| Name | 2SDMDm6TU1vnShfckohDCDFpABFKDmABFKDmyiALDmZDFKDm7K5BJo_1 |
| Workunit | 1962135 |
| Created | 19 Dec 2019, 1:29:35 UTC |
| Sent | 19 Dec 2019, 13:43:41 UTC |
| Report deadline | 26 Dec 2019, 13:43:41 UTC |
| Received | 19 Dec 2019, 13:58:01 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 4063 |
| Run time | 13 min 30 sec |
| CPU time | 25 min 22 sec |
| Validate state | Valid |
| Credit | 7.51 |
| Device peak FLOPS | 4.00 GFLOPS |
| Application version | ATLAS Simulation v0.98 (native_mt) x86_64-pc-linux-gnu |
| Peak working set size | 1.80 GB |
| Peak swap size | 2.55 GB |
| Peak disk usage | 723.79 MB |
Stderr output
<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:43:54 (233): wrapper (7.7.26015): starting
13:43:54 (233): wrapper: running run_atlas (--nthreads 4)
Thu Dec 19 13:43:54 UTC 2019: Arguments: --nthreads 4
Thu Dec 19 13:43:54 UTC 2019: Threads: 4
Thu Dec 19 13:43:54 UTC 2019: Checking for CVMFS
Thu Dec 19 13:44:02 UTC 2019: Probing /cvmfs/atlas.cern.ch... OK
Thu Dec 19 13:44:08 UTC 2019: Probing /cvmfs/atlas-condb.cern.ch... OK
Thu Dec 19 13:44:15 UTC 2019: Probing /cvmfs/grid.cern.ch... OK
Thu Dec 19 13:44:17 UTC 2019: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
Thu Dec 19 13:44:17 UTC 2019: 2.5.1.0 1188028 23 58181 0 77 7976540 10240000 1 65024 0 21136 99.7587 57051 42260 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.117.12:3128 1
Thu Dec 19 13:44:17 UTC 2019: CVMFS is ok
Thu Dec 19 13:44:17 UTC 2019: Singularity not required
Thu Dec 19 13:44:18 UTC 2019: Set ATHENA_PROC_NUMBER=4
Thu Dec 19 13:44:18 UTC 2019: Starting ATLAS job with PandaID=4002876565
Thu Dec 19 13:44:18 UTC 2019: Running command: sh start_atlas.sh
Thu Dec 19 13:57:22 UTC 2019: *** The last 200 lines of the pilot log: ***
Thu Dec 19 13:57:22 UTC 2019: "postExe": {
Thu Dec 19 13:57:22 UTC 2019: "cpuTime": 1,
Thu Dec 19 13:57:22 UTC 2019: "wallTime": 1
Thu Dec 19 13:57:22 UTC 2019: },
Thu Dec 19 13:57:22 UTC 2019: "preExe": {
Thu Dec 19 13:57:22 UTC 2019: "cpuTime": 0,
Thu Dec 19 13:57:22 UTC 2019: "wallTime": 1
Thu Dec 19 13:57:22 UTC 2019: },
Thu Dec 19 13:57:22 UTC 2019: "total": {
Thu Dec 19 13:57:22 UTC 2019: "cpuTime": 34,
Thu Dec 19 13:57:22 UTC 2019: "wallTime": 64
Thu Dec 19 13:57:22 UTC 2019: },
Thu Dec 19 13:57:22 UTC 2019: "validation": {
Thu Dec 19 13:57:22 UTC 2019: "cpuTime": 0,
Thu Dec 19 13:57:22 UTC 2019: "wallTime": 0
Thu Dec 19 13:57:22 UTC 2019: },
Thu Dec 19 13:57:22 UTC 2019: "wallTime": 62
Thu Dec 19 13:57:22 UTC 2019: }
Thu Dec 19 13:57:22 UTC 2019: },
Thu Dec 19 13:57:22 UTC 2019: "machine": {
Thu Dec 19 13:57:22 UTC 2019: "cpu_family": "6",
Thu Dec 19 13:57:22 UTC 2019: "linux_distribution": [
Thu Dec 19 13:57:22 UTC 2019: "CentOS Linux",
Thu Dec 19 13:57:22 UTC 2019: "7.7.1908",
Thu Dec 19 13:57:22 UTC 2019: "Core"
Thu Dec 19 13:57:22 UTC 2019: ],
Thu Dec 19 13:57:22 UTC 2019: "model": "60",
Thu Dec 19 13:57:22 UTC 2019: "model_name": "Intel(R) Core(TM) i7-4790 CPU @ 3.60GHz",
Thu Dec 19 13:57:22 UTC 2019: "node": "17a88056c4fb",
Thu Dec 19 13:57:22 UTC 2019: "platform": "Linux-3.10.0-1062.4.3.el7.x86_64-x86_64-with-centos-7.7.1908-Core"
Thu Dec 19 13:57:22 UTC 2019: },
Thu Dec 19 13:57:22 UTC 2019: "transform": {
Thu Dec 19 13:57:22 UTC 2019: "cpuEfficiency": 0.5675,
Thu Dec 19 13:57:22 UTC 2019: "cpuPWEfficiency": 0.6078,
Thu Dec 19 13:57:22 UTC 2019: "cpuTime": 3,
Thu Dec 19 13:57:22 UTC 2019: "cpuTimeTotal": 1541,
Thu Dec 19 13:57:22 UTC 2019: "externalCpuTime": 5,
Thu Dec 19 13:57:22 UTC 2019: "processedEvents": 10,
Thu Dec 19 13:57:22 UTC 2019: "trfPredata": null,
Thu Dec 19 13:57:22 UTC 2019: "wallTime": 663
