| Name | sABMDmNO3JwnShfckohDCDFpABFKDmABFKDmyiALDmkEFKDmb8ZBDo_0 |
| Workunit | 1980754 |
| Created | 6 Feb 2020, 20:57:35 UTC |
| Sent | 7 Feb 2020, 6:56:07 UTC |
| Report deadline | 14 Feb 2020, 6:56:07 UTC |
| Received | 7 Feb 2020, 8:27:17 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 4064 |
| Run time | 1 hours 28 min 33 sec |
| CPU time | 1 hours 31 min 54 sec |
| Validate state | Valid |
| Credit | 48.66 |
| Device peak FLOPS | 3.96 GFLOPS |
| Application version | ATLAS Simulation v1.03 (native_mt) x86_64-pc-linux-gnu |
| Peak working set size | 1.82 GB |
| Peak swap size | 2.55 GB |
| Peak disk usage | 721.84 MB |
Stderr output
<core_client_version>7.16.1</core_client_version>
<![CDATA[
<stderr_txt>
07:57:49 (4378): wrapper (7.7.26015): starting
07:57:49 (4378): wrapper: running run_atlas (--nthreads 2)
[2020-02-07 07:57:49] Arguments: --nthreads 2
[2020-02-07 07:57:49] Threads: 2
[2020-02-07 07:57:49] Checking for CVMFS
[2020-02-07 07:57:50] Probing /cvmfs/atlas.cern.ch... OK
[2020-02-07 07:57:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2020-02-07 07:57:51] Probing /cvmfs/grid.cern.ch... OK
[2020-02-07 07:57:52] Probing /cvmfs/cernvm-prod.cern.ch... OK
[2020-02-07 07:57:52] Probing /cvmfs/sft.cern.ch... OK
[2020-02-07 07:57:53] Probing /cvmfs/alice.cern.ch... OK
[2020-02-07 07:57:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2020-02-07 07:57:55] 2.7.0.0 3569 3 28628 60124 0 1 2139309 4194304 0 65024 0 0 n/a 20938 6079 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2020-02-07 07:57:55] CVMFS is ok
[2020-02-07 07:57:55] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/images/singularity/x86_64-centos7.img
[2020-02-07 07:57:55] Checking for singularity binary...
[2020-02-07 07:57:55] Using singularity found in PATH at /usr/bin/singularity
[2020-02-07 07:57:55] Running /usr/bin/singularity --version
[2020-02-07 07:57:56] singularity version 3.5.2-1.1.el7
[2020-02-07 07:57:56] Checking singularity works with /usr/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/images/singularity/x86_64-centos7.img hostname
[2020-02-07 07:58:15] FX8S
[2020-02-07 07:58:15] Singularity works
[2020-02-07 07:58:18] Set ATHENA_PROC_NUMBER=2
[2020-02-07 07:58:18] Starting ATLAS job with PandaID=4002876565
[2020-02-07 07:58:18] Running command: /usr/bin/singularity exec --pwd /var/lib/boinc/slots/0 -B /cvmfs,/var /cvmfs/atlas.cern.ch/repo/containers/images/singularity/x86_64-centos7.img sh start_atlas.sh
[2020-02-07 09:26:18] *** The last 200 lines of the pilot log: ***
[2020-02-07 09:26:18] },
[2020-02-07 09:26:18] "preExe": {
[2020-02-07 09:26:18] "cpuTime": 18,
[2020-02-07 09:26:18] "wallTime": 47
[2020-02-07 09:26:18] },
[2020-02-07 09:26:18] "total": {
[2020-02-07 09:26:18] "cpuTime": 452,
[2020-02-07 09:26:18] "wallTime": 988
[2020-02-07 09:26:18] },
[2020-02-07 09:26:18] "validation": {
[2020-02-07 09:26:18] "cpuTime": 0,
[2020-02-07 09:26:18] "wallTime": 0
[2020-02-07 09:26:18] },
[2020-02-07 09:26:18] "wallTime": 939
[2020-02-07 09:26:18] }
[2020-02-07 09:26:18] },
[2020-02-07 09:26:18] "machine": {
[2020-02-07 09:26:18] "cpu_family": "21",
[2020-02-07 09:26:18] "linux_distribution": [
[2020-02-07 09:26:18] "CentOS Linux",
[2020-02-07 09:26:18] "7.6.1810",
[2020-02-07 09:26:18] "Core"
[2020-02-07 09:26:18] ],
[2020-02-07 09:26:18] "model": "2",
[2020-02-07 09:26:18] "model_name": "AMD FX-8370E Eight-Core Processor",
[2020-02-07 09:26:18] "node": "FX8S",
[2020-02-07 09:26:18] "platform": "Linux-3.10.0-1062.el7.x86_64-x86_64-with-centos-7.6.1810-Core"
[2020-02-07 09:26:18] },
[2020-02-07 09:26:18] "transform": {
[2020-02-07 09:26:18] "cpuEfficiency": 0.5987,
[2020-02-07 09:26:18] "cpuPWEfficiency": 0.651,
