control.job.4002876565 | get_data_structure | building data structure to be sent to server with heartbeat
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:33,210 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | get_job_metrics | will not add max space = -353954381 B to job metrics
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:33,211 | DEBUG | queue_monitor | pilot.api.analytics | get_fitted_data | removing tails from data to be fitted
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:33,211 | WARNING | queue_monitor | pilot.api.analytics | get_fitted_data | wrong length of table data, x=[1576159352.0, 1576159413.0, 1576159474.0, 1576159535.0], y=[2454729.0, 2490742.0, 2505695.0, 2090363.0] (must be same and length>=4)
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:33,211 | DEBUG | queue_monitor | pilot.util.auxiliary.4002876565 | get_job_metrics | job metrics="coreCount=4 actualCoreCount=3 nEvents=10"
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:33,211 | INFO | queue_monitor | pilot.control.job.4002876565 | get_data_structure | total number of processed events: 10 (read)
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:33,211 | INFO | queue_monitor | pilot.user.atlas.utilities | get_memory_values | using path: /home/dcameron/boinc/slots/0/PanDA_Pilot-4002876565/memory_monitor_summary.json (trf name=prmon)
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:33,212 | DEBUG | queue_monitor | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'Max': {'rx_packets': 28839, 'nprocs': 9, 'nthreads': 1, 'rx_bytes': 20869516, 'wtime': 616, 'rss': 9422608, 'write_bytes': 16830464, 'vmem': 14016320, 'read_bytes': 3088617472, 'stime': 15, 'tx_bytes': 25811076, 'pss': 2505695, 'wchar': 24032498, 'rchar': 1004716905, 'tx_packets': 30076, 'swap': 0, 'utime': 1407}, 'Avg': {'write_bytes': 27322, 'nprocs': 6, 'nthreads': 0, 'rx_bytes': 33879, 'rx_packets': 46, 'vmem': 8112298, 'read_bytes': 5013989, 'swap': 0, 'tx_bytes': 41901, 'pss': 1769662, 'wchar': 39013, 'rchar': 1631033, 'tx_packets': 48, 'rss': 5236386}}
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:33,212 | INFO | queue_monitor | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard info from prmon json
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:33,212 | INFO | queue_monitor | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard memory fields from prmon json
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:33,212 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | ..............................
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:33,212 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . Timing measurements:
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:33,212 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . get job = 0 s
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:33,212 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . initial setup = 0 s
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:33,212 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . payload setup = 0 s
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:33,212 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . total setup = 0 s
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:33,212 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . stage-in = 0 s
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:33,212 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . payload execution = 670 s
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:33,213 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . stage-out = 1 s
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:33,213 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | ..............................
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:33,213 | DEBUG | queue_monitor | pilot.control.job.4002876565 | send_state | wrote heartbeat to file /home/dcameron/boinc/slots/0/heartbeat.json
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:33,213 | DEBUG | queue_monitor | pilot.control.job | queue_monitor | job 4002876565 was dequeued from the monitored payloads queue
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:33,213 | DEBUG | queue_monitor | pilot.control.job | queue_monitor | tmp job object deleted
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:33,260 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report |
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:33,260 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | job summary report