Thu Dec 19 13:57:22 UTC 2019: }
Thu Dec 19 13:57:22 UTC 2019: }
Thu Dec 19 13:57:22 UTC 2019: }
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,405 | DEBUG | queue_monitor | pilot.util.auxiliary.4002876565 | update_server | xml:will send fileinfo
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,405 | DEBUG | queue_monitor | pilot.control.job | get_proper_state | state=finished
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,405 | DEBUG | queue_monitor | pilot.control.job | get_proper_state | serverstate=running
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,405 | DEBUG | queue_monitor | pilot.control.job | get_proper_state | serverstate=finished
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,406 | INFO | queue_monitor | pilot.control.job.4002876565 | send_state | pilot will not update the server (heartbeat message will be written to file)
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,406 | INFO | queue_monitor | pilot.control.job.4002876565 | send_state | job 4002876565 has finished - writing final server update
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,406 | DEBUG | queue_monitor | pilot.control.job.4002876565 | get_data_structure | building data structure to be sent to server with heartbeat
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,406 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | get_job_metrics | will not add max space = -350968966 B to job metrics
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,406 | DEBUG | queue_monitor | pilot.api.analytics | get_fitted_data | removing tails from data to be fitted
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,406 | WARNING | queue_monitor | pilot.api.analytics | get_fitted_data | wrong length of table data, x=[1576763388.0, 1576763449.0, 1576763510.0, 1576763571.0, 1576763632.0], y=[2632260.0, 2679691.0, 2696811.0, 2140620.0, 2144684.0] (must be same and length>=4)
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,406 | DEBUG | queue_monitor | pilot.util.auxiliary.4002876565 | get_job_metrics | job metrics="coreCount=4 actualCoreCount=1 nEvents=10"
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,406 | INFO | queue_monitor | pilot.control.job.4002876565 | get_data_structure | total number of processed events: 10 (read)
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,407 | INFO | queue_monitor | pilot.user.atlas.utilities | get_memory_values | using path: /var/lib/boinc/slots/0/PanDA_Pilot-4002876565/memory_monitor_summary.json (trf name=prmon)
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,408 | DEBUG | queue_monitor | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'Max': {'rx_packets': 4159, 'nprocs': 9, 'nthreads': 1, 'rx_bytes': 11387509, 'wtime': 676, 'rss': 9464156, 'write_bytes': 0, 'vmem': 14014300, 'read_bytes': 0, 'stime': 17, 'tx_bytes': 1490527, 'pss': 2696811, 'wchar': 0, 'rchar': 0, 'tx_packets': 4432, 'swap': 0, 'utime': 1511}, 'Avg': {'write_bytes': 0, 'nprocs': 6, 'nthreads': 0, 'rx_bytes': 16845, 'rx_packets': 6, 'vmem': 7497411, 'read_bytes': 0, 'swap': 0, 'tx_bytes': 2204, 'pss': 1708887, 'wchar': 0, 'rchar': 0, 'tx_packets': 6, 'rss': 4824948}}
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,408 | INFO | queue_monitor | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard info from prmon json
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,408 | INFO | queue_monitor | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard memory fields from prmon json
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,408 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | ..............................
