| Name | PvbNDmnO3JwnShfckohDCDFpABFKDmABFKDmyiALDmmEFKDmnpSqWn_1 |
| Workunit | 1980764 |
| Created | 7 Feb 2020, 19:33:08 UTC |
| Sent | 9 Feb 2020, 2:00:09 UTC |
| Report deadline | 16 Feb 2020, 2:00:09 UTC |
| Received | 9 Feb 2020, 2:58:48 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 4064 |
| Run time | 56 min 51 sec |
| CPU time | 1 hours 13 min 18 sec |
| Validate state | Valid |
| Credit | 31.24 |
| Device peak FLOPS | 3.96 GFLOPS |
| Application version | ATLAS Simulation v1.03 (native_mt) x86_64-pc-linux-gnu |
| Peak working set size | 1.81 GB |
| Peak swap size | 2.55 GB |
| Peak disk usage | 719.45 MB |
Stderr output
<core_client_version>7.16.1</core_client_version>
<![CDATA[
<stderr_txt>
03:01:41 (9399): wrapper (7.7.26015): starting
03:01:41 (9399): wrapper: running run_atlas (--nthreads 2)
[2020-02-09 03:01:41] Arguments: --nthreads 2
[2020-02-09 03:01:41] Threads: 2
[2020-02-09 03:01:41] Checking for CVMFS
[2020-02-09 03:01:42] Probing /cvmfs/atlas.cern.ch... OK
[2020-02-09 03:01:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2020-02-09 03:01:42] Probing /cvmfs/grid.cern.ch... OK
[2020-02-09 03:01:42] Probing /cvmfs/cernvm-prod.cern.ch... OK
[2020-02-09 03:01:42] Probing /cvmfs/sft.cern.ch... OK
[2020-02-09 03:01:43] Probing /cvmfs/alice.cern.ch... OK
[2020-02-09 03:01:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2020-02-09 03:01:43] 2.7.0.0 3672 170 46776 60201 2 78 3786346 4194304 588 65024 0 80977 99.9271 64431 2771 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2020-02-09 03:01:43] CVMFS is ok
[2020-02-09 03:01:43] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/images/singularity/x86_64-centos7.img
[2020-02-09 03:01:43] Checking for singularity binary...
[2020-02-09 03:01:43] Using singularity found in PATH at /usr/bin/singularity
[2020-02-09 03:01:43] Running /usr/bin/singularity --version
[2020-02-09 03:01:43] singularity version 3.5.2-1.1.el7
[2020-02-09 03:01:43] Checking singularity works with /usr/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/images/singularity/x86_64-centos7.img hostname
[2020-02-09 03:01:44] FX8S
[2020-02-09 03:01:44] Singularity works
[2020-02-09 03:01:44] Set ATHENA_PROC_NUMBER=2
[2020-02-09 03:01:44] Starting ATLAS job with PandaID=4002876565
[2020-02-09 03:01:44] Running command: /usr/bin/singularity exec --pwd /var/lib/boinc/slots/1 -B /cvmfs,/var /cvmfs/atlas.cern.ch/repo/containers/images/singularity/x86_64-centos7.img sh start_atlas.sh
[2020-02-09 03:58:29] *** The last 200 lines of the pilot log: ***
[2020-02-09 03:58:29] "wallTime": 1
[2020-02-09 03:58:29] },
[2020-02-09 03:58:29] "preExe": {
[2020-02-09 03:58:29] "cpuTime": 6,
[2020-02-09 03:58:29] "wallTime": 16
[2020-02-09 03:58:29] },
[2020-02-09 03:58:29] "total": {
[2020-02-09 03:58:29] "cpuTime": 168,
[2020-02-09 03:58:29] "wallTime": 345
[2020-02-09 03:58:29] },
[2020-02-09 03:58:29] "validation": {
[2020-02-09 03:58:29] "cpuTime": 0,
[2020-02-09 03:58:29] "wallTime": 0
[2020-02-09 03:58:29] },
[2020-02-09 03:58:29] "wallTime": 328
[2020-02-09 03:58:29] }
[2020-02-09 03:58:29] },
[2020-02-09 03:58:29] "machine": {
[2020-02-09 03:58:29] "cpu_family": "21",
[2020-02-09 03:58:29] "linux_distribution": [
[2020-02-09 03:58:29] "CentOS Linux",
[2020-02-09 03:58:29] "7.6.1810",
[2020-02-09 03:58:29] "Core"
[2020-02-09 03:58:29] ],
[2020-02-09 03:58:29] "model": "2",
[2020-02-09 03:58:29] "model_name": "AMD FX-8370E Eight-Core Processor",
[2020-02-09 03:58:29] "node": "FX8S",
[2020-02-09 03:58:29] "platform": "Linux-3.10.0-1062.el7.x86_64-x86_64-with-centos-7.6.1810-Core"
[2020-02-09 03:58:29] },
[2020-02-09 03:58:29] "transform": {
[2020-02-09 03:58:29] "cpuEfficiency": 0.709,
[2020-02-09 03:58:29] "cpuPWEfficiency": 0.7377,
