Name | bO5NDmluoDwnShfckohDCDFpABFKDmABFKDmx9YMDmABFKDmw4QQjm_0 |
Workunit | 1973454 |
Created | 20 Jan 2020, 16:17:15 UTC |
Sent | 20 Jan 2020, 21:27:48 UTC |
Report deadline | 27 Jan 2020, 21:27:48 UTC |
Received | 20 Jan 2020, 22:11:19 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 3848 |
Run time | 41 min 26 sec |
CPU time | 52 min 25 sec |
Validate state | Valid |
Credit | 26.80 |
Device peak FLOPS | 4.66 GFLOPS |
Application version | ATLAS Simulation v1.00 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.80 GB |
Peak swap size | 2.56 GB |
Peak disk usage | 717.81 MB |
<core_client_version>7.16.1</core_client_version> <![CDATA[ <stderr_txt> 22:29:38 (23495): wrapper (7.7.26015): starting 22:29:38 (23495): wrapper: running run_atlas (--nthreads 2) Mo 20. Jan 22:29:38 CET 2020: Arguments: --nthreads 2 Mo 20. Jan 22:29:38 CET 2020: Threads: 2 Mo 20. Jan 22:29:38 CET 2020: Checking for CVMFS Mo 20. Jan 22:29:38 CET 2020: Probing /cvmfs/atlas.cern.ch... OK Mo 20. Jan 22:29:38 CET 2020: Probing /cvmfs/atlas-condb.cern.ch... OK Mo 20. Jan 22:29:39 CET 2020: Probing /cvmfs/grid.cern.ch... OK Mo 20. Jan 22:29:39 CET 2020: Probing /cvmfs/cernvm-prod.cern.ch... OK Mo 20. Jan 22:29:39 CET 2020: Probing /cvmfs/sft.cern.ch... OK Mo 20. Jan 22:29:40 CET 2020: Probing /cvmfs/alice.cern.ch... OK Mo 20. Jan 22:29:40 CET 2020: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE Mo 20. Jan 22:29:40 CET 2020: 2.7.0.0 3040 9297 82104 59406 0 61 1938776 4194305 589 65024 0 62771 91.7796 946423 1537 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1 Mo 20. Jan 22:29:40 CET 2020: CVMFS is ok Mo 20. Jan 22:29:40 CET 2020: Using singularity image /cvmfs/atlas.cern.ch/repo/containers/images/singularity/x86_64-centos7.img Mo 20. Jan 22:29:40 CET 2020: Checking for singularity binary... Mo 20. Jan 22:29:40 CET 2020: Using singularity found in PATH at /usr/bin/singularity Mo 20. Jan 22:29:40 CET 2020: Running /usr/bin/singularity --version Mo 20. Jan 22:29:40 CET 2020: singularity version 3.5.2-1.1.el7 Mo 20. Jan 22:29:40 CET 2020: Checking singularity works with /usr/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/images/singularity/x86_64-centos7.img hostname Mo 20. Jan 22:29:41 CET 2020: ryzcos7 Mo 20. Jan 22:29:41 CET 2020: Singularity works Mo 20. Jan 22:29:41 CET 2020: Set ATHENA_PROC_NUMBER=2 Mo 20. Jan 22:29:41 CET 2020: Starting ATLAS job with PandaID=4002876565 Mo 20. Jan 22:29:41 CET 2020: Running command: /usr/bin/singularity exec --pwd /var/lib/boinc/slots/0 -B /cvmfs,/var /cvmfs/atlas.cern.ch/repo/containers/images/singularity/x86_64-centos7.img sh start_atlas.sh Mo 20. Jan 23:11:02 CET 2020: *** The last 200 lines of the pilot log: *** Mo 20. Jan 23:11:02 CET 2020: "cpuTime": 3, Mo 20. Jan 23:11:02 CET 2020: "wallTime": 1 Mo 20. Jan 23:11:02 CET 2020: }, Mo 20. Jan 23:11:02 CET 2020: "preExe": { Mo 20. Jan 23:11:02 CET 2020: "cpuTime": 8, Mo 20. Jan 23:11:02 CET 2020: "wallTime": 35 Mo 20. Jan 23:11:02 CET 2020: }, Mo 20. Jan 23:11:02 CET 2020: "total": { Mo 20. Jan 23:11:02 CET 2020: "cpuTime": 167, Mo 20. Jan 23:11:02 CET 2020: "wallTime": 448 Mo 20. Jan 23:11:02 CET 2020: }, Mo 20. Jan 23:11:02 CET 2020: "validation": { Mo 20. Jan 23:11:02 CET 2020: "cpuTime": 0, Mo 20. Jan 23:11:02 CET 2020: "wallTime": 0 Mo 20. Jan 23:11:02 CET 2020: }, Mo 20. Jan 23:11:02 CET 2020: "wallTime": 412 Mo 20. Jan 23:11:02 CET 2020: } Mo 20. Jan 23:11:02 CET 2020: }, Mo 20. Jan 23:11:02 CET 2020: "machine": { Mo 20. Jan 23:11:02 CET 2020: "cpu_family": "23", Mo 20. Jan 23:11:02 CET 2020: "linux_distribution": [ Mo 20. Jan 23:11:02 CET 2020: "CentOS Linux", Mo 20. Jan 23:11:02 CET 2020: "7.6.1810", Mo 20. Jan 23:11:02 CET 2020: "Core" Mo 20. Jan 23:11:02 CET 2020: ], Mo 20. Jan 23:11:02 CET 2020: "model": "8", Mo 20. Jan 23:11:02 CET 2020: "model_name": "AMD Ryzen 7 2700 Eight-Core Processor", Mo 20. Jan 23:11:02 CET 2020: "node": "ryzcos7", Mo 20. Jan 23:11:02 CET 2020: "platform": "Linux-3.10.0-693.el7.x86_64-x86_64-with-centos-7.6.1810-Core" Mo 20. Jan 23:11:02 CET 2020: }, Mo 20. Jan 23:11:02 CET 2020: "transform": { Mo 20. Jan 23:11:02 CET 2020: "cpuEfficiency": 0.6739, Mo 20. Jan 23:11:02 CET 2020: "cpuPWEfficiency": 0.7102, Mo 20. Jan 23:11:02 CET 2020: "cpuTime": 11, Mo 20. Jan 23:11:02 CET 2020: "cpuTimeTotal": 3300, Mo 20. Jan 23:11:02 CET 2020: "externalCpuTime": 29, Mo 20. Jan 23:11:02 CET 2020: "processedEvents": 10, Mo 20. Jan 23:11:02 CET 2020: "trfPredata": null, Mo 20. Jan 23:11:02 CET 2020: "wallTime": 2312 Mo 20. Jan 23:11:02 CET 2020: } Mo 20. Jan 23:11:02 CET 2020: } Mo 20. Jan 23:11:02 CET 2020: } Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,182 | DEBUG | queue_monitor | pilot.util.auxiliary.4002876565 | update_server | xml:will send fileinfo Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,182 | DEBUG | queue_monitor | pilot.control.job | get_proper_state | state=finished Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,182 | DEBUG | queue_monitor | pilot.control.job | get_proper_state | serverstate=running Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,182 | DEBUG | queue_monitor | pilot.control.job | get_proper_state | serverstate=finished Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,183 | INFO | queue_monitor | pilot.control.job.4002876565 | send_state | pilot will not update the server (heartbeat message will be written to file) Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,183 | INFO | queue_monitor | pilot.control.job.4002876565 | send_state | job 4002876565 has finished - writing final server update Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,183 | DEBUG | queue_monitor | pilot.control.job.4002876565 | get_data_structure | building data structure to be sent to server with heartbeat Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,183 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | get_job_metrics | will not add max space = -353094221 B to job metrics Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,184 | DEBUG | queue_monitor | pilot.api.analytics | get_fitted_data | removing tails from data to be fitted Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,184 | INFO | queue_monitor | pilot.api.analytics | get_fitted_data | fitting pss+swap vs Time Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,185 | INFO | queue_monitor | pilot.api.analytics | get_fitted_data | current memory leak: -836.10 B/s (using 32 data points, chi2=6973144) Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,185 | DEBUG | queue_monitor | pilot.util.auxiliary.4002876565 | get_job_metrics | job metrics="coreCount=2 actualCoreCount=4 nEvents=10 leak=-836.10 chi2=6973144" Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,185 | INFO | queue_monitor | pilot.control.job.4002876565 | get_data_structure | total number of processed events: 10 (read) Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,186 | INFO | queue_monitor | pilot.user.atlas.utilities | get_memory_values | using path: /var/lib/boinc/slots/0/PanDA_Pilot-4002876565/memory_monitor_summary.json (trf name=prmon) Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,187 | DEBUG | queue_monitor | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'Max': {'rx_packets': 53544, 'nprocs': 7, 'nthreads': 1, 'rx_bytes': 45613999, 'wtime': 2340, 'rss': 5705644, 'write_bytes': 0, 'vmem': 8723300, 'read_bytes': 0, 'stime': 147, 'tx_bytes': 12782603, 'pss': 2238315, 'wchar': 0, 'rchar': 0, 'tx_packets': 30421, 'swap': 0, 'utime': 3039}, 'Avg': {'write_bytes': 0, 'nprocs': 6, 'nthreads': 0, 'rx_bytes': 19486, 'rx_packets': 22, 'vmem': 5903412, 'read_bytes': 0, 'swap': 0, 'tx_bytes': 5460, 'pss': 1601471, 'wchar': 0, 'rchar': 0, 'tx_packets': 12, 'rss': 3615290}} Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,187 | INFO | queue_monitor | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard info from prmon json Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,188 | INFO | queue_monitor | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard memory fields from prmon json Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,188 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | .............................. Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,188 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . Timing measurements: Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,188 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . get job = 0 s Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,188 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . initial setup = 1 s Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,188 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . payload setup = 0 s Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,188 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . total setup = 1 s Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,188 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . stage-in = 0 s Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,188 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . payload execution = 2386 s Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,189 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . stage-out = 3 s Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,189 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | .............................. Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,190 | DEBUG | queue_monitor | pilot.control.job.4002876565 | send_state | wrote heartbeat to file /var/lib/boinc/slots/0/heartbeat.json Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,191 | DEBUG | queue_monitor | pilot.control.job | queue_monitor | job 4002876565 was dequeued from the monitored payloads queue Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,191 | DEBUG | queue_monitor | pilot.control.job | queue_monitor | tmp job object deleted Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,212 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,213 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | job summary report Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,213 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | -------------------------------------------------- Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,213 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | PanDA job id: 4002876565 Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,213 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | task id: 000649-197212-17933 Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,213 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | errors: (none) Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,213 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | status: LOG_TRANSFER = DONE Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,213 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | pilot state: finished Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,213 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | transexitcode: 0 Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,213 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | exeerrorcode: 0 Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,213 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | exeerrordiag: Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,213 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | exitcode: 0 Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,213 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | exitmsg: OK Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,214 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | cpuconsumptiontime: 3198 s Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,214 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | nevents: 10 Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,214 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | neventsw: 0 Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,214 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | pid: 30386 Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,214 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | pgrp: 30386 Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,214 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | corecount: 2 Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,214 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | event service: False Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,214 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | -------------------------------------------------- Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,215 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,215 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue jobs has 0 job(s) Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,215 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue payloads has 0 job(s) Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,215 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue data_in has 0 job(s) Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,215 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue data_out has 0 job(s) Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,215 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue current_data_in