| Name | aVCLDml5czvnShfckohDCDFpABFKDmABFKDmyiALDm8CFKDm7Ccs4m_1 |
| Workunit | 1960161 |
| Created | 12 Dec 2019, 16:03:16 UTC |
| Sent | 12 Dec 2019, 17:33:16 UTC |
| Report deadline | 19 Dec 2019, 17:33:16 UTC |
| Received | 12 Dec 2019, 18:37:24 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 3717 |
| Run time | 39 min 59 sec |
| CPU time | 42 min 39 sec |
| Validate state | Valid |
| Credit | 48.94 |
| Device peak FLOPS | 8.81 GFLOPS |
| Application version | ATLAS Simulation v0.92 (native_mt) x86_64-pc-linux-gnu |
| Peak working set size | 1.86 GB |
| Peak swap size | 2.55 GB |
| Peak disk usage | 730.61 MB |
Stderr output
<core_client_version>7.12.0</core_client_version>
<![CDATA[
<stderr_txt>
18:56:47 (6873): wrapper (7.7.26015): starting
18:56:47 (6873): wrapper: running run_atlas (--nthreads 2)
do 12 dec 2019 18:56:47 CET: Using singularity image /cvmfs/atlas.cern.ch/repo/containers/images/singularity/x86_64-centos7.img
do 12 dec 2019 18:56:47 CET: Arguments: --nthreads 2
do 12 dec 2019 18:56:47 CET: Threads: 2
do 12 dec 2019 18:56:47 CET: Checking for CVMFS
do 12 dec 2019 18:57:09 CET: Probing /cvmfs/atlas.cern.ch... OK
do 12 dec 2019 18:57:14 CET: Probing /cvmfs/atlas-condb.cern.ch... OK
do 12 dec 2019 18:57:19 CET: Probing /cvmfs/grid.cern.ch... OK
do 12 dec 2019 18:57:25 CET: Probing /cvmfs/cernvm-prod.cern.ch... OK
do 12 dec 2019 18:57:26 CET: Probing /cvmfs/sft.cern.ch... OK
do 12 dec 2019 18:57:28 CET: Probing /cvmfs/alice.cern.ch... OK
do 12 dec 2019 18:57:28 CET: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
do 12 dec 2019 18:57:28 CET: 2.5.2.0 7021 0 24620 57882 3 1 3317241 4194305 0 65024 0 0 n/a 20276 1777 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
do 12 dec 2019 18:57:28 CET: CVMFS is ok
do 12 dec 2019 18:57:28 CET: Checking for singularity binary...
do 12 dec 2019 18:57:28 CET: Singularity is not installed, using version from CVMFS
do 12 dec 2019 18:57:28 CET: Checking singularity works with /cvmfs/atlas.cern.ch/repo/containers/sw/singularity/x86_64-el7/current/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/images/singularity/x86_64-centos7.img hostname
do 12 dec 2019 18:59:10 CET: [34mINFO: [0m Convert SIF file to sandbox... LinAH125 [34mINFO: [0m Cleaning up image...