[2020-02-09 03:58:29] "cpuTime": 18,
[2020-02-09 03:58:29] "cpuTimeTotal": 4605,
[2020-02-09 03:58:29] "externalCpuTime": 34,
[2020-02-09 03:58:29] "processedEvents": 10,
[2020-02-09 03:58:29] "trfPredata": null,
[2020-02-09 03:58:29] "wallTime": 3119
[2020-02-09 03:58:29] }
[2020-02-09 03:58:29] }
[2020-02-09 03:58:29] }
[2020-02-09 03:58:29] 2020-02-09 02:57:25,657 | DEBUG | queue_monitor | pilot.util.auxiliary.4002876565 | update_server | xml:will send fileinfo
[2020-02-09 03:58:29] 2020-02-09 02:57:25,657 | DEBUG | queue_monitor | pilot.control.job | get_proper_state | state=finished
[2020-02-09 03:58:29] 2020-02-09 02:57:25,657 | DEBUG | queue_monitor | pilot.control.job | get_proper_state | serverstate=running
[2020-02-09 03:58:29] 2020-02-09 02:57:25,658 | DEBUG | queue_monitor | pilot.control.job | get_proper_state | serverstate=finished
[2020-02-09 03:58:29] 2020-02-09 02:57:25,658 | INFO | queue_monitor | pilot.control.job.4002876565 | send_state | pilot will not update the server (heartbeat message will be written to file)
[2020-02-09 03:58:29] 2020-02-09 02:57:25,658 | INFO | queue_monitor | pilot.control.job.4002876565 | send_state | job 4002876565 has finished - writing final server update
[2020-02-09 03:58:29] 2020-02-09 02:57:25,658 | DEBUG | queue_monitor | pilot.control.job.4002876565 | get_data_structure | building data structure to be sent to server with heartbeat
[2020-02-09 03:58:29] 2020-02-09 02:57:25,659 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | get_job_metrics | will not add max space = -353127937 B to job metrics
[2020-02-09 03:58:29] 2020-02-09 02:57:25,660 | DEBUG | queue_monitor | pilot.api.analytics | get_fitted_data | removing tails from data to be fitted
[2020-02-09 03:58:29] 2020-02-09 02:57:25,661 | INFO | queue_monitor | pilot.api.analytics | get_fitted_data | fitting pss+swap vs Time
[2020-02-09 03:58:29] 2020-02-09 02:57:25,662 | INFO | queue_monitor | pilot.api.analytics | get_fitted_data | current memory leak: -202.32 B/s (using 46 data points, chi2=8826072)
[2020-02-09 03:58:29] 2020-02-09 02:57:25,662 | DEBUG | queue_monitor | pilot.util.auxiliary.4002876565 | get_job_metrics | job metrics="coreCount=2 actualCoreCount=2 nEvents=10 leak=-202.32 chi2=8826072"
[2020-02-09 03:58:29] 2020-02-09 02:57:25,662 | INFO | queue_monitor | pilot.control.job.4002876565 | get_data_structure | total number of processed events: 10 (read)
[2020-02-09 03:58:29] 2020-02-09 02:57:25,663 | INFO | queue_monitor | pilot.user.atlas.utilities | get_memory_values | using path: /var/lib/boinc/slots/1/PanDA_Pilot-4002876565/memory_monitor_summary.json (trf name=prmon)
[2020-02-09 03:58:29] 2020-02-09 02:57:25,665 | DEBUG | queue_monitor | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'Max': {'rx_packets': 67364, 'nprocs': 10, 'nthreads': 1, 'rx_bytes': 64288714, 'wtime': 3222, 'rss': 5719712, 'write_bytes': 0, 'vmem': 8686800, 'read_bytes': 0, 'stime': 157, 'tx_bytes': 23482510, 'pss': 2317611, 'wchar': 0, 'rchar': 0, 'tx_packets': 34764, 'swap': 0, 'utime': 4359}, 'Avg': {'write_bytes': 0, 'nprocs': 6, 'nthreads': 0, 'rx_bytes': 19953, 'rx_packets': 20, 'vmem': 6255731, 'read_bytes': 0, 'swap': 0, 'tx_bytes': 7288, 'pss': 1753960, 'wchar': 0, 'rchar': 0, 'tx_packets': 10, 'rss': 3918097}}
[2020-02-09 03:58:29] 2020-02-09 02:57:25,666 | INFO | queue_monitor | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard info from prmon json
[2020-02-09 03:58:29] 2020-02-09 02:57:25,666 | INFO | queue_monitor | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard memory fields from prmon json
[2020-02-09 03:58:29] 2020-02-09 02:57:25,666 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | ..............................
