Name | 18iMDmoO3JwnShfckohDCDFpABFKDmABFKDmbb0VDmABFKDmcaHM6m_0 |
Workunit | 1980765 |
Created | 6 Feb 2020, 20:58:11 UTC |
Sent | 6 Feb 2020, 21:10:50 UTC |
Report deadline | 13 Feb 2020, 21:10:50 UTC |
Received | 6 Feb 2020, 22:22:28 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 3406 |
Run time | 1 hours 10 min 25 sec |
CPU time | 40 min 15 sec |
Validate state | Valid |
Credit | 63.99 |
Device peak FLOPS | 6.54 GFLOPS |
Application version | ATLAS Simulation v1.03 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.91 GB |
Peak swap size | 2.79 GB |
Peak disk usage | 722.08 MB |
<core_client_version>7.14.2</core_client_version> <![CDATA[ <stderr_txt> 22:11:53 (41537): wrapper (7.7.26015): starting 22:11:53 (41537): wrapper: running run_atlas (--nthreads 2) [2020-02-06 22:11:53] Arguments: --nthreads 2 [2020-02-06 22:11:53] Threads: 2 [2020-02-06 22:11:53] Checking for CVMFS [2020-02-06 22:11:53] Probing /cvmfs/atlas.cern.ch... OK [2020-02-06 22:11:54] Probing /cvmfs/atlas-condb.cern.ch... OK [2020-02-06 22:11:54] Probing /cvmfs/grid.cern.ch... OK [2020-02-06 22:11:55] Probing /cvmfs/cernvm-prod.cern.ch... OK [2020-02-06 22:11:55] Probing /cvmfs/sft.cern.ch... OK [2020-02-06 22:11:56] Probing /cvmfs/alice.cern.ch... OK [2020-02-06 22:11:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2020-02-06 22:11:57] 2.7.0.0 69213 20695 60296 60107 3 71 6008957 7077889 4727 65024 0 10553747 99.9594 8585145 13562 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://<local_IP_censored_by_volunteer/>:3128 1 [2020-02-06 22:11:57] CVMFS is ok [2020-02-06 22:11:57] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/images/singularity/x86_64-centos7.img [2020-02-06 22:11:57] Checking for singularity binary... [2020-02-06 22:11:57] which: no singularity in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin) [2020-02-06 22:11:57] Singularity is not installed, using version from CVMFS [2020-02-06 22:11:57] Checking singularity works with /cvmfs/atlas.cern.ch/repo/containers/sw/singularity/x86_64-el7/current/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/images/singularity/x86_64-centos7.img hostname [2020-02-06 22:12:08] [34mINFO: [0m Convert SIF file to sandbox... black [34mINFO: [0m Cleaning up image... [2020-02-06 22:12:08] Singularity works [2020-02-06 22:12:08] Set ATHENA_PROC_NUMBER=2 [2020-02-06 22:12:08] Starting ATLAS job with PandaID=4002876565 [2020-02-06 22:12:08] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/singularity/x86_64-el7/current/bin/singularity exec --pwd /home/boinc9/BOINC_TEST/slots/0 -B /cvmfs,/home /cvmfs/atlas.cern.ch/repo/containers/images/singularity/x86_64-centos7.img sh start_atlas.sh [2020-02-06 23:22:15] *** The last 200 lines of the pilot log: *** [2020-02-06 23:22:15] "cpuTime": 5, [2020-02-06 23:22:15] "wallTime": 1 [2020-02-06 23:22:15] }, [2020-02-06 23:22:15] "preExe": { [2020-02-06 23:22:15] "cpuTime": 17, [2020-02-06 23:22:15] "wallTime": 26 [2020-02-06 23:22:15] }, [2020-02-06 23:22:15] "total": { [2020-02-06 23:22:15] "cpuTime": 103, [2020-02-06 23:22:15] "wallTime": 1118 [2020-02-06 23:22:15] }, [2020-02-06 23:22:15] "validation": { [2020-02-06 23:22:15] "cpuTime": 0, [2020-02-06 23:22:15] "wallTime": 0 [2020-02-06 23:22:15] }, [2020-02-06 23:22:15] "wallTime": 1091 [2020-02-06 23:22:15] } [2020-02-06 23:22:15] }, [2020-02-06 23:22:15] "machine": { [2020-02-06 23:22:15] "cpu_family": "23", [2020-02-06 23:22:15] "linux_distribution": [ [2020-02-06 23:22:15] "CentOS Linux", [2020-02-06 23:22:15] "7.6.1810", [2020-02-06 23:22:15] "Core" [2020-02-06 23:22:15] ], [2020-02-06 23:22:15] "model": "1", [2020-02-06 