Name 18iMDmoO3JwnShfckohDCDFpABFKDmABFKDmbb0VDmABFKDmcaHM6m_0
Workunit 1980765
Created 6 Feb 2020, 20:58:11 UTC
Sent 6 Feb 2020, 21:10:50 UTC
Report deadline 13 Feb 2020, 21:10:50 UTC
Received 6 Feb 2020, 22:22:28 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 3406
Run time 1 hours 10 min 25 sec
CPU time 40 min 15 sec
Validate state Valid
Credit 63.99
Device peak FLOPS 6.54 GFLOPS
Application version ATLAS Simulation v1.03 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 1.91 GB
Peak swap size 2.79 GB
Peak disk usage 722.08 MB

Stderr output

<core_client_version>7.14.2</core_client_version>
<![CDATA[
<stderr_txt>
22:11:53 (41537): wrapper (7.7.26015): starting
22:11:53 (41537): wrapper: running run_atlas (--nthreads 2)
[2020-02-06 22:11:53] Arguments: --nthreads 2
[2020-02-06 22:11:53] Threads: 2
[2020-02-06 22:11:53] Checking for CVMFS
[2020-02-06 22:11:53] Probing /cvmfs/atlas.cern.ch... OK
[2020-02-06 22:11:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2020-02-06 22:11:54] Probing /cvmfs/grid.cern.ch... OK
[2020-02-06 22:11:55] Probing /cvmfs/cernvm-prod.cern.ch... OK
[2020-02-06 22:11:55] Probing /cvmfs/sft.cern.ch... OK
[2020-02-06 22:11:56] Probing /cvmfs/alice.cern.ch... OK
[2020-02-06 22:11:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2020-02-06 22:11:57] 2.7.0.0 69213 20695 60296 60107 3 71 6008957 7077889 4727 65024 0 10553747 99.9594 8585145 13562 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://<local_IP_censored_by_volunteer/>:3128 1
[2020-02-06 22:11:57] CVMFS is ok
[2020-02-06 22:11:57] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/images/singularity/x86_64-centos7.img
[2020-02-06 22:11:57] Checking for singularity binary...
[2020-02-06 22:11:57] which: no singularity in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin)
[2020-02-06 22:11:57] Singularity is not installed, using version from CVMFS
[2020-02-06 22:11:57] Checking singularity works with /cvmfs/atlas.cern.ch/repo/containers/sw/singularity/x86_64-el7/current/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/images/singularity/x86_64-centos7.img hostname
[2020-02-06 22:12:08] INFO:  Convert SIF file to sandbox... black INFO:  Cleaning up image...
[2020-02-06 22:12:08] Singularity works
[2020-02-06 22:12:08] Set ATHENA_PROC_NUMBER=2
[2020-02-06 22:12:08] Starting ATLAS job with PandaID=4002876565
[2020-02-06 22:12:08] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/singularity/x86_64-el7/current/bin/singularity exec --pwd /home/boinc9/BOINC_TEST/slots/0 -B /cvmfs,/home /cvmfs/atlas.cern.ch/repo/containers/images/singularity/x86_64-centos7.img sh start_atlas.sh
[2020-02-06 23:22:15]  *** The last 200 lines of the pilot log: ***
[2020-02-06 23:22:15]           "cpuTime": 5, 
[2020-02-06 23:22:15]           "wallTime": 1
[2020-02-06 23:22:15]         }, 
[2020-02-06 23:22:15]         "preExe": {
[2020-02-06 23:22:15]           "cpuTime": 17, 
[2020-02-06 23:22:15]           "wallTime": 26
[2020-02-06 23:22:15]         }, 
[2020-02-06 23:22:15]         "total": {
[2020-02-06 23:22:15]           "cpuTime": 103, 
[2020-02-06 23:22:15]           "wallTime": 1118
[2020-02-06 23:22:15]         }, 
[2020-02-06 23:22:15]         "validation": {
[2020-02-06 23:22:15]           "cpuTime": 0, 
[2020-02-06 23:22:15]           "wallTime": 0
[2020-02-06 23:22:15]         }, 
[2020-02-06 23:22:15]         "wallTime": 1091
[2020-02-06 23:22:15]       }
[2020-02-06 23:22:15]     }, 
[2020-02-06 23:22:15]     "machine": {
[2020-02-06 23:22:15]       "cpu_family": "23", 
[2020-02-06 23:22:15]       "linux_distribution": [
[2020-02-06 23:22:15]         "CentOS Linux", 
[2020-02-06 23:22:15]         "7.6.1810", 
[2020-02-06 23:22:15]         "Core"
[2020-02-06 23:22:15]       ], 
[2020-02-06 23:22:15]       "model": "1", 
[2020-02-06 23:22:15]       "model_name": "AMD Ryzen Threadripper 1950X 16-Core Processor", 
[2020-02-06 23:22:15]       "node": "black", 
[2020-02-06 23:22:15]       "platform": "Linux-4.12.14-lp151.28.36-default-x86_64-with-centos-7.6.1810-Core"
[2020-02-06 23:22:15]     }, 
[2020-02-06 23:22:15]     "transform": {
[2020-02-06 23:22:15]       "cpuEfficiency": 0.334, 
[2020-02-06 23:22:15]       "cpuPWEfficiency": 0.3466, 
[2020-02-06 23:22:15]       "cpuTime": 7, 
