| Name | nfBODm5W48vnShfckohDCDFpABFKDmABFKDmzgDXDmABFKDmOr4Jgm_0 |
| Workunit | 1969415 |
| Created | 7 Jan 2020, 13:57:10 UTC |
| Sent | 8 Jan 2020, 10:14:14 UTC |
| Report deadline | 15 Jan 2020, 10:14:14 UTC |
| Received | 8 Jan 2020, 11:01:31 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 3717 |
| Run time | 45 min 29 sec |
| CPU time | 1 hours 40 min 52 sec |
| Validate state | Valid |
| Credit | 111.34 |
| Device peak FLOPS | 17.62 GFLOPS |
| Application version | ATLAS Simulation v0.99 (native_mt) x86_64-pc-linux-gnu |
| Peak working set size | 1.86 GB |
| Peak swap size | 2.55 GB |
| Peak disk usage | 722.94 MB |
Stderr output
<core_client_version>7.12.0</core_client_version>
<![CDATA[
<stderr_txt>
11:15:41 (27498): wrapper (7.7.26015): starting
11:15:41 (27498): wrapper: running run_atlas (--nthreads 4)
wo 8 jan 2020 11:15:41 CET: Arguments: --nthreads 4
wo 8 jan 2020 11:15:41 CET: Threads: 4
wo 8 jan 2020 11:15:41 CET: Checking for CVMFS
wo 8 jan 2020 11:15:47 CET: Probing /cvmfs/atlas.cern.ch... OK
wo 8 jan 2020 11:15:48 CET: Probing /cvmfs/atlas-condb.cern.ch... OK
wo 8 jan 2020 11:15:50 CET: Probing /cvmfs/grid.cern.ch... OK
wo 8 jan 2020 11:15:51 CET: Probing /cvmfs/cernvm-prod.cern.ch... OK
wo 8 jan 2020 11:15:52 CET: Probing /cvmfs/sft.cern.ch... OK
wo 8 jan 2020 11:15:53 CET: Probing /cvmfs/alice.cern.ch... OK
wo 8 jan 2020 11:15:54 CET: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
wo 8 jan 2020 11:15:54 CET: 2.5.2.0 27635 0 24596 58890 3 1 2686797 4194304 0 65024 0 0 n/a 20334 3821 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
wo 8 jan 2020 11:15:54 CET: CVMFS is ok
wo 8 jan 2020 11:15:54 CET: System is not Red Hat/CentOS 7, singularity is required
wo 8 jan 2020 11:15:54 CET: Using singularity image /cvmfs/atlas.cern.ch/repo/containers/images/singularity/x86_64-centos7.img
wo 8 jan 2020 11:15:54 CET: Checking for singularity binary...
wo 8 jan 2020 11:15:54 CET: Singularity is not installed, using version from CVMFS
wo 8 jan 2020 11:15:54 CET: Checking singularity works with /cvmfs/atlas.cern.ch/repo/containers/sw/singularity/x86_64-el7/current/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/images/singularity/x86_64-centos7.img hostname
wo 8 jan 2020 11:16:42 CET: [34mINFO: [0m Convert SIF file to sandbox... LinAH125 [34mINFO: [0m Cleaning up image...