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,408 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . Timing measurements:
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,408 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . get job = 0 s
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,408 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . initial setup = 0 s
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,408 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . payload setup = 0 s
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,408 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . total setup = 0 s
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,408 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . stage-in = 0 s
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,408 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . payload execution = 730 s
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,408 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . stage-out = 1 s
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,408 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | ..............................
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,409 | DEBUG | queue_monitor | pilot.control.job.4002876565 | send_state | wrote heartbeat to file /var/lib/boinc/slots/0/heartbeat.json
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,409 | DEBUG | queue_monitor | pilot.control.job | queue_monitor | job 4002876565 was dequeued from the monitored payloads queue
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,409 | DEBUG | queue_monitor | pilot.control.job | queue_monitor | tmp job object deleted
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,745 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report |
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,745 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | job summary report
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,745 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | --------------------------------------------------
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,745 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | PanDA job id: 4002876565
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,745 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | task id: 000649-1444548-14955
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,745 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | errors: (none)
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,745 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | status: LOG_TRANSFER = DONE
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,746 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | pilot state: finished
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,746 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | transexitcode: 0
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,746 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | exeerrorcode: 0
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,746 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | exeerrordiag:
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,746 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | exitcode: 0
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,746 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | exitmsg: OK
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,746 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | cpuconsumptiontime: 1522 s
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,746 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | nevents: 10
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,746 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | neventsw: 0