[2020-02-07 09:26:18] "cpuTime": 46,
[2020-02-07 09:26:18] "cpuTimeTotal": 6051,
[2020-02-07 09:26:18] "externalCpuTime": 198,
[2020-02-07 09:26:18] "processedEvents": 10,
[2020-02-07 09:26:18] "trfPredata": null,
[2020-02-07 09:26:18] "wallTime": 4584
[2020-02-07 09:26:18] }
[2020-02-07 09:26:18] }
[2020-02-07 09:26:18] }
[2020-02-07 09:26:18] 2020-02-07 08:25:55,241 | DEBUG | queue_monitor | pilot.util.auxiliary.4002876565 | update_server | xml:will send fileinfo
[2020-02-07 09:26:18] 2020-02-07 08:25:55,241 | DEBUG | queue_monitor | pilot.control.job | get_proper_state | state=finished
[2020-02-07 09:26:18] 2020-02-07 08:25:55,241 | DEBUG | queue_monitor | pilot.control.job | get_proper_state | serverstate=running
[2020-02-07 09:26:18] 2020-02-07 08:25:55,242 | DEBUG | queue_monitor | pilot.control.job | get_proper_state | serverstate=finished
[2020-02-07 09:26:18] 2020-02-07 08:25:55,242 | INFO | queue_monitor | pilot.control.job.4002876565 | send_state | pilot will not update the server (heartbeat message will be written to file)
[2020-02-07 09:26:18] 2020-02-07 08:25:55,242 | INFO | queue_monitor | pilot.control.job.4002876565 | send_state | job 4002876565 has finished - writing final server update
[2020-02-07 09:26:18] 2020-02-07 08:25:55,242 | DEBUG | queue_monitor | pilot.control.job.4002876565 | get_data_structure | building data structure to be sent to server with heartbeat
[2020-02-07 09:26:18] 2020-02-07 08:25:55,242 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | get_job_metrics | will not add max space = -353229389 B to job metrics
[2020-02-07 09:26:18] 2020-02-07 08:25:55,246 | DEBUG | queue_monitor | pilot.api.analytics | get_fitted_data | removing tails from data to be fitted
[2020-02-07 09:26:18] 2020-02-07 08:25:55,246 | INFO | queue_monitor | pilot.api.analytics | get_fitted_data | fitting pss+swap vs Time
[2020-02-07 09:26:18] 2020-02-07 08:25:55,247 | INFO | queue_monitor | pilot.api.analytics | get_fitted_data | current memory leak: -159.89 B/s (using 70 data points, chi2=33867770)
[2020-02-07 09:26:18] 2020-02-07 08:25:55,247 | DEBUG | queue_monitor | pilot.util.auxiliary.4002876565 | get_job_metrics | job metrics="coreCount=2 actualCoreCount=1 nEvents=10 leak=-159.89 chi2=33867770"
[2020-02-07 09:26:18] 2020-02-07 08:25:55,247 | INFO | queue_monitor | pilot.control.job.4002876565 | get_data_structure | total number of processed events: 10 (read)
[2020-02-07 09:26:18] 2020-02-07 08:25:55,249 | INFO | queue_monitor | pilot.user.atlas.utilities | get_memory_values | using path: /var/lib/boinc/slots/0/PanDA_Pilot-4002876565/memory_monitor_summary.json (trf name=prmon)
[2020-02-07 09:26:18] 2020-02-07 08:25:55,252 | DEBUG | queue_monitor | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'Max': {'rx_packets': 173436, 'nprocs': 10, 'nthreads': 1, 'rx_bytes': 181929994, 'wtime': 4778, 'rss': 5730428, 'write_bytes': 0, 'vmem': 8698092, 'read_bytes': 0, 'stime': 611, 'tx_bytes': 21542137, 'pss': 2345833, 'wchar': 0, 'rchar': 0, 'tx_packets': 59237, 'swap': 0, 'utime': 5197}, 'Avg': {'write_bytes': 0, 'nprocs': 6, 'nthreads': 0, 'rx_bytes': 38073, 'rx_packets': 36, 'vmem': 5212222, 'read_bytes': 0, 'swap': 0, 'tx_bytes': 4508, 'pss': 1458734, 'wchar': 0, 'rchar': 0, 'tx_packets': 12, 'rss': 3120013}}
[2020-02-07 09:26:18] 2020-02-07 08:25:55,252 | INFO | queue_monitor | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard info from prmon json
[2020-02-07 09:26:18] 2020-02-07 08:25:55,253 | INFO | queue_monitor | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard memory fields from prmon json
[2020-02-07 09:26:18] 2020-02-07 08:25:55,253 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | ..............................