[2020-02-06 23:22:15]       "cpuTimeTotal": 2447, 
[2020-02-06 23:22:15]       "externalCpuTime": 23, 
[2020-02-06 23:22:15]       "processedEvents": 10, 
[2020-02-06 23:22:15]       "trfPredata": null, 
[2020-02-06 23:22:15]       "wallTime": 3485
[2020-02-06 23:22:15]     }
[2020-02-06 23:22:15]   }
[2020-02-06 23:22:15] }
[2020-02-06 23:22:15] 2020-02-06 22:21:15,183 | DEBUG    | queue_monitor       | pilot.util.auxiliary.4002876565  | update_server             | xml:will send fileinfo
[2020-02-06 23:22:15] 2020-02-06 22:21:15,183 | DEBUG    | queue_monitor       | pilot.control.job                | get_proper_state          | state=finished
[2020-02-06 23:22:15] 2020-02-06 22:21:15,183 | DEBUG    | queue_monitor       | pilot.control.job                | get_proper_state          | serverstate=running
[2020-02-06 23:22:15] 2020-02-06 22:21:15,183 | DEBUG    | queue_monitor       | pilot.control.job                | get_proper_state          | serverstate=finished
[2020-02-06 23:22:15] 2020-02-06 22:21:15,183 | INFO     | queue_monitor       | pilot.control.job.4002876565     | send_state                | pilot will not update the server (heartbeat message will be written to file)
[2020-02-06 23:22:15] 2020-02-06 22:21:15,183 | INFO     | queue_monitor       | pilot.control.job.4002876565     | send_state                | job 4002876565 has finished - writing final server update
[2020-02-06 23:22:15] 2020-02-06 22:21:15,183 | DEBUG    | queue_monitor       | pilot.control.job.4002876565     | get_data_structure        | building data structure to be sent to server with heartbeat
[2020-02-06 23:22:15] 2020-02-06 22:21:15,184 | INFO     | queue_monitor       | pilot.util.auxiliary.4002876565  | get_job_metrics           | will not add max space = -352983629 B to job metrics
[2020-02-06 23:22:15] 2020-02-06 22:21:15,185 | DEBUG    | queue_monitor       | pilot.api.analytics              | get_fitted_data           | removing tails from data to be fitted
[2020-02-06 23:22:15] 2020-02-06 22:21:15,185 | INFO     | queue_monitor       | pilot.api.analytics              | get_fitted_data           | fitting pss+swap vs Time
[2020-02-06 23:22:15] 2020-02-06 22:21:15,186 | INFO     | queue_monitor       | pilot.api.analytics              | get_fitted_data           | current memory leak: -276.60 B/s (using 52 data points, chi2=33273117)
[2020-02-06 23:22:15] 2020-02-06 22:21:15,186 | DEBUG    | queue_monitor       | pilot.util.auxiliary.4002876565  | get_job_metrics           | job metrics="coreCount=2 actualCoreCount=3 nEvents=10 leak=-276.60 chi2=33273117"
[2020-02-06 23:22:15] 2020-02-06 22:21:15,186 | INFO     | queue_monitor       | pilot.control.job.4002876565     | get_data_structure        | total number of processed events: 10 (read)
[2020-02-06 23:22:15] 2020-02-06 22:21:15,188 | INFO     | queue_monitor       | pilot.user.atlas.utilities       | get_memory_values         | using path: /home/boinc9/BOINC_TEST/slots/0/PanDA_Pilot-4002876565/memory_monitor_summary.json (trf name=prmon)
[2020-02-06 23:22:15] 2020-02-06 22:21:15,190 | DEBUG    | queue_monitor       | pilot.user.atlas.utilities       | get_memory_monitor_info   | summary_dictionary={'Max': {'rx_packets': 724219, 'nprocs': 10, 'nthreads': 1, 'rx_bytes': 2735835765, 'wtime': 3816, 'rss': 5947572, 'write_bytes': 0, 'vmem': 8680016, 'read_bytes': 0, 'stime': 45, 'tx_bytes': 5543539986, 'pss': 2352822, 'wchar': 0, 'rchar': 0, 'tx_packets': 2448328, 'swap': 0, 'utime': 2339}, 'Avg': {'write_bytes': 0, 'nprocs': 6, 'nthreads': 0, 'rx_bytes': 716908, 'rx_packets': 189, 'vmem': 4116495, 'read_bytes': 0, 'swap': 0, 'tx_bytes': 1452648, 'pss': 1118750, 'wchar': 0, 'rchar': 0, 'tx_packets': 641, 'rss': 2381103}}
[2020-02-06 23:22:15] 2020-02-06 22:21:15,190 | INFO     | queue_monitor       | pilot.user.atlas.utilities       | get_memory_monitor_info   | extracted standard info from prmon json
[2020-02-06 23:22:15] 2020-02-06 22:21:15,190 | INFO     | queue_monitor       | pilot.user.atlas.utilities       | get_memory_monitor_info   | extracted standard memory fields from prmon json
[2020-02-06 23:22:15] 2020-02-06 22:21:15,190 | INFO     | queue_monitor       | pilot.util.auxiliary.4002876565  | timing_report             | ..............................
