| Name | s9yLDmcatJwnShfckohDCDFpABFKDmABFKDmlHkVDmABFKDmPpwvKo_1 |
| Workunit | 1980555 |
| Created | 6 Feb 2020, 13:33:28 UTC |
| Sent | 8 Feb 2020, 6:25:28 UTC |
| Report deadline | 15 Feb 2020, 6:25:28 UTC |
| Received | 8 Feb 2020, 7:18:40 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 4064 |
| Run time | 51 min 37 sec |
| CPU time | 1 hours 12 min 23 sec |
| Validate state | Valid |
| Credit | 28.36 |
| Device peak FLOPS | 3.96 GFLOPS |
| Application version | ATLAS Simulation v1.03 (native_mt) x86_64-pc-linux-gnu |
| Peak working set size | 1.79 GB |
| Peak swap size | 4.94 GB |
| Peak disk usage | 730.60 MB |
Stderr output
<core_client_version>7.16.1</core_client_version>
<![CDATA[
<stderr_txt>
07:26:44 (16763): wrapper (7.7.26015): starting
07:26:44 (16763): wrapper: running run_atlas (--nthreads 2)
[2020-02-08 07:26:44] Arguments: --nthreads 2
[2020-02-08 07:26:44] Threads: 2
[2020-02-08 07:26:44] Checking for CVMFS
[2020-02-08 07:26:49] Probing /cvmfs/atlas.cern.ch... OK
[2020-02-08 07:26:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2020-02-08 07:26:50] Probing /cvmfs/grid.cern.ch... OK
[2020-02-08 07:26:50] Probing /cvmfs/cernvm-prod.cern.ch... OK
[2020-02-08 07:26:50] Probing /cvmfs/sft.cern.ch... OK
[2020-02-08 07:26:50] Probing /cvmfs/alice.cern.ch... OK
[2020-02-08 07:26:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2020-02-08 07:26:51] 2.7.0.0 2842 309 50936 60168 3 61 3490684 4194304 588 65024 0 127943 99.8359 160229 3597 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2020-02-08 07:26:51] CVMFS is ok
[2020-02-08 07:26:51] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/images/singularity/x86_64-centos7.img
[2020-02-08 07:26:51] Checking for singularity binary...
[2020-02-08 07:26:51] Using singularity found in PATH at /usr/bin/singularity
[2020-02-08 07:26:51] Running /usr/bin/singularity --version
[2020-02-08 07:26:51] singularity version 3.5.2-1.1.el7
[2020-02-08 07:26:51] Checking singularity works with /usr/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/images/singularity/x86_64-centos7.img hostname
[2020-02-08 07:26:51] FX8S
[2020-02-08 07:26:51] Singularity works
[2020-02-08 07:26:52] Set ATHENA_PROC_NUMBER=2
[2020-02-08 07:26:52] Starting ATLAS job with PandaID=4002876565
[2020-02-08 07:26:52] Running command: /usr/bin/singularity exec --pwd /var/lib/boinc/slots/1 -B /cvmfs,/var /cvmfs/atlas.cern.ch/repo/containers/images/singularity/x86_64-centos7.img sh start_atlas.sh
[2020-02-08 08:18:18] *** The last 200 lines of the pilot log: ***
[2020-02-08 08:18:18] "cpuTime": 1,
[2020-02-08 08:18:18] "wallTime": 1
[2020-02-08 08:18:18] },
[2020-02-08 08:18:18] "preExe": {
[2020-02-08 08:18:18] "cpuTime": 2,
[2020-02-08 08:18:18] "wallTime": 5
[2020-02-08 08:18:18] },
[2020-02-08 08:18:18] "total": {
[2020-02-08 08:18:18] "cpuTime": 104,
[2020-02-08 08:18:18] "wallTime": 166
[2020-02-08 08:18:18] },
[2020-02-08 08:18:18] "validation": {
[2020-02-08 08:18:18] "cpuTime": 0,
[2020-02-08 08:18:18] "wallTime": 0
[2020-02-08 08:18:18] },
[2020-02-08 08:18:18] "wallTime": 161
[2020-02-08 08:18:18] }
[2020-02-08 08:18:18] },
[2020-02-08 08:18:18] "machine": {
[2020-02-08 08:18:18] "cpu_family": "21",
[2020-02-08 08:18:18] "linux_distribution": [
[2020-02-08 08:18:18] "CentOS Linux",
[2020-02-08 08:18:18] "7.6.1810",
[2020-02-08 08:18:18] "Core"
[2020-02-08 08:18:18] ],
[2020-02-08 08:18:18] "model": "2",
[2020-02-08 08:18:18] "model_name": "AMD FX-8370E Eight-Core Processor",
[2020-02-08 08:18:18] "node": "FX8S",
[2020-02-08 08:18:18] "platform": "Linux-3.10.0-1062.el7.x86_64-x86_64-with-centos-7.6.1810-Core"
[2020-02-08 08:18:18] },
[2020-02-08 08:18:18] "transform": {
[2020-02-08 08:18:18] "cpuEfficiency": 0.7586,