[2020-02-07 09:26:18] 2020-02-07 08:25:55,253 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . Timing measurements:
[2020-02-07 09:26:18] 2020-02-07 08:25:55,253 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . get job = 2 s
[2020-02-07 09:26:18] 2020-02-07 08:25:55,253 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . initial setup = 4 s
[2020-02-07 09:26:18] 2020-02-07 08:25:55,253 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . payload setup = 0 s
[2020-02-07 09:26:18] 2020-02-07 08:25:55,253 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . total setup = 4 s
[2020-02-07 09:26:18] 2020-02-07 08:25:55,264 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . stage-in = 1 s
[2020-02-07 09:26:18] 2020-02-07 08:25:55,265 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . payload execution = 5115 s
[2020-02-07 09:26:18] 2020-02-07 08:25:55,265 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . stage-out = 6 s
[2020-02-07 09:26:18] 2020-02-07 08:25:55,265 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | ..............................
[2020-02-07 09:26:18] 2020-02-07 08:25:55,291 | DEBUG | queue_monitor | pilot.control.job.4002876565 | send_state | wrote heartbeat to file /var/lib/boinc/slots/0/heartbeat.json
[2020-02-07 09:26:18] 2020-02-07 08:25:55,291 | DEBUG | queue_monitor | pilot.control.job | queue_monitor | job 4002876565 was dequeued from the monitored payloads queue
[2020-02-07 09:26:18] 2020-02-07 08:25:55,291 | DEBUG | queue_monitor | pilot.control.job | queue_monitor | tmp job object deleted
[2020-02-07 09:26:18] 2020-02-07 08:25:55,325 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report |
[2020-02-07 09:26:18] 2020-02-07 08:25:55,325 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | job summary report
[2020-02-07 09:26:18] 2020-02-07 08:25:55,325 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | --------------------------------------------------
[2020-02-07 09:26:18] 2020-02-07 08:25:55,325 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | PanDA job id: 4002876565
[2020-02-07 09:26:18] 2020-02-07 08:25:55,326 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | task id: 000649-1749476-22752
[2020-02-07 09:26:18] 2020-02-07 08:25:55,326 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | errors: (none)
[2020-02-07 09:26:18] 2020-02-07 08:25:55,326 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | status: LOG_TRANSFER = DONE
[2020-02-07 09:26:18] 2020-02-07 08:25:55,326 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | pilot state: finished
[2020-02-07 09:26:18] 2020-02-07 08:25:55,326 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | transexitcode: 0
[2020-02-07 09:26:18] 2020-02-07 08:25:55,327 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | exeerrorcode: 0
[2020-02-07 09:26:18] 2020-02-07 08:25:55,327 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | exeerrordiag:
[2020-02-07 09:26:18] 2020-02-07 08:25:55,327 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | exitcode: 0
[2020-02-07 09:26:18] 2020-02-07 08:25:55,327 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | exitmsg: OK
[2020-02-07 09:26:18] 2020-02-07 08:25:55,327 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | cpuconsumptiontime: 6086 s
[2020-02-07 09:26:18] 2020-02-07 08:25:55,327 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | nevents: 10
[2020-02-07 09:26:18] 2020-02-07 08:25:55,327 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | neventsw: 0
[2020-02-07 09:26:18] 2020-02-07 08:25:55,328 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | pid: 11141
[2020-02-07 09:26:18] 2020-02-07 08:25:55,328 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | pgrp: 11141