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,746 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | pid: 6314
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,746 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | pgrp: 6314
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,746 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | corecount: 4
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,746 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | event service: False
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,746 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | --------------------------------------------------
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,746 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report |
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,746 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue jobs has 0 job(s)
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,746 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue payloads has 0 job(s)
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,747 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue data_in has 0 job(s)
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,747 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue data_out has 0 job(s)
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,747 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue current_data_in has 0 job(s)
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,747 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue validated_jobs has 0 job(s)
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,747 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue validated_payloads has 0 job(s)
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,747 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue monitored_payloads has 0 job(s)
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,747 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue finished_jobs has 0 job(s)
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,747 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue finished_payloads has 0 job(s)
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,747 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue finished_data_in has 1 job(s)
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,747 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue finished_data_out has 0 job(s)
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,747 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue failed_jobs has 0 job(s)
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,747 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue failed_payloads has 0 job(s)
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,747 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue failed_data_in has 0 job(s)
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,747 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue failed_data_out has 0 job(s)
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,747 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue completed_jobs has 0 job(s)
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,747 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s)
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,747 | INFO | retrieve | pilot.control.job.4002876565 | has_job_completed | job 4002876565 has completed (purged errors)
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,747 | INFO | retrieve | pilot.util.processes | cleanup | overall cleanup function is called
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:54,752 | DEBUG | retrieve | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc/slots/0/PanDA_Pilot-4002876565
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:55,757 | INFO | retrieve | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [6314]