23:22:15] "model_name": "AMD Ryzen Threadripper 1950X 16-Core Processor", [2020-02-06 23:22:15] "node": "black", [2020-02-06 23:22:15] "platform": "Linux-4.12.14-lp151.28.36-default-x86_64-with-centos-7.6.1810-Core" [2020-02-06 23:22:15] }, [2020-02-06 23:22:15] "transform": { [2020-02-06 23:22:15] "cpuEfficiency": 0.334, [2020-02-06 23:22:15] "cpuPWEfficiency": 0.3466, [2020-02-06 23:22:15] "cpuTime": 7, [2020-02-06 23:22:15] "cpuTimeTotal": 2447, [2020-02-06 23:22:15] "externalCpuTime": 23, [2020-02-06 23:22:15] "processedEvents": 10, [2020-02-06 23:22:15] "trfPredata": null, [2020-02-06 23:22:15] "wallTime": 3485 [2020-02-06 23:22:15] } [2020-02-06 23:22:15] } [2020-02-06 23:22:15] } [2020-02-06 23:22:15] 2020-02-06 22:21:15,183 | DEBUG | queue_monitor | pilot.util.auxiliary.4002876565 | update_server | xml:will send fileinfo [2020-02-06 23:22:15] 2020-02-06 22:21:15,183 | DEBUG | queue_monitor | pilot.control.job | get_proper_state | state=finished [2020-02-06 23:22:15] 2020-02-06 22:21:15,183 | DEBUG | queue_monitor | pilot.control.job | get_proper_state | serverstate=running [2020-02-06 23:22:15] 2020-02-06 22:21:15,183 | DEBUG | queue_monitor | pilot.control.job | get_proper_state | serverstate=finished [2020-02-06 23:22:15] 2020-02-06 22:21:15,183 | INFO | queue_monitor | pilot.control.job.4002876565 | send_state | pilot will not update the server (heartbeat message will be written to file) [2020-02-06 23:22:15] 2020-02-06 22:21:15,183 | INFO | queue_monitor | pilot.control.job.4002876565 | send_state | job 4002876565 has finished - writing final server update [2020-02-06 23:22:15] 2020-02-06 22:21:15,183 | DEBUG | queue_monitor | pilot.control.job.4002876565 | get_data_structure | building data structure to be sent to server with heartbeat [2020-02-06 23:22:15] 2020-02-06 22:21:15,184 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | get_job_metrics | will not add max space = -352983629 B to job metrics [2020-02-06 23:22:15] 2020-02-06 22:21:15,185 | DEBUG | queue_monitor | pilot.api.analytics | get_fitted_data | removing tails from data to be fitted [2020-02-06 23:22:15] 2020-02-06 22:21:15,185 | INFO | queue_monitor | pilot.api.analytics | get_fitted_data | fitting pss+swap vs Time [2020-02-06 23:22:15] 2020-02-06 22:21:15,186 | INFO | queue_monitor | pilot.api.analytics | get_fitted_data | current memory leak: -276.60 B/s (using 52 data points, chi2=33273117) [2020-02-06 23:22:15] 2020-02-06 22:21:15,186 | DEBUG | queue_monitor | pilot.util.auxiliary.4002876565 | get_job_metrics | job metrics="coreCount=2 actualCoreCount=3 nEvents=10 leak=-276.60 chi2=33273117" [2020-02-06 23:22:15] 2020-02-06 22:21:15,186 | INFO | queue_monitor | pilot.control.job.4002876565 | get_data_structure | total number of processed events: 10 (read) [2020-02-06 23:22:15] 2020-02-06 22:21:15,188 | INFO | queue_monitor | pilot.user.atlas.utilities | get_memory_values | using path: /home/boinc9/BOINC_TEST/slots/0/PanDA_Pilot-4002876565/memory_monitor_summary.json (trf name=prmon) [2020-02-06 23:22:15] 2020-02-06 22:21:15,190 | DEBUG | queue_monitor | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'Max': {'rx_packets': 724219, 'nprocs': 10, 'nthreads': 1, 'rx_bytes': 2735835765, 'wtime': 3816, 'rss': 5947572, 'write_bytes': 0, 'vmem': 8680016, 'read_bytes': 0, 'stime': 45, 'tx_bytes': 5543539986, 'pss': 2352822, 'wchar': 0, 'rchar': 0, 'tx_packets': 2448328, 'swap': 0, 'utime': 2339}, 'Avg': {'write_bytes': 0, 'nprocs': 6, 'nthreads': 0, 'rx_bytes': 716908, 'rx_packets': 189, 'vmem': 4116495, 'read_bytes': 0, 'swap': 0, 'tx_bytes': 1452648, 'pss': 1118750, 'wchar': 0, 'rchar': 0, 'tx_packets': 