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:33,260 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | --------------------------------------------------
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:33,260 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | PanDA job id: 4002876565
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:33,260 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | task id: 000649-3919296-19575
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:33,260 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | errors: (none)
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:33,260 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | status: LOG_TRANSFER = DONE
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:33,260 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | pilot state: finished
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:33,260 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | transexitcode: 0
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:33,261 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | exeerrorcode: 0
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:33,261 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | exeerrordiag:
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:33,261 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | exitcode: 0
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:33,261 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | exitmsg: OK
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:33,261 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | cpuconsumptiontime: 1426 s
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:33,261 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | nevents: 10
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:33,261 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | neventsw: 0
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:33,261 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | pid: 2481146
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:33,261 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | pgrp: 2481146
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:33,261 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | corecount: 4
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:33,261 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | event service: False
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:33,261 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | --------------------------------------------------
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:33,261 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report |
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:33,261 | INFO | retrieve | pilot.control.job.4002876565 | has_job_completed | job 4002876565 has completed
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:33,261 | INFO | retrieve | pilot.util.processes | cleanup | overall cleanup function is called
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:33,265 | DEBUG | retrieve | pilot.util.processes | cleanup | work directory was removed: /home/dcameron/boinc/slots/0/PanDA_Pilot-4002876565
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:34,266 | INFO | retrieve | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [2481146]
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:34,267 | INFO | retrieve | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 2481146
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:34,267 | INFO | retrieve | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:35,272 | INFO | retrieve | pilot.util.processes | cleanup | collected zombie processes
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:35,272 | INFO | retrieve | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=2481146
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:35,331 | INFO | retrieve | pilot.util.processes | kill_processes | process IDs to be killed: [2481146] (in reverse order)
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:35,362 | WARNING | retrieve | pilot.util.processes | kill_processes | found no corresponding commands to process id(s)
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:35,362 | INFO | retrieve | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:35,362 | INFO | retrieve | pilot.util.processes | cleanup | resetting job object
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:35,363 | INFO | retrieve | pilot.control.job | retrieve | ready for new job
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:35,363 | INFO | retrieve | root | retrieve | pilot has finished for previous job - re-establishing logging