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:55,757 | INFO | retrieve | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 6314
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:55,757 | INFO | retrieve | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:56,761 | INFO | retrieve | pilot.util.processes | cleanup | collected zombie processes
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:56,761 | INFO | retrieve | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=6314
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:56,777 | INFO | retrieve | pilot.util.processes | kill_processes | process IDs to be killed: [6314] (in reverse order)
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:56,791 | WARNING | retrieve | pilot.util.processes | kill_processes | found no corresponding commands to process id(s)
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:56,791 | INFO | retrieve | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:56,791 | INFO | retrieve | pilot.control.job | retrieve | ready for new job
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:56,791 | INFO | retrieve | root | retrieve | pilot has finished for previous job - re-establishing logging
Thu Dec 19 13:57:22 UTC 2019: mpi4py not found
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:56,793 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner | ****************************************
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:56,793 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 2.3.4 (12) ***
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:56,793 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner | ****************************************
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:56,793 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner |
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:56,794 | INFO | retrieve | pilot.util.auxiliary | display_architecture_info | architecture information:
Thu Dec 19 13:57:22 UTC 2019: 2019-12-19 13:56:56,828 | INFO | retrieve | pilot.util.auxiliary | display_architecture_info |
Thu Dec 19 13:57:22 UTC 2019: LSB Version: :core-4.1-amd64:core-4.1-noarch
Thu Dec 19 13:57:22 UTC 2019: Distributor ID: CentOS
Thu Dec 19 13:57:22 UTC 2019: Description: CentOS Linux release 7.7.1908 (Core)
Thu Dec 19 13:57:23 UTC 2019: Release: 7.7.1908
Thu Dec 19 13:57:23 UTC 2019: Codename: Core
Thu Dec 19 13:57:23 UTC 2019: 2019-12-19 13:56:56,828 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner | ****************************************
Thu Dec 19 13:57:23 UTC 2019: 2019-12-19 13:56:57,331 | DEBUG | retrieve | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc/slots/0
Thu Dec 19 13:57:23 UTC 2019: 2019-12-19 13:56:57,340 | INFO | retrieve | pilot.util.monitoring | check_local_space | sufficient remaining disk space (18940428288 B)
Thu Dec 19 13:57:23 UTC 2019: 2019-12-19 13:56:57,340 | WARNING | retrieve | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job
Thu Dec 19 13:57:23 UTC 2019: 2019-12-19 13:56:57,341 | DEBUG | retrieve | pilot.control.job | retrieve | [job] retrieve thread has finished
Thu Dec 19 13:57:23 UTC 2019: 2019-12-19 13:56:57,343 | WARNING | copytool_out | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration
Thu Dec 19 13:57:23 UTC 2019: 2019-12-19 13:56:57,372 | WARNING | monitor | pilot.control.monitor | control | aborting monitor loop since graceful_stop has been set
Thu Dec 19 13:57:23 UTC 2019: 2019-12-19 13:56:57,372 | INFO | monitor | pilot.control.monitor | control | [monitor] control thread has ended
Thu Dec 19 13:57:23 UTC 2019: 2019-12-19 13:56:57,476 | INFO | validate_post | pilot.control.payload | validate_post | [payload] validate_post thread has finished
