| Name | eKPODmcEyzvnShfckohDCDFpABFKDmABFKDmyiALDmLDFKDmu4faOn_0 |
| Workunit | 1960570 |
| Created | 13 Dec 2019, 11:24:32 UTC |
| Sent | 13 Dec 2019, 16:22:27 UTC |
| Report deadline | 20 Dec 2019, 16:22:27 UTC |
| Received | 13 Dec 2019, 17:12:28 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 4056 |
| Run time | 24 min 44 sec |
| CPU time | 32 min 54 sec |
| Validate state | Valid |
| Credit | 20.07 |
| Device peak FLOPS | 5.84 GFLOPS |
| Application version | ATLAS Simulation v0.93 (native_mt) x86_64-pc-linux-gnu |
| Peak working set size | 1.93 GB |
| Peak swap size | 2.62 GB |
| Peak disk usage | 719.55 MB |
Stderr output
<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:22:39 (29090): wrapper (7.7.26015): starting
16:22:39 (29090): wrapper: running run_atlas (--nthreads 2)
Fri Dec 13 16:22:39 UTC 2019: Using singularity image /cvmfs/atlas.cern.ch/repo/containers/images/singularity/x86_64-centos7.img
Fri Dec 13 16:22:39 UTC 2019: Arguments: --nthreads 2
Fri Dec 13 16:22:39 UTC 2019: Threads: 2
Fri Dec 13 16:22:39 UTC 2019: Checking for CVMFS
Fri Dec 13 16:22:48 UTC 2019: Probing /cvmfs/atlas.cern.ch... OK
Fri Dec 13 16:22:54 UTC 2019: Probing /cvmfs/atlas-condb.cern.ch... OK
Fri Dec 13 16:23:01 UTC 2019: Probing /cvmfs/grid.cern.ch... OK
Fri Dec 13 16:23:03 UTC 2019: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
Fri Dec 13 16:23:03 UTC 2019: 2.7.0.0 75 301 53380 57924 2 62 2084539 4096000 1 65024 0 181386 97.4397 1105441 8548 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
Fri Dec 13 16:23:03 UTC 2019: CVMFS is ok
Fri Dec 13 16:23:03 UTC 2019: Checking for singularity binary...
Fri Dec 13 16:23:03 UTC 2019: which: no singularity in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin)
Fri Dec 13 16:23:03 UTC 2019: Singularity is not installed, using version from CVMFS
Fri Dec 13 16:23:03 UTC 2019: Checking singularity works with /cvmfs/atlas.cern.ch/repo/containers/sw/singularity/x86_64-el7/current/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/images/singularity/x86_64-centos7.img hostname
Fri Dec 13 16:23:13 UTC 2019: [34mINFO: [0m Convert SIF file to sandbox... f5bb0f4529ab [34mINFO: [0m Cleaning up image...