do 12 dec 2019 18:59:10 CET: Singularity works
do 12 dec 2019 18:59:34 CET: Set ATHENA_PROC_NUMBER=2
do 12 dec 2019 18:59:34 CET: Starting ATLAS job with PandaID=4002876565
do 12 dec 2019 18:59:34 CET: Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/singularity/x86_64-el7/current/bin/singularity exec --pwd /var/lib/boinc-client/slots/4 -B /cvmfs,/var /cvmfs/atlas.cern.ch/repo/containers/images/singularity/x86_64-centos7.img sh start_atlas.sh
do 12 dec 2019 19:36:44 CET: *** The last 200 lines of the pilot log: ***
do 12 dec 2019 19:36:44 CET: "avgRSS": 425203,
do 12 dec 2019 19:36:44 CET: "avgSwap": 0,
do 12 dec 2019 19:36:44 CET: "avgVMEM": 1158239,
do 12 dec 2019 19:36:44 CET: "rateRBYTES": 7587521,
do 12 dec 2019 19:36:44 CET: "rateRCHAR": 1860942,
do 12 dec 2019 19:36:44 CET: "rateWBYTES": 52451,
do 12 dec 2019 19:36:44 CET: "rateWCHAR": 68776
do 12 dec 2019 19:36:44 CET: },
do 12 dec 2019 19:36:44 CET: "Max": {
do 12 dec 2019 19:36:44 CET: "maxPSS": 748472,
do 12 dec 2019 19:36:44 CET: "maxRSS": 755108,
do 12 dec 2019 19:36:44 CET: "maxSwap": 0,
do 12 dec 2019 19:36:44 CET: "maxVMEM": 2206472,
do 12 dec 2019 19:36:44 CET: "totRBYTES": 1365753856,
do 12 dec 2019 19:36:44 CET: "totRCHAR": 334969716,
do 12 dec 2019 19:36:44 CET: "totWBYTES": 9441280,
do 12 dec 2019 19:36:44 CET: "totWCHAR": 12379822
do 12 dec 2019 19:36:44 CET: }
do 12 dec 2019 19:36:44 CET: },
do 12 dec 2019 19:36:44 CET: "postExe": {
do 12 dec 2019 19:36:44 CET: "cpuTime": 0,
do 12 dec 2019 19:36:44 CET: "wallTime": 1
do 12 dec 2019 19:36:44 CET: },
do 12 dec 2019 19:36:44 CET: "preExe": {
do 12 dec 2019 19:36:44 CET: "cpuTime": 1,
do 12 dec 2019 19:36:44 CET: "wallTime": 6
do 12 dec 2019 19:36:44 CET: },
do 12 dec 2019 19:36:44 CET: "total": {
do 12 dec 2019 19:36:44 CET: "cpuTime": 62,
do 12 dec 2019 19:36:44 CET: "wallTime": 163
do 12 dec 2019 19:36:44 CET: },
do 12 dec 2019 19:36:44 CET: "validation": {
do 12 dec 2019 19:36:44 CET: "cpuTime": 0,
do 12 dec 2019 19:36:44 CET: "wallTime": 0
do 12 dec 2019 19:36:44 CET: },
do 12 dec 2019 19:36:44 CET: "wallTime": 156
do 12 dec 2019 19:36:44 CET: }
do 12 dec 2019 19:36:44 CET: },
do 12 dec 2019 19:36:44 CET: "machine": {
do 12 dec 2019 19:36:44 CET: "cpu_family": "6",
do 12 dec 2019 19:36:44 CET: "linux_distribution": [
do 12 dec 2019 19:36:44 CET: "CentOS Linux",
do 12 dec 2019 19:36:44 CET: "7.6.1810",
do 12 dec 2019 19:36:44 CET: "Core"
do 12 dec 2019 19:36:44 CET: ],
do 12 dec 2019 19:36:44 CET: "model": "42",
do 12 dec 2019 19:36:44 CET: "model_name": "Intel(R) Core(TM) i7-2600 CPU @ 3.40GHz",
do 12 dec 2019 19:36:44 CET: "node": "LinAH125",
do 12 dec 2019 19:36:44 CET: "platform": "Linux-4.18.0-15-generic-x86_64-with-centos-7.6.1810-Core"
do 12 dec 2019 19:36:44 CET: },
do 12 dec 2019 19:36:44 CET: "transform": {
do 12 dec 2019 19:36:44 CET: "cpuEfficiency": 0.7407,
do 12 dec 2019 19:36:44 CET: "cpuPWEfficiency": 0.7577,
do 12 dec 2019 19:36:44 CET: "cpuTime": 5,
do 12 dec 2019 19:36:44 CET: "cpuTimeTotal": 2942,
do 12 dec 2019 19:36:44 CET: "externalCpuTime": 11,
do 12 dec 2019 19:36:44 CET: "processedEvents": 10,
do 12 dec 2019 19:36:44 CET: "trfPredata": null,
do 12 dec 2019 19:36:44 CET: "wallTime": 1940
do 12 dec 2019 19:36:44 CET: }
do 12 dec 2019 19:36:44 CET: }
do 12 dec 2019 19:36:44 CET: }
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:01,778 | DEBUG | queue_monitor | pilot.util.auxiliary.4002876565 | update_server | xml:will send fileinfo
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:01,778 | INFO | queue_monitor | pilot.control.job.4002876565 | send_state | pilot will not update the server (heartbeat message will be written to file)
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:01,778 | INFO | queue_monitor | pilot.control.job.4002876565 | send_state | job 4002876565 has finished - writing final server update