[2020-02-08 08:18:18] "cpuPWEfficiency": 0.7795,
[2020-02-08 08:18:18] "cpuTime": 18,
[2020-02-08 08:18:18] "cpuTimeTotal": 4413,
[2020-02-08 08:18:18] "externalCpuTime": 48,
[2020-02-08 08:18:18] "processedEvents": 10,
[2020-02-08 08:18:18] "trfPredata": null,
[2020-02-08 08:18:18] "wallTime": 2821
[2020-02-08 08:18:18] }
[2020-02-08 08:18:18] }
[2020-02-08 08:18:18] }
[2020-02-08 08:18:18] 2020-02-08 07:17:23,491 | DEBUG | queue_monitor | pilot.util.auxiliary.4002876565 | update_server | xml:will send fileinfo
[2020-02-08 08:18:18] 2020-02-08 07:17:23,491 | DEBUG | queue_monitor | pilot.control.job | get_proper_state | state=finished
[2020-02-08 08:18:18] 2020-02-08 07:17:23,491 | DEBUG | queue_monitor | pilot.control.job | get_proper_state | serverstate=running
[2020-02-08 08:18:18] 2020-02-08 07:17:23,491 | DEBUG | queue_monitor | pilot.control.job | get_proper_state | serverstate=finished
[2020-02-08 08:18:18] 2020-02-08 07:17:23,491 | INFO | queue_monitor | pilot.control.job.4002876565 | send_state | pilot will not update the server (heartbeat message will be written to file)
[2020-02-08 08:18:18] 2020-02-08 07:17:23,492 | INFO | queue_monitor | pilot.control.job.4002876565 | send_state | job 4002876565 has finished - writing final server update
[2020-02-08 08:18:18] 2020-02-08 07:17:23,492 | DEBUG | queue_monitor | pilot.control.job.4002876565 | get_data_structure | building data structure to be sent to server with heartbeat
[2020-02-08 08:18:18] 2020-02-08 07:17:23,493 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | get_job_metrics | will not add max space = -352967245 B to job metrics
[2020-02-08 08:18:18] 2020-02-08 07:17:23,495 | DEBUG | queue_monitor | pilot.api.analytics | get_fitted_data | removing tails from data to be fitted
[2020-02-08 08:18:18] 2020-02-08 07:17:23,496 | INFO | queue_monitor | pilot.api.analytics | get_fitted_data | fitting pss+swap vs Time
[2020-02-08 08:18:18] 2020-02-08 07:17:23,496 | INFO | queue_monitor | pilot.api.analytics | get_fitted_data | current memory leak: -26.33 B/s (using 41 data points, chi2=4839497)
[2020-02-08 08:18:18] 2020-02-08 07:17:23,497 | DEBUG | queue_monitor | pilot.util.auxiliary.4002876565 | get_job_metrics | job metrics="coreCount=2 actualCoreCount=3 nEvents=10 leak=-26.33 chi2=4839497"
[2020-02-08 08:18:18] 2020-02-08 07:17:23,497 | INFO | queue_monitor | pilot.control.job.4002876565 | get_data_structure | total number of processed events: 10 (read)
[2020-02-08 08:18:18] 2020-02-08 07:17:23,498 | INFO | queue_monitor | pilot.user.atlas.utilities | get_memory_values | using path: /var/lib/boinc/slots/1/PanDA_Pilot-4002876565/memory_monitor_summary.json (trf name=prmon)
[2020-02-08 08:18:18] 2020-02-08 07:17:23,500 | DEBUG | queue_monitor | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'Max': {'rx_packets': 118573, 'nprocs': 7, 'nthreads': 1, 'rx_bytes': 73972857, 'wtime': 2915, 'rss': 5630512, 'write_bytes': 0, 'vmem': 8673676, 'read_bytes': 0, 'stime': 131, 'tx_bytes': 139256668, 'pss': 2238225, 'wchar': 0, 'rchar': 0, 'tx_packets': 114295, 'swap': 0, 'utime': 4253}, 'Avg': {'write_bytes': 0, 'nprocs': 6, 'nthreads': 0, 'rx_bytes': 25370, 'rx_packets': 40, 'vmem': 6443925, 'read_bytes': 0, 'swap': 0, 'tx_bytes': 47761, 'pss': 1761222, 'wchar': 0, 'rchar': 0, 'tx_packets': 39, 'rss': 3995496}}
[2020-02-08 08:18:18] 2020-02-08 07:17:23,500 | INFO | queue_monitor | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard info from prmon json
[2020-02-08 08:18:18] 2020-02-08 07:17:23,500 | INFO | queue_monitor | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard memory fields from prmon json
[2020-02-08 08:18:18] 2020-02-08 07:17:23,500 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | ..............................