Fri Dec 13 16:23:13 UTC 2019: Singularity works
Fri Dec 13 16:23:13 UTC 2019: Set ATHENA_PROC_NUMBER=2
Fri Dec 13 16:23:13 UTC 2019: Starting ATLAS job with PandaID=4002876565
Fri Dec 13 16:23:13 UTC 2019: Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/singularity/x86_64-el7/current/bin/singularity exec --pwd /slots/0 -B /cvmfs,/slots /cvmfs/atlas.cern.ch/repo/containers/images/singularity/x86_64-centos7.img sh start_atlas.sh
Fri Dec 13 16:47:20 UTC 2019: *** The last 200 lines of the pilot log: ***
Fri Dec 13 16:47:20 UTC 2019: }
Fri Dec 13 16:47:20 UTC 2019: },
Fri Dec 13 16:47:20 UTC 2019: "postExe": {
Fri Dec 13 16:47:20 UTC 2019: "cpuTime": 1,
Fri Dec 13 16:47:20 UTC 2019: "wallTime": 1
Fri Dec 13 16:47:20 UTC 2019: },
Fri Dec 13 16:47:20 UTC 2019: "preExe": {
Fri Dec 13 16:47:20 UTC 2019: "cpuTime": 1,
Fri Dec 13 16:47:20 UTC 2019: "wallTime": 3
Fri Dec 13 16:47:20 UTC 2019: },
Fri Dec 13 16:47:20 UTC 2019: "total": {
Fri Dec 13 16:47:20 UTC 2019: "cpuTime": 62,
Fri Dec 13 16:47:20 UTC 2019: "wallTime": 111
Fri Dec 13 16:47:20 UTC 2019: },
Fri Dec 13 16:47:20 UTC 2019: "validation": {
Fri Dec 13 16:47:20 UTC 2019: "cpuTime": 0,
Fri Dec 13 16:47:20 UTC 2019: "wallTime": 0
Fri Dec 13 16:47:20 UTC 2019: },
Fri Dec 13 16:47:20 UTC 2019: "wallTime": 107
Fri Dec 13 16:47:20 UTC 2019: }
Fri Dec 13 16:47:20 UTC 2019: },
Fri Dec 13 16:47:20 UTC 2019: "machine": {
Fri Dec 13 16:47:20 UTC 2019: "cpu_family": "6",
Fri Dec 13 16:47:20 UTC 2019: "linux_distribution": [
Fri Dec 13 16:47:20 UTC 2019: "CentOS Linux",
Fri Dec 13 16:47:20 UTC 2019: "7.6.1810",
Fri Dec 13 16:47:20 UTC 2019: "Core"
Fri Dec 13 16:47:20 UTC 2019: ],
Fri Dec 13 16:47:20 UTC 2019: "model": "61",
Fri Dec 13 16:47:20 UTC 2019: "model_name": "Intel Core Processor (Broadwell, IBRS)",
Fri Dec 13 16:47:20 UTC 2019: "node": "f5bb0f4529ab",
Fri Dec 13 16:47:20 UTC 2019: "platform": "Linux-3.10.0-1062.9.1.el7.x86_64-x86_64-with-centos-7.6.1810-Core"
Fri Dec 13 16:47:20 UTC 2019: },
Fri Dec 13 16:47:20 UTC 2019: "transform": {
Fri Dec 13 16:47:20 UTC 2019: "cpuEfficiency": 0.7568,
Fri Dec 13 16:47:20 UTC 2019: "cpuPWEfficiency": 0.7824,
Fri Dec 13 16:47:20 UTC 2019: "cpuTime": 6,
Fri Dec 13 16:47:20 UTC 2019: "cpuTimeTotal": 2013,
Fri Dec 13 16:47:20 UTC 2019: "externalCpuTime": 10,
Fri Dec 13 16:47:20 UTC 2019: "processedEvents": 10,
Fri Dec 13 16:47:20 UTC 2019: "trfPredata": null,
Fri Dec 13 16:47:20 UTC 2019: "wallTime": 1287
Fri Dec 13 16:47:20 UTC 2019: }
Fri Dec 13 16:47:20 UTC 2019: }
Fri Dec 13 16:47:20 UTC 2019: }
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,458 | DEBUG | queue_monitor | pilot.util.auxiliary.4002876565 | update_server | xml:will send fileinfo
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,458 | DEBUG | queue_monitor | pilot.control.job | get_proper_state | state=finished
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,458 | DEBUG | queue_monitor | pilot.control.job | get_proper_state | serverstate=running
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,458 | DEBUG | queue_monitor | pilot.control.job | get_proper_state | serverstate=finished
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,459 | INFO | queue_monitor | pilot.control.job.4002876565 | send_state | pilot will not update the server (heartbeat message will be written to file)
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,459 | INFO | queue_monitor | pilot.control.job.4002876565 | send_state | job 4002876565 has finished - writing final server update
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,459 | DEBUG | queue_monitor | pilot.control.job.4002876565 | get_data_structure | building data structure to be sent to server with heartbeat
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,459 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | get_job_metrics | will not add max space = -353135181 B to job metrics
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,459 | DEBUG | queue_monitor | pilot.util.auxiliary.4002876565 | get_job_metrics | job metrics="coreCount=2 actualCoreCount=2 nEvents=10"
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,459 | INFO | queue_monitor | pilot.control.job.4002876565 | get_data_structure | total number of processed events: 10 (read)
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,460 | INFO | queue_monitor | pilot.user.atlas.utilities | get_memory_monitor_info_path | neither /slots/0/PanDA_Pilot-4002876565/memory_monitor_summary.json, nor /slots/0/memory_monitor_summary.json exist
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,461 | WARNING | queue_monitor | pilot.user.atlas.utilities | get_memory_monitor_info_path | file does not exist either: /slots/0/PanDA_Pilot-4002876565/memory_monitor_output.txt
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,461 | DEBUG | queue_monitor | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={}
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,461 | INFO | queue_monitor | pilot.user.atlas.utilities | get_memory_monitor_info | memory summary dictionary not yet available
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,461 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | ..............................