[2020-02-06 23:22:15] 2020-02-06 22:21:15,190 | INFO     | queue_monitor       | pilot.util.auxiliary.4002876565  | timing_report             | . Timing measurements:
[2020-02-06 23:22:15] 2020-02-06 22:21:15,190 | INFO     | queue_monitor       | pilot.util.auxiliary.4002876565  | timing_report             | . get job = 0 s
[2020-02-06 23:22:15] 2020-02-06 22:21:15,190 | INFO     | queue_monitor       | pilot.util.auxiliary.4002876565  | timing_report             | . initial setup = 4 s
[2020-02-06 23:22:15] 2020-02-06 22:21:15,190 | INFO     | queue_monitor       | pilot.util.auxiliary.4002876565  | timing_report             | . payload setup = 0 s
[2020-02-06 23:22:15] 2020-02-06 22:21:15,190 | INFO     | queue_monitor       | pilot.util.auxiliary.4002876565  | timing_report             | . total setup = 4 s
[2020-02-06 23:22:15] 2020-02-06 22:21:15,190 | INFO     | queue_monitor       | pilot.util.auxiliary.4002876565  | timing_report             | . stage-in = 0 s
[2020-02-06 23:22:15] 2020-02-06 22:21:15,191 | INFO     | queue_monitor       | pilot.util.auxiliary.4002876565  | timing_report             | . payload execution = 4044 s
[2020-02-06 23:22:15] 2020-02-06 22:21:15,191 | INFO     | queue_monitor       | pilot.util.auxiliary.4002876565  | timing_report             | . stage-out = 5 s
[2020-02-06 23:22:15] 2020-02-06 22:21:15,191 | INFO     | queue_monitor       | pilot.util.auxiliary.4002876565  | timing_report             | ..............................
[2020-02-06 23:22:15] 2020-02-06 22:21:15,191 | DEBUG    | queue_monitor       | pilot.control.job.4002876565     | send_state                | wrote heartbeat to file /home/boinc9/BOINC_TEST/slots/0/heartbeat.json
[2020-02-06 23:22:15] 2020-02-06 22:21:15,191 | DEBUG    | queue_monitor       | pilot.control.job                | queue_monitor             | job 4002876565 was dequeued from the monitored payloads queue
[2020-02-06 23:22:15] 2020-02-06 22:21:15,192 | DEBUG    | queue_monitor       | pilot.control.job                | queue_monitor             | tmp job object deleted
[2020-02-06 23:22:15] 2020-02-06 22:21:15,192 | INFO     | retrieve            | pilot.util.auxiliary.4002876565  | make_job_report           | 
[2020-02-06 23:22:15] 2020-02-06 22:21:15,192 | INFO     | retrieve            | pilot.util.auxiliary.4002876565  | make_job_report           | job summary report
[2020-02-06 23:22:15] 2020-02-06 22:21:15,192 | INFO     | retrieve            | pilot.util.auxiliary.4002876565  | make_job_report           | --------------------------------------------------
[2020-02-06 23:22:15] 2020-02-06 22:21:15,192 | INFO     | retrieve            | pilot.util.auxiliary.4002876565  | make_job_report           | PanDA job id: 4002876565
[2020-02-06 23:22:15] 2020-02-06 22:21:15,192 | INFO     | retrieve            | pilot.util.auxiliary.4002876565  | make_job_report           | task id: 000649-1749828-22167
[2020-02-06 23:22:15] 2020-02-06 22:21:15,192 | INFO     | retrieve            | pilot.util.auxiliary.4002876565  | make_job_report           | errors: (none)
[2020-02-06 23:22:15] 2020-02-06 22:21:15,192 | INFO     | retrieve            | pilot.util.auxiliary.4002876565  | make_job_report           | status: LOG_TRANSFER = DONE 
[2020-02-06 23:22:15] 2020-02-06 22:21:15,192 | INFO     | retrieve            | pilot.util.auxiliary.4002876565  | make_job_report           | pilot state: finished 
[2020-02-06 23:22:15] 2020-02-06 22:21:15,193 | INFO     | retrieve            | pilot.util.auxiliary.4002876565  | make_job_report           | transexitcode: 0
[2020-02-06 23:22:15] 2020-02-06 22:21:15,193 | INFO     | retrieve            | pilot.util.auxiliary.4002876565  | make_job_report           | exeerrorcode: 0
[2020-02-06 23:22:15] 2020-02-06 22:21:15,193 | INFO     | retrieve            | pilot.util.auxiliary.4002876565  | make_job_report           | exeerrordiag: 
[2020-02-06 23:22:15] 2020-02-06 22:21:15,193 | INFO     | retrieve            | pilot.util.auxiliary.4002876565  | make_job_report           | exitcode: 0
[2020-02-06 23:22:15] 2020-02-06 22:21:15,193 | INFO     | retrieve            | pilot.util.auxiliary.4002876565  | make_job_report           | exitmsg: OK
[2020-02-06 23:22:15] 2020-02-06 22:21:15,193 | INFO     | retrieve            | pilot.util.auxiliary.4002876565  | make_job_report           | cpuconsumptiontime: 2435 s
[2020-02-06 23:22:15] 2020-02-06 22:21:15,193 | INFO     | retrieve            | pilot.util.auxiliary.4002876565  | make_job_report           | nevents: 10
