Name | 7irNDmwaGLzn7Olcko1bjSoqABFKDmABFKDmumdXDm1jFKDmL7Samm_0 |
Workunit | 2101323 |
Created | 7 Jul 2021, 6:52:18 UTC |
Sent | 7 Jul 2021, 6:56:14 UTC |
Report deadline | 14 Jul 2021, 6:56:14 UTC |
Received | 7 Jul 2021, 8:26:52 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 4357 |
Run time | 45 min 59 sec |
CPU time | 15 min 0 sec |
Validate state | Valid |
Credit | 19.41 |
Device peak FLOPS | 3.04 GFLOPS |
Application version | ATLAS Simulation v1.04 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.44 GB |
Peak swap size | 2.12 GB |
Peak disk usage | 79.74 MB |
<core_client_version>7.9.3</core_client_version> <![CDATA[ <stderr_txt> 02:58:03 (5286): wrapper (7.7.26015): starting 02:58:03 (5286): wrapper: running run_atlas (--nthreads 1) [2021-07-07 02:58:03] Arguments: --nthreads 1 [2021-07-07 02:58:03] Threads: 1 [2021-07-07 02:58:03] Checking for CVMFS [2021-07-07 02:58:05] Probing /cvmfs/atlas.cern.ch... OK [2021-07-07 02:58:06] Probing /cvmfs/atlas-condb.cern.ch... OK [2021-07-07 02:58:06] Running cvmfs_config stat atlas.cern.ch [2021-07-07 02:58:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2021-07-07 02:58:09] 2.9.0.0 5850 0 24552 87908 3 1 3665040 4194305 0 130560 0 0 0.000 528 2163 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 0 [2021-07-07 02:58:09] CVMFS is ok [2021-07-07 02:58:09] Efficiency of ATLAS tasks can be improved by the following measure(s): [2021-07-07 02:58:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io. [2021-07-07 02:58:09] Small home clusters do not require a local http proxy but it is suggested if [2021-07-07 02:58:09] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks. [2021-07-07 02:58:09] Further information can be found at the LHC@home message board. [2021-07-07 02:58:09] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2021-07-07 02:58:09] Checking for singularity binary... [2021-07-07 02:58:09] Using singularity found in PATH at /usr/local/bin/singularity [2021-07-07 02:58:09] Running /usr/local/bin/singularity --version [2021-07-07 02:58:10] singularity version 3.7.2+10-ga969f0f8c [2021-07-07 02:58:10] Checking singularity works with /usr/local/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2021-07-07 02:58:11] E5-2670 [2021-07-07 02:58:11] Singularity works [2021-07-07 02:58:11] Starting ATLAS job with PandaID=5111684807 [2021-07-07 02:58:11] Running command: /usr/local/bin/singularity exec --pwd /var/lib/boinc-client/slots/31 -B /cvmfs,/var /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2021-07-07 03:44:14] *** The last 200 lines of the pilot log: *** [2021-07-07 03:44:14] "cpuEfficiency": 0.3342, [2021-07-07 03:44:14] "cpuPWEfficiency": 0.3342, [2021-07-07 03:44:14] "cpuTime": 7, [2021-07-07 03:44:14] "cpuTimeTotal": 872, [2021-07-07 03:44:14] "externalCpuTime": 25, [2021-07-07 03:44:14] "processedEvents": 2, [2021-07-07 03:44:14] "trfPredata": null, [2021-07-07 03:44:14] "wallTime": 2558 [2021-07-07 03:44:14] } [2021-07-07 03:44:14] } [2021-07-07 03:44:14] } [2021-07-07 03:44:14] 2021-07-07 07:43:11,198 | DEBUG | pilot.user.atlas.common | update_server | no need to update logstash for this job [2021-07-07 03:44:14] 2021-07-07 07:43:11,199 | INFO | pilot.control.job | send_state | pilot will not update the server (heartbeat message will be written to file) [2021-07-07 03:44:14] 2021-07-07 07:43:11,199 | INFO | pilot.control.job | send_state | job 5111684807 has finished - writing final server update [2021-07-07 03:44:14] 2021-07-07 07:43:11,199 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics_string | job definition core count: 1 [2021-07-07 03:44:14] 2021-07-07 07:43:11,200 | INFO | pilot.user.atlas.jobmetrics | get_job_metrics_string | will not add max space = -36500816 B to job metrics [2021-07-07 03:44:14] 2021-07-07 07:43:11,201 | DEBUG | pilot.api.analytics | get_fitted_data | removing tails from data to be fitted [2021-07-07 03:44:14] 2021-07-07 07:43:11,201 | INFO | pilot.api.analytics | get_fitted_data | fitting pss+swap vs Time [2021-07-07 03:44:14] 2021-07-07 07:43:11,202 | INFO | pilot.api.analytics | get_fitted_data | current memory leak: 403.41 B/s (using 36 data points, chi2=645782) [2021-07-07 03:44:14] 2021-07-07 07:43:11,202 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics | job metrics="actualCoreCount=1 nEvents=2 dbTime=249.72 dbData=4274626 leak=403.41 chi2=645782 eventn [2021-07-07 03:44:14] 2021-07-07 07:43:11,202 | INFO | pilot.control.job | get_data_structure | mean actualcorecount: 4.342857 [2021-07-07 03:44:14] 2021-07-07 07:43:11,203 | INFO | pilot.control.job | get_data_structure | total number of processed events: 2 (read) [2021-07-07 03:44:14] 2021-07-07 07:43:11,226 | INFO | pilot.util.container | execute | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2021-07-07 03:44:14] 2021-07-07 07:43:11,294 | INFO | pilot.user.atlas.utilities | get_memory_values | using path: /var/lib/boinc-client/slots/31/PanDA_Pilot-5111684807/memory_monitor_summary.json (trf n [2021-07-07 03:44:14] 2021-07-07 07:43:11,296 | DEBUG | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'Avg': {'nprocs': 4.976, 'nthreads': 5.93, 'pss': 1047933.0, 'rchar': 249772.0, [2021-07-07 03:44:14] 2021-07-07 07:43:11,296 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard info from prmon json [2021-07-07 03:44:14] 2021-07-07 07:43:11,297 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard memory fields from prmon json [2021-07-07 03:44:14] 2021-07-07 07:43:11,297 | INFO | pilot.util.timing | timing_report | .............................. [2021-07-07 03:44:14] 2021-07-07 07:43:11,297 | INFO | pilot.util.timing | timing_report | . Timing measurements: [2021-07-07 03:44:14] 2021-07-07 07:43:11,297 | INFO | pilot.util.timing | timing_report | . get job = 0 s [2021-07-07 03:44:14] 2021-07-07 07:43:11,297 | INFO | pilot.util.timing | timing_report | . initial setup = 1 s [2021-07-07 03:44:14] 2021-07-07 07:43:11,297 | INFO | pilot.util.timing | timing_report | . payload setup = 26 s [2021-07-07 03:44:14] 2021-07-07 07:43:11,297 | INFO | pilot.util.timing | timing_report | . total setup = 27 s [2021-07-07 03:44:14] 2021-07-07 07:43:11,298 | INFO | pilot.util.timing | timing_report | . stage-in = 0 s [2021-07-07 03:44:14] 2021-07-07 07:43:11,298 | INFO | pilot.util.timing | timing_report | . payload execution = 2596 s [2021-07-07 03:44:14] 2021-07-07 07:43:11,298 | INFO | pilot.util.timing | timing_report | . stage-out = 1 s [2021-07-07 03:44:14] 2021-07-07 07:43:11,298 | INFO | pilot.util.timing | timing_report | .............................. [2021-07-07 03:44:14] 2021-07-07 07:43:11,298 | DEBUG | pilot.control.job | send_state | is_harvester_mode(args) : False [2021-07-07 03:44:14] 2021-07-07 07:43:11,299 | DEBUG | pilot.control.job | write_heartbeat_to_file | heartbeat dictionary: {'jobId': '5111684807', 'state': 'finished', 'timestamp': '2021-07-07T03:43:11 [2021-07-07 03:44:14] 2021-07-07 07:43:11,299 | DEBUG | pilot.control.job | write_heartbeat_to_file | wrote heartbeat to file /var/lib/boinc-client/slots/31/heartbeat.json [2021-07-07 03:44:14] 2021-07-07 07:43:11,300 | DEBUG | pilot.control.job | queue_monitor | job 5111684807 was dequeued from