[2020-02-08 08:18:18] 2020-02-08 07:17:23,500 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . Timing measurements:
[2020-02-08 08:18:18] 2020-02-08 07:17:23,501 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . get job = 2 s
[2020-02-08 08:18:18] 2020-02-08 07:17:23,501 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . initial setup = 5 s
[2020-02-08 08:18:18] 2020-02-08 07:17:23,501 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . payload setup = 0 s
[2020-02-08 08:18:18] 2020-02-08 07:17:23,501 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . total setup = 5 s
[2020-02-08 08:18:18] 2020-02-08 07:17:23,501 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . stage-in = 3 s
[2020-02-08 08:18:18] 2020-02-08 07:17:23,501 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . payload execution = 2979 s
[2020-02-08 08:18:18] 2020-02-08 07:17:23,501 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . stage-out = 3 s
[2020-02-08 08:18:18] 2020-02-08 07:17:23,501 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | ..............................
[2020-02-08 08:18:18] 2020-02-08 07:17:23,502 | DEBUG | queue_monitor | pilot.control.job.4002876565 | send_state | wrote heartbeat to file /var/lib/boinc/slots/1/heartbeat.json
[2020-02-08 08:18:18] 2020-02-08 07:17:23,503 | DEBUG | queue_monitor | pilot.control.job | queue_monitor | job 4002876565 was dequeued from the monitored payloads queue
[2020-02-08 08:18:18] 2020-02-08 07:17:23,503 | DEBUG | queue_monitor | pilot.control.job | queue_monitor | tmp job object deleted
[2020-02-08 08:18:18] 2020-02-08 07:17:23,532 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report |
[2020-02-08 08:18:18] 2020-02-08 07:17:23,532 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | job summary report
[2020-02-08 08:18:18] 2020-02-08 07:17:23,532 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | --------------------------------------------------
[2020-02-08 08:18:18] 2020-02-08 07:17:23,532 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | PanDA job id: 4002876565
[2020-02-08 08:18:18] 2020-02-08 07:17:23,533 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | task id: 000649-1605261-14225
[2020-02-08 08:18:18] 2020-02-08 07:17:23,533 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | errors: (none)
[2020-02-08 08:18:18] 2020-02-08 07:17:23,533 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | status: LOG_TRANSFER = DONE
[2020-02-08 08:18:18] 2020-02-08 07:17:23,533 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | pilot state: finished
[2020-02-08 08:18:18] 2020-02-08 07:17:23,533 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | transexitcode: 0
[2020-02-08 08:18:18] 2020-02-08 07:17:23,533 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | exeerrorcode: 0
[2020-02-08 08:18:18] 2020-02-08 07:17:23,533 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | exeerrordiag:
[2020-02-08 08:18:18] 2020-02-08 07:17:23,533 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | exitcode: 0
[2020-02-08 08:18:18] 2020-02-08 07:17:23,534 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | exitmsg: OK
[2020-02-08 08:18:18] 2020-02-08 07:17:23,534 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | cpuconsumptiontime: 4420 s
[2020-02-08 08:18:18] 2020-02-08 07:17:23,534 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | nevents: 10
[2020-02-08 08:18:18] 2020-02-08 07:17:23,534 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | neventsw: 0