[2020-02-06 23:22:15] 2020-02-06 22:21:15,193 | INFO     | retrieve            | pilot.util.auxiliary.4002876565  | make_job_report           | neventsw: 0
[2020-02-06 23:22:15] 2020-02-06 22:21:15,193 | INFO     | retrieve            | pilot.util.auxiliary.4002876565  | make_job_report           | pid: 77762
[2020-02-06 23:22:15] 2020-02-06 22:21:15,193 | INFO     | retrieve            | pilot.util.auxiliary.4002876565  | make_job_report           | pgrp: 77762
[2020-02-06 23:22:15] 2020-02-06 22:21:15,193 | INFO     | retrieve            | pilot.util.auxiliary.4002876565  | make_job_report           | corecount: 2
[2020-02-06 23:22:15] 2020-02-06 22:21:15,193 | INFO     | retrieve            | pilot.util.auxiliary.4002876565  | make_job_report           | event service: False
[2020-02-06 23:22:15] 2020-02-06 22:21:15,193 | INFO     | retrieve            | pilot.util.auxiliary.4002876565  | make_job_report           | --------------------------------------------------
[2020-02-06 23:22:15] 2020-02-06 22:21:15,194 | INFO     | retrieve            | pilot.util.auxiliary.4002876565  | make_job_report           | 
[2020-02-06 23:22:15] 2020-02-06 22:21:15,194 | INFO     | retrieve            | pilot.util.queuehandling         | queue_report              | queue jobs has 0 job(s)
[2020-02-06 23:22:15] 2020-02-06 22:21:15,194 | INFO     | retrieve            | pilot.util.queuehandling         | queue_report              | queue payloads has 0 job(s)
[2020-02-06 23:22:15] 2020-02-06 22:21:15,194 | INFO     | retrieve            | pilot.util.queuehandling         | queue_report              | queue data_in has 0 job(s)
[2020-02-06 23:22:15] 2020-02-06 22:21:15,194 | INFO     | retrieve            | pilot.util.queuehandling         | queue_report              | queue data_out has 0 job(s)
[2020-02-06 23:22:15] 2020-02-06 22:21:15,194 | INFO     | retrieve            | pilot.util.queuehandling         | queue_report              | queue current_data_in has 0 job(s)
[2020-02-06 23:22:15] 2020-02-06 22:21:15,194 | INFO     | retrieve            | pilot.util.queuehandling         | queue_report              | queue validated_jobs has 0 job(s)
[2020-02-06 23:22:15] 2020-02-06 22:21:15,194 | INFO     | retrieve            | pilot.util.queuehandling         | queue_report              | queue validated_payloads has 0 job(s)
[2020-02-06 23:22:15] 2020-02-06 22:21:15,194 | INFO     | retrieve            | pilot.util.queuehandling         | queue_report              | queue monitored_payloads has 0 job(s)
[2020-02-06 23:22:15] 2020-02-06 22:21:15,195 | INFO     | retrieve            | pilot.util.queuehandling         | queue_report              | queue finished_jobs has 0 job(s)
[2020-02-06 23:22:15] 2020-02-06 22:21:15,195 | INFO     | retrieve            | pilot.util.queuehandling         | queue_report              | queue finished_payloads has 0 job(s)
[2020-02-06 23:22:15] 2020-02-06 22:21:15,195 | INFO     | retrieve            | pilot.util.queuehandling         | queue_report              | queue finished_data_in has 1 job(s)
[2020-02-06 23:22:15] 2020-02-06 22:21:15,195 | INFO     | retrieve            | pilot.util.queuehandling         | queue_report              | queue finished_data_out has 0 job(s)
[2020-02-06 23:22:15] 2020-02-06 22:21:15,195 | INFO     | retrieve            | pilot.util.queuehandling         | queue_report              | queue failed_jobs has 0 job(s)
[2020-02-06 23:22:15] 2020-02-06 22:21:15,195 | INFO     | retrieve            | pilot.util.queuehandling         | queue_report              | queue failed_payloads has 0 job(s)
[2020-02-06 23:22:15] 2020-02-06 22:21:15,195 | INFO     | retrieve            | pilot.util.queuehandling         | queue_report              | queue failed_data_in has 0 job(s)
[2020-02-06 23:22:15] 2020-02-06 22:21:15,195 | INFO     | retrieve            | pilot.util.queuehandling         | queue_report              | queue failed_data_out has 0 job(s)
[2020-02-06 23:22:15] 2020-02-06 22:21:15,195 | INFO     | retrieve            | pilot.util.queuehandling         | queue_report              | queue completed_jobs has 0 job(s)
[2020-02-06 23:22:15] 2020-02-06 22:21:15,195 | INFO     | retrieve            | pilot.util.queuehandling         | queue_report              | queue completed_jobids has 1 job(s)