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:01,778 | DEBUG | queue_monitor | pilot.control.job.4002876565 | get_data_structure | building data structure to be sent to server with heartbeat
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:01,779 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | get_job_metrics | will not add max space = -355609165 B to job metrics
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:01,779 | DEBUG | queue_monitor | pilot.api.analytics | get_fitted_data | removing tails from data to be fitted
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:01,780 | INFO | queue_monitor | pilot.api.analytics | get_fitted_data | fitting pss+swap vs Time
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:01,780 | INFO | queue_monitor | pilot.api.analytics | get_fitted_data | current memory leak: -465.13 B/s (using 27 data points, chi2=3034988)
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:01,780 | DEBUG | queue_monitor | pilot.util.auxiliary.4002876565 | get_job_metrics | job metrics="coreCount=2 actualCoreCount=1 nEvents=10 leak=-465.13 chi2=3034988"
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:01,781 | INFO | queue_monitor | pilot.control.job.4002876565 | get_data_structure | total number of processed events: 10 (read)
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:01,781 | INFO | queue_monitor | pilot.user.atlas.utilities | get_memory_values | using path: /var/lib/boinc-client/slots/4/PanDA_Pilot-4002876565/memory_monitor_summary.json (trf name=prmon)
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:01,783 | DEBUG | queue_monitor | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'Max': {'rx_packets': 51941, 'nprocs': 8, 'nthreads': 1, 'rx_bytes': 52775044, 'wtime': 2005, 'rss': 5896180, 'write_bytes': 0, 'vmem': 8675792, 'read_bytes': 0, 'stime': 36, 'tx_bytes': 20981809, 'pss': 2307786, 'wchar': 0, 'rchar': 0, 'tx_packets': 29870, 'swap': 0, 'utime': 2884}, 'Avg': {'write_bytes': 0, 'nprocs': 6, 'nthreads': 0, 'rx_bytes': 26319, 'rx_packets': 25, 'vmem': 6338413, 'read_bytes': 0, 'swap': 0, 'tx_bytes': 10463, 'pss': 1824147, 'wchar': 0, 'rchar': 0, 'tx_packets': 14, 'rss': 4154353}}
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:01,783 | INFO | queue_monitor | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard info from prmon json
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:01,783 | INFO | queue_monitor | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard memory fields from prmon json
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:01,784 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | ..............................
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:01,784 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . Timing measurements:
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:01,784 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . get job = 0 s
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:01,784 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . initial setup = 1 s
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:01,784 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . payload setup = 0 s
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:01,784 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . total setup = 1 s
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:01,784 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . stage-in = 0 s
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:01,784 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . payload execution = 2050 s
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:01,784 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . stage-out = 3 s
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:01,785 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | ..............................