641, 'rss': 2381103}} [2020-02-06 23:22:15] 2020-02-06 22:21:15,190 | INFO | queue_monitor | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard info from prmon json [2020-02-06 23:22:15] 2020-02-06 22:21:15,190 | INFO | queue_monitor | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard memory fields from prmon json [2020-02-06 23:22:15] 2020-02-06 22:21:15,190 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | .............................. [2020-02-06 23:22:15] 2020-02-06 22:21:15,190 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . Timing measurements: [2020-02-06 23:22:15] 2020-02-06 22:21:15,190 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . get job = 0 s [2020-02-06 23:22:15] 2020-02-06 22:21:15,190 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . initial setup = 4 s [2020-02-06 23:22:15] 2020-02-06 22:21:15,190 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . payload setup = 0 s [2020-02-06 23:22:15] 2020-02-06 22:21:15,190 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . total setup = 4 s [2020-02-06 23:22:15] 2020-02-06 22:21:15,190 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . stage-in = 0 s [2020-02-06 23:22:15] 2020-02-06 22:21:15,191 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . payload execution = 4044 s [2020-02-06 23:22:15] 2020-02-06 22:21:15,191 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . stage-out = 5 s [2020-02-06 23:22:15] 2020-02-06 22:21:15,191 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | .............................. [2020-02-06 23:22:15] 2020-02-06 22:21:15,191 | DEBUG | queue_monitor | pilot.control.job.4002876565 | send_state | wrote heartbeat to file /home/boinc9/BOINC_TEST/slots/0/heartbeat.json [2020-02-06 23:22:15] 2020-02-06 22:21:15,191 | DEBUG | queue_monitor | pilot.control.job | queue_monitor | job 4002876565 was dequeued from the monitored payloads queue [2020-02-06 23:22:15] 2020-02-06 22:21:15,192 | DEBUG | queue_monitor | pilot.control.job | queue_monitor | tmp job object deleted [2020-02-06 23:22:15] 2020-02-06 22:21:15,192 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | [2020-02-06 23:22:15] 2020-02-06 22:21:15,192 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | job summary report [2020-02-06 23:22:15] 2020-02-06 22:21:15,192 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | -------------------------------------------------- [2020-02-06 23:22:15] 2020-02-06 22:21:15,192 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | PanDA job id: 4002876565 [2020-02-06 23:22:15] 2020-02-06 22:21:15,192 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | task id: 000649-1749828-22167 [2020-02-06 23:22:15] 2020-02-06 22:21:15,192 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | errors: (none) [2020-02-06 23:22:15] 2020-02-06 22:21:15,192 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | status: LOG_TRANSFER = DONE [2020-02-06 23:22:15] 2020-02-06 22:21:15,192 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | pilot state: finished [2020-02-06 23:22:15] 2020-02-06 22:21:15,193 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | transexitcode: 0 [2020-02-06 23:22:15] 2020-02-06 22:21:15,193 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | exeerrorcode: 0 [2020-02-06 23:22:15] 2020-02-06 22:21:15,193 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | exeerrordiag: [2020-02-06 23:22:15] 2020-02-06 22:21:15,193 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | exitcode: 0 [2020-02-06 23:22:15] 2020-02-06 22:21:15,193 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | exitmsg: OK [2020-02-06 23:22:15] 