[2020-02-09 03:58:29] 2020-02-09 02:57:25,666 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . Timing measurements:
[2020-02-09 03:58:29] 2020-02-09 02:57:25,667 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . get job = 1 s
[2020-02-09 03:58:29] 2020-02-09 02:57:25,667 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . initial setup = 2 s
[2020-02-09 03:58:29] 2020-02-09 02:57:25,667 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . payload setup = 0 s
[2020-02-09 03:58:29] 2020-02-09 02:57:25,667 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . total setup = 2 s
[2020-02-09 03:58:29] 2020-02-09 02:57:25,667 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . stage-in = 1 s
[2020-02-09 03:58:29] 2020-02-09 02:57:25,667 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . payload execution = 3277 s
[2020-02-09 03:58:29] 2020-02-09 02:57:25,667 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | . stage-out = 5 s
[2020-02-09 03:58:29] 2020-02-09 02:57:25,668 | INFO | queue_monitor | pilot.util.auxiliary.4002876565 | timing_report | ..............................
[2020-02-09 03:58:29] 2020-02-09 02:57:25,674 | DEBUG | queue_monitor | pilot.control.job.4002876565 | send_state | wrote heartbeat to file /var/lib/boinc/slots/1/heartbeat.json
[2020-02-09 03:58:29] 2020-02-09 02:57:25,674 | DEBUG | queue_monitor | pilot.control.job | queue_monitor | job 4002876565 was dequeued from the monitored payloads queue
[2020-02-09 03:58:29] 2020-02-09 02:57:25,674 | DEBUG | queue_monitor | pilot.control.job | queue_monitor | tmp job object deleted
[2020-02-09 03:58:29] 2020-02-09 02:57:25,683 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report |
[2020-02-09 03:58:29] 2020-02-09 02:57:25,683 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | job summary report
[2020-02-09 03:58:29] 2020-02-09 02:57:25,683 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | --------------------------------------------------
[2020-02-09 03:58:29] 2020-02-09 02:57:25,683 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | PanDA job id: 4002876565
[2020-02-09 03:58:29] 2020-02-09 02:57:25,684 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | task id: 000649-1749806-30031
[2020-02-09 03:58:29] 2020-02-09 02:57:25,684 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | errors: (none)
[2020-02-09 03:58:29] 2020-02-09 02:57:25,684 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | status: LOG_TRANSFER = DONE
[2020-02-09 03:58:29] 2020-02-09 02:57:25,684 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | pilot state: finished
[2020-02-09 03:58:29] 2020-02-09 02:57:25,684 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | transexitcode: 0
[2020-02-09 03:58:29] 2020-02-09 02:57:25,684 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | exeerrorcode: 0
[2020-02-09 03:58:29] 2020-02-09 02:57:25,684 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | exeerrordiag:
[2020-02-09 03:58:29] 2020-02-09 02:57:25,685 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | exitcode: 0
[2020-02-09 03:58:29] 2020-02-09 02:57:25,685 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | exitmsg: OK
[2020-02-09 03:58:29] 2020-02-09 02:57:25,685 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | cpuconsumptiontime: 4541 s
[2020-02-09 03:58:29] 2020-02-09 02:57:25,685 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | nevents: 10
[2020-02-09 03:58:29] 2020-02-09 02:57:25,685 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | neventsw: 0
[2020-02-09 03:58:29] 2020-02-09 02:57:25,685 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | pid: 16019