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:01,786 | DEBUG | queue_monitor | pilot.control.job.4002876565 | send_state | wrote heartbeat to file /var/lib/boinc-client/slots/4/heartbeat.json
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:01,786 | DEBUG | queue_monitor | pilot.control.job | queue_monitor | job 4002876565 was dequeued from the monitored payloads queue
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:01,786 | DEBUG | queue_monitor | pilot.control.job | queue_monitor | tmp job object deleted
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:01,808 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report |
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:01,808 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | job summary report
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:01,808 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | --------------------------------------------------
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:01,808 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | PanDA job id: 4002876565
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:01,808 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | task id: 000649-3918820-23650
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:01,808 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | errors: (none)
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:01,808 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | status: LOG_TRANSFER = DONE
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:01,808 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | pilot state: finished
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:01,809 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | transexitcode: 0
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:01,809 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | exeerrorcode: 0
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:01,809 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | exeerrordiag:
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:01,809 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | exitcode: 0
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:01,809 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | exitmsg: OK
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:01,809 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | cpuconsumptiontime: 2917 s
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:01,809 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | nevents: 10
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:01,809 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | neventsw: 0
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:01,809 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | pid: 14007
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:01,810 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | pgrp: 14007
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:01,810 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | corecount: 2
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:01,810 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | event service: False
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:01,810 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | --------------------------------------------------
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:01,810 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report |
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:01,810 | INFO | retrieve | pilot.control.job.4002876565 | has_job_completed | job 4002876565 has completed
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:01,810 | INFO | retrieve | pilot.util.processes | cleanup | overall cleanup function is called
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:01,814 | DEBUG | retrieve | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc-client/slots/4/PanDA_Pilot-4002876565
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:02,818 | INFO | retrieve | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [14007]
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:02,818 | INFO | retrieve | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 14007
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:02,818 | INFO | retrieve | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:03,821 | INFO | retrieve | pilot.util.processes | cleanup | collected zombie processes
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:03,821 | INFO | retrieve | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=14007
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:03,866 | INFO | retrieve | pilot.util.processes | kill_processes | process IDs to be killed: [14007] (in reverse order)