[2020-02-07 09:26:18] 2020-02-07 08:25:55,328 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | corecount: 2
[2020-02-07 09:26:18] 2020-02-07 08:25:55,328 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | event service: False
[2020-02-07 09:26:18] 2020-02-07 08:25:55,328 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | --------------------------------------------------
[2020-02-07 09:26:18] 2020-02-07 08:25:55,328 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report |
[2020-02-07 09:26:18] 2020-02-07 08:25:55,328 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue jobs has 0 job(s)
[2020-02-07 09:26:18] 2020-02-07 08:25:55,329 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue payloads has 0 job(s)
[2020-02-07 09:26:18] 2020-02-07 08:25:55,329 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue data_in has 0 job(s)
[2020-02-07 09:26:18] 2020-02-07 08:25:55,329 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue data_out has 0 job(s)
[2020-02-07 09:26:18] 2020-02-07 08:25:55,329 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue current_data_in has 0 job(s)
[2020-02-07 09:26:18] 2020-02-07 08:25:55,329 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue validated_jobs has 0 job(s)
[2020-02-07 09:26:18] 2020-02-07 08:25:55,329 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue validated_payloads has 0 job(s)
[2020-02-07 09:26:18] 2020-02-07 08:25:55,330 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue monitored_payloads has 0 job(s)
[2020-02-07 09:26:18] 2020-02-07 08:25:55,330 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue finished_jobs has 0 job(s)
[2020-02-07 09:26:18] 2020-02-07 08:25:55,330 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue finished_payloads has 0 job(s)
[2020-02-07 09:26:18] 2020-02-07 08:25:55,330 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue finished_data_in has 1 job(s)
[2020-02-07 09:26:18] 2020-02-07 08:25:55,330 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue finished_data_out has 0 job(s)
[2020-02-07 09:26:18] 2020-02-07 08:25:55,330 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue failed_jobs has 0 job(s)
[2020-02-07 09:26:18] 2020-02-07 08:25:55,330 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue failed_payloads has 0 job(s)
[2020-02-07 09:26:18] 2020-02-07 08:25:55,330 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue failed_data_in has 0 job(s)
[2020-02-07 09:26:18] 2020-02-07 08:25:55,331 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue failed_data_out has 0 job(s)
[2020-02-07 09:26:18] 2020-02-07 08:25:55,331 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue completed_jobs has 0 job(s)
[2020-02-07 09:26:18] 2020-02-07 08:25:55,331 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s)
[2020-02-07 09:26:18] 2020-02-07 08:25:55,331 | INFO | retrieve | pilot.control.job.4002876565 | has_job_completed | job 4002876565 has completed (purged errors)
[2020-02-07 09:26:18] 2020-02-07 08:25:55,331 | INFO | retrieve | pilot.util.processes | cleanup | overall cleanup function is called
[2020-02-07 09:26:18] 2020-02-07 08:25:55,339 | DEBUG | retrieve | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc/slots/0/PanDA_Pilot-4002876565
[2020-02-07 09:26:18] 2020-02-07 08:25:56,340 | INFO | retrieve | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [11141]
[2020-02-07 09:26:18] 2020-02-07 08:25:56,340 | INFO | retrieve | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 11141
[2020-02-07 09:26:18] 2020-02-07 08:25:56,340 | INFO | retrieve | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes
[2020-02-07 09:26:18] 2020-02-07 08:25:57,347 | INFO | retrieve | pilot.util.processes | cleanup | collected zombie processes