wo 8 jan 2020 11:16:42 CET: Singularity works
wo 8 jan 2020 11:16:50 CET: Set ATHENA_PROC_NUMBER=4
wo 8 jan 2020 11:16:50 CET: Starting ATLAS job with PandaID=4002876565
wo 8 jan 2020 11:16:50 CET: Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/singularity/x86_64-el7/current/bin/singularity exec --pwd /var/lib/boinc-client/slots/0 -B /cvmfs,/var /cvmfs/atlas.cern.ch/repo/containers/images/singularity/x86_64-centos7.img sh start_atlas.sh
wo 8 jan 2020 12:01:08 CET: *** The last 200 lines of the pilot log: ***
wo 8 jan 2020 12:01:08 CET: "wallTime": 1
wo 8 jan 2020 12:01:08 CET: },
wo 8 jan 2020 12:01:08 CET: "preExe": {
wo 8 jan 2020 12:01:08 CET: "cpuTime": 1,
wo 8 jan 2020 12:01:08 CET: "wallTime": 11
wo 8 jan 2020 12:01:08 CET: },
wo 8 jan 2020 12:01:08 CET: "total": {
wo 8 jan 2020 12:01:08 CET: "cpuTime": 105,
wo 8 jan 2020 12:01:08 CET: "wallTime": 213
wo 8 jan 2020 12:01:08 CET: },
wo 8 jan 2020 12:01:08 CET: "validation": {
wo 8 jan 2020 12:01:08 CET: "cpuTime": 0,
wo 8 jan 2020 12:01:08 CET: "wallTime": 0
wo 8 jan 2020 12:01:08 CET: },
wo 8 jan 2020 12:01:08 CET: "wallTime": 202
wo 8 jan 2020 12:01:08 CET: }
wo 8 jan 2020 12:01:08 CET: },
wo 8 jan 2020 12:01:08 CET: "machine": {
wo 8 jan 2020 12:01:08 CET: "cpu_family": "6",
wo 8 jan 2020 12:01:08 CET: "linux_distribution": [
wo 8 jan 2020 12:01:08 CET: "CentOS Linux",
wo 8 jan 2020 12:01:08 CET: "7.6.1810",
wo 8 jan 2020 12:01:08 CET: "Core"
wo 8 jan 2020 12:01:08 CET: ],
wo 8 jan 2020 12:01:08 CET: "model": "42",
wo 8 jan 2020 12:01:08 CET: "model_name": "Intel(R) Core(TM) i7-2600 CPU @ 3.40GHz",
wo 8 jan 2020 12:01:08 CET: "node": "LinAH125",
wo 8 jan 2020 12:01:08 CET: "platform": "Linux-4.18.0-15-generic-x86_64-with-centos-7.6.1810-Core"
wo 8 jan 2020 12:01:08 CET: },
wo 8 jan 2020 12:01:08 CET: "transform": {
wo 8 jan 2020 12:01:08 CET: "cpuEfficiency": 0.6325,
wo 8 jan 2020 12:01:08 CET: "cpuPWEfficiency": 0.6681,
wo 8 jan 2020 12:01:08 CET: "cpuTime": 10,
wo 8 jan 2020 12:01:08 CET: "cpuTimeTotal": 6152,
wo 8 jan 2020 12:01:08 CET: "externalCpuTime": 29,
wo 8 jan 2020 12:01:08 CET: "processedEvents": 10,
wo 8 jan 2020 12:01:08 CET: "trfPredata": null,
wo 8 jan 2020 12:01:08 CET: "wallTime": 2383
wo 8 jan 2020 12:01:08 CET: }
wo 8 jan 2020 12:01:08 CET: }
wo 8 jan 2020 12:01:08 CET: }
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:18,611 | DEBUG | queue_monitor | pilot.util.auxiliary.4002876565 | update_server | xml:will send fileinfo
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:18,611 | DEBUG | queue_monitor | pilot.control.job | get_proper_state | state=finished
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:18,612 | DEBUG | queue_monitor | pilot.control.job | get_proper_state | serverstate=running
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:18,612 | DEBUG | queue_monitor | pilot.control.job | get_proper_state | serverstate=finished
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:18,612 | INFO | queue_monitor | pilot.control.job.4002876565 | send_state | pilot will not update the server (heartbeat message will be written to file)
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:18,612 | INFO | queue_monitor | pilot.control.job.4002876565 | send_state | job 4002876565 has finished - writing final server update
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:18,613 | DEBUG | queue_monitor | pilot.control.job.4002876565 | get_data_structure | building data structure to be sent to server with heartbeat
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:18,613 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | get_job_metrics | will not add max space = -351849037 B to job metrics
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:18,615 | DEBUG | queue_monitor | pilot.api.analytics | get_fitted_data | removing tails from data to be fitted
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:18,616 | INFO | queue_monitor | pilot.api.analytics | get_fitted_data | fitting pss+swap vs Time
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:18,617 | INFO | queue_monitor | pilot.api.analytics | get_fitted_data | current memory leak: -397.97 B/s (using 34 data points, chi2=3344341)
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:18,617 | DEBUG | queue_monitor | pilot.util.auxiliary.4002876565 | get_job_metrics | job metrics="coreCount=4 actualCoreCount=1 nEvents=10 leak=-397.97 chi2=3344341"
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:18,618 | INFO | queue_monitor | pilot.control.job.4002876565 | get_data_structure | total number of processed events: 10 (read)
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:18,619 | INFO | queue_monitor | pilot.user.atlas.utilities | get_memory_values | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-4002876565/memory_monitor_summary.json (trf name=prmon)