Thu Dec 12 15:08:59 CET 2019: mpi4py not found
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:35,364 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner | ****************************************
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:35,364 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 2.3.3 (16) ***
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:35,364 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner | ****************************************
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:35,364 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner |
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:35,365 | INFO | retrieve | pilot.util.auxiliary | display_architecture_info | architecture information:
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:35,398 | INFO | retrieve | pilot.util.auxiliary | display_architecture_info |
Thu Dec 12 15:08:59 CET 2019: LSB Version: :core-4.1-amd64:core-4.1-noarch
Thu Dec 12 15:08:59 CET 2019: Distributor ID: CentOS
Thu Dec 12 15:08:59 CET 2019: Description: CentOS Linux release 7.6.1810 (Core)
Thu Dec 12 15:08:59 CET 2019: Release: 7.6.1810
Thu Dec 12 15:08:59 CET 2019: Codename: Core
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:35,398 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner | ****************************************
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:35,899 | DEBUG | retrieve | pilot.util.monitoring | check_local_space | checking local space on /home/dcameron/boinc/slots/0
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:35,908 | INFO | retrieve | pilot.util.monitoring | check_local_space | sufficient remaining disk space (36491493376 B)
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:35,908 | WARNING | retrieve | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:35,908 | DEBUG | retrieve | pilot.control.job | retrieve | [job] retrieve thread has finished
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:35,924 | WARNING | copytool_out | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:35,980 | DEBUG | job | pilot.control.job | control | job control ending since graceful_stop has been set
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:35,980 | DEBUG | job | pilot.control.job | control | [job] control thread has finished
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:36,050 | DEBUG | create_data_payload | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:36,050 | DEBUG | validate | pilot.control.job | validate | [job] validate thread has finished
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:36,084 | INFO | validate_pre | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:36,100 | INFO | monitor | pilot.control.monitor | control | [monitor] control thread has ended
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:36,132 | DEBUG | MainThread | pilot.workflow.generic | run | thread count now at 11 threads
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:36,133 | DEBUG | MainThread | pilot.workflow.generic | run | enumerate: [<_MainThread(MainThread, started 139749649483584)>, <ExcThread(validate_post, started 139749067040512)>, <ExcThread(queue_monitoring, started 139749083825920)>, <ExcThread(copytool_in, started 139749058647808)>, <ExcThread(failed_post, started 139748563740416)>, <ExcThread(execute_payloads, started 139748555347712)>, <ExcThread(payload, started 139749453494016)>, <ExcThread(queue_monitor, started 139748546955008)>, <ExcThread(copytool_out, started 139749461886720)>, <ExcThread(job_monitor, started 139748572133120)>, <ExcThread(data, started 139749470279424)>]
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:36,272 | DEBUG | data | pilot.control.data | control | data control ending since graceful_stop has been set
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:36,272 | DEBUG | data | pilot.control.data | control | [data] control thread has finished
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:36,337 | DEBUG | copytool_in | pilot.control.data | copytool_in | [data] copytool_in thread has finished
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:36,555 | INFO | failed_post | pilot.control.payload | failed_post | [payload] failed_post thread has finished
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:36,570 | DEBUG | payload | pilot.control.payload | control | payload control ending since graceful_stop has been set
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:36,570 | DEBUG | payload | pilot.control.payload | control | [payload] control thread has finished