has 0 job(s) Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,215 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue validated_jobs has 0 job(s) Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,215 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue validated_payloads has 0 job(s) Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,215 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue monitored_payloads has 0 job(s) Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,215 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue finished_jobs has 0 job(s) Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,215 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue finished_payloads has 0 job(s) Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,215 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue finished_data_in has 1 job(s) Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,216 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue finished_data_out has 0 job(s) Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,216 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue failed_jobs has 0 job(s) Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,216 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue failed_payloads has 0 job(s) Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,216 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue failed_data_in has 0 job(s) Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,216 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue failed_data_out has 0 job(s) Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,216 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue completed_jobs has 0 job(s) Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,216 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s) Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,216 | INFO | retrieve | pilot.control.job.4002876565 | has_job_completed | job 4002876565 has completed (purged errors) Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,216 | INFO | retrieve | pilot.util.processes | cleanup | overall cleanup function is called Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:04,221 | DEBUG | retrieve | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc/slots/0/PanDA_Pilot-4002876565 Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:05,224 | INFO | retrieve | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [30386] Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:05,224 | INFO | retrieve | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 30386 Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:05,225 | INFO | retrieve | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:06,227 | INFO | retrieve | pilot.util.processes | cleanup | collected zombie processes Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:06,227 | INFO | retrieve | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=30386 Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:06,308 | INFO | retrieve | pilot.util.processes | kill_processes | process IDs to be killed: [30386] (in reverse order) Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:06,391 | WARNING | retrieve | pilot.util.processes | kill_processes | found no corresponding commands to process id(s) Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:06,391 | INFO | retrieve | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:06,392 | INFO | retrieve | pilot.control.job | retrieve | ready for new job Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:06,392 | INFO | retrieve | root | retrieve | pilot has finished for previous job - re-establishing logging Mo 20. Jan 23:11:02 CET 2020: mpi4py not found Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:06,402 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner | **************************************** Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:06,403 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 2.3.4 (12) *** Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:06,403 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner | **************************************** Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:06,403 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner | Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:06,403 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner | pilot is running in a