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:18,622 | DEBUG | queue_monitor | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'Max': {'rx_packets': 36185, 'nprocs': 12, 'nthreads': 1, 'rx_bytes': 21900242, 'wtime': 2429, 'rss': 9752296, 'write_bytes': 0, 'vmem': 14024400, 'read_bytes': 0, 'stime': 109, 'tx_bytes': 9206334, 'pss': 2576038, 'wchar': 0, 'rchar': 0, 'tx_packets': 26891, 'swap': 0, 'utime': 6022}, 'Avg': {'write_bytes': 0, 'nprocs': 7, 'nthreads': 0, 'rx_bytes': 9014, 'rx_packets': 14, 'vmem': 9357798, 'read_bytes': 0, 'swap': 0, 'tx_bytes': 3789, 'pss': 1998657, 'wchar': 0, 'rchar': 0, 'tx_packets': 11, 'rss': 6288691}}
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:18,622 | INFO | queue_monitor | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard info from prmon json
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:18,623 | INFO | queue_monitor | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard memory fields from prmon json
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:18,623 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | ..............................
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:18,623 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . Timing measurements:
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:18,623 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . get job = 0 s
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:18,624 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . initial setup = 2 s
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:18,624 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . payload setup = 0 s
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:18,624 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . total setup = 2 s
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:18,624 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . stage-in = 0 s
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:18,624 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . payload execution = 2494 s
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:18,624 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . stage-out = 4 s
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:18,624 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | ..............................
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:18,625 | DEBUG | queue_monitor | pilot.control.job.4002876565 | send_state | wrote heartbeat to file /var/lib/boinc-client/slots/0/heartbeat.json
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:18,626 | DEBUG | queue_monitor | pilot.control.job | queue_monitor | job 4002876565 was dequeued from the monitored payloads queue
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:18,626 | DEBUG | queue_monitor | pilot.control.job | queue_monitor | tmp job object deleted
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:19,088 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report |
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:19,088 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | job summary report
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:19,088 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | --------------------------------------------------
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:19,088 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | PanDA job id: 4002876565
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:19,088 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | task id: 000649-39889-8129
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:19,088 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | errors: (none)
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:19,089 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | status: LOG_TRANSFER = DONE
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:19,089 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | pilot state: finished
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:19,089 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | transexitcode: 0
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:19,089 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | exeerrorcode: 0
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:19,089 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | exeerrordiag:
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:19,089 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | exitcode: 0
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:19,090 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | exitmsg: OK
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:19,090 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | cpuconsumptiontime: 6132 s
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:19,090 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | nevents: 10
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:19,090 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | neventsw: 0