[2020-02-06 23:22:15] 2020-02-06 22:21:15,195 | INFO     | retrieve            | pilot.control.job.4002876565     | has_job_completed         | job 4002876565 has completed (purged errors)
[2020-02-06 23:22:15] 2020-02-06 22:21:15,196 | INFO     | retrieve            | pilot.util.processes             | cleanup                   | overall cleanup function is called
[2020-02-06 23:22:15] 2020-02-06 22:21:15,197 | DEBUG    | retrieve            | pilot.util.processes             | cleanup                   | work directory was removed: /home/boinc9/BOINC_TEST/slots/0/PanDA_Pilot-4002876565
[2020-02-06 23:22:15] 2020-02-06 22:21:16,200 | INFO     | retrieve            | pilot.info.jobdata               | collect_zombies           | --- collectZombieJob: --- 10, [77762]
[2020-02-06 23:22:15] 2020-02-06 22:21:16,200 | INFO     | retrieve            | pilot.info.jobdata               | collect_zombies           | zombie collector trying to kill pid 77762
[2020-02-06 23:22:15] 2020-02-06 22:21:16,200 | INFO     | retrieve            | pilot.info.jobdata               | collect_zombies           | harmless exception when collecting zombies: [Errno 10] No child processes
[2020-02-06 23:22:15] 2020-02-06 22:21:17,208 | INFO     | retrieve            | pilot.util.processes             | cleanup                   | collected zombie processes
[2020-02-06 23:22:15] 2020-02-06 22:21:17,208 | INFO     | retrieve            | pilot.util.processes             | cleanup                   | will now attempt to kill all subprocesses of pid=77762
[2020-02-06 23:22:15] 2020-02-06 22:21:17,956 | INFO     | retrieve            | pilot.util.processes             | kill_processes            | process IDs to be killed: [77762] (in reverse order)
[2020-02-06 23:22:15] 2020-02-06 22:21:18,641 | WARNING  | retrieve            | pilot.util.processes             | kill_processes            | found no corresponding commands to process id(s)
[2020-02-06 23:22:15] 2020-02-06 22:21:18,641 | INFO     | retrieve            | pilot.util.processes             | kill_orphans              | Do not look for orphan processes in BOINC jobs
[2020-02-06 23:22:15] 2020-02-06 22:21:18,642 | INFO     | retrieve            | pilot.control.job                | retrieve                  | ready for new job
[2020-02-06 23:22:15] 2020-02-06 22:21:18,642 | INFO     | retrieve            | root                             | retrieve                  | pilot has finished for previous job - re-establishing logging
[2020-02-06 23:22:15] mpi4py not found
[2020-02-06 23:22:15] 2020-02-06 22:21:18,842 | INFO     | retrieve            | pilot.util.auxiliary             | pilot_version_banner      | ****************************************
[2020-02-06 23:22:15] 2020-02-06 22:21:18,843 | INFO     | retrieve            | pilot.util.auxiliary             | pilot_version_banner      | ***  PanDA Pilot version 2.3.4 (12)  ***
[2020-02-06 23:22:15] 2020-02-06 22:21:18,843 | INFO     | retrieve            | pilot.util.auxiliary             | pilot_version_banner      | ****************************************
[2020-02-06 23:22:15] 2020-02-06 22:21:18,843 | INFO     | retrieve            | pilot.util.auxiliary             | pilot_version_banner      | 
[2020-02-06 23:22:15] 2020-02-06 22:21:18,845 | INFO     | retrieve            | pilot.util.auxiliary             | display_architecture_info | architecture information:
[2020-02-06 23:22:15] 2020-02-06 22:21:20,912 | INFO     | retrieve            | pilot.util.auxiliary             | display_architecture_info | 
[2020-02-06 23:22:15] LSB Version:	:core-4.1-amd64:core-4.1-noarch
[2020-02-06 23:22:15] Distributor ID:	CentOS
[2020-02-06 23:22:15] Description:	CentOS Linux release 7.6.1810 (Core) 
[2020-02-06 23:22:15] Release:	7.6.1810
[2020-02-06 23:22:15] Codename:	Core
[2020-02-06 23:22:15] 2020-02-06 22:21:20,912 | INFO     | retrieve            | pilot.util.auxiliary             | pilot_version_banner      | ****************************************
[2020-02-06 23:22:15] 2020-02-06 22:21:21,415 | DEBUG    | retrieve            | pilot.util.monitoring            | check_local_space         | checking local space on /home/boinc9/BOINC_TEST/slots/0
[2020-02-06 23:22:15] 2020-02-06 22:21:21,726 | INFO     | retrieve            | pilot.util.monitoring            | check_local_space         | sufficient remaining disk space (102324240384 B)
[2020-02-06 23:22:15] 2020-02-06 22:21:21,726 | WARNING  | retrieve            | pilot.control.job                | proceed_with_getjob       | since timefloor is set to 0, pilot was only allowed to run one job
