Name | D0eKDmr6jKzn7Olcko1bjSoqABFKDmABFKDmumdXDmgiFKDmvzo1Mo_0 |
Workunit | 2100596 |
Created | 5 Jul 2021, 20:15:14 UTC |
Sent | 5 Jul 2021, 20:15:45 UTC |
Report deadline | 12 Jul 2021, 20:15:45 UTC |
Received | 5 Jul 2021, 21:16:19 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 4357 |
Run time | 36 min 12 sec |
CPU time | 8 min 40 sec |
Validate state | Valid |
Credit | 15.28 |
Device peak FLOPS | 3.04 GFLOPS |
Application version | ATLAS Simulation v1.04 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 2.60 GB |
Peak swap size | 34.18 GB |
Peak disk usage | 79.34 MB |
<core_client_version>7.9.3</core_client_version> <![CDATA[ <stderr_txt> 16:17:31 (132697): wrapper (7.7.26015): starting 16:17:31 (132697): wrapper: running run_atlas (--nthreads 1) [2021-07-05 16:17:31] Arguments: --nthreads 1 [2021-07-05 16:17:31] Threads: 1 [2021-07-05 16:17:31] Checking for CVMFS [2021-07-05 16:17:31] Probing /cvmfs/atlas.cern.ch... OK [2021-07-05 16:17:33] Probing /cvmfs/atlas-condb.cern.ch... OK [2021-07-05 16:17:33] Running cvmfs_config stat atlas.cern.ch [2021-07-05 16:17:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2021-07-05 16:17:34] 2.9.0.0 132384 0 24828 87823 3 1 2878874 4194305 0 130560 0 0 0.000 529 365 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 0 [2021-07-05 16:17:34] CVMFS is ok [2021-07-05 16:17:34] Efficiency of ATLAS tasks can be improved by the following measure(s): [2021-07-05 16:17:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io. [2021-07-05 16:17:34] Small home clusters do not require a local http proxy but it is suggested if [2021-07-05 16:17:34] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks. [2021-07-05 16:17:34] Further information can be found at the LHC@home message board. [2021-07-05 16:17:34] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2021-07-05 16:17:34] Checking for singularity binary... [2021-07-05 16:17:34] Using singularity found in PATH at /usr/local/bin/singularity [2021-07-05 16:17:34] Running /usr/local/bin/singularity --version [2021-07-05 16:17:34] singularity version 3.7.2+10-ga969f0f8c [2021-07-05 16:17:34] Checking singularity works with /usr/local/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2021-07-05 16:17:37] E5-2670 [2021-07-05 16:17:37] Singularity works [2021-07-05 16:17:37] Starting ATLAS job with PandaID=5110115391 [2021-07-05 16:17:37] Running command: /usr/local/bin/singularity exec --pwd /var/lib/boinc-client/slots/49 -B /cvmfs,/var /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2021-07-05 16:54:07] *** The last 200 lines of the pilot log: *** [2021-07-05 16:54:07] "cpuTime": 0.26, [2021-07-05 16:54:07] "wallTime": 3.86 [2021-07-05 16:54:07] }, [2021-07-05 16:54:07] "transformSetup": { [2021-07-05 16:54:07] "cpuTime": 0.0, [2021-07-05 16:54:07] "wallTime": 0.02 [2021-07-05 16:54:07] }, [2021-07-05 16:54:07] "trfPredata": null, [2021-07-05 16:54:07] "wallTime": 1932.41 [2021-07-05 16:54:07] } [2021-07-05 16:54:07] } [2021-07-05 16:54:07] } [2021-07-05 16:54:07] 2021-07-05 20:53:53,009 | DEBUG | pilot.user.atlas.common | update_server | no need to update logstash for this job [2021-07-05 16:54:07] 2021-07-05 20:53:53,009 | INFO | pilot.control.job | send_state | pilot will not update the server (heartbeat message will be written to file) [2021-07-05 16:54:07] 2021-07-05 20:53:53,010 | INFO | pilot.control.job | send_state | job 5110115391 has finished - writing final server update [2021-07-05 16:54:07] 2021-07-05 20:53:53,010 