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:19,090 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | pid: 2315
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:19,091 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | pgrp: 2315
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:19,091 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | corecount: 4
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:19,091 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | event service: False
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:19,091 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | --------------------------------------------------
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:19,091 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report |
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:19,091 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue jobs has 0 job(s)
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:19,091 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue payloads has 0 job(s)
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:19,092 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue data_in has 0 job(s)
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:19,092 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue data_out has 0 job(s)
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:19,092 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue current_data_in has 0 job(s)
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:19,092 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue validated_jobs has 0 job(s)
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:19,092 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue validated_payloads has 0 job(s)
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:19,092 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue monitored_payloads has 0 job(s)
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:19,092 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue finished_jobs has 0 job(s)
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:19,093 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue finished_payloads has 0 job(s)
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:19,093 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue finished_data_in has 1 job(s)
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:19,093 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue finished_data_out has 0 job(s)
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:19,093 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue failed_jobs has 0 job(s)
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:19,093 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue failed_payloads has 0 job(s)
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:19,093 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue failed_data_in has 0 job(s)
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:19,093 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue failed_data_out has 0 job(s)
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:19,094 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue completed_jobs has 0 job(s)
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:19,094 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s)
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:19,094 | INFO | retrieve | pilot.control.job.4002876565 | has_job_completed | job 4002876565 has completed (purged errors)
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:19,094 | INFO | retrieve | pilot.util.processes | cleanup | overall cleanup function is called
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:19,101 | DEBUG | retrieve | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc-client/slots/0/PanDA_Pilot-4002876565
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:20,107 | INFO | retrieve | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [2315]
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:20,107 | INFO | retrieve | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 2315
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:20,107 | INFO | retrieve | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:21,113 | INFO | retrieve | pilot.util.processes | cleanup | collected zombie processes
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:21,113 | INFO | retrieve | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=2315
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:21,201 | INFO | retrieve | pilot.util.processes | kill_processes | process IDs to be killed: [2315] (in reverse order)
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:21,271 | WARNING | retrieve | pilot.util.processes | kill_processes | found no corresponding commands to process id(s)