[2020-02-09 03:58:29] 2020-02-09 02:57:25,686 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | pgrp: 16019
[2020-02-09 03:58:29] 2020-02-09 02:57:25,686 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | corecount: 2
[2020-02-09 03:58:29] 2020-02-09 02:57:25,686 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | event service: False
[2020-02-09 03:58:29] 2020-02-09 02:57:25,686 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report | --------------------------------------------------
[2020-02-09 03:58:29] 2020-02-09 02:57:25,686 | INFO | retrieve | pilot.util.auxiliary.4002876565 | make_job_report |
[2020-02-09 03:58:29] 2020-02-09 02:57:25,686 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue jobs has 0 job(s)
[2020-02-09 03:58:29] 2020-02-09 02:57:25,686 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue payloads has 0 job(s)
[2020-02-09 03:58:29] 2020-02-09 02:57:25,687 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue data_in has 0 job(s)
[2020-02-09 03:58:29] 2020-02-09 02:57:25,687 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue data_out has 0 job(s)
[2020-02-09 03:58:29] 2020-02-09 02:57:25,687 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue current_data_in has 0 job(s)
[2020-02-09 03:58:29] 2020-02-09 02:57:25,687 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue validated_jobs has 0 job(s)
[2020-02-09 03:58:29] 2020-02-09 02:57:25,687 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue validated_payloads has 0 job(s)
[2020-02-09 03:58:29] 2020-02-09 02:57:25,688 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue monitored_payloads has 0 job(s)
[2020-02-09 03:58:29] 2020-02-09 02:57:25,688 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue finished_jobs has 0 job(s)
[2020-02-09 03:58:29] 2020-02-09 02:57:25,688 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue finished_payloads has 0 job(s)
[2020-02-09 03:58:29] 2020-02-09 02:57:25,688 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue finished_data_in has 1 job(s)
[2020-02-09 03:58:29] 2020-02-09 02:57:25,688 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue finished_data_out has 0 job(s)
[2020-02-09 03:58:29] 2020-02-09 02:57:25,688 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue failed_jobs has 0 job(s)
[2020-02-09 03:58:29] 2020-02-09 02:57:25,688 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue failed_payloads has 0 job(s)
[2020-02-09 03:58:29] 2020-02-09 02:57:25,689 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue failed_data_in has 0 job(s)
[2020-02-09 03:58:29] 2020-02-09 02:57:25,689 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue failed_data_out has 0 job(s)
[2020-02-09 03:58:29] 2020-02-09 02:57:25,689 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue completed_jobs has 0 job(s)
[2020-02-09 03:58:29] 2020-02-09 02:57:25,689 | INFO | retrieve | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s)
[2020-02-09 03:58:29] 2020-02-09 02:57:25,689 | INFO | retrieve | pilot.control.job.4002876565 | has_job_completed | job 4002876565 has completed (purged errors)
[2020-02-09 03:58:29] 2020-02-09 02:57:25,689 | INFO | retrieve | pilot.util.processes | cleanup | overall cleanup function is called
[2020-02-09 03:58:29] 2020-02-09 02:57:25,696 | DEBUG | retrieve | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc/slots/1/PanDA_Pilot-4002876565
[2020-02-09 03:58:29] 2020-02-09 02:57:26,701 | WARNING | job_monitor | pilot.control.job | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 72 s)