[2020-02-06 23:22:15] 2020-02-06 22:21:21,726 | DEBUG    | retrieve            | pilot.control.job                | retrieve                  | [job] retrieve thread has finished
[2020-02-06 23:22:15] 2020-02-06 22:21:21,738 | WARNING  | queue_monitoring    | pilot.util.common                | should_abort              | data:queue_monitoring:received graceful stop - abort after this iteration
[2020-02-06 23:22:15] 2020-02-06 22:21:21,760 | WARNING  | monitor             | pilot.control.monitor            | control                   | aborting monitor loop since graceful_stop has been set
[2020-02-06 23:22:15] 2020-02-06 22:21:21,760 | INFO     | monitor             | pilot.control.monitor            | control                   | [monitor] control thread has ended
[2020-02-06 23:22:15] 2020-02-06 22:21:21,876 | WARNING  | copytool_out        | pilot.util.common                | should_abort              | data:copytool_out:received graceful stop - abort after this iteration
[2020-02-06 23:22:15] 2020-02-06 22:21:21,880 | DEBUG    | validate            | pilot.control.job                | validate                  | [job] validate thread has finished
[2020-02-06 23:22:15] 2020-02-06 22:21:22,212 | DEBUG    | payload             | pilot.control.payload            | control                   | payload control ending since graceful_stop has been set
[2020-02-06 23:22:15] 2020-02-06 22:21:22,212 | DEBUG    | payload             | pilot.control.payload            | control                   | [payload] control thread has finished
[2020-02-06 23:22:15] 2020-02-06 22:21:22,216 | DEBUG    | data                | pilot.control.data               | control                   | data control ending since graceful_stop has been set
[2020-02-06 23:22:15] 2020-02-06 22:21:22,216 | DEBUG    | data                | pilot.control.data               | control                   | [data] control thread has finished
[2020-02-06 23:22:15] 2020-02-06 22:21:22,240 | DEBUG    | MainThread          | pilot.workflow.generic           | run                       | thread count now at 12 threads
[2020-02-06 23:22:15] 2020-02-06 22:21:22,240 | DEBUG    | MainThread          | pilot.workflow.generic           | run                       | enumerate: [<_MainThread(MainThread, started 139889441265472)>, <ExcThread(job, started 139889278584576)>, <ExcThread(queue_monitoring, started 139889022592768)>, <ExcThread(validate_pre, started 139889005807360)>, <ExcThread(queue_monitor, started 139888552830720)>, <ExcThread(failed_post, started 139888544438016)>, <ExcThread(create_data_payload, started 139889030985472)>, <ExcThread(copytool_in, started 139888980629248)>, <ExcThread(execute_payloads, started 139888536045312)>, <ExcThread(job_monitor, started 139888989021952)>, <ExcThread(validate_post, started 139888561223424)>, <ExcThread(copytool_out, started 139889253406464)>]
[2020-02-06 23:22:15] 2020-02-06 22:21:22,252 | DEBUG    | create_data_payload | pilot.control.job                | create_data_payload       | [job] create_data_payload thread has finished
[2020-02-06 23:22:15] 2020-02-06 22:21:22,324 | INFO     | validate_post       | pilot.control.payload            | validate_post             | [payload] validate_post thread has finished
[2020-02-06 23:22:15] 2020-02-06 22:21:22,636 | DEBUG    | job                 | pilot.control.job                | control                   | job control ending since graceful_stop has been set
[2020-02-06 23:22:15] 2020-02-06 22:21:22,636 | DEBUG    | job                 | pilot.control.job                | control                   | [job] control thread has finished
[2020-02-06 23:22:15] 2020-02-06 22:21:22,859 | INFO     | execute_payloads    | pilot.control.payload            | execute_payloads          | [payload] execute_payloads thread has finished
[2020-02-06 23:22:15] 2020-02-06 22:21:22,873 | INFO     | validate_pre        | pilot.control.payload            | validate_pre              | [payload] validate_pre thread has finished
[2020-02-06 23:22:15] 2020-02-06 22:21:22,877 | DEBUG    | copytool_in         | pilot.control.data               | copytool_in               | [data] copytool_in thread has finished
[2020-02-06 23:22:15] 2020-02-06 22:21:22,879 | DEBUG    | copytool_out        | pilot.control.data               | copytool_out              | [data] copytool_out thread has finished