[2020-02-07 09:26:18] 2020-02-07 08:25:57,348 | INFO | retrieve | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=11141
[2020-02-07 09:26:18] 2020-02-07 08:25:57,620 | INFO | retrieve | pilot.util.processes | kill_processes | process IDs to be killed: [11141] (in reverse order)
[2020-02-07 09:26:18] 2020-02-07 08:25:57,894 | WARNING | retrieve | pilot.util.processes | kill_processes | found no corresponding commands to process id(s)
[2020-02-07 09:26:18] 2020-02-07 08:25:57,895 | INFO | retrieve | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs
[2020-02-07 09:26:18] 2020-02-07 08:25:57,895 | INFO | retrieve | pilot.control.job | retrieve | ready for new job
[2020-02-07 09:26:18] 2020-02-07 08:25:57,895 | INFO | retrieve | root | retrieve | pilot has finished for previous job - re-establishing logging
[2020-02-07 09:26:18] mpi4py not found
[2020-02-07 09:26:18] 2020-02-07 08:25:57,974 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner | ****************************************
[2020-02-07 09:26:18] 2020-02-07 08:25:57,975 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 2.3.4 (12) ***
[2020-02-07 09:26:18] 2020-02-07 08:25:57,975 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner | ****************************************
[2020-02-07 09:26:18] 2020-02-07 08:25:57,975 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner |
[2020-02-07 09:26:18] 2020-02-07 08:25:57,975 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner | pilot is running in a VM
[2020-02-07 09:26:18] 2020-02-07 08:25:57,975 | INFO | retrieve | pilot.util.auxiliary | display_architecture_info | architecture information:
[2020-02-07 09:26:18] 2020-02-07 08:25:58,901 | INFO | retrieve | pilot.util.auxiliary | display_architecture_info |
[2020-02-07 09:26:18] LSB Version: :core-4.1-amd64:core-4.1-noarch
[2020-02-07 09:26:18] Distributor ID: CentOS
[2020-02-07 09:26:18] Description: CentOS Linux release 7.6.1810 (Core)
[2020-02-07 09:26:18] Release: 7.6.1810
[2020-02-07 09:26:18] Codename: Core
[2020-02-07 09:26:18] 2020-02-07 08:25:58,901 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner | ****************************************
[2020-02-07 09:26:18] 2020-02-07 08:25:59,404 | DEBUG | retrieve | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc/slots/0
[2020-02-07 09:26:18] 2020-02-07 08:25:59,463 | INFO | retrieve | pilot.util.monitoring | check_local_space | sufficient remaining disk space (10838081536 B)
[2020-02-07 09:26:18] 2020-02-07 08:25:59,464 | WARNING | retrieve | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job
[2020-02-07 09:26:18] 2020-02-07 08:25:59,464 | DEBUG | retrieve | pilot.control.job | retrieve | [job] retrieve thread has finished
[2020-02-07 09:26:18] 2020-02-07 08:25:59,588 | DEBUG | MainThread | pilot.workflow.generic | run | thread count now at 16 threads
[2020-02-07 09:26:18] 2020-02-07 08:25:59,589 | DEBUG | MainThread | pilot.workflow.generic | run | enumerate: [<_MainThread(MainThread, started 139760753268544)>, <ExcThread(job, started 139760589793024)>, <ExcThread(copytool_out, started 139760564614912)>, <ExcThread(validate_post, started 139760022570752)>, <ExcThread(data, started 139760573007616)>, <ExcThread(job_monitor, started 139760014178048)>, <ExcThread(execute_payloads, started 139759510877952)>, <ExcThread(validate, started 139760581400320)>, <ExcThread(queue_monitor, started 139760005785344)>, <ExcThread(copytool_in, started 139760039356160)>, <ExcThread(failed_post, started 139759997392640)>, <ExcThread(queue_monitoring, started 139760531044096)>, <ExcThread(validate_pre, started 139760539436800)>, <ExcThread(monitor, started 139760047748864)>, <ExcThread(create_data_payload, started 139760556222208)>, <ExcThread(payload, started 139760547829504)>]