2020-02-06 22:21:15,193 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | cpuconsumptiontime: 2435 s [2020-02-06 23:22:15] 2020-02-06 22:21:15,193 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | nevents: 10 [2020-02-06 23:22:15] 2020-02-06 22:21:15,193 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | neventsw: 0 [2020-02-06 23:22:15] 2020-02-06 22:21:15,193 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | pid: 77762 [2020-02-06 23:22:15] 2020-02-06 22:21:15,193 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | pgrp: 77762 [2020-02-06 23:22:15] 2020-02-06 22:21:15,193 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | corecount: 2 [2020-02-06 23:22:15] 2020-02-06 22:21:15,193 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | event service: False [2020-02-06 23:22:15] 2020-02-06 22:21:15,193 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | -------------------------------------------------- [2020-02-06 23:22:15] 2020-02-06 22:21:15,194 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | [2020-02-06 23:22:15] 2020-02-06 22:21:15,194 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue jobs has 0 job(s) [2020-02-06 23:22:15] 2020-02-06 22:21:15,194 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue payloads has 0 job(s) [2020-02-06 23:22:15] 2020-02-06 22:21:15,194 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue data_in has 0 job(s) [2020-02-06 23:22:15] 2020-02-06 22:21:15,194 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue data_out has 0 job(s) [2020-02-06 23:22:15] 2020-02-06 22:21:15,194 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue current_data_in has 0 job(s) [2020-02-06 23:22:15] 2020-02-06 22:21:15,194 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue validated_jobs has 0 job(s) [2020-02-06 23:22:15] 2020-02-06 22:21:15,194 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue validated_payloads has 0 job(s) [2020-02-06 23:22:15] 2020-02-06 22:21:15,194 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue monitored_payloads has 0 job(s) [2020-02-06 23:22:15] 2020-02-06 22:21:15,195 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue finished_jobs has 0 job(s) [2020-02-06 23:22:15] 2020-02-06 22:21:15,195 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue finished_payloads has 0 job(s) [2020-02-06 23:22:15] 2020-02-06 22:21:15,195 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue finished_data_in has 1 job(s) [2020-02-06 23:22:15] 2020-02-06 22:21:15,195 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue finished_data_out has 0 job(s) [2020-02-06 23:22:15] 2020-02-06 22:21:15,195 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue failed_jobs has 0 job(s) [2020-02-06 23:22:15] 2020-02-06 22:21:15,195 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue failed_payloads has 0 job(s) [2020-02-06 23:22:15] 2020-02-06 22:21:15,195 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue failed_data_in has 0 job(s) [2020-02-06 23:22:15] 2020-02-06 22:21:15,195 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue failed_data_out has 0 job(s) [2020-02-06 23:22:15] 2020-02-06 22:21:15,195 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue completed_jobs has 0 job(s) [2020-02-06 23:22:15] 2020-02-06 22:21:15,195 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s) [2020-02-06 23:22:15] 2020-02-06 22:21:15,195 | INFO | retrieve | pilot.control.job.4002876565 | has_job_completed | job 4002876565 has completed (purged errors) [2020-02-06 23:22:15] 2020-02-06 22:21:15,196 | INFO | retrieve | pilot.util.processes | cleanup | overall cleanup function is called [2020-02-06 