[2020-02-06 23:22:15] 2020-02-06 22:21:22,928 | INFO     | failed_post         | pilot.control.payload            | failed_post               | [payload] failed_post thread has finished
[2020-02-06 23:22:15] 2020-02-06 22:21:23,248 | DEBUG    | MainThread          | pilot.workflow.generic           | run                       | thread count now at 4 threads
[2020-02-06 23:22:15] 2020-02-06 22:21:23,248 | DEBUG    | MainThread          | pilot.workflow.generic           | run                       | enumerate: [<_MainThread(MainThread, started 139889441265472)>, <ExcThread(queue_monitoring, started 139889022592768)>, <ExcThread(queue_monitor, started 139888552830720)>, <ExcThread(job_monitor, started 139888989021952)>]
[2020-02-06 23:22:15] 2020-02-06 22:21:24,232 | WARNING  | queue_monitor       | pilot.util.common                | should_abort              | job:queue_monitor:received graceful stop - abort after this iteration
[2020-02-06 23:22:15] 2020-02-06 22:21:24,232 | DEBUG    | queue_monitor       | pilot.control.job                | queue_monitor             | [job] queue monitor thread has finished
[2020-02-06 23:22:15] 2020-02-06 22:21:24,253 | DEBUG    | MainThread          | pilot.workflow.generic           | run                       | thread count now at 3 threads
[2020-02-06 23:22:15] 2020-02-06 22:21:24,253 | DEBUG    | MainThread          | pilot.workflow.generic           | run                       | enumerate: [<_MainThread(MainThread, started 139889441265472)>, <ExcThread(queue_monitoring, started 139889022592768)>, <ExcThread(job_monitor, started 139888989021952)>]
[2020-02-06 23:22:15] 2020-02-06 22:21:24,752 | DEBUG    | queue_monitoring    | pilot.control.data               | queue_monitoring          | [data] queue_monitor thread has finished
[2020-02-06 23:22:15] 2020-02-06 22:21:25,258 | DEBUG    | MainThread          | pilot.workflow.generic           | run                       | thread count now at 2 threads
[2020-02-06 23:22:15] 2020-02-06 22:21:25,259 | DEBUG    | MainThread          | pilot.workflow.generic           | run                       | enumerate: [<_MainThread(MainThread, started 139889441265472)>, <ExcThread(job_monitor, started 139888989021952)>]
[2020-02-06 23:22:15] 2020-02-06 22:22:12,199 | WARNING  | job_monitor         | pilot.control.job                | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 63 s)
[2020-02-06 23:22:15] 2020-02-06 22:22:12,199 | DEBUG    | job_monitor         | pilot.control.job                | job_monitor               | [job] job monitor thread has finished
[2020-02-06 23:22:15] 2020-02-06 22:22:12,560 | INFO     | MainThread          | pilot.workflow.generic           | run                       | end of generic workflow (traces error code: 0)
[2020-02-06 23:22:15] 2020-02-06 22:22:12,560 | INFO     | MainThread          | root                             | wrap_up                   | traces error code: 0
[2020-02-06 23:22:15] 2020-02-06 22:22:12,560 | INFO     | MainThread          | root                             | wrap_up                   | pilot has finished
[2020-02-06 23:22:15] 2020-02-06 22:22:12 UTC [wrapper] ==== pilot stdout END ====
[2020-02-06 23:22:15] 2020-02-06 22:22:12 UTC [wrapper] ==== wrapper stdout RESUME ====
[2020-02-06 23:22:15] 2020-02-06 22:22:12 UTC [wrapper] Pilot exit status: 0
[2020-02-06 23:22:15] 2020-02-06 22:22:13 UTC [wrapper] STATUSCODE: 0
[2020-02-06 23:22:15] 2020-02-06 22:22:13 UTC [wrapper] apfmon messages muted
[2020-02-06 23:22:15] ---- find pandaID.out ----
[2020-02-06 23:22:15] total 60
[2020-02-06 23:22:15] -rw-------  1 boinc9 boinc 11357 Jul 25  2019 LICENSE
[2020-02-06 23:22:15] -rw-------  1 boinc9 boinc    20 Sep  9 13:04 MANIFEST.IN
[2020-02-06 23:22:15] -rw-------  1 boinc9 boinc     8 Dec 12 19:00 PILOTVERSION
[2020-02-06 23:22:15] -rw-------  1 boinc9 boinc  2212 Nov 14 11:01 README.md
[2020-02-06 23:22:15] -rw-------  1 boinc9 boinc   221 Jul 25  2019 TODO.md
[2020-02-06 23:22:15] -rw-------  1 boinc9 boinc    11 Feb  6 22:13 pandaIDs.out
[2020-02-06 23:22:15] drwx------ 14 boinc9 boinc   320 Feb  6 22:13 pilot
[2020-02-06 23:22:15] -rwx------  1 boinc9 boinc 21225 Dec 12 19:00 pilot.py
[2020-02-06 23:22:15] -rw-------  1 boinc9 boinc   766 Oct 10 16:01 setup.py
[2020-02-06 23:22:15] -rw------- 1 boinc9 boinc 11 Feb  6 22:13 /home/boinc9/BOINC_TEST/slots/0/pilot2/pandaIDs.out
[2020-02-06 23:22:15] 4002876565
[2020-02-06 23:22:15] 
[2020-02-06 23:22:15] 2020-02-06 22:22:13 UTC [wrapper] Test setup, not cleaning