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:21,272 | INFO | retrieve | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:21,272 | INFO | retrieve | pilot.control.job | retrieve | ready for new job
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:21,272 | INFO | retrieve | root | retrieve | pilot has finished for previous job - re-establishing logging
wo 8 jan 2020 12:01:08 CET: mpi4py not found
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:21,280 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner | ****************************************
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:21,280 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 2.3.4 (12) ***
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:21,280 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner | ****************************************
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:21,281 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner |
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:21,281 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner | pilot is running in a VM
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:21,281 | INFO | retrieve | pilot.util.auxiliary | display_architecture_info | architecture information:
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:21,425 | INFO | retrieve | pilot.util.auxiliary | display_architecture_info |
wo 8 jan 2020 12:01:08 CET: LSB Version: :core-4.1-amd64:core-4.1-noarch
wo 8 jan 2020 12:01:08 CET: Distributor ID: CentOS
wo 8 jan 2020 12:01:08 CET: Description: CentOS Linux release 7.6.1810 (Core)
wo 8 jan 2020 12:01:08 CET: Release: 7.6.1810
wo 8 jan 2020 12:01:08 CET: Codename: Core
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:21,426 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner | ****************************************
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:21,933 | DEBUG | retrieve | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc-client/slots/0
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:21,957 | INFO | retrieve | pilot.util.monitoring | check_local_space | sufficient remaining disk space (10193207296 B)
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:21,957 | WARNING | retrieve | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:21,957 | DEBUG | retrieve | pilot.control.job | retrieve | [job] retrieve thread has finished
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:22,003 | WARNING | monitor | pilot.control.monitor | control | aborting monitor loop since graceful_stop has been set
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:22,004 | INFO | monitor | pilot.control.monitor | control | [monitor] control thread has ended
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:22,019 | DEBUG | MainThread | pilot.workflow.generic | run | thread count now at 15 threads
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:22,020 | DEBUG | MainThread | pilot.workflow.generic | run | enumerate: [<_MainThread(MainThread, started 140392757720896)>, <ExcThread(job, started 140392595564288)>, <ExcThread(copytool_out, started 140392347465472)>, <ExcThread(validate_post, started 140391735092992)>, <ExcThread(validate_pre, started 140392322287360)>, <ExcThread(queue_monitoring, started 140392305501952)>, <ExcThread(job_monitor, started 140392330680064)>, <ExcThread(queue_monitor, started 140392297109248)>, <ExcThread(execute_payloads, started 140391718307584)>, <ExcThread(copytool_in, started 140391743485696)>, <ExcThread(create_data_payload, started 140392570386176)>, <ExcThread(data, started 140392578778880)>, <ExcThread(failed_post, started 140391726700288)>, <ExcThread(validate, started 140392587171584)>, <ExcThread(payload, started 140392561993472)>]
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:22,125 | INFO | failed_post | pilot.control.payload | failed_post | [payload] failed_post thread has finished
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:22,125 | INFO | validate_post | pilot.control.payload | validate_post | [payload] validate_post thread has finished
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:22,213 | DEBUG | payload | pilot.control.payload | control | payload control ending since graceful_stop has been set
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:22,213 | DEBUG | payload | pilot.control.payload | control | [payload] control thread has finished
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:22,503 | INFO | validate_pre | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:22,522 | DEBUG | data | pilot.control.data | control | data control ending since graceful_stop has been set
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:22,523 | DEBUG | copytool_in | pilot.control.data | copytool_in | [data] copytool_in thread has finished
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:22,523 | DEBUG | data | pilot.control.data | control | [data] control thread has finished