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:36,716 | INFO | execute_payloads | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:36,924 | DEBUG | copytool_out | pilot.control.data | copytool_out | [data] copytool_out thread has finished
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:37,116 | INFO | validate_post | pilot.control.payload | validate_post | [payload] validate_post thread has finished
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:37,138 | DEBUG | MainThread | pilot.workflow.generic | run | thread count now at 4 threads
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:37,138 | DEBUG | MainThread | pilot.workflow.generic | run | enumerate: [<_MainThread(MainThread, started 139749649483584)>, <ExcThread(queue_monitoring, started 139749083825920)>, <ExcThread(queue_monitor, started 139748546955008)>, <ExcThread(job_monitor, started 139748572133120)>]
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:38,222 | WARNING | queue_monitor | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:38,222 | DEBUG | queue_monitor | pilot.control.job | queue_monitor | [job] queue monitor thread has finished
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:38,584 | WARNING | queue_monitoring | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:39,149 | DEBUG | MainThread | pilot.workflow.generic | run | thread count now at 3 threads
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:39,149 | DEBUG | MainThread | pilot.workflow.generic | run | enumerate: [<_MainThread(MainThread, started 139749649483584)>, <ExcThread(queue_monitoring, started 139749083825920)>, <ExcThread(job_monitor, started 139748572133120)>]
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:41,585 | DEBUG | queue_monitoring | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:42,160 | DEBUG | MainThread | pilot.workflow.generic | run | thread count now at 2 threads
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:42,160 | DEBUG | MainThread | pilot.workflow.generic | run | enumerate: [<_MainThread(MainThread, started 139749649483584)>, <ExcThread(job_monitor, started 139748572133120)>]
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:58,939 | WARNING | job_monitor | pilot.control.job | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 72 s)
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:58,939 | DEBUG | job_monitor | pilot.control.job | job_monitor | [job] job monitor thread has finished
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:59,228 | INFO | MainThread | pilot.workflow.generic | run | end of generic workflow (traces error code: 0)
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:59,229 | INFO | MainThread | root | wrap_up | traces error code: 0
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:59,229 | INFO | MainThread | root | wrap_up | pilot has finished
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:59 UTC [wrapper] ==== pilot stdout END ====
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:59 UTC [wrapper] ==== wrapper stdout RESUME ====
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:59 UTC [wrapper] Pilot exit status: 0
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:59 UTC [wrapper] STATUSCODE: 0
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:59 UTC [wrapper] apfmon messages muted
Thu Dec 12 15:08:59 CET 2019: ---- find pandaID.out ----
Thu Dec 12 15:08:59 CET 2019: total 60
Thu Dec 12 15:08:59 CET 2019: -rw-------. 1 dcameron zp 11357 Jul 25 16:38 LICENSE
Thu Dec 12 15:08:59 CET 2019: -rw-------. 1 dcameron zp 20 Sep 9 13:04 MANIFEST.IN
Thu Dec 12 15:08:59 CET 2019: -rw-------. 1 dcameron zp 11 Dec 12 14:57 pandaIDs.out
Thu Dec 12 15:08:59 CET 2019: drwx------. 14 dcameron zp 216 Dec 12 14:57 pilot
Thu Dec 12 15:08:59 CET 2019: -rwx------. 1 dcameron zp 20750 Dec 2 11:02 pilot.py
Thu Dec 12 15:08:59 CET 2019: -rw-------. 1 dcameron zp 8 Dec 2 11:02 PILOTVERSION
Thu Dec 12 15:08:59 CET 2019: -rw-------. 1 dcameron zp 2212 Nov 14 11:01 README.md
Thu Dec 12 15:08:59 CET 2019: -rw-------. 1 dcameron zp 766 Oct 10 16:01 setup.py
Thu Dec 12 15:08:59 CET 2019: -rw-------. 1 dcameron zp 221 Jul 25 16:38 TODO.md
Thu Dec 12 15:08:59 CET 2019: -rw-------. 1 dcameron zp 11 Dec 12 14:57 /home/dcameron/boinc/slots/0/pilot2/pandaIDs.out
Thu Dec 12 15:08:59 CET 2019: 4002876565
Thu Dec 12 15:08:59 CET 2019:
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:59 UTC [wrapper] Test setup, not cleaning
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:59 UTC [wrapper] ==== wrapper stdout END ====
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:59 UTC [wrapper] ==== wrapper stderr END ====