[2020-02-09 03:58:29] 2020-02-09 02:57:26,701 | INFO | retrieve | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [16019]
[2020-02-09 03:58:29] 2020-02-09 02:57:26,702 | INFO | retrieve | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 16019
[2020-02-09 03:58:29] 2020-02-09 02:57:26,702 | INFO | retrieve | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes
[2020-02-09 03:58:29] 2020-02-09 02:57:27,703 | INFO | retrieve | pilot.util.processes | cleanup | collected zombie processes
[2020-02-09 03:58:29] 2020-02-09 02:57:27,704 | INFO | retrieve | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=16019
[2020-02-09 03:58:29] 2020-02-09 02:57:27,890 | INFO | retrieve | pilot.util.processes | kill_processes | process IDs to be killed: [16019] (in reverse order)
[2020-02-09 03:58:29] 2020-02-09 02:57:28,020 | WARNING | retrieve | pilot.util.processes | kill_processes | found no corresponding commands to process id(s)
[2020-02-09 03:58:29] 2020-02-09 02:57:28,021 | INFO | retrieve | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs
[2020-02-09 03:58:29] 2020-02-09 02:57:28,021 | INFO | retrieve | pilot.control.job | retrieve | ready for new job
[2020-02-09 03:58:29] 2020-02-09 02:57:28,021 | INFO | retrieve | root | retrieve | pilot has finished for previous job - re-establishing logging
[2020-02-09 03:58:29] mpi4py not found
[2020-02-09 03:58:29] 2020-02-09 02:57:28,050 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner | ****************************************
[2020-02-09 03:58:29] 2020-02-09 02:57:28,051 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 2.3.4 (12) ***
[2020-02-09 03:58:29] 2020-02-09 02:57:28,051 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner | ****************************************
[2020-02-09 03:58:29] 2020-02-09 02:57:28,051 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner |
[2020-02-09 03:58:29] 2020-02-09 02:57:28,051 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner | pilot is running in a VM
[2020-02-09 03:58:29] 2020-02-09 02:57:28,051 | INFO | retrieve | pilot.util.auxiliary | display_architecture_info | architecture information:
[2020-02-09 03:58:29] 2020-02-09 02:57:28,380 | INFO | retrieve | pilot.util.auxiliary | display_architecture_info |
[2020-02-09 03:58:29] LSB Version: :core-4.1-amd64:core-4.1-noarch
[2020-02-09 03:58:29] Distributor ID: CentOS
[2020-02-09 03:58:29] Description: CentOS Linux release 7.6.1810 (Core)
[2020-02-09 03:58:29] Release: 7.6.1810
[2020-02-09 03:58:29] Codename: Core
[2020-02-09 03:58:29] 2020-02-09 02:57:28,381 | INFO | retrieve | pilot.util.auxiliary | pilot_version_banner | ****************************************
[2020-02-09 03:58:29] 2020-02-09 02:57:28,891 | DEBUG | retrieve | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc/slots/1
[2020-02-09 03:58:29] 2020-02-09 02:57:28,924 | INFO | retrieve | pilot.util.monitoring | check_local_space | sufficient remaining disk space (8500805632 B)
[2020-02-09 03:58:29] 2020-02-09 02:57:28,924 | WARNING | retrieve | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job
[2020-02-09 03:58:29] 2020-02-09 02:57:28,925 | DEBUG | retrieve | pilot.control.job | retrieve | [job] retrieve thread has finished
[2020-02-09 03:58:29] 2020-02-09 02:57:28,965 | WARNING | copytool_out | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration
[2020-02-09 03:58:29] 2020-02-09 02:57:29,299 | DEBUG | job | pilot.control.job | control | job control ending since graceful_stop has been set
[2020-02-09 03:58:29] 2020-02-09 02:57:29,299 | DEBUG | job | pilot.control.job | control | [job] control thread has finished