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics_string | job definition core count: 1 [2021-07-05 16:54:07] 2021-07-05 20:53:53,011 | INFO | pilot.user.atlas.jobmetrics | get_job_metrics_string | will not add max space = -37117392 B to job metrics [2021-07-05 16:54:07] 2021-07-05 20:53:53,012 | DEBUG | pilot.api.analytics | get_fitted_data | removing tails from data to be fitted [2021-07-05 16:54:07] 2021-07-05 20:53:53,012 | INFO | pilot.api.analytics | get_fitted_data | fitting pss+swap vs Time [2021-07-05 16:54:07] 2021-07-05 20:53:53,013 | INFO | pilot.api.analytics | get_fitted_data | current memory leak: 947.52 B/s (using 26 data points, chi2=1377115) [2021-07-05 16:54:07] 2021-07-05 20:53:53,014 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics | job metrics="actualCoreCount=5 nEvents=2 dbTime=219.64 dbData=4274899 leak=947.52 chi2=1377115 event [2021-07-05 16:54:07] 2021-07-05 20:53:53,014 | INFO | pilot.control.job | get_data_structure | mean actualcorecount: 4.730769 [2021-07-05 16:54:07] 2021-07-05 20:53:53,014 | INFO | pilot.control.job | get_data_structure | total number of processed events: 2 (read) [2021-07-05 16:54:07] 2021-07-05 20:53:53,034 | INFO | pilot.util.container | execute | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2021-07-05 16:54:07] 2021-07-05 20:53:53,177 | INFO | pilot.user.atlas.utilities | get_memory_values | using path: /var/lib/boinc-client/slots/49/PanDA_Pilot-5110115391/memory_monitor_summary.json (trf n [2021-07-05 16:54:07] 2021-07-05 20:53:53,179 | DEBUG | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'Avg': {'nprocs': 4.939, 'nthreads': 5.787, 'pss': 1128133.0, 'rchar': 277211.0, [2021-07-05 16:54:07] 2021-07-05 20:53:53,179 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard info from prmon json [2021-07-05 16:54:07] 2021-07-05 20:53:53,179 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard memory fields from prmon json [2021-07-05 16:54:07] 2021-07-05 20:53:53,180 | INFO | pilot.util.timing | timing_report | .............................. [2021-07-05 16:54:07] 2021-07-05 20:53:53,180 | INFO | pilot.util.timing | timing_report | . Timing measurements: [2021-07-05 16:54:07] 2021-07-05 20:53:53,180 | INFO | pilot.util.timing | timing_report | . get job = 0 s [2021-07-05 16:54:07] 2021-07-05 20:53:53,180 | INFO | pilot.util.timing | timing_report | . initial setup = 2 s [2021-07-05 16:54:07] 2021-07-05 20:53:53,181 | INFO | pilot.util.timing | timing_report | . payload setup = 65 s [2021-07-05 16:54:07] 2021-07-05 20:53:53,181 | INFO | pilot.util.timing | timing_report | . total setup = 67 s [2021-07-05 16:54:07] 2021-07-05 20:53:53,181 | INFO | pilot.util.timing | timing_report | . stage-in = 0 s [2021-07-05 16:54:07] 2021-07-05 20:53:53,181 | INFO | pilot.util.timing | timing_report | . payload execution = 1994 s [2021-07-05 16:54:07] 2021-07-05 20:53:53,181 | INFO | pilot.util.timing | timing_report | . stage-out = 1 s [2021-07-05 16:54:07] 2021-07-05 20:53:53,181 | INFO | pilot.util.timing | timing_report | .............................. [2021-07-05 16:54:07] 2021-07-05 20:53:53,182 | DEBUG | pilot.control.job | send_state | is_harvester_mode(args) : False [2021-07-05 16:54:07] 2021-07-05 20:53:53,184 | DEBUG | pilot.control.job | write_heartbeat_to_file | heartbeat dictionary: {'jobId': '5110115391', 'state': 'finished', 'timestamp': '2021-07-05T16:53:53 [2021-07-05 16:54:07] 2021-07-05 20:53:53,185 | DEBUG | pilot.control.job | write_heartbeat_to_file | wrote heartbeat to file /var/lib/boinc-client/slots/49/heartbeat.json [2021-07-05 16:54:07] 2021-07-05 20:53:53,185 | DEBUG | pilot.control.job | queue_monitor | job 5110115391 was dequeued from the monitored payloads queue [2021-07-05 16:54:07] 2021-07-05 20:53:53,398 | DEBUG | pilot.control.job | queue_monitor | tmp job object deleted [2021-07-05 16:54:07] 2021-07-05 20:53:53,399 | INFO | pilot.control.job | make_job_report | [2021-07-05 16:54:07] 2021-07-05 20:53:53,399 | INFO | pilot.control.job | make_job_report | job summary report [2021-07-05 16:54:07] 2021-07-05 20:53:53,399 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2021-07-05 16:54:07] 2021-07-05 20:53:53,400 | INFO | pilot.control.job | make_job_report | PanDA job id: 5110115391 [2021-07-05 16:54:07] 2021-07-05 20:53:53,400 | INFO | pilot.control.job | make_job_report | task id: NULL [2021-07-05 16:54:07] 2021-07-05 20:53:53,400 | INFO | pilot.control.job | make_job_report | errors: (none) [2021-07-05 16:54:07] 2021-07-05 20:53:53,400 | INFO | pilot.control.job | make_job_report | status: LOG_TRANSFER = DONE [2021-07-05 16:54:07] 2021-07-05 20:53:53,400 | INFO | pilot.control.job | make_job_report | pilot state: finished [2021-07-05 16:54:07] 2021-07-05 20:53:53,401 | INFO | pilot.control.job | make_job_report | transexitcode: 0 [2021-07-05 16:54:07] 2021-07-05 20:53:53,401 | INFO | pilot.control.job | make_job_report | exeerrorcode: 0 [2021-07-05 16:54:07] 2021-07-05 20:53:53,401 | INFO | pilot.control.job | make_job_report | exeerrordiag: [2021-07-05 16:54:07] 2021-07-05 20:53:53,401 | INFO | pilot.control.job | make_job_report | exitcode: 0 [2021-07-05 16:54:07] 2021-07-05 20:53:53,401 | INFO | pilot.control.job | make_job_report | exitmsg: OK [2021-07-05 16:54:07] 2021-07-05 20:53:53,401 | INFO | pilot.control.job | make_job_report | cpuconsumptiontime: 635 s [2021-07-05 16:54:07] 2021-07-05 20:53:53,402 | INFO | pilot.control.job | make_job_report | nevents: 2 [2021-07-05 16:54:07] 2021-07-05 20:53:53,402 | INFO | pilot.control.job | make_job_report | neventsw: 0 [2021-07-05 16:54:07] 2021-07-05 20:53:53,402 | INFO | pilot.control.job | make_job_report | pid: 11547 [2021-07-05 16:54:07] 2021-07-05 20:53:53,402 | INFO | pilot.control.job | make_job_report | pgrp: 11547 [2021-07-05 16:54:07] 2021-07-05 20:53:53,402 | INFO | pilot.control.job | make_job_report | corecount: 1 [2021-07-05 16:54:07] 2021-07-05 20:53:53,402 | INFO | pilot.control.job | make_job_report | event service: False [2021-07-05 16:54:07] 2021-07-05 20:53:53,403 | INFO | pilot.control.job | make_job_report | sizes: {23249442: 3854711, 23249443: 3855988, 23249444: 3856101, 23249445: 3856267, 23249455: 385620 [2021-07-05 16:54:07] 2021-07-05 20:53:53,403 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2021-07-05 16:54:07] 2021-07-05 20:53:53,403 | INFO | pilot.control.job | make_job_report | [2021-07-05 16:54:07] 2021-07-05 20:53:53,403 | DEBUG | pilot.control.job | has_job_completed | ls -lF /var/lib/boinc-client/slots/49: [2021-07-05 16:54:07] [2021-07-05 16:54:07] 2021-07-05 20:53:53,403 | INFO | pilot.util.container | execute | executing command: ls -lF /var/lib/boinc-client/slots/49 [2021-07-05 16:54:07] 2021-07-05 20:53:53,487 | DEBUG | pilot.control.job | has_job_completed | total 43144 [2021-07-05 16:54:07] -rw------- 1 boinc boinc 209247 Jul 5 16:53 5abd35de-8681-4c95-b33b-68dac0c61fbe_26471.1.job.log [2021-07-05 16:54:07] -rw------- 1 boinc boinc 195500 Jul 5 16:53 5abd35de-8681-4c95-b33b-68dac0c61fbe_26471.1.job.log.tgz [2021-07-05 16:54:07] -rw------- 