VM Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:06,403 | INFO | retrieve | pilot.util.auxiliary | display_architecture_info | architecture information: Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:06,530 | INFO | retrieve | pilot.util.auxiliary | display_architecture_info | Mo 20. Jan 23:11:02 CET 2020: LSB Version: :core-4.1-amd64:core-4.1-noarch Mo 20. Jan 23:11:02 CET 2020: Distributor ID: CentOS Mo 20. Jan 23:11:02 CET 2020: Description: CentOS Linux release 7.6.1810 (Core) Mo 20. Jan 23:11:02 CET 2020: Release: 7.6.1810 Mo 20. Jan 23:11:02 CET 2020: Codename: Core Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:06,530 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner | **************************************** Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:07,040 | DEBUG | retrieve | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc/slots/0 Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:07,088 | INFO | retrieve | pilot.util.monitoring | check_local_space | sufficient remaining disk space (7460618240 B) Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:07,089 | WARNING | retrieve | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:07,089 | DEBUG | retrieve | pilot.control.job | retrieve | [job] retrieve thread has finished Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:07,166 | DEBUG | data | pilot.control.data | control | data control ending since graceful_stop has been set Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:07,166 | DEBUG | data | pilot.control.data | control | [data] control thread has finished Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:07,226 | INFO | execute_payloads | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:07,255 | INFO | monitor | pilot.control.monitor | control | [monitor] control thread has ended Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:07,566 | DEBUG | payload | pilot.control.payload | control | payload control ending since graceful_stop has been set Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:07,567 | DEBUG | payload | pilot.control.payload | control | [payload] control thread has finished Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:07,581 | DEBUG | MainThread | pilot.workflow.generic | run | thread count now at 12 threads Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:07,581 | DEBUG | MainThread | pilot.workflow.generic | run | enumerate: [<_MainThread(MainThread, started 139784756082496)>, <ExcThread(job, started 139784593663744)>, <ExcThread(validate_post, started 139783602960128)>, <ExcThread(queue_monitor, started 139784181761792)>, <ExcThread(failed_post, started 139783594567424)>, <ExcThread(validate, started 139784585271040)>, <ExcThread(queue_monitoring, started 139784190154496)>, <ExcThread(copytool_out, started 139784206939904)>, <ExcThread(validate_pre, started 139784164976384)>, <ExcThread(copytool_in, started 139784173369088)>, <ExcThread(job_monitor, started 139784560092928)>, <ExcThread(create_data_payload, started 139784576878336)>] Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:07,768 | DEBUG | job | pilot.control.job | control | job control ending since graceful_stop has been set Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:07,768 | DEBUG | job | pilot.control.job | control | [job] control thread has finished Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:07,825 | WARNING | copytool_out | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:08,034 | INFO | failed_post | pilot.control.payload | failed_post | [payload] failed_post thread has finished Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:08,037 | INFO | validate_post | pilot.control.payload | validate_post | [payload] validate_post thread has finished Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:08,529 | DEBUG | copytool_in | pilot.control.data | copytool_in | [data] copytool_in thread has finished Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:08,529 | INFO | validate_pre | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:08,534 | DEBUG | validate | pilot.control.job | validate | [job] validate thread has finished Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:08,535 | DEBUG | create_data_payload | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:08,588 | DEBUG | MainThread | pilot.workflow.generic | run | thread count now at 5 threads Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:08,588 | DEBUG | MainThread | pilot.workflow.generic | run | enumerate: [<_MainThread(MainThread, started 139784756082496)>, <ExcThread(queue_monitor, started 139784181761792)>, <ExcThread(queue_monitoring, started 139784190154496)>, <ExcThread(copytool_out, started 139784206939904)>, <ExcThread(job_monitor, started 139784560092928)>] Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:08,827 | DEBUG | copytool_out | pilot.control.data | copytool_out | [data] copytool_out thread has finished Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:09,209 | WARNING | queue_monitor | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:09,209 | DEBUG | queue_monitor | pilot.control.job | queue_monitor | [job] queue monitor thread has finished Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:09,601 | DEBUG | MainThread | pilot.workflow.generic | run | thread count now at 3 threads Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:09,601 | DEBUG | MainThread | pilot.workflow.generic | run | enumerate: [<_MainThread(MainThread, started 139784756082496)>, <ExcThread(queue_monitoring, started 139784190154496)>, <ExcThread(job_monitor, started 139784560092928)>] Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:10,252 | WARNING | queue_monitoring | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:13,257 | DEBUG | queue_monitoring | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:13,676 | DEBUG | MainThread | pilot.workflow.generic | run | thread count now at 2 threads Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:10:13,676 | DEBUG | MainThread | pilot.workflow.generic | run | enumerate: [<_MainThread(MainThread, started 139784756082496)>, <ExcThread(job_monitor, started 139784560092928)>] Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:11:02,120 | WARNING | job_monitor | pilot.control.job | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 62 s) Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:11:02,120 | DEBUG | job_monitor | pilot.control.job | job_monitor | [job] job monitor thread has finished Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:11:02,197 | INFO | MainThread | pilot.workflow.generic | run | end of generic workflow (traces error code: 0) Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:11:02,198 | INFO | MainThread | root | wrap_up | traces error code: 0 Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:11:02,198 | INFO | MainThread | root | wrap_up | pilot has finished Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:11:02 UTC [wrapper] ==== pilot stdout END ==== Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:11:02 UTC [wrapper] ==== wrapper stdout RESUME ==== Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:11:02 UTC [wrapper] Pilot exit status: 0 Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:11:02 UTC [wrapper] STATUSCODE: 0 Mo 20. Jan 23:11:02 CET 2020: 2020-01-20 22:11:02 UTC [wrapper] apfmon messages muted Mo 20. Jan 23:11:02 CET 2020: ---- find pandaID.out ---- Mo 20. Jan 23:11:02 CET 2020: total 60 Mo 20. Jan 23:11:02 CET 2020: -rw-------. 1 boinc boinc 11357 Jul 25 16:38 LICENSE Mo 20. Jan 23:11:02 CET 2020: -rw-------. 1 boinc boinc 20 Sep 9 13:04 MANIFEST.IN Mo 20. Jan 23:11:02 CET 2020: -rw-------. 1 boinc boinc 8 Dec 12 19:00 PILOTVERSION Mo 20. Jan 23:11:02 CET 2020: -rw-------. 1 boinc boinc 2212 Nov 14 11:01 README.md Mo 20. Jan 23:11:02 CET 2020: -rw-------. 1 boinc boinc 221 Jul 25 16:38 TODO.md Mo 20. Jan 23:11:02 CET 2020: -rw-------. 1 boinc boinc 11 Jan 20 22:29 pandaIDs.out Mo 20. Jan 23:11:02 CET 2020: drwx------. 14 boinc boinc 216 Jan 20 22:29 pilot Mo 20. Jan 23:11:03 CET 2020: -rwx------. 1 boinc boinc 21225 Dec 12 19:00 pilot.py Mo 20. Jan 23:11:03 CET 2020: -rw-------. 1 boinc boinc 766 Oct 10 16:01 setup.py Mo 20. Jan 23:11:03 CET 2020: -rw-------. 1 boinc boinc 11 Jan 20 22:29 /var/lib/boinc/slots/0/pilot2/pandaIDs.out Mo 20. Jan 23:11:03 CET 2020: 4002876565 Mo 20. Jan 23:11:03 CET 2020: Mo 20. Jan 23:11:03 CET 2020: 2020-01-20 22:11:02 UTC [wrapper] Test setup, not cleaning Mo 20. Jan 23:11:03 CET 2020: 2020-01-20 22:11:02 UTC [wrapper] ==== wrapper stdout END ==== Mo 20. Jan 23:11:03 CET 2020: 2020-01-20 22:11:02 UTC [wrapper] ==== wrapper stderr END ==== Mo 20. Jan 23:11:03 CET 2020: 2020-01-20 22:11:02 UTC [wrapper] wrapper wrapperexiting ec=0, duration=2480 Mo 20. Jan 23:11:03 CET 2020: 2020-01-20 22:11:02 UTC [wrapper] apfmon messages muted Mo 20. Jan 23:11:03 CET 2020: *** Error codes and diagnostics *** Mo 20. Jan 23:11:03 CET 2020: "exeErrorCode": 0, Mo 20. Jan 23:11:03 CET 2020: "exeErrorDiag": "", Mo 20. Jan 23:11:03 CET 2020: "pilotErrorCode": 0, Mo 20. Jan 23:11:03 CET 2020: "pilotErrorDiag": "", Mo 20. Jan 23:11:03 CET 2020: *** Listing of results directory *** Mo 20. Jan 23:11:03 CET 2020: insgesamt 379052 Mo 20. Jan 23:11:03 CET 2020: -rw-r--r--. 