[2020-02-08 08:18:18] 2020-02-08 07:17:23,534 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | pid: 23427
[2020-02-08 08:18:18] 2020-02-08 07:17:23,534 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | pgrp: 23427
[2020-02-08 08:18:18] 2020-02-08 07:17:23,534 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | corecount: 2
[2020-02-08 08:18:18] 2020-02-08 07:17:23,535 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | event service: False
[2020-02-08 08:18:18] 2020-02-08 07:17:23,535 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | --------------------------------------------------
[2020-02-08 08:18:18] 2020-02-08 07:17:23,535 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report |
[2020-02-08 08:18:18] 2020-02-08 07:17:23,535 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue jobs has 0 job(s)
[2020-02-08 08:18:18] 2020-02-08 07:17:23,535 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue payloads has 0 job(s)
[2020-02-08 08:18:18] 2020-02-08 07:17:23,535 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue data_in has 0 job(s)
[2020-02-08 08:18:18] 2020-02-08 07:17:23,535 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue data_out has 0 job(s)
[2020-02-08 08:18:18] 2020-02-08 07:17:23,535 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue current_data_in has 0 job(s)
[2020-02-08 08:18:18] 2020-02-08 07:17:23,536 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue validated_jobs has 0 job(s)
[2020-02-08 08:18:18] 2020-02-08 07:17:23,536 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue validated_payloads has 0 job(s)
[2020-02-08 08:18:18] 2020-02-08 07:17:23,536 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue monitored_payloads has 0 job(s)
[2020-02-08 08:18:18] 2020-02-08 07:17:23,536 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue finished_jobs has 0 job(s)
[2020-02-08 08:18:18] 2020-02-08 07:17:23,536 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue finished_payloads has 0 job(s)
[2020-02-08 08:18:18] 2020-02-08 07:17:23,536 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue finished_data_in has 1 job(s)
[2020-02-08 08:18:18] 2020-02-08 07:17:23,536 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue finished_data_out has 0 job(s)
[2020-02-08 08:18:18] 2020-02-08 07:17:23,537 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue failed_jobs has 0 job(s)
[2020-02-08 08:18:18] 2020-02-08 07:17:23,537 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue failed_payloads has 0 job(s)
[2020-02-08 08:18:18] 2020-02-08 07:17:23,537 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue failed_data_in has 0 job(s)
[2020-02-08 08:18:18] 2020-02-08 07:17:23,537 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue failed_data_out has 0 job(s)
[2020-02-08 08:18:18] 2020-02-08 07:17:23,537 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue completed_jobs has 0 job(s)
[2020-02-08 08:18:18] 2020-02-08 07:17:23,537 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s)
[2020-02-08 08:18:18] 2020-02-08 07:17:23,537 | INFO | retrieve | pilot.control.job.4002876565 | has_job_completed | job 4002876565 has completed (purged errors)
[2020-02-08 08:18:18] 2020-02-08 07:17:23,538 | INFO | retrieve | pilot.util.processes | cleanup | overall cleanup function is called
[2020-02-08 08:18:18] 2020-02-08 07:17:23,544 | DEBUG | retrieve | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc/slots/1/PanDA_Pilot-4002876565
[2020-02-08 08:18:18] 2020-02-08 07:17:24,546 | INFO | retrieve | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [23427]