[2020-02-09 03:58:29] 2020-02-09 02:57:29,386 | INFO | validate_post | pilot.control.payload | validate_post | [payload] validate_post thread has finished
[2020-02-09 03:58:29] 2020-02-09 02:57:29,427 | DEBUG | data | pilot.control.data | control | data control ending since graceful_stop has been set
[2020-02-09 03:58:29] 2020-02-09 02:57:29,427 | DEBUG | data | pilot.control.data | control | [data] control thread has finished
[2020-02-09 03:58:29] 2020-02-09 02:57:29,663 | DEBUG | create_data_payload | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished
[2020-02-09 03:58:29] 2020-02-09 02:57:29,664 | INFO | execute_payloads | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished
[2020-02-09 03:58:29] 2020-02-09 02:57:29,665 | DEBUG | validate | pilot.control.job | validate | [job] validate thread has finished
[2020-02-09 03:58:29] 2020-02-09 02:57:29,665 | INFO | monitor | pilot.control.monitor | control | [monitor] control thread has ended
[2020-02-09 03:58:29] 2020-02-09 02:57:29,665 | DEBUG | copytool_in | pilot.control.data | copytool_in | [data] copytool_in thread has finished
[2020-02-09 03:58:29] 2020-02-09 02:57:29,674 | DEBUG | MainThread | pilot.workflow.generic | run | thread count now at 8 threads
[2020-02-09 03:58:29] 2020-02-09 02:57:29,676 | DEBUG | MainThread | pilot.workflow.generic | run | enumerate: [<_MainThread(MainThread, started 140359151200064)>, <ExcThread(payload, started 140358457489152)>, <ExcThread(copytool_out, started 140358449096448)>, <ExcThread(queue_monitor, started 140358937364224)>, <ExcThread(failed_post, started 140358415525632)>, <ExcThread(validate_pre, started 140358440703744)>, <ExcThread(queue_monitoring, started 140358054835968)>, <ExcThread(job_monitor, started 140358954149632)>]
[2020-02-09 03:58:29] 2020-02-09 02:57:29,675 | INFO | validate_pre | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished
[2020-02-09 03:58:29] 2020-02-09 02:57:29,967 | DEBUG | copytool_out | pilot.control.data | copytool_out | [data] copytool_out thread has finished
[2020-02-09 03:58:29] 2020-02-09 02:57:30,137 | DEBUG | payload | pilot.control.payload | control | payload control ending since graceful_stop has been set
[2020-02-09 03:58:29] 2020-02-09 02:57:30,137 | DEBUG | payload | pilot.control.payload | control | [payload] control thread has finished
[2020-02-09 03:58:29] 2020-02-09 02:57:30,202 | INFO | failed_post | pilot.control.payload | failed_post | [payload] failed_post thread has finished
[2020-02-09 03:58:29] 2020-02-09 02:57:30,680 | DEBUG | MainThread | pilot.workflow.generic | run | thread count now at 4 threads
[2020-02-09 03:58:29] 2020-02-09 02:57:30,680 | DEBUG | MainThread | pilot.workflow.generic | run | enumerate: [<_MainThread(MainThread, started 140359151200064)>, <ExcThread(queue_monitor, started 140358937364224)>, <ExcThread(queue_monitoring, started 140358054835968)>, <ExcThread(job_monitor, started 140358954149632)>]
[2020-02-09 03:58:29] 2020-02-09 02:57:30,691 | WARNING | queue_monitor | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration
[2020-02-09 03:58:29] 2020-02-09 02:57:30,692 | DEBUG | queue_monitor | pilot.control.job | queue_monitor | [job] queue monitor thread has finished
[2020-02-09 03:58:29] 2020-02-09 02:57:31,179 | WARNING | queue_monitoring | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration
[2020-02-09 03:58:29] 2020-02-09 02:57:31,691 | DEBUG | MainThread | pilot.workflow.generic | run | thread count now at 3 threads