Thu Dec 19 13:57:23 UTC 2019: 2019-12-19 13:56:57,530 | DEBUG | payload | pilot.control.payload | control | payload control ending since graceful_stop has been set
Thu Dec 19 13:57:23 UTC 2019: 2019-12-19 13:56:57,530 | DEBUG | payload | pilot.control.payload | control | [payload] control thread has finished
Thu Dec 19 13:57:23 UTC 2019: 2019-12-19 13:56:57,629 | DEBUG | job | pilot.control.job | control | job control ending since graceful_stop has been set
Thu Dec 19 13:57:23 UTC 2019: 2019-12-19 13:56:57,629 | DEBUG | job | pilot.control.job | control | [job] control thread has finished
Thu Dec 19 13:57:23 UTC 2019: 2019-12-19 13:56:57,629 | DEBUG | MainThread | pilot.workflow.generic | run | thread count now at 12 threads
Thu Dec 19 13:57:23 UTC 2019: 2019-12-19 13:56:57,629 | DEBUG | MainThread | pilot.workflow.generic | run | enumerate: [<_MainThread(MainThread, started 140634863281984)>, <ExcThread(copytool_in, started 140634048415488)>, <ExcThread(validate, started 140634691880704)>, <ExcThread(queue_monitor, started 140634040022784)>, <ExcThread(copytool_out, started 140634459461376)>, <ExcThread(failed_post, started 140634031630080)>, <ExcThread(execute_payloads, started 140634023237376)>, <ExcThread(data, started 140634476246784)>, <ExcThread(job_monitor, started 140634065200896)>, <ExcThread(validate_pre, started 140634073593600)>, <ExcThread(queue_monitoring, started 140634425890560)>, <ExcThread(create_data_payload, started 140634451068672)>]
Thu Dec 19 13:57:23 UTC 2019: 2019-12-19 13:56:57,747 | DEBUG | create_data_payload | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished
Thu Dec 19 13:57:23 UTC 2019: 2019-12-19 13:56:57,752 | DEBUG | validate | pilot.control.job | validate | [job] validate thread has finished
Thu Dec 19 13:57:23 UTC 2019: 2019-12-19 13:56:57,821 | INFO | validate_pre | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished
Thu Dec 19 13:57:23 UTC 2019: 2019-12-19 13:56:57,852 | INFO | failed_post | pilot.control.payload | failed_post | [payload] failed_post thread has finished
Thu Dec 19 13:57:23 UTC 2019: 2019-12-19 13:56:58,210 | DEBUG | copytool_in | pilot.control.data | copytool_in | [data] copytool_in thread has finished
Thu Dec 19 13:57:23 UTC 2019: 2019-12-19 13:56:58,309 | DEBUG | data | pilot.control.data | control | data control ending since graceful_stop has been set
Thu Dec 19 13:57:23 UTC 2019: 2019-12-19 13:56:58,310 | DEBUG | data | pilot.control.data | control | [data] control thread has finished
Thu Dec 19 13:57:23 UTC 2019: 2019-12-19 13:56:58,344 | DEBUG | copytool_out | pilot.control.data | copytool_out | [data] copytool_out thread has finished
Thu Dec 19 13:57:23 UTC 2019: 2019-12-19 13:56:58,381 | INFO | execute_payloads | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished
Thu Dec 19 13:57:23 UTC 2019: 2019-12-19 13:56:58,635 | DEBUG | MainThread | pilot.workflow.generic | run | thread count now at 4 threads
Thu Dec 19 13:57:23 UTC 2019: 2019-12-19 13:56:58,635 | DEBUG | MainThread | pilot.workflow.generic | run | enumerate: [<_MainThread(MainThread, started 140634863281984)>, <ExcThread(queue_monitor, started 140634040022784)>, <ExcThread(job_monitor, started 140634065200896)>, <ExcThread(queue_monitoring, started 140634425890560)>]
Thu Dec 19 13:57:23 UTC 2019: 2019-12-19 13:56:58,703 | WARNING | queue_monitoring | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration
Thu Dec 19 13:57:23 UTC 2019: 2019-12-19 13:56:59,416 | WARNING | queue_monitor | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration
Thu Dec 19 13:57:23 UTC 2019: 2019-12-19 13:56:59,416 | DEBUG | queue_monitor | pilot.control.job | queue_monitor | [job] queue monitor thread has finished
Thu Dec 19 13:57:23 UTC 2019: 2019-12-19 13:56:59,640 | DEBUG | MainThread | pilot.workflow.generic | run | thread count now at 3 threads