[2020-02-07 09:26:18] 2020-02-07 08:25:59,693 | INFO | failed_post | pilot.control.payload | failed_post | [payload] failed_post thread has finished
[2020-02-07 09:26:18] 2020-02-07 08:25:59,740 | DEBUG | data | pilot.control.data | control | data control ending since graceful_stop has been set
[2020-02-07 09:26:18] 2020-02-07 08:25:59,740 | DEBUG | data | pilot.control.data | control | [data] control thread has finished
[2020-02-07 09:26:18] 2020-02-07 08:25:59,761 | INFO | monitor | pilot.control.monitor | control | [monitor] control thread has ended
[2020-02-07 09:26:18] 2020-02-07 08:26:00,002 | INFO | execute_payloads | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished
[2020-02-07 09:26:18] 2020-02-07 08:26:00,005 | DEBUG | create_data_payload | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished
[2020-02-07 09:26:18] 2020-02-07 08:26:00,038 | DEBUG | payload | pilot.control.payload | control | payload control ending since graceful_stop has been set
[2020-02-07 09:26:18] 2020-02-07 08:26:00,038 | DEBUG | payload | pilot.control.payload | control | [payload] control thread has finished
[2020-02-07 09:26:18] 2020-02-07 08:26:00,315 | WARNING | queue_monitor | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration
[2020-02-07 09:26:18] 2020-02-07 08:26:00,315 | DEBUG | queue_monitor | pilot.control.job | queue_monitor | [job] queue monitor thread has finished
[2020-02-07 09:26:18] 2020-02-07 08:26:00,466 | INFO | validate_post | pilot.control.payload | validate_post | [payload] validate_post thread has finished
[2020-02-07 09:26:18] 2020-02-07 08:26:00,693 | DEBUG | MainThread | pilot.workflow.generic | run | thread count now at 8 threads
[2020-02-07 09:26:18] 2020-02-07 08:26:00,693 | DEBUG | MainThread | pilot.workflow.generic | run | enumerate: [<_MainThread(MainThread, started 139760753268544)>, <ExcThread(job, started 139760589793024)>, <ExcThread(copytool_out, started 139760564614912)>, <ExcThread(job_monitor, started 139760014178048)>, <ExcThread(validate, started 139760581400320)>, <ExcThread(copytool_in, started 139760039356160)>, <ExcThread(queue_monitoring, started 139760531044096)>, <ExcThread(validate_pre, started 139760539436800)>]
[2020-02-07 09:26:18] 2020-02-07 08:26:00,725 | WARNING | copytool_out | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration
[2020-02-07 09:26:18] 2020-02-07 08:26:00,736 | DEBUG | validate | pilot.control.job | validate | [job] validate thread has finished
[2020-02-07 09:26:18] 2020-02-07 08:26:00,737 | INFO | validate_pre | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished
[2020-02-07 09:26:18] 2020-02-07 08:26:00,747 | DEBUG | copytool_in | pilot.control.data | copytool_in | [data] copytool_in thread has finished
[2020-02-07 09:26:18] 2020-02-07 08:26:00,759 | DEBUG | job | pilot.control.job | control | job control ending since graceful_stop has been set
[2020-02-07 09:26:18] 2020-02-07 08:26:00,759 | DEBUG | job | pilot.control.job | control | [job] control thread has finished
[2020-02-07 09:26:18] 2020-02-07 08:26:01,236 | WARNING | queue_monitoring | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration
[2020-02-07 09:26:18] 2020-02-07 08:26:01,699 | DEBUG | MainThread | pilot.workflow.generic | run | thread count now at 4 threads
[2020-02-07 09:26:18] 2020-02-07 08:26:01,699 | DEBUG | MainThread | pilot.workflow.generic | run | enumerate: [<_MainThread(MainThread, started 139760753268544)>, <ExcThread(copytool_out, started 139760564614912)>, <ExcThread(job_monitor, started 139760014178048)>, <ExcThread(queue_monitoring, started 139760531044096)>]