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,461 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . Timing measurements:
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,461 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . get job = 0 s
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,461 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . initial setup = 1 s
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,461 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . payload setup = 0 s
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,461 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . total setup = 1 s
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,461 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . stage-in = 0 s
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,461 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . payload execution = 1340 s
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,461 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . stage-out = 2 s
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,462 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | ..............................
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,462 | DEBUG | queue_monitor | pilot.control.job.4002876565 | send_state | wrote heartbeat to file /slots/0/heartbeat.json
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,462 | DEBUG | queue_monitor | pilot.control.job | queue_monitor | job 4002876565 was dequeued from the monitored payloads queue
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,462 | DEBUG | queue_monitor | pilot.control.job | queue_monitor | tmp job object deleted
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,503 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report |
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,503 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | job summary report
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,503 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | --------------------------------------------------
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,503 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | PanDA job id: 4002876565
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,503 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | task id: 000649-40124-7290
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,503 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | errors: (none)
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,504 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | status: LOG_TRANSFER = DONE
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,504 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | pilot state: finished
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,504 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | transexitcode: 0
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,504 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | exeerrorcode: 0
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,504 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | exeerrordiag:
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,504 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | exitcode: 0
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,504 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | exitmsg: OK
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,504 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | cpuconsumptiontime: 1997 s
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,504 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | nevents: 10
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,504 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | neventsw: 0
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,504 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | pid: 3056
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,504 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | pgrp: 3056
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,504 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | corecount: 2
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,504 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | event service: False
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,504 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | --------------------------------------------------
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,504 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report |