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:03,898 | WARNING | retrieve | pilot.util.processes | kill_processes | found no corresponding commands to process id(s)
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:03,898 | INFO | retrieve | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:03,898 | INFO | retrieve | pilot.util.processes | cleanup | resetting job object
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:03,898 | INFO | retrieve | pilot.control.job | retrieve | ready for new job
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:03,899 | INFO | retrieve | root | retrieve | pilot has finished for previous job - re-establishing logging
do 12 dec 2019 19:36:44 CET: mpi4py not found
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:03,928 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner | ****************************************
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:03,928 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 2.3.3 (16) ***
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:03,928 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner | ****************************************
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:03,928 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner |
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:03,929 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner | pilot is running in a VM
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:03,929 | INFO | retrieve | pilot.util.auxiliary | display_architecture_info | architecture information:
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:04,066 | INFO | retrieve | pilot.util.auxiliary | display_architecture_info |
do 12 dec 2019 19:36:44 CET: LSB Version: :core-4.1-amd64:core-4.1-noarch
do 12 dec 2019 19:36:44 CET: Distributor ID: CentOS
do 12 dec 2019 19:36:44 CET: Description: CentOS Linux release 7.6.1810 (Core)
do 12 dec 2019 19:36:44 CET: Release: 7.6.1810
do 12 dec 2019 19:36:44 CET: Codename: Core
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:04,067 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner | ****************************************
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:04,567 | DEBUG | retrieve | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc-client/slots/4
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:04,579 | INFO | retrieve | pilot.util.monitoring | check_local_space | sufficient remaining disk space (6060769280 B)
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:04,579 | WARNING | retrieve | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:04,579 | DEBUG | retrieve | pilot.control.job | retrieve | [job] retrieve thread has finished
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:04,724 | WARNING | copytool_out | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:04,736 | DEBUG | data | pilot.control.data | control | data control ending since graceful_stop has been set
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:04,736 | DEBUG | data | pilot.control.data | control | [data] control thread has finished
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:04,822 | INFO | validate_post | pilot.control.payload | validate_post | [payload] validate_post thread has finished
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:05,039 | DEBUG | job | pilot.control.job | control | job control ending since graceful_stop has been set
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:05,039 | DEBUG | job | pilot.control.job | control | [job] control thread has finished
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:05,039 | DEBUG | payload | pilot.control.payload | control | payload control ending since graceful_stop has been set
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:05,039 | DEBUG | payload | pilot.control.payload | control | [payload] control thread has finished
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:05,125 | INFO | monitor | pilot.control.monitor | control | [monitor] control thread has ended
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:05,250 | INFO | execute_payloads | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:05,284 | DEBUG | validate | pilot.control.job | validate | [job] validate thread has finished
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:05,284 | DEBUG | create_data_payload | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:05,284 | INFO | validate_pre | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:05,339 | DEBUG | MainThread | pilot.workflow.generic | run | thread count now at 7 threads