Thu Dec 19 13:57:23 UTC 2019: 2019-12-19 13:56:59,640 | DEBUG | MainThread | pilot.workflow.generic | run | enumerate: [<_MainThread(MainThread, started 140634863281984)>, <ExcThread(job_monitor, started 140634065200896)>, <ExcThread(queue_monitoring, started 140634425890560)>]
Thu Dec 19 13:57:23 UTC 2019: 2019-12-19 13:57:01,704 | DEBUG | queue_monitoring | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished
Thu Dec 19 13:57:23 UTC 2019: 2019-12-19 13:57:02,652 | DEBUG | MainThread | pilot.workflow.generic | run | thread count now at 2 threads
Thu Dec 19 13:57:23 UTC 2019: 2019-12-19 13:57:02,652 | DEBUG | MainThread | pilot.workflow.generic | run | enumerate: [<_MainThread(MainThread, started 140634863281984)>, <ExcThread(job_monitor, started 140634065200896)>]
Thu Dec 19 13:57:23 UTC 2019: 2019-12-19 13:57:22,447 | WARNING | job_monitor | pilot.control.job | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 72 s)
Thu Dec 19 13:57:23 UTC 2019: 2019-12-19 13:57:22,447 | DEBUG | job_monitor | pilot.control.job | job_monitor | [job] job monitor thread has finished
Thu Dec 19 13:57:23 UTC 2019: 2019-12-19 13:57:22,750 | INFO | MainThread | pilot.workflow.generic | run | end of generic workflow (traces error code: 0)
Thu Dec 19 13:57:23 UTC 2019: 2019-12-19 13:57:22,750 | INFO | MainThread | root | wrap_up | traces error code: 0
Thu Dec 19 13:57:23 UTC 2019: 2019-12-19 13:57:22,750 | INFO | MainThread | root | wrap_up | pilot has finished
Thu Dec 19 13:57:23 UTC 2019: 2019-12-19 13:57:22 UTC [wrapper] ==== pilot stdout END ====
Thu Dec 19 13:57:23 UTC 2019: 2019-12-19 13:57:22 UTC [wrapper] ==== wrapper stdout RESUME ====
Thu Dec 19 13:57:23 UTC 2019: 2019-12-19 13:57:22 UTC [wrapper] Pilot exit status: 0
Thu Dec 19 13:57:23 UTC 2019: 2019-12-19 13:57:22 UTC [wrapper] STATUSCODE: 0
Thu Dec 19 13:57:23 UTC 2019: 2019-12-19 13:57:22 UTC [wrapper] apfmon messages muted
Thu Dec 19 13:57:23 UTC 2019: ---- find pandaID.out ----
Thu Dec 19 13:57:23 UTC 2019: total 60
Thu Dec 19 13:57:23 UTC 2019: -rw-rw-r--. 1 320 320 11357 Jul 25 14:38 LICENSE
Thu Dec 19 13:57:23 UTC 2019: -rw-r--r--. 1 320 320 20 Sep 9 11:04 MANIFEST.IN
Thu Dec 19 13:57:23 UTC 2019: -rw-r--r--. 1 320 320 8 Dec 12 18:00 PILOTVERSION
Thu Dec 19 13:57:23 UTC 2019: -rw-r--r--. 1 320 320 2212 Nov 14 10:01 README.md
Thu Dec 19 13:57:23 UTC 2019: -rw-rw-r--. 1 320 320 221 Jul 25 14:38 TODO.md
Thu Dec 19 13:57:23 UTC 2019: -rw-------. 1 root root 11 Dec 19 13:44 pandaIDs.out
Thu Dec 19 13:57:23 UTC 2019: drwxrwxr-x. 14 320 320 216 Dec 19 13:44 pilot
Thu Dec 19 13:57:23 UTC 2019: -rwxr-xr-x. 1 320 320 21225 Dec 12 18:00 pilot.py
Thu Dec 19 13:57:23 UTC 2019: -rw-r--r--. 1 320 320 766 Oct 10 14:01 setup.py
Thu Dec 19 13:57:23 UTC 2019: -rw-------. 1 root root 11 Dec 19 13:44 /var/lib/boinc/slots/0/pilot2/pandaIDs.out
Thu Dec 19 13:57:23 UTC 2019: 4002876565
Thu Dec 19 13:57:23 UTC 2019:
Thu Dec 19 13:57:23 UTC 2019: 2019-12-19 13:57:22 UTC [wrapper] Test setup, not cleaning
Thu Dec 19 13:57:23 UTC 2019: 2019-12-19 13:57:22 UTC [wrapper] ==== wrapper stdout END ====
Thu Dec 19 13:57:23 UTC 2019: 2019-12-19 13:57:22 UTC [wrapper] ==== wrapper stderr END ====
Thu Dec 19 13:57:23 UTC 2019: 2019-12-19 13:57:22 UTC [wrapper] wrapper wrapperexiting ec=0, duration=784
Thu Dec 19 13:57:23 UTC 2019: 2019-12-19 13:57:22 UTC [wrapper] apfmon messages muted
Thu Dec 19 13:57:23 UTC 2019: *** Error codes and diagnostics ***
Thu Dec 19 13:57:23 UTC 2019: "exeErrorCode": 0,
Thu Dec 19 13:57:23 UTC 2019: "exeErrorDiag": "",
Thu Dec 19 13:57:23 UTC 2019: "pilotErrorCode": 0,
Thu Dec 19 13:57:23 UTC 2019: "pilotErrorDiag": "",
Thu Dec 19 13:57:23 UTC 2019: *** Listing of results directory ***
Thu Dec 19 13:57:23 UTC 2019: total 379328
Thu Dec 19 13:57:23 UTC 2019: -rw-r--r--. 1 root root 267260 Dec 17 15:30 pilot2.tar.gz
Thu Dec 19 13:57:23 UTC 2019: -rw-r--r--. 1 root root 4492 Dec 17 16:00 queuedata.json