the monitored payloads queue [2021-07-07 03:44:14] 2021-07-07 07:43:11,460 | DEBUG | pilot.control.job | queue_monitor | tmp job object deleted [2021-07-07 03:44:14] 2021-07-07 07:43:11,460 | INFO | pilot.control.job | make_job_report | [2021-07-07 03:44:14] 2021-07-07 07:43:11,460 | INFO | pilot.control.job | make_job_report | job summary report [2021-07-07 03:44:14] 2021-07-07 07:43:11,461 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2021-07-07 03:44:14] 2021-07-07 07:43:11,461 | INFO | pilot.control.job | make_job_report | PanDA job id: 5111684807 [2021-07-07 03:44:14] 2021-07-07 07:43:11,461 | INFO | pilot.control.job | make_job_report | task id: NULL [2021-07-07 03:44:14] 2021-07-07 07:43:11,461 | INFO | pilot.control.job | make_job_report | errors: (none) [2021-07-07 03:44:14] 2021-07-07 07:43:11,461 | INFO | pilot.control.job | make_job_report | status: LOG_TRANSFER = DONE [2021-07-07 03:44:14] 2021-07-07 07:43:11,461 | INFO | pilot.control.job | make_job_report | pilot state: finished [2021-07-07 03:44:14] 2021-07-07 07:43:11,461 | INFO | pilot.control.job | make_job_report | transexitcode: 0 [2021-07-07 03:44:14] 2021-07-07 07:43:11,461 | INFO | pilot.control.job | make_job_report | exeerrorcode: 0 [2021-07-07 03:44:14] 2021-07-07 07:43:11,462 | INFO | pilot.control.job | make_job_report | exeerrordiag: [2021-07-07 03:44:14] 2021-07-07 07:43:11,462 | INFO | pilot.control.job | make_job_report | exitcode: 0 [2021-07-07 03:44:14] 2021-07-07 07:43:11,462 | INFO | pilot.control.job | make_job_report | exitmsg: OK [2021-07-07 03:44:14] 2021-07-07 07:43:11,462 | INFO | pilot.control.job | make_job_report | cpuconsumptiontime: 960 s [2021-07-07 03:44:14] 2021-07-07 07:43:11,462 | INFO | pilot.control.job | make_job_report | nevents: 2 [2021-07-07 03:44:14] 2021-07-07 07:43:11,462 | INFO | pilot.control.job | make_job_report | neventsw: 0 [2021-07-07 03:44:14] 2021-07-07 07:43:11,462 | INFO | pilot.control.job | make_job_report | pid: 35118 [2021-07-07 03:44:14] 2021-07-07 07:43:11,462 | INFO | pilot.control.job | make_job_report | pgrp: 35118 [2021-07-07 03:44:14] 2021-07-07 07:43:11,463 | INFO | pilot.control.job | make_job_report | corecount: 1 [2021-07-07 03:44:14] 2021-07-07 07:43:11,463 | INFO | pilot.control.job | make_job_report | event service: False [2021-07-07 03:44:14] 2021-07-07 07:43:11,463 | INFO | pilot.control.job | make_job_report | sizes: {23374249: 3855845, 23374250: 3856014, 23374251: 3856122, 23376877: 3877661, 23376878: 387766 [2021-07-07 03:44:14] 2021-07-07 07:43:11,463 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2021-07-07 03:44:14] 2021-07-07 07:43:11,463 | INFO | pilot.control.job | make_job_report | [2021-07-07 03:44:14] 2021-07-07 07:43:11,463 | DEBUG | pilot.control.job | has_job_completed | ls -lF /var/lib/boinc-client/slots/31: [2021-07-07 03:44:14] [2021-07-07 03:44:14] 2021-07-07 07:43:11,463 | INFO | pilot.util.container | execute | executing command: ls -lF /var/lib/boinc-client/slots/31 [2021-07-07 03:44:14] 2021-07-07 07:43:11,524 | DEBUG | pilot.control.job | has_job_completed | total 42728 [2021-07-07 03:44:14] -rw------- 1 boinc boinc 130 Jul 7 02:58 7irNDmwaGLzn7Olcko1bjSoqABFKDmABFKDmumdXDm1jFKDmL7Samm.diag [2021-07-07 03:44:14] -rw------- 1 boinc boinc 309498 Jul 7 03:43 8ccd5fb7-e4c1-4cd3-ae49-1c65e529de7f_16340.1.job.log [2021-07-07 03:44:14] -rw------- 1 boinc boinc 185361 Jul 7 03:43 8ccd5fb7-e4c1-4cd3-ae49-1c65e529de7f_16340.1.job.log.tgz [2021-07-07 03:44:14] -rw------- 1 boinc boinc 1061301 Jul 7 02:59 agis_schedconf.cvmfs.json [2021-07-07 03:44:14] -rw-r--r-- 1 boinc