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,504 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue jobs has 0 job(s)
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,505 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue payloads has 0 job(s)
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,505 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue data_in has 0 job(s)
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,505 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue data_out has 0 job(s)
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,505 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue current_data_in has 0 job(s)
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,505 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue validated_jobs has 0 job(s)
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,505 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue validated_payloads has 0 job(s)
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,505 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue monitored_payloads has 0 job(s)
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,505 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue finished_jobs has 0 job(s)
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,505 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue finished_payloads has 0 job(s)
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,505 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue finished_data_in has 1 job(s)
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,505 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue finished_data_out has 0 job(s)
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,505 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue failed_jobs has 0 job(s)
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,505 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue failed_payloads has 0 job(s)
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,506 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue failed_data_in has 0 job(s)
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,506 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue failed_data_out has 0 job(s)
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,506 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue completed_jobs has 0 job(s)
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,506 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s)
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,506 | INFO | retrieve | pilot.control.job.4002876565 | has_job_completed | job 4002876565 has completed (purged errors)
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,506 | INFO | retrieve | pilot.util.processes | cleanup | overall cleanup function is called
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:08,515 | DEBUG | retrieve | pilot.util.processes | cleanup | work directory was removed: /slots/0/PanDA_Pilot-4002876565
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:09,516 | INFO | retrieve | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [3056]
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:09,516 | INFO | retrieve | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 3056
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:09,516 | INFO | retrieve | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:10,522 | INFO | retrieve | pilot.util.processes | cleanup | collected zombie processes
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:10,522 | INFO | retrieve | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=3056
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:10,565 | INFO | retrieve | pilot.util.processes | kill_processes | process IDs to be killed: [3056] (in reverse order)
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:10,593 | WARNING | retrieve | pilot.util.processes | kill_processes | found no corresponding commands to process id(s)
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:10,593 | INFO | retrieve | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:10,594 | INFO | retrieve | pilot.control.job | retrieve | ready for new job
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:10,594 | INFO | retrieve | root | retrieve | pilot has finished for previous job - re-establishing logging
Fri Dec 13 16:47:20 UTC 2019: mpi4py not found
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:10,599 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner | ****************************************