1 boinc boinc 1062736 Jul 5 16:19 agis_schedconf.cvmfs.json [2021-07-05 16:54:07] -rw-r--r-- 1 boinc boinc 0 Jul 5 16:17 boinc_lockfile [2021-07-05 16:54:07] -rw-r--r-- 1 boinc boinc 8192 Jul 5 16:53 boinc_mmap_file [2021-07-05 16:54:07] -rw-r--r-- 1 boinc boinc 534 Jul 5 16:53 boinc_task_state.xml [2021-07-05 16:54:07] -rw------- 1 boinc boinc 1963353 Jul 5 16:19 cric_ddmendpoints.json [2021-07-05 16:54:07] -rw------- 1 boinc boinc 130 Jul 5 16:17 D0eKDmr6jKzn7Olcko1bjSoqABFKDmABFKDmumdXDmgiFKDmvzo1Mo.diag [2021-07-05 16:54:07] -rw-r--r-- 1 boinc boinc 37965264 Jul 5 16:17 EVNT.04972714._000027.pool.root.1 [2021-07-05 16:54:07] -rw------- 1 boinc boinc 7508 Jul 5 16:53 heartbeat.json [2021-07-05 16:54:07] -rw-r--r-- 1 boinc boinc 6188 Jul 5 16:17 init_data.xml [2021-07-05 16:54:07] -rw-r--r-- 1 boinc boinc 344087 Jul 5 16:17 input.tar.gz [2021-07-05 16:54:07] -rw-r--r-- 1 boinc boinc 112 Jul 5 16:17 job.xml [2021-07-05 16:54:07] -rw------- 1 boinc boinc 1018 Jul 5 16:53 memory_monitor_summary.json [2021-07-05 16:54:07] -rw------- 1 boinc boinc 1750549 Jul 5 16:53 output.1.5abd35de-8681-4c95-b33b-68dac0c61fbe_26471.pool.root [2021-07-05 16:54:07] -rw------- 1 boinc boinc 536 Jul 5 16:53 output.list [2021-07-05 16:54:07] -rw-r--r-- 1 boinc boinc 2613 Jul 5 16:17 pandaJob.out [2021-07-05 16:54:07] drwxrwx--- 2 boinc boinc 4096 Jul 5 16:53 PanDA_Pilot-5110115391/ [2021-07-05 16:54:07] drwx------ 4 boinc boinc 4096 Jul 5 16:19 pilot2/ [2021-07-05 16:54:07] -rw-r--r-- 1 boinc boinc 334707 Jul 5 15:30 pilot2.tar.gz [2021-07-05 16:54:07] -rw------- 1 boinc boinc 189062 Jul 5 16:53 pilotlog.txt [2021-07-05 16:54:07] -rw-r--r-- 1 boinc boinc 3214 Jul 5 16:15 queuedata.json [2021-07-05 16:54:07] -rwxr-xr-x 1 boinc boinc 6966 Jul 5 16:17 run_atlas* [2021-07-05 16:54:07] -rwx------ 1 boinc boinc 20456 Jul 5 16:10 runpilot2-wrapper.sh* [2021-07-05 16:54:07] -rw-r--r-- 1 boinc boinc 407 Jul 5 16:17 runtime_log [2021-07-05 16:54:07] -rw-r--r-- 1 boinc boinc 5574 Jul 5 16:17 runtime_log.err [2021-07-05 16:54:07] drwxrwx--x 2 boinc boinc 4096 Jul 5 16:17 shared/ [2021-07-05 16:54:07] -rw-r--r-- 1 boinc boinc 16551 Jul 5 16:17 start_atlas.sh [2021-07-05 16:54:07] -rw-r--r-- 1 boinc boinc 2198 Jul 5 16:17 stderr.txt [2021-07-05 16:54:07] -rw-r--r-- 1 boinc boinc 107 Jul 5 16:17 wrapper_26015_x86_64-pc-linux-gnu [2021-07-05 16:54:07] -rw-r--r-- 1 boinc boinc 25 Jul 5 16:53 wrapper_checkpoint.txt [2021-07-05 16:54:07] 2021-07-05 20:53:53,488 | INFO | pilot.util.queuehandling | queue_report | queue jobs has 0 job(s) [2021-07-05 16:54:07] 2021-07-05 20:53:53,488 | INFO | pilot.util.queuehandling | queue_report | queue payloads has 0 job(s) [2021-07-05 16:54:07] 2021-07-05 20:53:53,488 | INFO | pilot.util.queuehandling | queue_report | queue data_in has 0 job(s) [2021-07-05 16:54:07] 2021-07-05 20:53:53,488 | INFO | pilot.util.queuehandling | queue_report | queue data_out has 0 job(s) [2021-07-05 16:54:07] 2021-07-05 20:53:53,488 | INFO | pilot.util.queuehandling | queue_report | queue current_data_in has 0 job(s) [2021-07-05 16:54:07] 2021-07-05 20:53:53,489 | INFO | pilot.util.queuehandling | queue_report | queue validated_jobs has 0 job(s) [2021-07-05 16:54:07] 2021-07-05 20:53:53,489 | INFO | pilot.util.queuehandling | queue_report | queue validated_payloads has 0 job(s) [2021-07-05 16:54:07] 2021-07-05 20:53:53,489 | INFO | pilot.util.queuehandling | queue_report | queue monitored_payloads has 0 job(s) [2021-07-05 16:54:07] 2021-07-05 20:53:53,489 | INFO | pilot.util.queuehandling | queue_report | queue finished_jobs has 0 job(s) [2021-07-05 16:54:07] 2021-07-05 20:53:53,489 | INFO | pilot.util.queuehandling | queue_report | queue finished_payloads has 0 job(s) [2021-07-05 16:54:07] 2021-07-05 20:53:53,489 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_in has 1 job(s) [2021-07-05 16:54:07] 2021-07-05 20:53:53,489 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_out has 0 job(s) [2021-07-05 16:54:07] 2021-07-05 20:53:53,490 | INFO | pilot.util.queuehandling | queue_report | queue failed_jobs has 0 job(s) [2021-07-05 16:54:07] 2021-07-05 20:53:53,490 | INFO | pilot.util.queuehandling | queue_report | queue failed_payloads has 0 job(s) [2021-07-05 16:54:07] 2021-07-05 20:53:53,490 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_in has 0 job(s) [2021-07-05 16:54:07] 2021-07-05 20:53:53,490 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_out has 0 job(s) [2021-07-05 16:54:07] 2021-07-05 20:53:53,490 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobs has 0 job(s) [2021-07-05 16:54:07] 2021-07-05 20:53:53,490 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s) [2021-07-05 16:54:07] 2021-07-05 20:53:53,490 | INFO | pilot.control.job | has_job_completed | job 5110115391 has completed (purged errors) [2021-07-05 16:54:07] 2021-07-05 20:53:53,491 | INFO | pilot.util.processes | cleanup | overall cleanup function is called [2021-07-05 16:54:07] 2021-07-05 20:53:53,496 | DEBUG | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc-client/slots/49/PanDA_Pilot-5110115391 [2021-07-05 16:54:07] 2021-07-05 20:53:54,505 | INFO | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [11547] [2021-07-05 16:54:07] 2021-07-05 20:53:54,506 | INFO | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 11547 [2021-07-05 16:54:07] 2021-07-05 20:53:54,507 | INFO | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes [2021-07-05 16:54:07] 2021-07-05 20:53:55,515 | INFO | pilot.util.processes | cleanup | collected zombie processes [2021-07-05 16:54:07] 2021-07-05 20:53:55,517 | INFO | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=11547 [2021-07-05 16:54:07] 2021-07-05 20:53:56,590 | INFO | pilot.util.processes | kill_processes | process IDs to be killed: [11547] (in reverse order) [2021-07-05 16:54:07] 2021-07-05 20:53:57,438 | WARNING | pilot.util.processes | kill_processes | found no corresponding commands to process id(s) [2021-07-05 16:54:07] 2021-07-05 20:53:57,441 | INFO | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs [2021-07-05 16:54:07] 2021-07-05 20:53:57,443 | DEBUG | pilot.util.queuehandling | purge_queue | queue purged [2021-07-05 16:54:07] 2021-07-05 20:53:57,443 | INFO | pilot.control.job | retrieve | ready for new job [2021-07-05 16:54:07] 2021-07-05 20:53:57,444 | INFO | root | retrieve | pilot has finished for previous job - re-establishing logging [2021-07-05 16:54:07] 2021-07-05 20:53:57,453 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2021-07-05 16:54:07] 2021-07-05 20:53:57,455 | INFO | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 2.12.2 (1) *** [2021-07-05 16:54:07] 2021-07-05 20:53:57,457 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2021-07-05 16:54:07] 2021-07-05 20:53:57,457 | INFO | pilot.util.auxiliary | pilot_version_banner | [2021-07-05 16:54:07] 2021-07-05 20:53:57,485 | INFO | pilot.util.auxiliary | display_architecture_info | architecture information: [2021-07-05 16:54:07] 2021-07-05 20:53:58,046 | INFO | pilot.util.auxiliary | display_architecture_info | [2021-07-05 16:54:07] LSB Version: :core-4.1-amd64:core-4.1-noarch [2021-07-05 16:54:07] Distributor ID: CentOS [2021-07-05 16:54:07] Description: CentOS Linux release 7.8.2003 (Core) [2021-07-05 16:54:07] Release: 7.8.2003 [2021-07-05 16:54:07] Codename: Core [2021-07-05 16:54:07] 2021-07-05 20:53:58,047 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2021-07-05 16:54:07] 2021-07-05 20:53:58,549 | DEBUG | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc-client/slots/49 [2021-07-05 16:54:07] 2021-07-05 20:53:58,616 | INFO | pilot.util.monitoring | check_local_space | sufficient remaining disk space (49764368384 B) [2021-07-05 16:54:07] 2021-07-05 20:53:58,617 | WARNING | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job [2021-07-05 16:54:07] 2021-07-05 20:53:58,617 | DEBUG | pilot.control.job | retrieve | will not set job_aborted yet [2021-07-05 16:54:07] 2021-07-05 20:53:58,617 | DEBUG | pilot.control.job | retrieve | [job] retrieve thread has finished [2021-07-05 16:54:07] 2021-07-05 20:53:58,618 | WARNING | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration [2021-07-05 16:54:07] 2021-07-05 20:53:58,618 | DEBUG | pilot.control.job | queue_monitor | will not set job_aborted yet [2021-07-05 16:54:07] 2021-07-05 20:53:58,619 | DEBUG | pilot.control.job | queue_monitor | [job] queue monitor thread has finished [2021-07-05 16:54:07] 2021-07-05 20:53:59,114 | INFO | pilot.control.monitor | control | [monitor] control thread has ended [2021-07-05 16:54:07] 2021-07-05 20:53:59,160 | DEBUG | pilot.control.data | control | data control ending since graceful_stop has been set [2021-07-05 16:54:07] 2021-07-05 20:53:59,161 | DEBUG | pilot.control.data | control | will not set job_aborted yet [2021-07-05 16:54:07] 2021-07-05 20:53:59,161 | DEBUG | pilot.control.data | control | [data] control thread has finished [2021-07-05 16:54:07] 2021-07-05 20:53:59,177 | DEBUG | pilot.control.payload | validate_pre | will not set job_aborted yet [2021-07-05 16:54:07] 2021-07-05 20:53:59,177 | INFO | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished [2021-07-05 16:54:07] 2021-07-05 20:53:59,346 | DEBUG | pilot.control.payload | validate_post | will not set job_aborted yet [2021-07-05 16:54:07] 2021-07-05 20:53:59,346 | INFO | pilot.control.payload | validate_post | [payload] validate_post thread has finished [2021-07-05 16:54:07] 2021-07-05 20:53:59,485 | DEBUG | pilot.control.payload | control | payload control ending since graceful_stop has been set [2021-07-05 16:54:07] 2021-07-05 20:53:59,486 | DEBUG | pilot.control.payload | control | will not set job_aborted yet [2021-07-05 16:54:07] 2021-07-05 20:53:59,487 | DEBUG | pilot.control.payload | control | [payload] control thread has finished [2021-07-05 16:54:07] 2021-07-05 20:53:59,724 | DEBUG | pilot.control.job | control | job control ending since graceful_stop has been set [2021-07-05 16:54:07] 2021-07-05 20:53:59,724 | DEBUG | pilot.control.job | control | will not set job_aborted yet [2021-07-05 16:54:07] 2021-07-05 20:53:59,725 | DEBUG | pilot.control.job | control | [job] control thread has finished [2021-07-05 16:54:07] 2021-07-05 20:53:59,802 | DEBUG | pilot.control.payload | execute_payloads | will not set job_aborted yet [2021-07-05 16:54:07] 2021-07-05 20:53:59,802 | INFO | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished [2021-07-05 16:54:07] 2021-07-05 20:53:59,997 | DEBUG | pilot.control.payload | failed_post | will not set job_aborted yet [2021-07-05 16:54:07] 2021-07-05 20:53:59,998 | INFO | pilot.control.payload | failed_post | [payload] failed_post thread has finished [2021-07-05 16:54:07] 2021-07-05 20:54:00,040 | WARNING | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration [2021-07-05 16:54:07] 2021-07-05 20:54:00,063 | DEBUG | pilot.control.job | create_data_payload | will not set job_aborted yet [2021-07-05 16:54:07] 2021-07-05 20:54:00,063 | DEBUG | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished [2021-07-05 16:54:07] 2021-07-05 20:54:00,063 | DEBUG | pilot.control.job | validate | will not set job_aborted yet [2021-07-05 16:54:07] 2021-07-05 20:54:00,064 | DEBUG | pilot.control.data | copytool_in | will not set job_aborted yet [2021-07-05 16:54:07] 2021-07-05 20:54:00,064 | DEBUG | pilot.control.job | validate | [job] validate thread has finished [2021-07-05 16:54:07] 2021-07-05 20:54:00,064 | DEBUG | pilot.control.data | copytool_in | [data] copytool_in thread has finished [2021-07-05 16:54:07] 2021-07-05 20:54:00,826 | WARNING | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration [2021-07-05 16:54:07] 2021-07-05 20:54:01,040 | DEBUG | pilot.control.data | copytool_out | will not set job_aborted yet [2021-07-05 16:54:07] 2021-07-05 20:54:01,041 | DEBUG | pilot.control.data | copytool_out | [data] copytool_out thread has finished [2021-07-05 16:54:07] 2021-07-05 20:54:01,673 | WARNING | pilot.control.job | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 78 s) [2021-07-05 16:54:07] 2021-07-05 20:54:01,673 | DEBUG | pilot.control.job | job_monitor | will not set job_aborted yet [2021-07-05 16:54:07] 2021-07-05 20:54:01,673 | DEBUG | pilot.control.job | job_monitor | [job] job monitor thread has finished [2021-07-05 16:54:07] 2021-07-05 20:54:03,840 | DEBUG | pilot.util.processes | threads_aborted | aborting since the last relevant thread is about to finish [2021-07-05 16:54:07] 2021-07-05 20:54:03,843 | DEBUG | pilot.control.data | queue_monitoring | will proceed to set job_aborted [2021-07-05 16:54:07] 2021-07-05 20:54:03,844 | DEBUG | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished [2021-07-05 16:54:07] 2021-07-05 20:54:04,490 | INFO | pilot.workflow.generic | run | end of generic workflow (traces error code: 0) [2021-07-05 16:54:07] 2021-07-05 20:54:04,497 | INFO | root | wrap_up | traces error code: 0 [2021-07-05 16:54:07] 2021-07-05 20:54:04,498 | INFO | root | wrap_up | pilot has finished [2021-07-05 16:54:07] 2021-07-05 20:54:05,174 [wrapper] ==== pilot stdout END ==== [2021-07-05 16:54:07] 2021-07-05 20:54:05,258 [wrapper] ==== wrapper stdout RESUME ==== [2021-07-05 16:54:07] 2021-07-05 20:54:05,366 [wrapper] Pilot exit status: 0 [2021-07-05 16:54:07] 2021-07-05 20:54:05,728 [wrapper] pandaids: 5110115391 [2021-07-05 16:54:07] 2021-07-05 20:54:05,942 [wrapper] apfmon messages muted [2021-07-05 16:54:07] 2021-07-05 20:54:06,065 [wrapper] Test setup, not cleaning [2021-07-05 16:54:07] 2021-07-05 20:54:06,163 [wrapper] ==== wrapper stdout END ==== [2021-07-05 16:54:07] 2021-07-05 20:54:06,265 [wrapper] ==== wrapper stderr END ==== [2021-07-05 16:54:07] 2021-07-05 20:54:06,452 [wrapper] wrapperexiting ec=0, duration=2187 [2021-07-05 16:54:07] 2021-07-05 20:54:06,541 [wrapper] apfmon messages muted [2021-07-05 16:54:07] *** Error codes and diagnostics *** [2021-07-05 16:54:07] "exeErrorCode": 0, [2021-07-05 16:54:07] "exeErrorDiag": "", [2021-07-05 16:54:07] "pilotErrorCode": 0, [2021-07-05 16:54:07] "pilotErrorDiag": "", [2021-07-05 16:54:07] *** Listing of results directory *** [2021-07-05 