1 boinc boinc 267260 20. Jan 16:32 pilot2.tar.gz Mo 20. Jan 23:11:03 CET 2020: -rw-r--r--. 1 boinc boinc 4492 20. Jan 17:15 queuedata.json Mo 20. Jan 23:11:03 CET 2020: -rwx------. 1 boinc boinc 12641 20. Jan 17:17 runpilot2-wrapper.sh Mo 20. Jan 23:11:03 CET 2020: -rw-r--r--. 1 boinc boinc 107 20. Jan 22:29 wrapper_26015_x86_64-pc-linux-gnu Mo 20. Jan 23:11:03 CET 2020: -rwxr-xr-x. 1 boinc boinc 5557 20. Jan 22:29 run_atlas Mo 20. Jan 23:11:03 CET 2020: -rw-r--r--. 1 boinc boinc 112 20. Jan 22:29 job.xml Mo 20. Jan 23:11:03 CET 2020: -rw-r--r--. 1 boinc boinc 5991 20. Jan 22:29 init_data.xml Mo 20. Jan 23:11:03 CET 2020: drwxrwx--x. 2 boinc boinc 86 20. Jan 22:29 shared Mo 20. Jan 23:11:03 CET 2020: -rw-r--r--. 1 boinc boinc 0 20. Jan 22:29 boinc_lockfile Mo 20. Jan 23:11:03 CET 2020: -rw-r--r--. 1 boinc boinc 8549 20. Jan 22:29 start_atlas.sh Mo 20. Jan 23:11:03 CET 2020: -rw-r--r--. 1 boinc boinc 815 20. Jan 22:29 RTE.tar.gz Mo 20. Jan 23:11:03 CET 2020: -rw-r--r--. 1 boinc boinc 275409 20. Jan 22:29 input.tar.gz Mo 20. Jan 23:11:03 CET 2020: -rw-r--r--. 1 boinc boinc 365251149 20. Jan 22:29 EVNT.14296418._001447.pool.root.1 Mo 20. Jan 23:11:03 CET 2020: -rw-r--r--. 1 boinc boinc 2948 20. Jan 22:29 pandaJob.out Mo 20. Jan 23:11:03 CET 2020: drwxr-xr-x. 3 boinc boinc 17 20. Jan 22:29 APPS Mo 20. Jan 23:11:03 CET 2020: -rw-------. 1 boinc boinc 3699157 20. Jan 22:29 agis_schedconf.cvmfs.json Mo 20. Jan 23:11:03 CET 2020: -rw-------. 1 boinc boinc 7792440 20. Jan 22:29 agis_ddmendpoints.json Mo 20. Jan 23:11:03 CET 2020: drwx------. 3 boinc boinc 229 20. Jan 22:29 pilot2 Mo 20. Jan 23:11:03 CET 2020: -rw-r--r--. 1 boinc boinc 535 20. Jan 22:57 boinc_task_state.xml Mo 20. Jan 23:11:03 CET 2020: -rw-------. 1 boinc boinc 9176612 20. Jan 23:09 HITS.000649-197212-17933._078090.pool.root.1 Mo 20. Jan 23:11:03 CET 2020: -rw-------. 1 boinc boinc 786 20. Jan 23:09 memory_monitor_summary.json Mo 20. Jan 23:11:03 CET 2020: -rw-------. 1 boinc boinc 518885 20. Jan 23:10 log.000649-197212-17933._078090.job.log.tgz.1 Mo 20. Jan 23:11:03 CET 2020: -rw-------. 1 boinc boinc 11662 20. Jan 23:10 heartbeat.json Mo 20. Jan 23:11:03 CET 2020: -rw-r--r--. 1 boinc boinc 26 20. Jan 23:10 wrapper_checkpoint.txt Mo 20. Jan 23:11:03 CET 2020: -rw-r--r--. 1 boinc boinc 8192 20. Jan 23:10 boinc_mmap_file Mo 20. Jan 23:11:03 CET 2020: -rw-------. 1 boinc boinc 8489 20. Jan 23:11 pilotlog.txt Mo 20. Jan 23:11:03 CET 2020: -rw-------. 1 boinc boinc 232728 20. Jan 23:11 log.000649-197212-17933._078090.job.log.1 Mo 20. Jan 23:11:03 CET 2020: -rw-------. 1 boinc boinc 490 20. Jan 23:11 bO5NDmluoDwnShfckohDCDFpABFKDmABFKDmx9YMDmABFKDmw4QQjm.diag Mo 20. Jan 23:11:03 CET 2020: -rw-------. 1 boinc boinc 496 20. Jan 23:11 output.list Mo 20. Jan 23:11:03 CET 2020: -rw-r--r--. 1 boinc boinc 7164 20. Jan 23:11 runtime_log.err Mo 20. Jan 23:11:03 CET 2020: -rw-r--r--. 1 boinc boinc 739 20. Jan 23:11 runtime_log Mo 20. Jan 23:11:03 CET 2020: -rw-------. 1 boinc boinc 778240 20. Jan 23:11 result.tar.gz Mo 20. Jan 23:11:03 CET 2020: -rw-r--r--. 1 boinc boinc 2213 20. Jan 23:11 stderr.txt Mo 20. Jan 23:11:03 CET 2020: HITS file was successfully produced: Mo 20. Jan 23:11:03 CET 2020: -rw-------. 1 boinc boinc 9176612 20. Jan 23:09 shared/HITS.pool.root.1 Mo 20. Jan 23:11:03 CET 2020: *** Contents of shared directory: *** Mo 20. Jan 23:11:03 CET 2020: insgesamt 366704 Mo 20. Jan 23:11:03 CET 2020: -rw-r--r--. 1 boinc boinc 365251149 20. Jan 22:29 ATLAS.root_0 Mo 20. Jan 23:11:03 CET 2020: -rw-r--r--. 1 boinc boinc 8549 20. Jan 22:29 start_atlas.sh Mo 20. Jan 23:11:03 CET 2020: -rw-r--r--. 1 boinc boinc 815 20. Jan 22:29 RTE.tar.gz Mo 20. Jan 23:11:03 CET 2020: -rw-r--r--. 1 boinc boinc 275409 20. Jan 22:29 input.tar.gz Mo 20. Jan 23:11:03 CET 2020: -rw-------. 1 boinc boinc 9176612 20. Jan 23:09 HITS.pool.root.1 Mo 20. Jan 23:11:03 CET 2020: -rw-------. 1 boinc boinc 778240 20. Jan 23:11 result.tar.gz 23:11:03 (23495): run_atlas exited; CPU time 3145.824883 23:11:03 (23495): called boinc_finish(0) </stderr_txt> ]]>
©2024 CERN