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:05,340 | DEBUG | MainThread | pilot.workflow.generic | run | enumerate: [<_MainThread(MainThread, started 140456870504256)>, <ExcThread(queue_monitoring, started 140456657991424)>, <ExcThread(job_monitor, started 140456134424320)>, <ExcThread(failed_post, started 140456126031616)>, <ExcThread(queue_monitor, started 140456117638912)>, <ExcThread(copytool_in, started 140456151209728)>, <ExcThread(copytool_out, started 140456683169536)>]
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:05,624 | DEBUG | copytool_in | pilot.control.data | copytool_in | [data] copytool_in thread has finished
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:05,724 | DEBUG | copytool_out | pilot.control.data | copytool_out | [data] copytool_out thread has finished
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:06,319 | INFO | failed_post | pilot.control.payload | failed_post | [payload] failed_post thread has finished
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:06,835 | DEBUG | MainThread | pilot.workflow.generic | run | thread count now at 4 threads
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:06,835 | DEBUG | MainThread | pilot.workflow.generic | run | enumerate: [<_MainThread(MainThread, started 140456870504256)>, <ExcThread(queue_monitoring, started 140456657991424)>, <ExcThread(job_monitor, started 140456134424320)>, <ExcThread(queue_monitor, started 140456117638912)>]
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:07,291 | WARNING | queue_monitor | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:07,291 | DEBUG | queue_monitor | pilot.control.job | queue_monitor | [job] queue monitor thread has finished
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:07,841 | DEBUG | MainThread | pilot.workflow.generic | run | thread count now at 3 threads
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:07,841 | DEBUG | MainThread | pilot.workflow.generic | run | enumerate: [<_MainThread(MainThread, started 140456870504256)>, <ExcThread(queue_monitoring, started 140456657991424)>, <ExcThread(job_monitor, started 140456134424320)>]
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:07,847 | WARNING | queue_monitoring | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:10,850 | DEBUG | queue_monitoring | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:10,857 | DEBUG | MainThread | pilot.workflow.generic | run | thread count now at 2 threads
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:10,857 | DEBUG | MainThread | pilot.workflow.generic | run | enumerate: [<_MainThread(MainThread, started 140456870504256)>, <ExcThread(job_monitor, started 140456134424320)>]
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:42,201 | WARNING | job_monitor | pilot.control.job | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 74 s)
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:42,201 | DEBUG | job_monitor | pilot.control.job | job_monitor | [job] job monitor thread has finished
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:42,498 | INFO | MainThread | pilot.workflow.generic | run | end of generic workflow (traces error code: 0)
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:42,498 | INFO | MainThread | root | wrap_up | traces error code: 0
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:42,499 | INFO | MainThread | root | wrap_up | pilot has finished
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:42 UTC [wrapper] ==== pilot stdout END ====
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:42 UTC [wrapper] ==== wrapper stdout RESUME ====
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:42 UTC [wrapper] Pilot exit status: 0
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:42 UTC [wrapper] STATUSCODE: 0
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:42 UTC [wrapper] apfmon messages muted
do 12 dec 2019 19:36:44 CET: ---- find pandaID.out ----
do 12 dec 2019 19:36:44 CET: total 64
do 12 dec 2019 19:36:44 CET: -rw------- 1 boinc boinc 11357 Jul 25 16:38 LICENSE
do 12 dec 2019 19:36:44 CET: -rw------- 1 boinc boinc 20 Sep 9 13:04 MANIFEST.IN
do 12 dec 2019 19:36:44 CET: -rw------- 1 boinc boinc 8 Dec 2 11:02 PILOTVERSION
do 12 dec 2019 19:36:44 CET: -rw------- 1 boinc boinc 2212 Nov 14 11:01 README.md
do 12 dec 2019 19:36:44 CET: -rw------- 1 boinc boinc 221 Jul 25 16:38 TODO.md
do 12 dec 2019 19:36:44 CET: -rw------- 1 boinc boinc 11 Dec 12 19:01 pandaIDs.out
do 12 dec 2019 19:36:44 CET: drwx------ 14 boinc boinc 4096 Dec 12 19:01 pilot
do 12 dec 2019 19:36:44 CET: -rwx------ 1 boinc boinc 20750 Dec 2 11:02 pilot.py
do 12 dec 2019 19:36:44 CET: -rw------- 1 boinc boinc 766 Oct 10 16:01 setup.py
do 12 dec 2019 19:36:44 CET: -rw------- 1 boinc boinc 11 Dec 12 19:01 /var/lib/boinc-client/slots/4/pilot2/pandaIDs.out
do 12 dec 2019 19:36:44 CET: 4002876565
do 12 dec 2019 19:36:44 CET:
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:42 UTC [wrapper] Test setup, not cleaning