[2020-02-09 03:58:29] 2020-02-09 02:57:31,691 | DEBUG | MainThread | pilot.workflow.generic | run | enumerate: [<_MainThread(MainThread, started 140359151200064)>, <ExcThread(queue_monitoring, started 140358054835968)>, <ExcThread(job_monitor, started 140358954149632)>]
[2020-02-09 03:58:29] 2020-02-09 02:57:34,197 | DEBUG | queue_monitoring | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished
[2020-02-09 03:58:29] 2020-02-09 02:57:34,725 | DEBUG | MainThread | pilot.workflow.generic | run | thread count now at 2 threads
[2020-02-09 03:58:29] 2020-02-09 02:57:34,726 | DEBUG | MainThread | pilot.workflow.generic | run | enumerate: [<_MainThread(MainThread, started 140359151200064)>, <ExcThread(job_monitor, started 140358954149632)>]
[2020-02-09 03:58:29] 2020-02-09 02:58:28,308 | WARNING | job_monitor | pilot.control.job | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 134 s)
[2020-02-09 03:58:29] 2020-02-09 02:58:28,308 | DEBUG | job_monitor | pilot.control.job | job_monitor | [job] job monitor thread has finished
[2020-02-09 03:58:29] 2020-02-09 02:58:29,176 | INFO | MainThread | pilot.workflow.generic | run | end of generic workflow (traces error code: 0)
[2020-02-09 03:58:29] 2020-02-09 02:58:29,177 | INFO | MainThread | root | wrap_up | traces error code: 0
[2020-02-09 03:58:29] 2020-02-09 02:58:29,177 | INFO | MainThread | root | wrap_up | pilot has finished
[2020-02-09 03:58:29] 2020-02-09 02:58:29 UTC [wrapper] ==== pilot stdout END ====
[2020-02-09 03:58:29] 2020-02-09 02:58:29 UTC [wrapper] ==== wrapper stdout RESUME ====
[2020-02-09 03:58:29] 2020-02-09 02:58:29 UTC [wrapper] Pilot exit status: 0
[2020-02-09 03:58:29] 2020-02-09 02:58:29 UTC [wrapper] STATUSCODE: 0
[2020-02-09 03:58:29] 2020-02-09 02:58:29 UTC [wrapper] apfmon messages muted
[2020-02-09 03:58:29] ---- find pandaID.out ----
[2020-02-09 03:58:29] total 60
[2020-02-09 03:58:29] -rw-------. 1 boinc boinc 11357 Jul 25 2019 LICENSE
[2020-02-09 03:58:29] -rw-------. 1 boinc boinc 20 Sep 9 13:04 MANIFEST.IN
[2020-02-09 03:58:29] -rw-------. 1 boinc boinc 8 Dec 12 19:00 PILOTVERSION
[2020-02-09 03:58:29] -rw-------. 1 boinc boinc 2212 Nov 14 11:01 README.md
[2020-02-09 03:58:29] -rw-------. 1 boinc boinc 221 Jul 25 2019 TODO.md
[2020-02-09 03:58:29] -rw-------. 1 boinc boinc 11 Feb 9 03:02 pandaIDs.out
[2020-02-09 03:58:29] drwx------. 14 boinc boinc 216 Feb 9 03:02 pilot
[2020-02-09 03:58:29] -rwx------. 1 boinc boinc 21225 Dec 12 19:00 pilot.py
[2020-02-09 03:58:29] -rw-------. 1 boinc boinc 766 Oct 10 16:01 setup.py
[2020-02-09 03:58:29] -rw-------. 1 boinc boinc 11 Feb 9 03:02 /var/lib/boinc/slots/1/pilot2/pandaIDs.out
[2020-02-09 03:58:29] 4002876565
[2020-02-09 03:58:29]
[2020-02-09 03:58:29] 2020-02-09 02:58:29 UTC [wrapper] Test setup, not cleaning
[2020-02-09 03:58:29] 2020-02-09 02:58:29 UTC [wrapper] ==== wrapper stdout END ====
[2020-02-09 03:58:29] 2020-02-09 02:58:29 UTC [wrapper] ==== wrapper stderr END ====
[2020-02-09 03:58:29] 2020-02-09 02:58:29 UTC [wrapper] wrapper wrapperexiting ec=0, duration=3404
[2020-02-09 03:58:29] 2020-02-09 02:58:29 UTC [wrapper] apfmon messages muted
[2020-02-09 03:58:29] *** Error codes and diagnostics ***
[2020-02-09 03:58:29] "exeErrorCode": 0,
[2020-02-09 03:58:29] "exeErrorDiag": "",
[2020-02-09 03:58:29] "pilotErrorCode": 0,
[2020-02-09 03:58:29] "pilotErrorDiag": "",
[2020-02-09 03:58:29] *** Listing of results directory ***
[2020-02-09 03:58:29] insgesamt 379012
[2020-02-09 03:58:29] -rw-r--r--. 1 boinc boinc 267260 6. Feb 21:30 pilot2.tar.gz
[2020-02-09 03:58:29] -rw-r--r--. 1 boinc boinc 4492 6. Feb 21:55 queuedata.json