16:54:07] total 45140 [2021-07-05 16:54:07] -rw-r--r-- 1 boinc boinc 334707 Jul 5 15:30 pilot2.tar.gz [2021-07-05 16:54:07] -rwx------ 1 boinc boinc 20456 Jul 5 16:10 runpilot2-wrapper.sh [2021-07-05 16:54:07] -rw-r--r-- 1 boinc boinc 3214 Jul 5 16:15 queuedata.json [2021-07-05 16:54:07] -rw-r--r-- 1 boinc boinc 107 Jul 5 16:17 wrapper_26015_x86_64-pc-linux-gnu [2021-07-05 16:54:07] -rwxr-xr-x 1 boinc boinc 6966 Jul 5 16:17 run_atlas [2021-07-05 16:54:07] -rw-r--r-- 1 boinc boinc 112 Jul 5 16:17 job.xml [2021-07-05 16:54:07] drwxrwx--x 2 boinc boinc 4096 Jul 5 16:17 shared [2021-07-05 16:54:07] -rw-r--r-- 1 boinc boinc 6188 Jul 5 16:17 init_data.xml [2021-07-05 16:54:07] -rw-r--r-- 1 boinc boinc 0 Jul 5 16:17 boinc_lockfile [2021-07-05 16:54:07] -rw-r--r-- 1 boinc boinc 16551 Jul 5 16:17 start_atlas.sh [2021-07-05 16:54:07] -rw-r--r-- 1 boinc boinc 344087 Jul 5 16:17 input.tar.gz [2021-07-05 16:54:07] -rw-r--r-- 1 boinc boinc 37965264 Jul 5 16:17 EVNT.04972714._000027.pool.root.1 [2021-07-05 16:54:07] -rw-r--r-- 1 boinc boinc 2613 Jul 5 16:17 pandaJob.out [2021-07-05 16:54:07] -rw------- 1 boinc boinc 1062736 Jul 5 16:19 agis_schedconf.cvmfs.json [2021-07-05 16:54:07] -rw------- 1 boinc boinc 1963353 Jul 5 16:19 cric_ddmendpoints.json [2021-07-05 16:54:07] drwx------ 4 boinc boinc 4096 Jul 5 16:19 pilot2 [2021-07-05 16:54:07] -rw------- 1 boinc boinc 1750549 Jul 5 16:53 output.1.5abd35de-8681-4c95-b33b-68dac0c61fbe_26471.pool.root [2021-07-05 16:54:07] -rw-r--r-- 1 boinc boinc 534 Jul 5 16:53 boinc_task_state.xml [2021-07-05 16:54:07] -rw------- 1 boinc boinc 1018 Jul 5 16:53 memory_monitor_summary.json [2021-07-05 16:54:07] -rw-r--r-- 1 boinc boinc 25 Jul 5 16:53 wrapper_checkpoint.txt [2021-07-05 16:54:07] -rw-r--r-- 1 boinc boinc 8192 Jul 5 16:53 boinc_mmap_file [2021-07-05 16:54:07] -rw------- 1 boinc boinc 195500 Jul 5 16:53 5abd35de-8681-4c95-b33b-68dac0c61fbe_26471.1.job.log.tgz [2021-07-05 16:54:07] -rw------- 1 boinc boinc 7508 Jul 5 16:53 heartbeat.json [2021-07-05 16:54:07] -rw------- 1 boinc boinc 7363 Jul 5 16:54 pilotlog.txt [2021-07-05 16:54:07] -rw------- 1 boinc boinc 223918 Jul 5 16:54 5abd35de-8681-4c95-b33b-68dac0c61fbe_26471.1.job.log [2021-07-05 16:54:07] -rw------- 1 boinc boinc 536 Jul 5 16:54 output.list [2021-07-05 16:54:07] -rw-r--r-- 1 boinc boinc 748 Jul 5 16:54 runtime_log [2021-07-05 16:54:07] -rw------- 1 boinc boinc 2191360 Jul 5 16:54 result.tar.gz [2021-07-05 16:54:07] -rw-r--r-- 1 boinc boinc 9429 Jul 5 16:54 runtime_log.err [2021-07-05 16:54:07] -rw------- 1 boinc boinc 563 Jul 5 16:54 D0eKDmr6jKzn7Olcko1bjSoqABFKDmABFKDmumdXDmgiFKDmvzo1Mo.diag [2021-07-05 16:54:07] -rw-r--r-- 1 boinc boinc 29496 Jul 5 16:54 stderr.txt [2021-07-05 16:54:07] HITS file was successfully produced: [2021-07-05 16:54:07] -rw------- 1 boinc boinc 1750549 Jul 5 16:53 shared/HITS.pool.root.1 [2021-07-05 16:54:07] *** Contents of shared directory: *** [2021-07-05 16:54:07] total 41288 [2021-07-05 16:54:07] -rw-r--r-- 1 boinc boinc 16551 Jul 5 16:17 start_atlas.sh [2021-07-05 16:54:07] -rw-r--r-- 1 boinc boinc 344087 Jul 5 16:17 input.tar.gz [2021-07-05 16:54:07] -rw-r--r-- 1 boinc boinc 37965264 Jul 5 16:17 ATLAS.root_0 [2021-07-05 16:54:07] -rw------- 1 boinc boinc 1750549 Jul 5 16:53 HITS.pool.root.1 [2021-07-05 16:54:07] -rw------- 1 boinc boinc 2191360 Jul 5 16:54 result.tar.gz 16:54:08 (132697): run_atlas exited; CPU time 553.791185 16:54:08 (132697): called boinc_finish(0) </stderr_txt> ]]>
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