[2020-02-06 23:22:15] 2020-02-06 22:22:13 UTC [wrapper] ==== wrapper stdout END ====
[2020-02-06 23:22:15] 2020-02-06 22:22:13 UTC [wrapper] ==== wrapper stderr END ====
[2020-02-06 23:22:15] 2020-02-06 22:22:13 UTC [wrapper] wrapper wrapperexiting ec=0, duration=4195
[2020-02-06 23:22:15] 2020-02-06 22:22:13 UTC [wrapper] apfmon messages muted
[2020-02-06 23:22:15]  *** Error codes and diagnostics ***
[2020-02-06 23:22:15]     "exeErrorCode": 0,
[2020-02-06 23:22:15]     "exeErrorDiag": "",
[2020-02-06 23:22:15]     "pilotErrorCode": 0,
[2020-02-06 23:22:15]     "pilotErrorDiag": "",
[2020-02-06 23:22:15]  *** Listing of results directory ***
[2020-02-06 23:22:15] total 379320
[2020-02-06 23:22:15] -rw-r--r-- 1 boinc9 boinc    267260 Feb  6 21:30 pilot2.tar.gz
[2020-02-06 23:22:15] -rw-r--r-- 1 boinc9 boinc      4492 Feb  6 21:55 queuedata.json
[2020-02-06 23:22:15] -rwx------ 1 boinc9 boinc     12641 Feb  6 21:58 runpilot2-wrapper.sh
[2020-02-06 23:22:15] -rw-r--r-- 1 boinc9 boinc       107 Feb  6 22:11 wrapper_26015_x86_64-pc-linux-gnu
[2020-02-06 23:22:15] -rwxr-xr-x 1 boinc9 boinc      5573 Feb  6 22:11 run_atlas
[2020-02-06 23:22:15] -rw-r--r-- 1 boinc9 boinc       112 Feb  6 22:11 job.xml
[2020-02-06 23:22:15] drwxrwx--x 2 boinc9 boinc       120 Feb  6 22:11 shared
[2020-02-06 23:22:15] -rw-r--r-- 1 boinc9 boinc      6359 Feb  6 22:11 init_data.xml
[2020-02-06 23:22:15] -rw-r--r-- 1 boinc9 boinc      8192 Feb  6 22:11 boinc_mmap_file
[2020-02-06 23:22:15] -rw-r--r-- 1 boinc9 boinc         0 Feb  6 22:11 boinc_lockfile
[2020-02-06 23:22:15] -rw-r--r-- 1 boinc9 boinc      8553 Feb  6 22:12 start_atlas.sh
[2020-02-06 23:22:15] -rw-r--r-- 1 boinc9 boinc    275414 Feb  6 22:12 input.tar.gz
[2020-02-06 23:22:15] -rw-r--r-- 1 boinc9 boinc       926 Feb  6 22:12 RTE.tar.gz
[2020-02-06 23:22:15] -rw-r--r-- 1 boinc9 boinc 365251149 Feb  6 22:12 EVNT.14296418._001447.pool.root.1
[2020-02-06 23:22:15] -rw-r--r-- 1 boinc9 boinc      2958 Feb  6 22:12 pandaJob.out
[2020-02-06 23:22:15] drwxr-xr-x 3 boinc9 boinc        60 Feb  6 22:12 APPS
[2020-02-06 23:22:15] -rw------- 1 boinc9 boinc   3660951 Feb  6 22:13 agis_schedconf.cvmfs.json
[2020-02-06 23:22:15] -rw------- 1 boinc9 boinc   7858371 Feb  6 22:13 agis_ddmendpoints.json
[2020-02-06 23:22:15] drwx------ 3 boinc9 boinc       300 Feb  6 22:13 pilot2
[2020-02-06 23:22:15] -rw------- 1 boinc9 boinc   9269437 Feb  6 23:19 HITS.000649-1749828-22167._078090.pool.root.1
[2020-02-06 23:22:15] -rw------- 1 boinc9 boinc       799 Feb  6 23:21 memory_monitor_summary.json
[2020-02-06 23:22:15] -rw------- 1 boinc9 boinc    516229 Feb  6 23:21 log.000649-1749828-22167._078090.job.log.tgz.1
[2020-02-06 23:22:15] -rw------- 1 boinc9 boinc     13738 Feb  6 23:21 heartbeat.json
[2020-02-06 23:22:15] -rw------- 1 boinc9 boinc      8486 Feb  6 23:22 pilotlog.txt
[2020-02-06 23:22:15] -rw------- 1 boinc9 boinc    300992 Feb  6 23:22 log.000649-1749828-22167._078090.job.log.1
[2020-02-06 23:22:15] -rw------- 1 boinc9 boinc       494 Feb  6 23:22 18iMDmoO3JwnShfckohDCDFpABFKDmABFKDmbb0VDmABFKDmcaHM6m.diag
[2020-02-06 23:22:15] -rw------- 1 boinc9 boinc       499 Feb  6 23:22 output.list
[2020-02-06 23:22:15] -rw-r--r-- 1 boinc9 boinc       742 Feb  6 23:22 runtime_log
[2020-02-06 23:22:15] -rw------- 1 boinc9 boinc    839680 Feb  6 23:22 result.tar.gz
[2020-02-06 23:22:15] -rw-r--r-- 1 boinc9 boinc      7704 Feb  6 23:22 runtime_log.err
[2020-02-06 23:22:15] -rw-r--r-- 1 boinc9 boinc     31131 Feb  6 23:22 stderr.txt
[2020-02-06 23:22:16] HITS file was successfully produced:
[2020-02-06 23:22:16] -rw------- 1 boinc9 boinc 9269437 Feb  6 23:19 shared/HITS.pool.root.1
[2020-02-06 23:22:16]  *** Contents of shared directory: ***
[2020-02-06 23:22:16] total 366856
[2020-02-06 23:22:16] -rw-r--r-- 1 boinc9 boinc      8553 Feb  6 22:11 start_atlas.sh
[2020-02-06 23:22:16] -rw-r--r-- 1 boinc9 boinc    275414 Feb  6 22:11 input.tar.gz
[2020-02-06 23:22:16] -rw-r--r-- 1 boinc9 boinc       926 Feb  6 22:11 RTE.tar.gz
[2020-02-06 23:22:16] -rw-r--r-- 1 boinc9 boinc 365251149 Feb  6 22:11 ATLAS.root_0
[2020-02-06 23:22:16] -rw------- 1 boinc9 boinc   9269437 Feb  6 23:19 HITS.pool.root.1
[2020-02-06 23:22:16] -rw------- 1 boinc9 boinc    839680 Feb  6 23:22 result.tar.gz
23:22:17 (41537): run_atlas exited; CPU time 2415.082573
23:22:17 (41537): called boinc_finish(0)

</stderr_txt>
]]>


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