[2020-02-07 09:26:18] 2020-02-07 08:26:01,726 | DEBUG | copytool_out | pilot.control.data | copytool_out | [data] copytool_out thread has finished
[2020-02-07 09:26:18] 2020-02-07 08:26:02,704 | DEBUG | MainThread | pilot.workflow.generic | run | thread count now at 3 threads
[2020-02-07 09:26:18] 2020-02-07 08:26:02,705 | DEBUG | MainThread | pilot.workflow.generic | run | enumerate: [<_MainThread(MainThread, started 139760753268544)>, <ExcThread(job_monitor, started 139760014178048)>, <ExcThread(queue_monitoring, started 139760531044096)>]
[2020-02-07 09:26:18] 2020-02-07 08:26:04,238 | DEBUG | queue_monitoring | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished
[2020-02-07 09:26:18] 2020-02-07 08:26:04,712 | DEBUG | MainThread | pilot.workflow.generic | run | thread count now at 2 threads
[2020-02-07 09:26:18] 2020-02-07 08:26:04,712 | DEBUG | MainThread | pilot.workflow.generic | run | enumerate: [<_MainThread(MainThread, started 139760753268544)>, <ExcThread(job_monitor, started 139760014178048)>]
[2020-02-07 09:26:18] 2020-02-07 08:26:17,534 | WARNING | job_monitor | pilot.control.job | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 73 s)
[2020-02-07 09:26:18] 2020-02-07 08:26:17,535 | DEBUG | job_monitor | pilot.control.job | job_monitor | [job] job monitor thread has finished
[2020-02-07 09:26:18] 2020-02-07 08:26:17,772 | INFO | MainThread | pilot.workflow.generic | run | end of generic workflow (traces error code: 0)
[2020-02-07 09:26:18] 2020-02-07 08:26:17,772 | INFO | MainThread | root | wrap_up | traces error code: 0
[2020-02-07 09:26:18] 2020-02-07 08:26:17,772 | INFO | MainThread | root | wrap_up | pilot has finished
[2020-02-07 09:26:18] 2020-02-07 08:26:17 UTC [wrapper] ==== pilot stdout END ====
[2020-02-07 09:26:18] 2020-02-07 08:26:18 UTC [wrapper] ==== wrapper stdout RESUME ====
[2020-02-07 09:26:18] 2020-02-07 08:26:18 UTC [wrapper] Pilot exit status: 0
[2020-02-07 09:26:18] 2020-02-07 08:26:18 UTC [wrapper] STATUSCODE: 0
[2020-02-07 09:26:18] 2020-02-07 08:26:18 UTC [wrapper] apfmon messages muted
[2020-02-07 09:26:18] ---- find pandaID.out ----
[2020-02-07 09:26:18] total 60
[2020-02-07 09:26:18] -rw-------. 1 boinc boinc 11357 Jul 25 2019 LICENSE
[2020-02-07 09:26:18] -rw-------. 1 boinc boinc 20 Sep 9 13:04 MANIFEST.IN
[2020-02-07 09:26:18] -rw-------. 1 boinc boinc 8 Dec 12 19:00 PILOTVERSION
[2020-02-07 09:26:18] -rw-------. 1 boinc boinc 2212 Nov 14 11:01 README.md
[2020-02-07 09:26:18] -rw-------. 1 boinc boinc 221 Jul 25 2019 TODO.md
[2020-02-07 09:26:18] -rw-------. 1 boinc boinc 11 Feb 7 08:00 pandaIDs.out
[2020-02-07 09:26:18] drwx------. 14 boinc boinc 216 Feb 7 08:00 pilot
[2020-02-07 09:26:18] -rwx------. 1 boinc boinc 21225 Dec 12 19:00 pilot.py
[2020-02-07 09:26:18] -rw-------. 1 boinc boinc 766 Oct 10 16:01 setup.py
[2020-02-07 09:26:18] -rw-------. 1 boinc boinc 11 Feb 7 08:00 /var/lib/boinc/slots/0/pilot2/pandaIDs.out
[2020-02-07 09:26:18] 4002876565
[2020-02-07 09:26:18]
[2020-02-07 09:26:18] 2020-02-07 08:26:18 UTC [wrapper] Test setup, not cleaning
[2020-02-07 09:26:18] 2020-02-07 08:26:18 UTC [wrapper] ==== wrapper stdout END ====
[2020-02-07 09:26:18] 2020-02-07 08:26:18 UTC [wrapper] ==== wrapper stderr END ====
[2020-02-07 09:26:18] 2020-02-07 08:26:18 UTC [wrapper] wrapper wrapperexiting ec=0, duration=5273
[2020-02-07 09:26:18] 2020-02-07 08:26:18 UTC [wrapper] apfmon messages muted
[2020-02-07 09:26:18] *** Error codes and diagnostics ***
[2020-02-07 09:26:18] "exeErrorCode": 0,
[2020-02-07 09:26:18] "exeErrorDiag": "",
[2020-02-07 09:26:18] "pilotErrorCode": 0,
[2020-02-07 09:26:18] "pilotErrorDiag": "",
[2020-02-07 09:26:18] *** Listing of results directory ***
[2020-02-07 09:26:18] insgesamt 379228