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:10,599 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 2.3.4 (12) ***
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:10,599 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner | ****************************************
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:10,599 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner |
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:10,599 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner | pilot is running in a VM
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:10,599 | INFO | retrieve | pilot.util.auxiliary | display_architecture_info | architecture information:
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:10,673 | INFO | retrieve | pilot.util.auxiliary | display_architecture_info |
Fri Dec 13 16:47:20 UTC 2019: LSB Version: :core-4.1-amd64:core-4.1-noarch
Fri Dec 13 16:47:20 UTC 2019: Distributor ID: CentOS
Fri Dec 13 16:47:20 UTC 2019: Description: CentOS Linux release 7.6.1810 (Core)
Fri Dec 13 16:47:20 UTC 2019: Release: 7.6.1810
Fri Dec 13 16:47:20 UTC 2019: Codename: Core
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:10,673 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner | ****************************************
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:11,176 | DEBUG | retrieve | pilot.util.monitoring | check_local_space | checking local space on /slots/0
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:11,194 | INFO | retrieve | pilot.util.monitoring | check_local_space | sufficient remaining disk space (20544749568 B)
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:11,194 | WARNING | retrieve | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:11,195 | DEBUG | retrieve | pilot.control.job | retrieve | [job] retrieve thread has finished
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:11,283 | DEBUG | validate | pilot.control.job | validate | [job] validate thread has finished
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:11,287 | DEBUG | create_data_payload | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:11,303 | WARNING | copytool_out | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:11,432 | DEBUG | MainThread | pilot.workflow.generic | run | thread count now at 14 threads
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:11,433 | DEBUG | MainThread | pilot.workflow.generic | run | enumerate: [<_MainThread(MainThread, started 140589293356864)>, <ExcThread(job, started 140589130372864)>, <ExcThread(execute_payloads, started 140588456318720)>, <ExcThread(job_monitor, started 140588498282240)>, <ExcThread(queue_monitor, started 140588481496832)>, <ExcThread(payload, started 140589018367744)>, <ExcThread(queue_monitoring, started 140588506674944)>, <ExcThread(data, started 140589043545856)>, <ExcThread(validate_pre, started 140589001582336)>, <ExcThread(validate_post, started 140588489889536)>, <ExcThread(copytool_in, started 140588473104128)>, <ExcThread(monitor, started 140588993189632)>, <ExcThread(copytool_out, started 140589035153152)>, <ExcThread(failed_post, started 140588464711424)>]
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:11,513 | INFO | validate_post | pilot.control.payload | validate_post | [payload] validate_post thread has finished
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:11,614 | INFO | validate_pre | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:11,619 | INFO | monitor | pilot.control.monitor | control | [monitor] control thread has ended
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:11,633 | DEBUG | data | pilot.control.data | control | data control ending since graceful_stop has been set
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:11,633 | DEBUG | data | pilot.control.data | control | [data] control thread has finished
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:11,734 | DEBUG | payload | pilot.control.payload | control | payload control ending since graceful_stop has been set
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:11,734 | DEBUG | payload | pilot.control.payload | control | [payload] control thread has finished
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:11,878 | DEBUG | copytool_in | pilot.control.data | copytool_in | [data] copytool_in thread has finished
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:12,236 | DEBUG | job | pilot.control.job | control | job control ending since graceful_stop has been set