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:42 UTC [wrapper] ==== wrapper stdout END ====
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:42 UTC [wrapper] ==== wrapper stderr END ====
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:42 UTC [wrapper] wrapper wrapperexiting ec=0, duration=2159
do 12 dec 2019 19:36:44 CET: 2019-12-12 18:36:42 UTC [wrapper] apfmon messages muted
do 12 dec 2019 19:36:44 CET: *** Error codes and diagnostics ***
do 12 dec 2019 19:36:44 CET: "exeErrorCode": 0,
do 12 dec 2019 19:36:44 CET: "exeErrorDiag": "",
do 12 dec 2019 19:36:44 CET: "pilotErrorCode": 0,
do 12 dec 2019 19:36:44 CET: "pilotErrorDiag": "",
do 12 dec 2019 19:36:44 CET: *** Listing of results directory ***
do 12 dec 2019 19:36:44 CET: total 378924
do 12 dec 2019 19:36:44 CET: -rw-r--r-- 1 boinc boinc 266835 dec 12 13:26 pilot2.tar.gz
do 12 dec 2019 19:36:44 CET: -rw-r--r-- 1 boinc boinc 4492 dec 12 13:46 queuedata.json
do 12 dec 2019 19:36:44 CET: -rwx------ 1 boinc boinc 12641 dec 12 13:49 runpilot2-wrapper.sh
do 12 dec 2019 19:36:44 CET: -rw------- 1 boinc boinc 2958 dec 12 13:49 pandaJobData.out
do 12 dec 2019 19:36:44 CET: -rw-r--r-- 1 boinc boinc 107 dec 12 18:56 wrapper_26015_x86_64-pc-linux-gnu
do 12 dec 2019 19:36:44 CET: -rwxr-xr-x 1 boinc boinc 4813 dec 12 18:56 run_atlas
do 12 dec 2019 19:36:44 CET: -rw-r--r-- 1 boinc boinc 112 dec 12 18:56 job.xml
do 12 dec 2019 19:36:44 CET: drwxrwx--x 2 boinc boinc 4096 dec 12 18:56 shared
do 12 dec 2019 19:36:44 CET: -rw-r--r-- 1 boinc boinc 0 dec 12 18:56 boinc_lockfile
do 12 dec 2019 19:36:44 CET: -rw-r--r-- 1 boinc boinc 365251149 dec 12 18:59 EVNT.14296418._001447.pool.root.1
do 12 dec 2019 19:36:44 CET: -rw-r--r-- 1 boinc boinc 275014 dec 12 18:59 input.tar.gz
do 12 dec 2019 19:36:44 CET: -rw-r--r-- 1 boinc boinc 815 dec 12 18:59 RTE.tar.gz
do 12 dec 2019 19:36:44 CET: -rw-r--r-- 1 boinc boinc 8541 dec 12 18:59 start_atlas.sh
do 12 dec 2019 19:36:44 CET: drwxr-xr-x 3 boinc boinc 4096 dec 12 19:00 APPS
do 12 dec 2019 19:36:44 CET: -rw------- 1 boinc boinc 3742511 dec 12 19:01 agis_schedconf.cvmfs.json
do 12 dec 2019 19:36:44 CET: -rw------- 1 boinc boinc 7755224 dec 12 19:01 agis_ddmendpoints.json
do 12 dec 2019 19:36:44 CET: drwx------ 3 boinc boinc 4096 dec 12 19:01 pilot2
do 12 dec 2019 19:36:44 CET: -rw-r--r-- 1 boinc boinc 5877 dec 12 19:22 init_data.xml
do 12 dec 2019 19:36:44 CET: -rw-r--r-- 1 boinc boinc 535 dec 12 19:28 boinc_task_state.xml
do 12 dec 2019 19:36:44 CET: -rw------- 1 boinc boinc 9100606 dec 12 19:35 HITS.000649-3918820-23650._078090.pool.root.1
do 12 dec 2019 19:36:44 CET: -rw------- 1 boinc boinc 786 dec 12 19:35 memory_monitor_summary.json
do 12 dec 2019 19:36:44 CET: -rw------- 1 boinc boinc 507210 dec 12 19:36 log.000649-3918820-23650._078090.job.log.tgz.1
do 12 dec 2019 19:36:44 CET: -rw------- 1 boinc boinc 10986 dec 12 19:36 heartbeat.json
do 12 dec 2019 19:36:44 CET: -rw-r--r-- 1 boinc boinc 8192 dec 12 19:36 boinc_mmap_file
do 12 dec 2019 19:36:44 CET: -rw-r--r-- 1 boinc boinc 26 dec 12 19:36 wrapper_checkpoint.txt
do 12 dec 2019 19:36:44 CET: -rw------- 1 boinc boinc 8188 dec 12 19:36 pilotlog.txt
do 12 dec 2019 19:36:44 CET: -rw------- 1 boinc boinc 212230 dec 12 19:36 log.000649-3918820-23650._078090.job.log.1
do 12 dec 2019 19:36:44 CET: -rw------- 1 boinc boinc 500 dec 12 19:36 aVCLDml5czvnShfckohDCDFpABFKDmABFKDmyiALDm8CFKDm7Ccs4m.diag
do 12 dec 2019 19:36:44 CET: -rw------- 1 boinc boinc 499 dec 12 19:36 output.list
do 12 dec 2019 19:36:44 CET: -rw-r--r-- 1 boinc boinc 742 dec 12 19:36 runtime_log
do 12 dec 2019 19:36:44 CET: -rw------- 1 boinc boinc 737280 dec 12 19:36 result.tar.gz
do 12 dec 2019 19:36:44 CET: -rw-r--r-- 1 boinc boinc 7477 dec 12 19:36 runtime_log.err
do 12 dec 2019 19:36:44 CET: -rw-r--r-- 1 boinc boinc 3464 dec 12 19:36 stderr.txt
do 12 dec 2019 19:36:44 CET: HITS file was successfully produced:
do 12 dec 2019 19:36:44 CET: -rw------- 1 boinc boinc 9100606 dec 12 19:35 shared/HITS.pool.root.1
do 12 dec 2019 19:36:44 CET: *** Contents of shared directory: ***
do 12 dec 2019 19:36:44 CET: total 366592
do 12 dec 2019 19:36:44 CET: -rw-r--r-- 1 boinc boinc 8513 dec 12 18:56 start_atlas.sh
do 12 dec 2019 19:36:44 CET: -rw-r--r-- 1 boinc boinc 815 dec 12 18:56 RTE.tar.gz
do 12 dec 2019 19:36:44 CET: -rw-r--r-- 1 boinc boinc 275014 dec 12 18:56 input.tar.gz
do 12 dec 2019 19:36:44 CET: -rw-r--r-- 1 boinc boinc 365251149 dec 12 18:56 ATLAS.root_0
do 12 dec 2019 19:36:44 CET: -rw------- 1 boinc boinc 9100606 dec 12 19:35 HITS.pool.root.1
do 12 dec 2019 19:36:44 CET: -rw------- 1 boinc boinc 737280 dec 12 19:36 result.tar.gz
19:36:45 (6873): run_atlas exited; CPU time 2910.114070
19:36:45 (6873): called boinc_finish(0)
</stderr_txt>
]]>
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