[2020-02-08 08:18:18] 2020-02-08 07:17:24,547 | INFO | retrieve | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 23427
[2020-02-08 08:18:18] 2020-02-08 07:17:24,547 | INFO | retrieve | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes
[2020-02-08 08:18:18] 2020-02-08 07:17:25,553 | INFO | retrieve | pilot.util.processes | cleanup | collected zombie processes
[2020-02-08 08:18:18] 2020-02-08 07:17:25,553 | INFO | retrieve | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=23427
[2020-02-08 08:18:18] 2020-02-08 07:17:25,642 | INFO | retrieve | pilot.util.processes | kill_processes | process IDs to be killed: [23427] (in reverse order)
[2020-02-08 08:18:18] 2020-02-08 07:17:25,693 | WARNING | retrieve | pilot.util.processes | kill_processes | found no corresponding commands to process id(s)
[2020-02-08 08:18:18] 2020-02-08 07:17:25,693 | INFO | retrieve | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs
[2020-02-08 08:18:18] 2020-02-08 07:17:25,693 | INFO | retrieve | pilot.control.job | retrieve | ready for new job
[2020-02-08 08:18:18] 2020-02-08 07:17:25,693 | INFO | retrieve | root | retrieve | pilot has finished for previous job - re-establishing logging
[2020-02-08 08:18:18] mpi4py not found
[2020-02-08 08:18:18] 2020-02-08 07:17:25,701 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner | ****************************************
[2020-02-08 08:18:18] 2020-02-08 07:17:25,701 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 2.3.4 (12) ***
[2020-02-08 08:18:18] 2020-02-08 07:17:25,701 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner | ****************************************
[2020-02-08 08:18:18] 2020-02-08 07:17:25,701 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner |
[2020-02-08 08:18:18] 2020-02-08 07:17:25,701 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner | pilot is running in a VM
[2020-02-08 08:18:18] 2020-02-08 07:17:25,702 | INFO | retrieve | pilot.util.auxiliary | display_architecture_info | architecture information:
[2020-02-08 08:18:18] 2020-02-08 07:17:25,803 | INFO | retrieve | pilot.util.auxiliary | display_architecture_info |
[2020-02-08 08:18:18] LSB Version: :core-4.1-amd64:core-4.1-noarch
[2020-02-08 08:18:18] Distributor ID: CentOS
[2020-02-08 08:18:18] Description: CentOS Linux release 7.6.1810 (Core)
[2020-02-08 08:18:18] Release: 7.6.1810
[2020-02-08 08:18:18] Codename: Core
[2020-02-08 08:18:18] 2020-02-08 07:17:25,803 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner | ****************************************
[2020-02-08 08:18:18] 2020-02-08 07:17:26,306 | DEBUG | retrieve | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc/slots/1
[2020-02-08 08:18:18] 2020-02-08 07:17:26,329 | INFO | retrieve | pilot.util.monitoring | check_local_space | sufficient remaining disk space (10234101760 B)
[2020-02-08 08:18:18] 2020-02-08 07:17:26,330 | WARNING | retrieve | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job
[2020-02-08 08:18:18] 2020-02-08 07:17:26,330 | DEBUG | retrieve | pilot.control.job | retrieve | [job] retrieve thread has finished
[2020-02-08 08:18:18] 2020-02-08 07:17:26,344 | WARNING | copytool_out | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration
[2020-02-08 08:18:18] 2020-02-08 07:17:26,544 | INFO | execute_payloads | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished
[2020-02-08 08:18:18] 2020-02-08 07:17:26,555 | DEBUG | create_data_payload | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished
[2020-02-08 08:18:18] 2020-02-08 07:17:26,555 | DEBUG | data | pilot.control.data | control | data control ending since graceful_stop has been set