23:22:15] 2020-02-06 22:21:15,197 | DEBUG | retrieve | pilot.util.processes | cleanup | work directory was removed: /home/boinc9/BOINC_TEST/slots/0/PanDA_Pilot-4002876565 [2020-02-06 23:22:15] 2020-02-06 22:21:16,200 | INFO | retrieve | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [77762] [2020-02-06 23:22:15] 2020-02-06 22:21:16,200 | INFO | retrieve | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 77762 [2020-02-06 23:22:15] 2020-02-06 22:21:16,200 | INFO | retrieve | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes [2020-02-06 23:22:15] 2020-02-06 22:21:17,208 | INFO | retrieve | pilot.util.processes | cleanup | collected zombie processes [2020-02-06 23:22:15] 2020-02-06 22:21:17,208 | INFO | retrieve | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=77762 [2020-02-06 23:22:15] 2020-02-06 22:21:17,956 | INFO | retrieve | pilot.util.processes | kill_processes | process IDs to be killed: [77762] (in reverse order) [2020-02-06 23:22:15] 2020-02-06 22:21:18,641 | WARNING | retrieve | pilot.util.processes | kill_processes | found no corresponding commands to process id(s) [2020-02-06 23:22:15] 2020-02-06 22:21:18,641 | INFO | retrieve | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs [2020-02-06 23:22:15] 2020-02-06 22:21:18,642 | INFO | retrieve | pilot.control.job | retrieve | ready for new job [2020-02-06 23:22:15] 2020-02-06 22:21:18,642 | INFO | retrieve | root | retrieve | pilot has finished for previous job - re-establishing logging [2020-02-06 23:22:15] mpi4py not found [2020-02-06 23:22:15] 2020-02-06 22:21:18,842 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner | **************************************** [2020-02-06 23:22:15] 2020-02-06 22:21:18,843 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 2.3.4 (12) *** [2020-02-06 23:22:15] 2020-02-06 22:21:18,843 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner | **************************************** [2020-02-06 23:22:15] 2020-02-06 22:21:18,843 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner | [2020-02-06 23:22:15] 2020-02-06 22:21:18,845 | INFO | retrieve | pilot.util.auxiliary | display_architecture_info | architecture information: [2020-02-06 23:22:15] 2020-02-06 22:21:20,912 | INFO | retrieve | pilot.util.auxiliary | display_architecture_info | [2020-02-06 23:22:15] LSB Version: :core-4.1-amd64:core-4.1-noarch [2020-02-06 23:22:15] Distributor ID: CentOS [2020-02-06 23:22:15] Description: CentOS Linux release 7.6.1810 (Core) [2020-02-06 23:22:15] Release: 7.6.1810 [2020-02-06 23:22:15] Codename: Core [2020-02-06 23:22:15] 2020-02-06 22:21:20,912 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner | **************************************** [2020-02-06 23:22:15] 2020-02-06 22:21:21,415 | DEBUG | retrieve | pilot.util.monitoring | check_local_space | checking local space on /home/boinc9/BOINC_TEST/slots/0 [2020-02-06 23:22:15] 2020-02-06 22:21:21,726 | INFO | retrieve | pilot.util.monitoring | check_local_space | sufficient remaining disk space (102324240384 B) [2020-02-06 23:22:15] 2020-02-06 22:21:21,726 | WARNING | retrieve | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job [2020-02-06 23:22:15] 2020-02-06 22:21:21,726 | DEBUG | retrieve | pilot.control.job | retrieve | [job] retrieve thread has finished [2020-02-06 23:22:15] 2020-02-06 22:21:21,738 | WARNING | queue_monitoring | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration [2020-02-06 23:22:15] 2020-02-06 22:21:21,760 | WARNING | monitor | pilot.control.monitor | control | aborting monitor loop since graceful_stop has been set [2020-02-06 23:22:15] 2020-02-06 22:21:21,760 | INFO | monitor | pilot.control.monitor | control | [monitor] control thread has ended [2020-02-06 23:22:15] 2020-02-06 22:21:21,876 | WARNING | copytool_out | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration [2020-02-06 23:22:15] 2020-02-06 22:21:21,880 | DEBUG | validate | pilot.control.job | validate | [job] validate thread has finished [2020-02-06 23:22:15] 2020-02-06 22:21:22,212 | DEBUG | payload | pilot.control.payload | control | payload control ending since graceful_stop has been set [2020-02-06 23:22:15] 2020-02-06 22:21:22,212 | DEBUG | payload | pilot.control.payload | control | [payload] control thread has finished [2020-02-06 23:22:15] 2020-02-06 22:21:22,216 | DEBUG | data | pilot.control.data | control | data control ending since graceful_stop has been set [2020-02-06 23:22:15] 2020-02-06 22:21:22,216 | DEBUG | data | pilot.control.data | control | [data] control thread has finished [2020-02-06 23:22:15] 2020-02-06 22:21:22,240 | DEBUG | MainThread | pilot.workflow.generic | run | thread count now at 12 threads [2020-02-06 23:22:15] 2020-02-06 22:21:22,240 | DEBUG | MainThread | pilot.workflow.generic | run | enumerate: [<_MainThread(MainThread, started 139889441265472)>, <ExcThread(job, started 139889278584576)>, <ExcThread(queue_monitoring, started 139889022592768)>, <ExcThread(validate_pre, started 139889005807360)>, <ExcThread(queue_monitor, started 139888552830720)>, <ExcThread(failed_post, started 139888544438016)>, <ExcThread(create_data_payload, started 139889030985472)>, <ExcThread(copytool_in, started 139888980629248)>, <ExcThread(execute_payloads, started 139888536045312)>, <ExcThread(job_monitor, started 139888989021952)>, <ExcThread(validate_post, started 139888561223424)>, <ExcThread(copytool_out, started 139889253406464)>] [2020-02-06 23:22:15] 2020-02-06 22:21:22,252 | DEBUG | create_data_payload | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished [2020-02-06 23:22:15] 2020-02-06 22:21:22,324 | INFO | validate_post | pilot.control.payload | validate_post | [payload] validate_post thread has finished [2020-02-06 23:22:15] 2020-02-06 22:21:22,636 | DEBUG | job | pilot.control.job | control | job control ending since graceful_stop has been set [2020-02-06 23:22:15] 2020-02-06 22:21:22,636 | DEBUG | job | pilot.control.job | control | [job] control thread has finished [2020-02-06 23:22:15] 2020-02-06 22:21:22,859 | INFO | execute_payloads | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished [2020-02-06 23:22:15] 2020-02-06 22:21:22,873 | INFO | validate_pre | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished [2020-02-06 23:22:15] 2020-02-06 22:21:22,877 | DEBUG | copytool_in | pilot.control.data | copytool_in | [data] copytool_in thread has finished [2020-02-06 23:22:15] 2020-02-06 22:21:22,879 | DEBUG | copytool_out | pilot.control.data | copytool_out | [data] copytool_out thread has finished [2020-02-06 23:22:15] 2020-02-06 22:21:22,928 | INFO | failed_post | pilot.control.payload | failed_post | [payload] failed_post thread has finished [2020-02-06 23:22:15] 2020-02-06 22:21:23,248 | DEBUG | MainThread | pilot.workflow.generic | run | thread count now at 4 threads [2020-02-06 23:22:15] 2020-02-06 22:21:23,248 | DEBUG | MainThread | pilot.workflow.generic | run | enumerate: [<_MainThread(MainThread, started 139889441265472)>, <ExcThread(queue_monitoring, started 139889022592768)>, <ExcThread(queue_monitor, started 139888552830720)>, <ExcThread(job_monitor, started 139888989021952)>] [2020-02-06 23:22:15] 2020-02-06 22:21:24,232 | WARNING | queue_monitor | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration [2020-02-06 23:22:15] 2020-02-06 22:21:24,232 | DEBUG | queue_monitor | pilot.control.job | queue_monitor | [job] queue monitor thread has finished [2020-02-06 23:22:15] 2020-02-06 22:21:24,253 | DEBUG | MainThread | pilot.workflow.generic | run | thread count now at 3 threads [2020-02-06 23:22:15] 2020-02-06 22:21:24,253 | DEBUG | MainThread | pilot.workflow.generic | run | enumerate: [<_MainThread(MainThread, started 139889441265472)>, <ExcThread(queue_monitoring, started 139889022592768)>, <ExcThread(job_monitor, started 139888989021952)>] [2020-02-06 23:22:15] 2020-02-06 22:21:24,752 | DEBUG | queue_monitoring | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished [2020-02-06 23:22:15] 2020-02-06 22:21:25,258 | DEBUG | MainThread | pilot.workflow.generic | run | thread count now at 2 threads [2020-02-06 23:22:15] 2020-02-06 22:21:25,259 | DEBUG | MainThread | pilot.workflow.generic | run | enumerate: [<_MainThread(MainThread, started 139889441265472)>, <ExcThread(job_monitor, started 139888989021952)>] [2020-02-06 23:22:15] 2020-02-06 22:22:12,199 | WARNING | job_monitor | pilot.control.job | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 63 s) [2020-02-06 23:22:15] 2020-02-06 22:22:12,199 | DEBUG | job_monitor | pilot.control.job | job_monitor | [job] job monitor thread has finished [2020-02-06 23:22:15] 2020-02-06 22:22:12,560 | INFO | MainThread | pilot.workflow.generic | run | end of generic workflow (traces error code: 0) [2020-02-06 23:22:15] 2020-02-06 22:22:12,560 | INFO | MainThread | root | wrap_up | traces error code: 0 [2020-02-06 23:22:15] 2020-02-06 22:22:12,560 | INFO | MainThread | root | wrap_up | pilot has finished [2020-02-06 23:22:15] 2020-02-06 22:22:12 UTC [wrapper] ==== pilot stdout END ==== [2020-02-06 23:22:15] 2020-02-06 22:22:12 UTC [wrapper] ==== wrapper stdout RESUME ==== [2020-02-06 23:22:15] 2020-02-06 22:22:12 UTC [wrapper] Pilot exit status: 0 [2020-02-06 23:22:15] 2020-02-06 22:22:13 UTC [wrapper] STATUSCODE: 0 [2020-02-06 23:22:15] 2020-02-06 22:22:13 UTC [wrapper] apfmon messages muted [2020-02-06 23:22:15] ---- find pandaID.out ---- [2020-02-06 23:22:15] total 60 [2020-02-06 23:22:15] -rw------- 1 boinc9 boinc 11357 Jul 25 2019 LICENSE [2020-02-06 23:22:15] -rw------- 1 boinc9 boinc 20 Sep 9 13:04 MANIFEST.IN [2020-02-06 23:22:15] -rw------- 1 boinc9 boinc 8 Dec 12 19:00 PILOTVERSION [2020-02-06 23:22:15] -rw------- 1 boinc9 boinc 2212 Nov 14 11:01 README.md [2020-02-06 23:22:15] -rw------- 1 boinc9 boinc 221 Jul 25 2019 TODO.md [2020-02-06 23:22:15] -rw------- 1 boinc9 boinc 11 Feb 6 22:13 pandaIDs.out [2020-02-06 23:22:15] drwx------ 14 boinc9 boinc 320 Feb 6 22:13 pilot [2020-02-06 23:22:15] -rwx------ 1 boinc9 boinc 21225 Dec 12 19:00 pilot.py [2020-02-06 23:22:15] -rw------- 1 boinc9 boinc 766 Oct 10 16:01 setup.py [2020-02-06 23:22:15] -rw------- 1 boinc9 boinc 11 Feb 6 22:13 /home/boinc9/BOINC_TEST/slots/0/pilot2/pandaIDs.out [2020-02-06 23:22:15] 4002876565 [2020-02-06 23:22:15] [2020-02-06 23:22:15] 2020-02-06 22:22:13 UTC [wrapper] Test setup, not cleaning [2020-02-06 23:22:15] 2020-02-06 22:22:13 UTC [wrapper] ==== wrapper stdout END ==== [2020-02-06 23:22:15] 2020-02-06 22:22:13 UTC [wrapper] ==== wrapper stderr END ==== [2020-02-06 23:22:15] 2020-02-06 22:22:13 UTC [wrapper] wrapper wrapperexiting ec=0, duration=4195 [2020-02-06 23:22:15] 2020-02-06 22:22:13 UTC [wrapper] apfmon messages muted [2020-02-06 23:22:15] *** Error codes and diagnostics *** [2020-02-06 23:22:15] "exeErrorCode": 0, [2020-02-06 23:22:15] "exeErrorDiag": "", [2020-02-06 23:22:15] "pilotErrorCode": 0, [2020-02-06 23:22:15] "pilotErrorDiag": "", [2020-02-06 