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:22,980 | DEBUG | job | pilot.control.job | control | job control ending since graceful_stop has been set
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:22,980 | DEBUG | job | pilot.control.job | control | [job] control thread has finished
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:23,013 | WARNING | copytool_out | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:23,027 | DEBUG | MainThread | pilot.workflow.generic | run | thread count now at 8 threads
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:23,027 | DEBUG | MainThread | pilot.workflow.generic | run | enumerate: [<_MainThread(MainThread, started 140392757720896)>, <ExcThread(copytool_out, started 140392347465472)>, <ExcThread(queue_monitoring, started 140392305501952)>, <ExcThread(job_monitor, started 140392330680064)>, <ExcThread(queue_monitor, started 140392297109248)>, <ExcThread(execute_payloads, started 140391718307584)>, <ExcThread(create_data_payload, started 140392570386176)>, <ExcThread(validate, started 140392587171584)>]
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:23,094 | DEBUG | validate | pilot.control.job | validate | [job] validate thread has finished
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:23,095 | INFO | execute_payloads | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:23,096 | DEBUG | create_data_payload | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:23,643 | WARNING | queue_monitor | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:23,643 | DEBUG | queue_monitor | pilot.control.job | queue_monitor | [job] queue monitor thread has finished
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:24,014 | DEBUG | copytool_out | pilot.control.data | copytool_out | [data] copytool_out thread has finished
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:24,035 | DEBUG | MainThread | pilot.workflow.generic | run | thread count now at 3 threads
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:24,035 | DEBUG | MainThread | pilot.workflow.generic | run | enumerate: [<_MainThread(MainThread, started 140392757720896)>, <ExcThread(queue_monitoring, started 140392305501952)>, <ExcThread(job_monitor, started 140392330680064)>]
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:24,243 | WARNING | queue_monitoring | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:27,249 | DEBUG | queue_monitoring | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:28,074 | DEBUG | MainThread | pilot.workflow.generic | run | thread count now at 2 threads
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:00:28,074 | DEBUG | MainThread | pilot.workflow.generic | run | enumerate: [<_MainThread(MainThread, started 140392757720896)>, <ExcThread(job_monitor, started 140392330680064)>]
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:01:03,174 | WARNING | job_monitor | pilot.control.job | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 73 s)
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:01:03,174 | DEBUG | job_monitor | pilot.control.job | job_monitor | [job] job monitor thread has finished
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:01:03,797 | INFO | MainThread | pilot.workflow.generic | run | end of generic workflow (traces error code: 0)
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:01:03,798 | INFO | MainThread | root | wrap_up | traces error code: 0
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:01:03,798 | INFO | MainThread | root | wrap_up | pilot has finished
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:01:03 UTC [wrapper] ==== pilot stdout END ====
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:01:03 UTC [wrapper] ==== wrapper stdout RESUME ====
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:01:03 UTC [wrapper] Pilot exit status: 0
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:01:03 UTC [wrapper] STATUSCODE: 0
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:01:03 UTC [wrapper] apfmon messages muted
wo 8 jan 2020 12:01:08 CET: ---- find pandaID.out ----
wo 8 jan 2020 12:01:08 CET: total 64
wo 8 jan 2020 12:01:08 CET: -rw------- 1 boinc boinc 11357 Jul 25 16:38 LICENSE
wo 8 jan 2020 12:01:08 CET: -rw------- 1 boinc boinc 20 Sep 9 13:04 MANIFEST.IN
12:01:08 (27498): run_atlas exited; CPU time 6052.402304
wo 8 jan 2020 12:01:08 CET: -rw------- 1 boinc boinc 8 Dec 12 19:00 PILOTVERSION
12:01:08 (27498): called boinc_finish(0)
wo 8 jan 2020 12:01:08 CET: -rw------- 1 boinc boinc 2212 Nov 14 11:01 README.md
wo 8 jan 2020 12:01:08 CET: -rw------- 1 boinc boinc 221 Jul 25 16:38 TODO.md
wo 8 jan 2020 12:01:08 CET: -rw------- 1 boinc boinc 11 Jan 8 11:18 pandaIDs.out
wo 8 jan 2020 12:01:08 CET: drwx------ 14 boinc boinc 4096 Jan 8 11:18 pilot
wo 8 jan 2020 12:01:08 CET: -rwx------ 1 boinc boinc 21225 Dec 12 19:00 pilot.py