[2020-02-08 08:18:18] 2020-02-08 07:17:26,556 | DEBUG | data | pilot.control.data | control | [data] control thread has finished
[2020-02-08 08:18:18] 2020-02-08 07:17:26,562 | INFO | validate_pre | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished
[2020-02-08 08:18:18] 2020-02-08 07:17:26,743 | DEBUG | job | pilot.control.job | control | job control ending since graceful_stop has been set
[2020-02-08 08:18:18] 2020-02-08 07:17:26,743 | DEBUG | job | pilot.control.job | control | [job] control thread has finished
[2020-02-08 08:18:18] 2020-02-08 07:17:26,996 | DEBUG | validate | pilot.control.job | validate | [job] validate thread has finished
[2020-02-08 08:18:18] 2020-02-08 07:17:27,003 | DEBUG | copytool_in | pilot.control.data | copytool_in | [data] copytool_in thread has finished
[2020-02-08 08:18:18] 2020-02-08 07:17:27,024 | DEBUG | MainThread | pilot.workflow.generic | run | thread count now at 9 threads
[2020-02-08 08:18:18] 2020-02-08 07:17:27,024 | DEBUG | MainThread | pilot.workflow.generic | run | enumerate: [<_MainThread(MainThread, started 139889547208512)>, <ExcThread(job_monitor, started 139888879982336)>, <ExcThread(failed_post, started 139888871589632)>, <ExcThread(queue_monitor, started 139888863196928)>, <ExcThread(copytool_out, started 139889282635520)>, <ExcThread(validate_post, started 139888888375040)>, <ExcThread(queue_monitoring, started 139889257457408)>, <ExcThread(monitor, started 139888896767744)>, <ExcThread(payload, started 139889291028224)>]
[2020-02-08 08:18:18] 2020-02-08 07:17:27,056 | INFO | monitor | pilot.control.monitor | control | [monitor] control thread has ended
[2020-02-08 08:18:18] 2020-02-08 07:17:27,149 | DEBUG | payload | pilot.control.payload | control | payload control ending since graceful_stop has been set
[2020-02-08 08:18:18] 2020-02-08 07:17:27,149 | DEBUG | payload | pilot.control.payload | control | [payload] control thread has finished
[2020-02-08 08:18:18] 2020-02-08 07:17:27,345 | DEBUG | copytool_out | pilot.control.data | copytool_out | [data] copytool_out thread has finished
[2020-02-08 08:18:18] 2020-02-08 07:17:27,405 | INFO | failed_post | pilot.control.payload | failed_post | [payload] failed_post thread has finished
[2020-02-08 08:18:18] 2020-02-08 07:17:27,517 | INFO | validate_post | pilot.control.payload | validate_post | [payload] validate_post thread has finished
[2020-02-08 08:18:18] 2020-02-08 07:17:28,030 | DEBUG | MainThread | pilot.workflow.generic | run | thread count now at 4 threads
[2020-02-08 08:18:18] 2020-02-08 07:17:28,030 | DEBUG | MainThread | pilot.workflow.generic | run | enumerate: [<_MainThread(MainThread, started 139889547208512)>, <ExcThread(job_monitor, started 139888879982336)>, <ExcThread(queue_monitor, started 139888863196928)>, <ExcThread(queue_monitoring, started 139889257457408)>]
[2020-02-08 08:18:18] 2020-02-08 07:17:28,373 | WARNING | queue_monitoring | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration
[2020-02-08 08:18:18] 2020-02-08 07:17:28,513 | WARNING | queue_monitor | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration
[2020-02-08 08:18:18] 2020-02-08 07:17:28,513 | DEBUG | queue_monitor | pilot.control.job | queue_monitor | [job] queue monitor thread has finished
[2020-02-08 08:18:18] 2020-02-08 07:17:29,043 | DEBUG | MainThread | pilot.workflow.generic | run | thread count now at 3 threads