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:12,237 | DEBUG | job | pilot.control.job | control | [job] control thread has finished
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:12,246 | INFO | execute_payloads | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:12,303 | DEBUG | copytool_out | pilot.control.data | copytool_out | [data] copytool_out thread has finished
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:12,385 | INFO | failed_post | pilot.control.payload | failed_post | [payload] failed_post thread has finished
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:12,434 | DEBUG | MainThread | pilot.workflow.generic | run | thread count now at 4 threads
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:12,434 | DEBUG | MainThread | pilot.workflow.generic | run | enumerate: [<_MainThread(MainThread, started 140589293356864)>, <ExcThread(job_monitor, started 140588498282240)>, <ExcThread(queue_monitor, started 140588481496832)>, <ExcThread(queue_monitoring, started 140588506674944)>]
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:13,474 | WARNING | queue_monitor | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:13,474 | DEBUG | queue_monitor | pilot.control.job | queue_monitor | [job] queue monitor thread has finished
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:14,434 | WARNING | queue_monitoring | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:14,445 | DEBUG | MainThread | pilot.workflow.generic | run | thread count now at 3 threads
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:14,445 | DEBUG | MainThread | pilot.workflow.generic | run | enumerate: [<_MainThread(MainThread, started 140589293356864)>, <ExcThread(job_monitor, started 140588498282240)>, <ExcThread(queue_monitoring, started 140588506674944)>]
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:16,103 | WARNING | job_monitor | pilot.control.job | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 62 s)
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:16,103 | DEBUG | job_monitor | pilot.control.job | job_monitor | [job] job monitor thread has finished
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:16,456 | DEBUG | MainThread | pilot.workflow.generic | run | thread count now at 2 threads
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:16,456 | DEBUG | MainThread | pilot.workflow.generic | run | enumerate: [<_MainThread(MainThread, started 140589293356864)>, <ExcThread(queue_monitoring, started 140588506674944)>]
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:17,435 | DEBUG | queue_monitoring | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:17,461 | INFO | MainThread | pilot.workflow.generic | run | end of generic workflow (traces error code: 0)
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:17,462 | INFO | MainThread | root | wrap_up | traces error code: 0
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:17,462 | INFO | MainThread | root | wrap_up | pilot has finished
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:17 UTC [wrapper] ==== pilot stdout END ====
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:17 UTC [wrapper] ==== wrapper stdout RESUME ====
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:17 UTC [wrapper] Pilot exit status: 0
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:17 UTC [wrapper] STATUSCODE: 0
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:17 UTC [wrapper] apfmon messages muted
Fri Dec 13 16:47:20 UTC 2019: ---- find pandaID.out ----
Fri Dec 13 16:47:20 UTC 2019: total 60
Fri Dec 13 16:47:20 UTC 2019: -rw-rw-r--. 1 root root 11357 Jul 25 14:38 LICENSE
Fri Dec 13 16:47:20 UTC 2019: -rw-r--r--. 1 root root 20 Sep 9 11:04 MANIFEST.IN
Fri Dec 13 16:47:20 UTC 2019: -rw-r--r--. 1 root root 8 Dec 12 18:00 PILOTVERSION
Fri Dec 13 16:47:20 UTC 2019: -rw-r--r--. 1 root root 2212 Nov 14 10:01 README.md
Fri Dec 13 16:47:20 UTC 2019: -rw-rw-r--. 1 root root 221 Jul 25 14:38 TODO.md
Fri Dec 13 16:47:20 UTC 2019: -rw-------. 1 root root 11 Dec 13 16:23 pandaIDs.out
Fri Dec 13 16:47:20 UTC 2019: drwxrwxr-x. 14 root root 216 Dec 13 16:23 pilot
Fri Dec 13 16:47:20 UTC 2019: -rwxr-xr-x. 1 root root 21225 Dec 12 18:00 pilot.py
Fri Dec 13 16:47:20 UTC 2019: -rw-r--r--. 1 root root 766 Oct 10 14:01 setup.py
Fri Dec 13 16:47:20 UTC 2019: -rw-------. 1 root root 11 Dec 13 16:23 /slots/0/pilot2/pandaIDs.out
Fri Dec 13 16:47:20 UTC 2019: 4002876565
Fri Dec 13 16:47:20 UTC 2019:
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:17 UTC [wrapper] Test setup, not cleaning
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:17 UTC [wrapper] ==== wrapper stdout END ====