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:59 UTC [wrapper] wrapper wrapperexiting ec=0, duration=721
Thu Dec 12 15:08:59 CET 2019: 2019-12-12 14:08:59 UTC [wrapper] apfmon messages muted
Thu Dec 12 15:08:59 CET 2019: *** Error codes and diagnostics ***
Thu Dec 12 15:08:59 CET 2019: "exeErrorCode": 0,
Thu Dec 12 15:08:59 CET 2019: "exeErrorDiag": "",
Thu Dec 12 15:08:59 CET 2019: "pilotErrorCode": 0,
Thu Dec 12 15:08:59 CET 2019: "pilotErrorDiag": "",
Thu Dec 12 15:08:59 CET 2019: *** Listing of results directory ***
Thu Dec 12 15:08:59 CET 2019: total 379284
Thu Dec 12 15:08:59 CET 2019: -rw-r--r--. 1 dcameron zp 266835 Dec 12 13:26 pilot2.tar.gz
Thu Dec 12 15:08:59 CET 2019: -rw-r--r--. 1 dcameron zp 4492 Dec 12 13:46 queuedata.json
Thu Dec 12 15:08:59 CET 2019: -rwx------. 1 dcameron zp 12641 Dec 12 13:50 runpilot2-wrapper.sh
Thu Dec 12 15:08:59 CET 2019: -rw-------. 1 dcameron zp 2958 Dec 12 13:50 pandaJobData.out
Thu Dec 12 15:08:59 CET 2019: -rw-r--r--. 1 dcameron zp 107 Dec 12 14:56 wrapper_26015_x86_64-pc-linux-gnu
Thu Dec 12 15:08:59 CET 2019: -rwxr-xr-x. 1 dcameron zp 4813 Dec 12 14:56 run_atlas
Thu Dec 12 15:08:59 CET 2019: -rw-r--r--. 1 dcameron zp 112 Dec 12 14:56 job.xml
Thu Dec 12 15:08:59 CET 2019: -rw-r--r--. 1 dcameron zp 6274 Dec 12 14:56 init_data.xml
Thu Dec 12 15:08:59 CET 2019: drwxrwx--x. 2 dcameron zp 86 Dec 12 14:56 shared
Thu Dec 12 15:08:59 CET 2019: -rw-r--r--. 1 dcameron zp 0 Dec 12 14:56 boinc_lockfile
Thu Dec 12 15:08:59 CET 2019: -rw-r--r--. 1 dcameron zp 365251149 Dec 12 14:56 EVNT.14296418._001447.pool.root.1
Thu Dec 12 15:08:59 CET 2019: -rw-r--r--. 1 dcameron zp 815 Dec 12 14:56 RTE.tar.gz
Thu Dec 12 15:08:59 CET 2019: -rw-r--r--. 1 dcameron zp 275010 Dec 12 14:56 input.tar.gz
Thu Dec 12 15:08:59 CET 2019: -rw-r--r--. 1 dcameron zp 8581 Dec 12 14:56 start_atlas.sh
Thu Dec 12 15:08:59 CET 2019: drwxr-xr-x. 3 dcameron zp 17 Dec 12 14:56 APPS
Thu Dec 12 15:08:59 CET 2019: -rw-------. 1 dcameron zp 3742538 Dec 12 14:57 agis_schedconf.cvmfs.json
Thu Dec 12 15:08:59 CET 2019: -rw-------. 1 dcameron zp 7755224 Dec 12 14:57 agis_ddmendpoints.json
Thu Dec 12 15:08:59 CET 2019: drwx------. 3 dcameron zp 229 Dec 12 14:57 pilot2
Thu Dec 12 15:08:59 CET 2019: -rw-r--r--. 1 dcameron zp 534 Dec 12 15:04 boinc_task_state.xml
Thu Dec 12 15:08:59 CET 2019: -rw-------. 1 dcameron zp 9160791 Dec 12 15:07 HITS.000649-3919296-19575._078090.pool.root.1
Thu Dec 12 15:08:59 CET 2019: -rw-------. 1 dcameron zp 838 Dec 12 15:08 memory_monitor_summary.json
Thu Dec 12 15:08:59 CET 2019: -rw-------. 1 dcameron zp 714762 Dec 12 15:08 log.000649-3919296-19575._078090.job.log.tgz.1
Thu Dec 12 15:08:59 CET 2019: -rw-------. 1 dcameron zp 15057 Dec 12 15:08 heartbeat.json
Thu Dec 12 15:08:59 CET 2019: -rw-r--r--. 1 dcameron zp 8192 Dec 12 15:08 boinc_mmap_file
Thu Dec 12 15:08:59 CET 2019: -rw-r--r--. 1 dcameron zp 25 Dec 12 15:08 wrapper_checkpoint.txt
Thu Dec 12 15:08:59 CET 2019: -rw-------. 1 dcameron zp 8242 Dec 12 15:08 pilotlog.txt
Thu Dec 12 15:08:59 CET 2019: -rw-------. 1 dcameron zp 158050 Dec 12 15:08 log.000649-3919296-19575._078090.job.log.1
Thu Dec 12 15:08:59 CET 2019: -rw-------. 1 dcameron zp 504 Dec 12 15:08 JfoNDmz5czvnShfckohDCDFpABFKDmABFKDmZNvaDmABFKDmRPqY2m.diag
Thu Dec 12 15:08:59 CET 2019: -rw-r--r--. 1 dcameron zp 7492 Dec 12 15:08 runtime_log.err
Thu Dec 12 15:08:59 CET 2019: -rw-------. 1 dcameron zp 499 Dec 12 15:08 output.list
Thu Dec 12 15:08:59 CET 2019: -rw-r--r--. 1 dcameron zp 742 Dec 12 15:08 runtime_log
Thu Dec 12 15:08:59 CET 2019: -rw-------. 1 dcameron zp 901120 Dec 12 15:08 result.tar.gz
Thu Dec 12 15:08:59 CET 2019: -rw-r--r--. 1 dcameron zp 2109 Dec 12 15:08 stderr.txt
Thu Dec 12 15:08:59 CET 2019: HITS file was successfully produced:
Thu Dec 12 15:08:59 CET 2019: -rw-------. 1 dcameron zp 9160791 Dec 12 15:07 shared/HITS.pool.root.1
Thu Dec 12 15:08:59 CET 2019: *** Contents of shared directory: ***
Thu Dec 12 15:08:59 CET 2019: total 366808
Thu Dec 12 15:08:59 CET 2019: -rw-r--r--. 1 dcameron zp 815 Dec 12 14:56 RTE.tar.gz
Thu Dec 12 15:08:59 CET 2019: -rw-r--r--. 1 dcameron zp 275010 Dec 12 14:56 input.tar.gz
Thu Dec 12 15:08:59 CET 2019: -rw-r--r--. 1 dcameron zp 365251149 Dec 12 14:56 ATLAS.root_0
Thu Dec 12 15:08:59 CET 2019: -rw-r--r--. 1 dcameron zp 8553 Dec 12 14:56 start_atlas.sh
Thu Dec 12 15:08:59 CET 2019: -rw-------. 1 dcameron zp 9160791 Dec 12 15:07 HITS.pool.root.1
Thu Dec 12 15:08:59 CET 2019: -rw-------. 1 dcameron zp 901120 Dec 12 15:08 result.tar.gz
15:08:59 (2474276): run_atlas exited; CPU time 1415.373104
15:08:59 (2474276): called boinc_finish(0)
</stderr_txt>
]]>
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