wo 8 jan 2020 12:01:08 CET: -rw------- 1 boinc boinc 766 Oct 10 16:01 setup.py
wo 8 jan 2020 12:01:08 CET: -rw------- 1 boinc boinc 11 Jan 8 11:18 /var/lib/boinc-client/slots/0/pilot2/pandaIDs.out
wo 8 jan 2020 12:01:08 CET: 4002876565
wo 8 jan 2020 12:01:08 CET:
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:01:04 UTC [wrapper] Test setup, not cleaning
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:01:04 UTC [wrapper] ==== wrapper stdout END ====
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:01:04 UTC [wrapper] ==== wrapper stderr END ====
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:01:04 UTC [wrapper] wrapper wrapperexiting ec=0, duration=2582
wo 8 jan 2020 12:01:08 CET: 2020-01-08 11:01:04 UTC [wrapper] apfmon messages muted
wo 8 jan 2020 12:01:08 CET: *** Error codes and diagnostics ***
wo 8 jan 2020 12:01:08 CET: "exeErrorCode": 0,
wo 8 jan 2020 12:01:08 CET: "exeErrorDiag": "",
wo 8 jan 2020 12:01:08 CET: "pilotErrorCode": 0,
wo 8 jan 2020 12:01:08 CET: "pilotErrorDiag": "",
wo 8 jan 2020 12:01:08 CET: *** Listing of results directory ***
wo 8 jan 2020 12:01:08 CET: total 379348
wo 8 jan 2020 12:01:08 CET: -rw-r--r-- 1 boinc boinc 267260 jan 7 14:27 pilot2.tar.gz
wo 8 jan 2020 12:01:08 CET: -rw-r--r-- 1 boinc boinc 4492 jan 7 14:56 queuedata.json
wo 8 jan 2020 12:01:08 CET: -rwx------ 1 boinc boinc 12641 jan 7 14:57 runpilot2-wrapper.sh
wo 8 jan 2020 12:01:08 CET: -rw-r--r-- 1 boinc boinc 107 jan 8 11:15 wrapper_26015_x86_64-pc-linux-gnu
wo 8 jan 2020 12:01:08 CET: -rwxr-xr-x 1 boinc boinc 5551 jan 8 11:15 run_atlas
wo 8 jan 2020 12:01:08 CET: -rw-r--r-- 1 boinc boinc 112 jan 8 11:15 job.xml
wo 8 jan 2020 12:01:08 CET: drwxrwx--x 2 boinc boinc 4096 jan 8 11:15 shared
wo 8 jan 2020 12:01:08 CET: -rw-r--r-- 1 boinc boinc 5873 jan 8 11:15 init_data.xml
wo 8 jan 2020 12:01:08 CET: -rw-r--r-- 1 boinc boinc 0 jan 8 11:15 boinc_lockfile
wo 8 jan 2020 12:01:08 CET: -rw-r--r-- 1 boinc boinc 8541 jan 8 11:16 start_atlas.sh
wo 8 jan 2020 12:01:08 CET: -rw-r--r-- 1 boinc boinc 815 jan 8 11:16 RTE.tar.gz
wo 8 jan 2020 12:01:08 CET: -rw-r--r-- 1 boinc boinc 275410 jan 8 11:16 input.tar.gz
wo 8 jan 2020 12:01:08 CET: -rw-r--r-- 1 boinc boinc 365251149 jan 8 11:16 EVNT.14296418._001447.pool.root.1
wo 8 jan 2020 12:01:08 CET: -rw-r--r-- 1 boinc boinc 2928 jan 8 11:16 pandaJob.out
wo 8 jan 2020 12:01:08 CET: drwxr-xr-x 3 boinc boinc 4096 jan 8 11:18 APPS
wo 8 jan 2020 12:01:08 CET: -rw------- 1 boinc boinc 3686374 jan 8 11:18 agis_schedconf.cvmfs.json
wo 8 jan 2020 12:01:08 CET: -rw------- 1 boinc boinc 7741048 jan 8 11:18 agis_ddmendpoints.json
wo 8 jan 2020 12:01:08 CET: drwx------ 3 boinc boinc 4096 jan 8 11:18 pilot2
wo 8 jan 2020 12:01:08 CET: -rw-r--r-- 1 boinc boinc 535 jan 8 11:47 boinc_task_state.xml
wo 8 jan 2020 12:01:08 CET: -rw------- 1 boinc boinc 9091085 jan 8 11:59 HITS.000649-39889-8129._078090.pool.root.1
wo 8 jan 2020 12:01:08 CET: -rw------- 1 boinc boinc 786 jan 8 12:00 memory_monitor_summary.json
wo 8 jan 2020 12:01:08 CET: -rw------- 1 boinc boinc 737055 jan 8 12:00 log.000649-39889-8129._078090.job.log.tgz.1
wo 8 jan 2020 12:01:08 CET: -rw------- 1 boinc boinc 10961 jan 8 12:00 heartbeat.json
wo 8 jan 2020 12:01:08 CET: -rw------- 1 boinc boinc 8984 jan 8 12:01 pilotlog.txt
wo 8 jan 2020 12:01:08 CET: -rw------- 1 boinc boinc 238839 jan 8 12:01 log.000649-39889-8129._078090.job.log.1
wo 8 jan 2020 12:01:08 CET: -rw------- 1 boinc boinc 502 jan 8 12:01 nfBODm5W48vnShfckohDCDFpABFKDmABFKDmzgDXDmABFKDmOr4Jgm.diag
wo 8 jan 2020 12:01:08 CET: -rw------- 1 boinc boinc 490 jan 8 12:01 output.list
wo 8 jan 2020 12:01:08 CET: -rw-r--r-- 1 boinc boinc 733 jan 8 12:01 runtime_log
wo 8 jan 2020 12:01:08 CET: -rw------- 1 boinc boinc 993280 jan 8 12:01 result.tar.gz
wo 8 jan 2020 12:01:08 CET: -rw-r--r-- 1 boinc boinc 7411 jan 8 12:01 runtime_log.err
wo 8 jan 2020 12:01:08 CET: -rw-r--r-- 1 boinc boinc 8192 jan 8 12:01 boinc_mmap_file
wo 8 jan 2020 12:01:08 CET: -rw-r--r-- 1 boinc boinc 26 jan 8 12:01 wrapper_checkpoint.txt
wo 8 jan 2020 12:01:08 CET: -rw-r--r-- 1 boinc boinc 2636 jan 8 12:01 stderr.txt
wo 8 jan 2020 12:01:08 CET: HITS file was successfully produced:
wo 8 jan 2020 12:01:08 CET: -rw------- 1 boinc boinc 9091085 jan 8 11:59 shared/HITS.pool.root.1
wo 8 jan 2020 12:01:08 CET: *** Contents of shared directory: ***
wo 8 jan 2020 12:01:08 CET: total 366836
wo 8 jan 2020 12:01:08 CET: -rw-r--r-- 1 boinc boinc 8541 jan 8 11:15 start_atlas.sh
wo 8 jan 2020 12:01:08 CET: -rw-r--r-- 1 boinc boinc 815 jan 8 11:15 RTE.tar.gz
wo 8 jan 2020 12:01:08 CET: -rw-r--r-- 1 boinc boinc 275410 jan 8 11:15 input.tar.gz
wo 8 jan 2020 12:01:08 CET: -rw-r--r-- 1 boinc boinc 365251149 jan 8 11:15 ATLAS.root_0
wo 8 jan 2020 12:01:08 CET: -rw------- 1 boinc boinc 9091085 jan 8 11:59 HITS.pool.root.1
wo 8 jan 2020 12:01:08 CET: -rw------- 1 boinc boinc 993280 jan 8 12:01 result.tar.gz
</stderr_txt>
]]>
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