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:17 UTC [wrapper] ==== wrapper stderr END ====
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:17 UTC [wrapper] wrapper wrapperexiting ec=0, duration=1438
16:47:20 (29090): run_atlas exited; CPU time 1974.722483
16:47:20 (29090): called boinc_finish(0)
Fri Dec 13 16:47:20 UTC 2019: 2019-12-13 16:47:17 UTC [wrapper] apfmon messages muted
Fri Dec 13 16:47:20 UTC 2019: *** Error codes and diagnostics ***
Fri Dec 13 16:47:20 UTC 2019: "exeErrorCode": 0,
Fri Dec 13 16:47:20 UTC 2019: "exeErrorDiag": "",
Fri Dec 13 16:47:20 UTC 2019: "pilotErrorCode": 0,
Fri Dec 13 16:47:20 UTC 2019: "pilotErrorDiag": "",
Fri Dec 13 16:47:20 UTC 2019: *** Listing of results directory ***
Fri Dec 13 16:47:20 UTC 2019: total 379000
Fri Dec 13 16:47:20 UTC 2019: -rw-r--r--. 1 root root 267260 Dec 13 10:26 pilot2.tar.gz
Fri Dec 13 16:47:20 UTC 2019: -rw-r--r--. 1 root root 4492 Dec 13 11:20 queuedata.json
Fri Dec 13 16:47:20 UTC 2019: -rwx------. 1 root root 12641 Dec 13 11:24 runpilot2-wrapper.sh
Fri Dec 13 16:47:20 UTC 2019: -rw-r--r--. 1 root root 107 Dec 13 16:22 wrapper_26015_x86_64-pc-linux-gnu
Fri Dec 13 16:47:20 UTC 2019: -rwxr-xr-x. 1 root root 4925 Dec 13 16:22 run_atlas
Fri Dec 13 16:47:20 UTC 2019: -rw-r--r--. 1 root root 112 Dec 13 16:22 job.xml
Fri Dec 13 16:47:20 UTC 2019: -rw-r--r--. 1 root root 5850 Dec 13 16:22 init_data.xml
Fri Dec 13 16:47:20 UTC 2019: drwxrwx--x. 2 root root 86 Dec 13 16:22 shared
Fri Dec 13 16:47:20 UTC 2019: -rw-r--r--. 1 root root 0 Dec 13 16:22 boinc_lockfile
Fri Dec 13 16:47:21 UTC 2019: -rw-r--r--. 1 root root 365251149 Dec 13 16:23 EVNT.14296418._001447.pool.root.1
Fri Dec 13 16:47:21 UTC 2019: -rw-r--r--. 1 root root 275419 Dec 13 16:23 input.tar.gz
Fri Dec 13 16:47:21 UTC 2019: -rw-r--r--. 1 root root 815 Dec 13 16:23 RTE.tar.gz
Fri Dec 13 16:47:21 UTC 2019: -rw-r--r--. 1 root root 2928 Dec 13 16:23 pandaJob.out
Fri Dec 13 16:47:21 UTC 2019: -rw-r--r--. 1 root root 8529 Dec 13 16:23 start_atlas.sh
Fri Dec 13 16:47:21 UTC 2019: drwxr-xr-x. 3 root root 17 Dec 13 16:23 APPS
Fri Dec 13 16:47:21 UTC 2019: -rw-------. 1 root root 3749706 Dec 13 16:23 agis_schedconf.cvmfs.json
Fri Dec 13 16:47:21 UTC 2019: -rw-------. 1 root root 7764764 Dec 13 16:23 agis_ddmendpoints.json
Fri Dec 13 16:47:21 UTC 2019: drwxr-xr-x. 3 root root 229 Dec 13 16:23 pilot2
Fri Dec 13 16:47:21 UTC 2019: -rw-r--r--. 1 root root 535 Dec 13 16:41 boinc_task_state.xml
Fri Dec 13 16:47:21 UTC 2019: -rw-------. 1 root root 9166366 Dec 13 16:45 HITS.000649-40124-7290._078090.pool.root.1
Fri Dec 13 16:47:21 UTC 2019: -rw-------. 1 root root 511995 Dec 13 16:47 log.000649-40124-7290._078090.job.log.tgz.1
Fri Dec 13 16:47:21 UTC 2019: -rw-------. 1 root root 14721 Dec 13 16:47 heartbeat.json
Fri Dec 13 16:47:21 UTC 2019: -rw-r--r--. 1 root root 8192 Dec 13 16:47 boinc_mmap_file
Fri Dec 13 16:47:21 UTC 2019: -rw-r--r--. 1 root root 26 Dec 13 16:47 wrapper_checkpoint.txt
Fri Dec 13 16:47:21 UTC 2019: -rw-------. 1 root root 8516 Dec 13 16:47 pilotlog.txt
Fri Dec 13 16:47:21 UTC 2019: -rw-------. 1 root root 205134 Dec 13 16:47 log.000649-40124-7290._078090.job.log.1
Fri Dec 13 16:47:21 UTC 2019: -rw-------. 1 root root 502 Dec 13 16:47 eKPODmcEyzvnShfckohDCDFpABFKDmABFKDmyiALDmLDFKDmu4faOn.diag
Fri Dec 13 16:47:21 UTC 2019: -rw-------. 1 root root 490 Dec 13 16:47 output.list
Fri Dec 13 16:47:21 UTC 2019: -rw-r--r--. 1 root root 733 Dec 13 16:47 runtime_log
Fri Dec 13 16:47:21 UTC 2019: -rw-------. 1 root root 747520 Dec 13 16:47 result.tar.gz
Fri Dec 13 16:47:21 UTC 2019: -rw-r--r--. 1 root root 7068 Dec 13 16:47 runtime_log.err
Fri Dec 13 16:47:21 UTC 2019: -rw-r--r--. 1 root root 2339 Dec 13 16:47 stderr.txt
Fri Dec 13 16:47:21 UTC 2019: HITS file was successfully produced:
Fri Dec 13 16:47:21 UTC 2019: -rw-------. 1 root root 9166366 Dec 13 16:45 shared/HITS.pool.root.1
Fri Dec 13 16:47:21 UTC 2019: *** Contents of shared directory: ***
Fri Dec 13 16:47:21 UTC 2019: total 366664
Fri Dec 13 16:47:21 UTC 2019: -rw-r--r--. 1 root root 365251149 Dec 13 16:22 ATLAS.root_0
Fri Dec 13 16:47:21 UTC 2019: -rw-r--r--. 1 root root 8501 Dec 13 16:22 start_atlas.sh
Fri Dec 13 16:47:21 UTC 2019: -rw-r--r--. 1 root root 275419 Dec 13 16:22 input.tar.gz
Fri Dec 13 16:47:21 UTC 2019: -rw-r--r--. 1 root root 815 Dec 13 16:22 RTE.tar.gz
Fri Dec 13 16:47:21 UTC 2019: -rw-------. 1 root root 9166366 Dec 13 16:45 HITS.pool.root.1
Fri Dec 13 16:47:21 UTC 2019: -rw-------. 1 root root 747520 Dec 13 16:47 result.tar.gz
</stderr_txt>
]]>
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