[2020-02-09 03:58:29] -rwx------. 1 boinc boinc 12641 6. Feb 21:57 runpilot2-wrapper.sh
[2020-02-09 03:58:29] -rw-r--r--. 1 boinc boinc 107 9. Feb 03:01 wrapper_26015_x86_64-pc-linux-gnu
[2020-02-09 03:58:29] -rwxr-xr-x. 1 boinc boinc 5573 9. Feb 03:01 run_atlas
[2020-02-09 03:58:29] -rw-r--r--. 1 boinc boinc 112 9. Feb 03:01 job.xml
[2020-02-09 03:58:29] drwxrwx--x. 2 boinc boinc 86 9. Feb 03:01 shared
[2020-02-09 03:58:29] -rw-r--r--. 1 boinc boinc 5902 9. Feb 03:01 init_data.xml
[2020-02-09 03:58:29] -rw-r--r--. 1 boinc boinc 0 9. Feb 03:01 boinc_lockfile
[2020-02-09 03:58:29] -rw-r--r--. 1 boinc boinc 365251149 9. Feb 03:01 EVNT.14296418._001447.pool.root.1
[2020-02-09 03:58:29] -rw-r--r--. 1 boinc boinc 8513 9. Feb 03:01 start_atlas.sh
[2020-02-09 03:58:29] -rw-r--r--. 1 boinc boinc 926 9. Feb 03:01 RTE.tar.gz
[2020-02-09 03:58:29] -rw-r--r--. 1 boinc boinc 275417 9. Feb 03:01 input.tar.gz
[2020-02-09 03:58:29] -rw-r--r--. 1 boinc boinc 2958 9. Feb 03:01 pandaJob.out
[2020-02-09 03:58:29] drwxr-xr-x. 3 boinc boinc 17 9. Feb 03:01 APPS
[2020-02-09 03:58:29] -rw-------. 1 boinc boinc 3641899 9. Feb 03:02 agis_schedconf.cvmfs.json
[2020-02-09 03:58:29] -rw-------. 1 boinc boinc 7859698 9. Feb 03:02 agis_ddmendpoints.json
[2020-02-09 03:58:29] drwx------. 3 boinc boinc 229 9. Feb 03:02 pilot2
[2020-02-09 03:58:29] -rw-r--r--. 1 boinc boinc 535 9. Feb 03:42 boinc_task_state.xml
[2020-02-09 03:58:29] -rw-------. 1 boinc boinc 9044916 9. Feb 03:56 HITS.000649-1749806-30031._078090.pool.root.1
[2020-02-09 03:58:29] -rw-------. 1 boinc boinc 787 9. Feb 03:57 memory_monitor_summary.json
[2020-02-09 03:58:29] -rw-------. 1 boinc boinc 515522 9. Feb 03:57 log.000649-1749806-30031._078090.job.log.tgz.1
[2020-02-09 03:58:29] -rw-------. 1 boinc boinc 12291 9. Feb 03:57 heartbeat.json
[2020-02-09 03:58:29] -rw-r--r--. 1 boinc boinc 8192 9. Feb 03:58 boinc_mmap_file
[2020-02-09 03:58:29] -rw-r--r--. 1 boinc boinc 26 9. Feb 03:58 wrapper_checkpoint.txt
[2020-02-09 03:58:29] -rw-------. 1 boinc boinc 8230 9. Feb 03:58 pilotlog.txt
[2020-02-09 03:58:29] -rw-------. 1 boinc boinc 262547 9. Feb 03:58 log.000649-1749806-30031._078090.job.log.1
[2020-02-09 03:58:29] -rw-------. 1 boinc boinc 488 9. Feb 03:58 PvbNDmnO3JwnShfckohDCDFpABFKDmABFKDmyiALDmmEFKDmnpSqWn.diag
[2020-02-09 03:58:29] -rw-r--r--. 1 boinc boinc 7241 9. Feb 03:58 runtime_log.err
[2020-02-09 03:58:29] -rw-------. 1 boinc boinc 499 9. Feb 03:58 output.list
[2020-02-09 03:58:29] -rw-r--r--. 1 boinc boinc 742 9. Feb 03:58 runtime_log
[2020-02-09 03:58:29] -rw-------. 1 boinc boinc 798720 9. Feb 03:58 result.tar.gz
[2020-02-09 03:58:29] -rw-r--r--. 1 boinc boinc 30711 9. Feb 03:58 stderr.txt
[2020-02-09 03:58:29] HITS file was successfully produced:
[2020-02-09 03:58:29] -rw-------. 1 boinc boinc 9044916 9. Feb 03:56 shared/HITS.pool.root.1
[2020-02-09 03:58:29] *** Contents of shared directory: ***
[2020-02-09 03:58:29] insgesamt 366596
[2020-02-09 03:58:29] -rw-r--r--. 1 boinc boinc 8513 9. Feb 03:01 start_atlas.sh
[2020-02-09 03:58:29] -rw-r--r--. 1 boinc boinc 926 9. Feb 03:01 RTE.tar.gz
[2020-02-09 03:58:29] -rw-r--r--. 1 boinc boinc 275417 9. Feb 03:01 input.tar.gz
[2020-02-09 03:58:29] -rw-r--r--. 1 boinc boinc 365251149 9. Feb 03:01 ATLAS.root_0
[2020-02-09 03:58:29] -rw-------. 1 boinc boinc 9044916 9. Feb 03:56 HITS.pool.root.1
[2020-02-09 03:58:29] -rw-------. 1 boinc boinc 798720 9. Feb 03:58 result.tar.gz
03:58:31 (9399): run_atlas exited; CPU time 4398.270724
03:58:31 (9399): called boinc_finish(0)
</stderr_txt>
]]>
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