[2020-02-08 08:18:18] 2020-02-08 07:17:29,044 | DEBUG | MainThread | pilot.workflow.generic | run | enumerate: [<_MainThread(MainThread, started 139889547208512)>, <ExcThread(job_monitor, started 139888879982336)>, <ExcThread(queue_monitoring, started 139889257457408)>]
[2020-02-08 08:18:18] 2020-02-08 07:17:31,377 | DEBUG | queue_monitoring | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished
[2020-02-08 08:18:18] 2020-02-08 07:17:32,065 | DEBUG | MainThread | pilot.workflow.generic | run | thread count now at 2 threads
[2020-02-08 08:18:18] 2020-02-08 07:17:32,065 | DEBUG | MainThread | pilot.workflow.generic | run | enumerate: [<_MainThread(MainThread, started 139889547208512)>, <ExcThread(job_monitor, started 139888879982336)>]
[2020-02-08 08:18:18] 2020-02-08 07:18:18,066 | WARNING | job_monitor | pilot.control.job | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 62 s)
[2020-02-08 08:18:18] 2020-02-08 07:18:18,066 | DEBUG | job_monitor | pilot.control.job | job_monitor | [job] job monitor thread has finished
[2020-02-08 08:18:18] 2020-02-08 07:18:18,488 | INFO | MainThread | pilot.workflow.generic | run | end of generic workflow (traces error code: 0)
[2020-02-08 08:18:18] 2020-02-08 07:18:18,488 | INFO | MainThread | root | wrap_up | traces error code: 0
[2020-02-08 08:18:18] 2020-02-08 07:18:18,489 | INFO | MainThread | root | wrap_up | pilot has finished
[2020-02-08 08:18:18] 2020-02-08 07:18:18 UTC [wrapper] ==== pilot stdout END ====
[2020-02-08 08:18:18] 2020-02-08 07:18:18 UTC [wrapper] ==== wrapper stdout RESUME ====
[2020-02-08 08:18:18] 2020-02-08 07:18:18 UTC [wrapper] Pilot exit status: 0
[2020-02-08 08:18:18] 2020-02-08 07:18:18 UTC [wrapper] STATUSCODE: 0
[2020-02-08 08:18:18] 2020-02-08 07:18:18 UTC [wrapper] apfmon messages muted
[2020-02-08 08:18:18] ---- find pandaID.out ----
[2020-02-08 08:18:18] total 60
[2020-02-08 08:18:18] -rw-------. 1 boinc boinc 11357 Jul 25 2019 LICENSE
[2020-02-08 08:18:18] -rw-------. 1 boinc boinc 20 Sep 9 13:04 MANIFEST.IN
[2020-02-08 08:18:18] -rw-------. 1 boinc boinc 8 Dec 12 19:00 PILOTVERSION
[2020-02-08 08:18:18] -rw-------. 1 boinc boinc 2212 Nov 14 11:01 README.md
[2020-02-08 08:18:18] -rw-------. 1 boinc boinc 221 Jul 25 2019 TODO.md
[2020-02-08 08:18:18] -rw-------. 1 boinc boinc 11 Feb 8 07:27 pandaIDs.out
[2020-02-08 08:18:18] drwx------. 14 boinc boinc 216 Feb 8 07:27 pilot
[2020-02-08 08:18:18] -rwx------. 1 boinc boinc 21225 Dec 12 19:00 pilot.py
[2020-02-08 08:18:18] -rw-------. 1 boinc boinc 766 Oct 10 16:01 setup.py
[2020-02-08 08:18:18] -rw-------. 1 boinc boinc 11 Feb 8 07:27 /var/lib/boinc/slots/1/pilot2/pandaIDs.out
[2020-02-08 08:18:18] 4002876565
[2020-02-08 08:18:18]
[2020-02-08 08:18:18] 2020-02-08 07:18:18 UTC [wrapper] Test setup, not cleaning
[2020-02-08 08:18:18] 2020-02-08 07:18:18 UTC [wrapper] ==== wrapper stdout END ====
[2020-02-08 08:18:18] 2020-02-08 07:18:18 UTC [wrapper] ==== wrapper stderr END ====
[2020-02-08 08:18:18] 2020-02-08 07:18:18 UTC [wrapper] wrapper wrapperexiting ec=0, duration=3085
[2020-02-08 08:18:18] 2020-02-08 07:18:18 UTC [wrapper] apfmon messages muted
[2020-02-08 08:18:18] *** Error codes and diagnostics ***
[2020-02-08 08:18:18] "exeErrorCode": 0,
[2020-02-08 08:18:18] "exeErrorDiag": "",
[2020-02-08 08:18:18] "pilotErrorCode": 0,
[2020-02-08 08:18:18] "pilotErrorDiag": "",
[2020-02-08 08:18:18] *** Listing of results directory ***
[2020-02-08 08:18:18] insgesamt 379020
[2020-02-08 08:18:18] -rw-r--r--. 1 boinc boinc 267260 6. Feb 11:21 pilot2.tar.gz
[2020-02-08 08:18:18] -rw-r--r--. 1 boinc boinc 4492 6. Feb 11:28 queuedata.json