[2020-02-07 09:26:18] -rw-r--r--. 1 boinc boinc 267260 6. Feb 21:30 pilot2.tar.gz
[2020-02-07 09:26:18] -rw-r--r--. 1 boinc boinc 4492 6. Feb 21:55 queuedata.json
[2020-02-07 09:26:18] -rwx------. 1 boinc boinc 12641 6. Feb 21:57 runpilot2-wrapper.sh
[2020-02-07 09:26:18] -rw-r--r--. 1 boinc boinc 107 7. Feb 07:57 wrapper_26015_x86_64-pc-linux-gnu
[2020-02-07 09:26:18] -rwxr-xr-x. 1 boinc boinc 5573 7. Feb 07:57 run_atlas
[2020-02-07 09:26:18] -rw-r--r--. 1 boinc boinc 112 7. Feb 07:57 job.xml
[2020-02-07 09:26:18] -rw-r--r--. 1 boinc boinc 5903 7. Feb 07:57 init_data.xml
[2020-02-07 09:26:18] drwxrwx--x. 2 boinc boinc 86 7. Feb 07:57 shared
[2020-02-07 09:26:18] -rw-r--r--. 1 boinc boinc 0 7. Feb 07:57 boinc_lockfile
[2020-02-07 09:26:18] -rw-r--r--. 1 boinc boinc 365251149 7. Feb 07:58 EVNT.14296418._001447.pool.root.1
[2020-02-07 09:26:18] -rw-r--r--. 1 boinc boinc 926 7. Feb 07:58 RTE.tar.gz
[2020-02-07 09:26:18] -rw-r--r--. 1 boinc boinc 275420 7. Feb 07:58 input.tar.gz
[2020-02-07 09:26:18] -rw-r--r--. 1 boinc boinc 8513 7. Feb 07:58 start_atlas.sh
[2020-02-07 09:26:18] -rw-r--r--. 1 boinc boinc 2958 7. Feb 07:58 pandaJob.out
[2020-02-07 09:26:18] drwxr-xr-x. 3 boinc boinc 17 7. Feb 07:58 APPS
[2020-02-07 09:26:18] -rw-------. 1 boinc boinc 3660939 7. Feb 08:00 agis_schedconf.cvmfs.json
[2020-02-07 09:26:18] -rw-------. 1 boinc boinc 7858371 7. Feb 08:00 agis_ddmendpoints.json
[2020-02-07 09:26:18] drwx------. 3 boinc boinc 229 7. Feb 08:00 pilot2
[2020-02-07 09:26:18] -rw-r--r--. 1 boinc boinc 535 7. Feb 08:59 boinc_task_state.xml
[2020-02-07 09:26:18] -rw-------. 1 boinc boinc 9055742 7. Feb 09:24 HITS.000649-1749476-22752._078090.pool.root.1
[2020-02-07 09:26:18] -rw-------. 1 boinc boinc 789 7. Feb 09:25 memory_monitor_summary.json
[2020-02-07 09:26:18] -rw-------. 1 boinc boinc 527734 7. Feb 09:25 log.000649-1749476-22752._078090.job.log.tgz.1
[2020-02-07 09:26:18] -rw-------. 1 boinc boinc 11636 7. Feb 09:25 heartbeat.json
[2020-02-07 09:26:18] -rw-r--r--. 1 boinc boinc 8192 7. Feb 09:26 boinc_mmap_file
[2020-02-07 09:26:18] -rw-r--r--. 1 boinc boinc 26 7. Feb 09:26 wrapper_checkpoint.txt
[2020-02-07 09:26:18] -rw-------. 1 boinc boinc 9322 7. Feb 09:26 pilotlog.txt
[2020-02-07 09:26:18] -rw-------. 1 boinc boinc 350925 7. Feb 09:26 log.000649-1749476-22752._078090.job.log.1
[2020-02-07 09:26:18] -rw-------. 1 boinc boinc 488 7. Feb 09:26 sABMDmNO3JwnShfckohDCDFpABFKDmABFKDmyiALDmkEFKDmb8ZBDo.diag
[2020-02-07 09:26:18] -rw-r--r--. 1 boinc boinc 7241 7. Feb 09:26 runtime_log.err
[2020-02-07 09:26:18] -rw-------. 1 boinc boinc 499 7. Feb 09:26 output.list
[2020-02-07 09:26:18] -rw-r--r--. 1 boinc boinc 742 7. Feb 09:26 runtime_log
[2020-02-07 09:26:18] -rw-------. 1 boinc boinc 901120 7. Feb 09:26 result.tar.gz
[2020-02-07 09:26:18] -rw-r--r--. 1 boinc boinc 31591 7. Feb 09:26 stderr.txt
[2020-02-07 09:26:18] HITS file was successfully produced:
[2020-02-07 09:26:18] -rw-------. 1 boinc boinc 9055742 7. Feb 09:24 shared/HITS.pool.root.1
[2020-02-07 09:26:18] *** Contents of shared directory: ***
[2020-02-07 09:26:18] insgesamt 366704
[2020-02-07 09:26:18] -rw-r--r--. 1 boinc boinc 365251149 7. Feb 07:57 ATLAS.root_0
[2020-02-07 09:26:18] -rw-r--r--. 1 boinc boinc 8513 7. Feb 07:57 start_atlas.sh
[2020-02-07 09:26:18] -rw-r--r--. 1 boinc boinc 926 7. Feb 07:57 RTE.tar.gz
[2020-02-07 09:26:18] -rw-r--r--. 1 boinc boinc 275420 7. Feb 07:57 input.tar.gz
[2020-02-07 09:26:18] -rw-------. 1 boinc boinc 9055742 7. Feb 09:24 HITS.pool.root.1
[2020-02-07 09:26:18] -rw-------. 1 boinc boinc 901120 7. Feb 09:26 result.tar.gz
09:26:20 (4378): run_atlas exited; CPU time 5514.131427
09:26:20 (4378): called boinc_finish(0)
</stderr_txt>
]]>
©2024 CERN