23:22:15] *** Listing of results directory *** [2020-02-06 23:22:15] total 379320 [2020-02-06 23:22:15] -rw-r--r-- 1 boinc9 boinc 267260 Feb 6 21:30 pilot2.tar.gz [2020-02-06 23:22:15] -rw-r--r-- 1 boinc9 boinc 4492 Feb 6 21:55 queuedata.json [2020-02-06 23:22:15] -rwx------ 1 boinc9 boinc 12641 Feb 6 21:58 runpilot2-wrapper.sh [2020-02-06 23:22:15] -rw-r--r-- 1 boinc9 boinc 107 Feb 6 22:11 wrapper_26015_x86_64-pc-linux-gnu [2020-02-06 23:22:15] -rwxr-xr-x 1 boinc9 boinc 5573 Feb 6 22:11 run_atlas [2020-02-06 23:22:15] -rw-r--r-- 1 boinc9 boinc 112 Feb 6 22:11 job.xml [2020-02-06 23:22:15] drwxrwx--x 2 boinc9 boinc 120 Feb 6 22:11 shared [2020-02-06 23:22:15] -rw-r--r-- 1 boinc9 boinc 6359 Feb 6 22:11 init_data.xml [2020-02-06 23:22:15] -rw-r--r-- 1 boinc9 boinc 8192 Feb 6 22:11 boinc_mmap_file [2020-02-06 23:22:15] -rw-r--r-- 1 boinc9 boinc 0 Feb 6 22:11 boinc_lockfile [2020-02-06 23:22:15] -rw-r--r-- 1 boinc9 boinc 8553 Feb 6 22:12 start_atlas.sh [2020-02-06 23:22:15] -rw-r--r-- 1 boinc9 boinc 275414 Feb 6 22:12 input.tar.gz [2020-02-06 23:22:15] -rw-r--r-- 1 boinc9 boinc 926 Feb 6 22:12 RTE.tar.gz [2020-02-06 23:22:15] -rw-r--r-- 1 boinc9 boinc 365251149 Feb 6 22:12 EVNT.14296418._001447.pool.root.1 [2020-02-06 23:22:15] -rw-r--r-- 1 boinc9 boinc 2958 Feb 6 22:12 pandaJob.out [2020-02-06 23:22:15] drwxr-xr-x 3 boinc9 boinc 60 Feb 6 22:12 APPS [2020-02-06 23:22:15] -rw------- 1 boinc9 boinc 3660951 Feb 6 22:13 agis_schedconf.cvmfs.json [2020-02-06 23:22:15] -rw------- 1 boinc9 boinc 7858371 Feb 6 22:13 agis_ddmendpoints.json [2020-02-06 23:22:15] drwx------ 3 boinc9 boinc 300 Feb 6 22:13 pilot2 [2020-02-06 23:22:15] -rw------- 1 boinc9 boinc 9269437 Feb 6 23:19 HITS.000649-1749828-22167._078090.pool.root.1 [2020-02-06 23:22:15] -rw------- 1 boinc9 boinc 799 Feb 6 23:21 memory_monitor_summary.json [2020-02-06 23:22:15] -rw------- 1 boinc9 boinc 516229 Feb 6 23:21 log.000649-1749828-22167._078090.job.log.tgz.1 [2020-02-06 23:22:15] -rw------- 1 boinc9 boinc 13738 Feb 6 23:21 heartbeat.json [2020-02-06 23:22:15] -rw------- 1 boinc9 boinc 8486 Feb 6 23:22 pilotlog.txt [2020-02-06 23:22:15] -rw------- 1 boinc9 boinc 300992 Feb 6 23:22 log.000649-1749828-22167._078090.job.log.1 [2020-02-06 23:22:15] -rw------- 1 boinc9 boinc 494 Feb 6 23:22 18iMDmoO3JwnShfckohDCDFpABFKDmABFKDmbb0VDmABFKDmcaHM6m.diag [2020-02-06 23:22:15] -rw------- 1 boinc9 boinc 499 Feb 6 23:22 output.list [2020-02-06 23:22:15] -rw-r--r-- 1 boinc9 boinc 742 Feb 6 23:22 runtime_log [2020-02-06 23:22:15] -rw------- 1 boinc9 boinc 839680 Feb 6 23:22 result.tar.gz [2020-02-06 23:22:15] -rw-r--r-- 1 boinc9 boinc 7704 Feb 6 23:22 runtime_log.err [2020-02-06 23:22:15] -rw-r--r-- 1 boinc9 boinc 31131 Feb 6 23:22 stderr.txt [2020-02-06 23:22:16] HITS file was successfully produced: [2020-02-06 23:22:16] -rw------- 1 boinc9 boinc 9269437 Feb 6 23:19 shared/HITS.pool.root.1 [2020-02-06 23:22:16] *** Contents of shared directory: *** [2020-02-06 23:22:16] total 366856 [2020-02-06 23:22:16] -rw-r--r-- 1 boinc9 boinc 8553 Feb 6 22:11 start_atlas.sh [2020-02-06 23:22:16] -rw-r--r-- 1 boinc9 boinc 275414 Feb 6 22:11 input.tar.gz [2020-02-06 23:22:16] -rw-r--r-- 1 boinc9 boinc 926 Feb 6 22:11 RTE.tar.gz [2020-02-06 23:22:16] -rw-r--r-- 1 boinc9 boinc 365251149 Feb 6 22:11 ATLAS.root_0 [2020-02-06 23:22:16] -rw------- 1 boinc9 boinc 9269437 Feb 6 23:19 HITS.pool.root.1 [2020-02-06 23:22:16] -rw------- 1 boinc9 boinc 839680 Feb 6 23:22 result.tar.gz 23:22:17 (41537): run_atlas exited; CPU time 2415.082573 23:22:17 (41537): called boinc_finish(0) </stderr_txt> ]]>
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