Thu Dec 19 13:57:23 UTC 2019: -rwx------. 1 4871 1028 12641 Dec 17 16:02 runpilot2-wrapper.sh
Thu Dec 19 13:57:23 UTC 2019: -rw-r--r--. 1 root root 107 Dec 19 13:43 wrapper_26015_x86_64-pc-linux-gnu
Thu Dec 19 13:57:23 UTC 2019: -rwxr-xr-x. 1 root root 5427 Dec 19 13:43 run_atlas
Thu Dec 19 13:57:23 UTC 2019: -rw-r--r--. 1 root root 112 Dec 19 13:43 job.xml
Thu Dec 19 13:57:23 UTC 2019: drwxrwx--x. 2 root root 86 Dec 19 13:43 shared
Thu Dec 19 13:57:23 UTC 2019: -rw-r--r--. 1 root root 5977 Dec 19 13:43 init_data.xml
Thu Dec 19 13:57:23 UTC 2019: -rw-r--r--. 1 root root 0 Dec 19 13:43 boinc_lockfile
Thu Dec 19 13:57:23 UTC 2019: -rw-r--r--. 1 root root 275422 Dec 19 13:44 input.tar.gz
Thu Dec 19 13:57:23 UTC 2019: -rw-r--r--. 1 root root 815 Dec 19 13:44 RTE.tar.gz
Thu Dec 19 13:57:23 UTC 2019: -rw-r--r--. 1 root root 365251149 Dec 19 13:44 EVNT.14296418._001447.pool.root.1
Thu Dec 19 13:57:23 UTC 2019: -rw-r--r--. 1 root root 8513 Dec 19 13:44 start_atlas.sh
Thu Dec 19 13:57:23 UTC 2019: -rw-r--r--. 1 root root 2958 Dec 19 13:44 pandaJob.out
Thu Dec 19 13:57:23 UTC 2019: drwxr-xr-x. 3 root root 17 Dec 19 13:44 APPS
Thu Dec 19 13:57:23 UTC 2019: -rw-------. 1 root root 3761779 Dec 19 13:44 agis_schedconf.cvmfs.json
Thu Dec 19 13:57:23 UTC 2019: -rw-------. 1 root root 7775375 Dec 19 13:44 agis_ddmendpoints.json
Thu Dec 19 13:57:23 UTC 2019: drwxr-xr-x. 3 320 320 229 Dec 19 13:44 pilot2
Thu Dec 19 13:57:23 UTC 2019: -rw-r--r--. 1 root root 534 Dec 19 13:52 boinc_task_state.xml
Thu Dec 19 13:57:23 UTC 2019: -rw-------. 1 root root 9159225 Dec 19 13:55 HITS.000649-1444548-14955._078090.pool.root.1
Thu Dec 19 13:57:23 UTC 2019: -rw-------. 1 root root 780 Dec 19 13:56 memory_monitor_summary.json
Thu Dec 19 13:57:23 UTC 2019: -rw-------. 1 root root 715148 Dec 19 13:56 log.000649-1444548-14955._078090.job.log.tgz.1
Thu Dec 19 13:57:23 UTC 2019: -rw-------. 1 root root 15070 Dec 19 13:56 heartbeat.json
Thu Dec 19 13:57:23 UTC 2019: -rw-r--r--. 1 root root 8192 Dec 19 13:56 boinc_mmap_file
Thu Dec 19 13:57:23 UTC 2019: -rw-r--r--. 1 root root 25 Dec 19 13:56 wrapper_checkpoint.txt
Thu Dec 19 13:57:23 UTC 2019: -rw-------. 1 root root 8471 Dec 19 13:57 pilotlog.txt
Thu Dec 19 13:57:23 UTC 2019: -rw-------. 1 root root 160121 Dec 19 13:57 log.000649-1444548-14955._078090.job.log.1
Thu Dec 19 13:57:23 UTC 2019: -rw-------. 1 root root 501 Dec 19 13:57 2SDMDm6TU1vnShfckohDCDFpABFKDmABFKDmyiALDmZDFKDm7K5BJo.diag
Thu Dec 19 13:57:23 UTC 2019: -rw-r--r--. 1 root root 7164 Dec 19 13:57 runtime_log.err
Thu Dec 19 13:57:23 UTC 2019: -rw-------. 1 root root 499 Dec 19 13:57 output.list
Thu Dec 19 13:57:23 UTC 2019: -rw-r--r--. 1 root root 742 Dec 19 13:57 runtime_log
Thu Dec 19 13:57:23 UTC 2019: -rw-------. 1 root root 901120 Dec 19 13:57 result.tar.gz
Thu Dec 19 13:57:23 UTC 2019: -rw-r--r--. 1 root root 1307 Dec 19 13:57 stderr.txt
Thu Dec 19 13:57:23 UTC 2019: HITS file was successfully produced:
Thu Dec 19 13:57:23 UTC 2019: -rw-------. 1 root root 9159225 Dec 19 13:55 shared/HITS.pool.root.1
Thu Dec 19 13:57:23 UTC 2019: *** Contents of shared directory: ***
Thu Dec 19 13:57:23 UTC 2019: total 366808
Thu Dec 19 13:57:23 UTC 2019: -rw-r--r--. 1 root root 365251149 Dec 19 13:43 ATLAS.root_0
Thu Dec 19 13:57:23 UTC 2019: -rw-r--r--. 1 root root 8513 Dec 19 13:43 start_atlas.sh
Thu Dec 19 13:57:23 UTC 2019: -rw-r--r--. 1 root root 275422 Dec 19 13:43 input.tar.gz
Thu Dec 19 13:57:23 UTC 2019: -rw-r--r--. 1 root root 815 Dec 19 13:43 RTE.tar.gz
Thu Dec 19 13:57:23 UTC 2019: -rw-------. 1 root root 9159225 Dec 19 13:55 HITS.pool.root.1
Thu Dec 19 13:57:23 UTC 2019: -rw-------. 1 root root 901120 Dec 19 13:57 result.tar.gz
13:57:23 (233): run_atlas exited; CPU time 1522.878814
13:57:23 (233): called boinc_finish(0)
</stderr_txt>
]]>
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