[2020-02-08 08:18:18] -rwx------. 1 boinc boinc 12641 6. Feb 11:29 runpilot2-wrapper.sh
[2020-02-08 08:18:18] -rw-r--r--. 1 boinc boinc 107 8. Feb 07:26 wrapper_26015_x86_64-pc-linux-gnu
[2020-02-08 08:18:18] -rwxr-xr-x. 1 boinc boinc 5573 8. Feb 07:26 run_atlas
[2020-02-08 08:18:18] -rw-r--r--. 1 boinc boinc 112 8. Feb 07:26 job.xml
[2020-02-08 08:18:18] drwxrwx--x. 2 boinc boinc 86 8. Feb 07:26 shared
[2020-02-08 08:18:18] -rw-r--r--. 1 boinc boinc 5903 8. Feb 07:26 init_data.xml
[2020-02-08 08:18:18] -rw-r--r--. 1 boinc boinc 0 8. Feb 07:26 boinc_lockfile
[2020-02-08 08:18:18] -rw-r--r--. 1 boinc boinc 275409 8. Feb 07:26 input.tar.gz
[2020-02-08 08:18:18] -rw-r--r--. 1 boinc boinc 365251149 8. Feb 07:26 EVNT.14296418._001447.pool.root.1
[2020-02-08 08:18:18] -rw-r--r--. 1 boinc boinc 8553 8. Feb 07:26 start_atlas.sh
[2020-02-08 08:18:18] -rw-r--r--. 1 boinc boinc 926 8. Feb 07:26 RTE.tar.gz
[2020-02-08 08:18:18] -rw-r--r--. 1 boinc boinc 2958 8. Feb 07:26 pandaJob.out
[2020-02-08 08:18:18] drwxr-xr-x. 3 boinc boinc 17 8. Feb 07:26 APPS
[2020-02-08 08:18:18] -rw-------. 1 boinc boinc 3642762 8. Feb 07:27 agis_schedconf.cvmfs.json
[2020-02-08 08:18:18] -rw-------. 1 boinc boinc 7858464 8. Feb 07:27 agis_ddmendpoints.json
[2020-02-08 08:18:18] drwx------. 3 boinc boinc 229 8. Feb 07:27 pilot2
[2020-02-08 08:18:18] -rw-r--r--. 1 boinc boinc 535 8. Feb 08:06 boinc_task_state.xml
[2020-02-08 08:18:18] -rw-------. 1 boinc boinc 9055728 8. Feb 08:16 HITS.000649-1605261-14225._078090.pool.root.1
[2020-02-08 08:18:18] -rw-------. 1 boinc boinc 790 8. Feb 08:17 memory_monitor_summary.json
[2020-02-08 08:18:18] -rw-------. 1 boinc boinc 517478 8. Feb 08:17 log.000649-1605261-14225._078090.job.log.tgz.1
[2020-02-08 08:18:18] -rw-------. 1 boinc boinc 12294 8. Feb 08:17 heartbeat.json
[2020-02-08 08:18:18] -rw-r--r--. 1 boinc boinc 26 8. Feb 08:17 wrapper_checkpoint.txt
[2020-02-08 08:18:18] -rw-r--r--. 1 boinc boinc 8192 8. Feb 08:17 boinc_mmap_file
[2020-02-08 08:18:18] -rw-------. 1 boinc boinc 8278 8. Feb 08:18 pilotlog.txt
[2020-02-08 08:18:18] -rw-------. 1 boinc boinc 258872 8. Feb 08:18 log.000649-1605261-14225._078090.job.log.1
[2020-02-08 08:18:18] -rw-------. 1 boinc boinc 487 8. Feb 08:18 s9yLDmcatJwnShfckohDCDFpABFKDmABFKDmlHkVDmABFKDmPpwvKo.diag
[2020-02-08 08:18:18] -rw-------. 1 boinc boinc 499 8. Feb 08:18 output.list
[2020-02-08 08:18:18] -rw-r--r--. 1 boinc boinc 7321 8. Feb 08:18 runtime_log.err
[2020-02-08 08:18:18] -rw-r--r--. 1 boinc boinc 742 8. Feb 08:18 runtime_log
[2020-02-08 08:18:18] -rw-------. 1 boinc boinc 798720 8. Feb 08:18 result.tar.gz
[2020-02-08 08:18:18] -rw-r--r--. 1 boinc boinc 30608 8. Feb 08:18 stderr.txt
[2020-02-08 08:18:18] HITS file was successfully produced:
[2020-02-08 08:18:18] -rw-------. 1 boinc boinc 9055728 8. Feb 08:16 shared/HITS.pool.root.1
[2020-02-08 08:18:18] *** Contents of shared directory: ***
[2020-02-08 08:18:18] insgesamt 366604
[2020-02-08 08:18:18] -rw-r--r--. 1 boinc boinc 8553 8. Feb 07:26 start_atlas.sh
[2020-02-08 08:18:18] -rw-r--r--. 1 boinc boinc 926 8. Feb 07:26 RTE.tar.gz
[2020-02-08 08:18:18] -rw-r--r--. 1 boinc boinc 275409 8. Feb 07:26 input.tar.gz
[2020-02-08 08:18:18] -rw-r--r--. 1 boinc boinc 365251149 8. Feb 07:26 ATLAS.root_0
[2020-02-08 08:18:18] -rw-------. 1 boinc boinc 9055728 8. Feb 08:16 HITS.pool.root.1
[2020-02-08 08:18:18] -rw-------. 1 boinc boinc 798720 8. Feb 08:18 result.tar.gz
08:18:20 (16763): run_atlas exited; CPU time 4343.884280
08:18:20 (16763): called boinc_finish(0)
</stderr_txt>
]]>
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