boinc 0 Jul 7 02:58 boinc_lockfile [2021-07-07 03:44:14] -rw-r--r-- 1 boinc boinc 8192 Jul 7 03:43 boinc_mmap_file [2021-07-07 03:44:14] -rw-r--r-- 1 boinc boinc 533 Jul 7 03:43 boinc_task_state.xml [2021-07-07 03:44:14] -rw------- 1 boinc boinc 1963337 Jul 7 02:59 cric_ddmendpoints.json [2021-07-07 03:44:14] -rw-r--r-- 1 boinc boinc 37727106 Jul 7 02:58 EVNT.04972714._000037.pool.root.1 [2021-07-07 03:44:14] -rw------- 1 boinc boinc 6607 Jul 7 03:43 heartbeat.json [2021-07-07 03:44:14] -rw-r--r-- 1 boinc boinc 6188 Jul 7 02:58 init_data.xml [2021-07-07 03:44:14] -rw-r--r-- 1 boinc boinc 345318 Jul 7 02:58 input.tar.gz [2021-07-07 03:44:14] -rw-r--r-- 1 boinc boinc 112 Jul 7 02:58 job.xml [2021-07-07 03:44:14] -rw------- 1 boinc boinc 1020 Jul 7 03:43 memory_monitor_summary.json [2021-07-07 03:44:14] -rw------- 1 boinc boinc 1374670 Jul 7 03:42 output.1.8ccd5fb7-e4c1-4cd3-ae49-1c65e529de7f_16340.pool.root [2021-07-07 03:44:14] -rw------- 1 boinc boinc 536 Jul 7 03:43 output.list [2021-07-07 03:44:14] -rw-r--r-- 1 boinc boinc 2599 Jul 7 02:58 pandaJob.out [2021-07-07 03:44:14] drwxrwx--- 2 boinc boinc 4096 Jul 7 03:43 PanDA_Pilot-5111684807/ [2021-07-07 03:44:14] drwx------ 4 boinc boinc 4096 Jul 7 02:59 pilot2/ [2021-07-07 03:44:14] -rw-r--r-- 1 boinc boinc 335719 Jul 1 21:06 pilot2.tar.gz [2021-07-07 03:44:14] -rw------- 1 boinc boinc 289126 Jul 7 03:43 pilotlog.txt [2021-07-07 03:44:14] -rw-r--r-- 1 boinc boinc 3214 Jul 7 02:52 queuedata.json [2021-07-07 03:44:14] -rwxr-xr-x 1 boinc boinc 6966 Jul 7 02:58 run_atlas* [2021-07-07 03:44:14] -rwx------ 1 boinc boinc 20316 Jul 7 02:52 runpilot2-wrapper.sh* [2021-07-07 03:44:14] -rw-r--r-- 1 boinc boinc 407 Jul 7 02:58 runtime_log [2021-07-07 03:44:14] -rw-r--r-- 1 boinc boinc 5579 Jul 7 02:58 runtime_log.err [2021-07-07 03:44:14] drwxrwx--x 2 boinc boinc 4096 Jul 7 02:58 shared/ [2021-07-07 03:44:14] -rw-r--r-- 1 boinc boinc 16569 Jul 7 02:58 start_atlas.sh [2021-07-07 03:44:14] -rw-r--r-- 1 boinc boinc 2193 Jul 7 02:58 stderr.txt [2021-07-07 03:44:14] -rw-r--r-- 1 boinc boinc 107 Jul 7 02:58 wrapper_26015_x86_64-pc-linux-gnu [2021-07-07 03:44:14] -rw-r--r-- 1 boinc boinc 25 Jul 7 03:43 wrapper_checkpoint.txt [2021-07-07 03:44:14] 2021-07-07 07:43:11,524 | INFO | pilot.util.queuehandling | queue_report | queue jobs has 0 job(s) [2021-07-07 03:44:14] 2021-07-07 07:43:11,525 | INFO | pilot.util.queuehandling | queue_report | queue payloads has 0 job(s) [2021-07-07 03:44:14] 2021-07-07 07:43:11,525 | INFO | pilot.util.queuehandling | queue_report | queue data_in has 0 job(s) [2021-07-07 03:44:14] 2021-07-07 07:43:11,525 | INFO | pilot.util.queuehandling | queue_report | queue data_out has 0 job(s) [2021-07-07 03:44:14] 2021-07-07 07:43:11,525 | INFO | pilot.util.queuehandling | queue_report | queue current_data_in has 0 job(s) [2021-07-07 03:44:14] 2021-07-07 07:43:11,525 | INFO | pilot.util.queuehandling | queue_report | queue validated_jobs has 0 job(s) [2021-07-07 03:44:14] 2021-07-07 07:43:11,525 | INFO | pilot.util.queuehandling | queue_report | queue validated_payloads has 0 job(s) [2021-07-07 03:44:14] 2021-07-07 07:43:11,525 | INFO | pilot.util.queuehandling | queue_report | queue monitored_payloads has 0 job(s) [2021-07-07 03:44:14] 2021-07-07 07:43:11,525 | INFO | pilot.util.queuehandling | queue_report | queue finished_jobs has 0 job(s) [2021-07-07 03:44:14] 2021-07-07 07:43:11,525 | INFO | pilot.util.queuehandling | queue_report | queue finished_payloads has 0 job(s) [2021-07-07 03:44:14] 2021-07-07 07:43:11,526 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_in has 1 job(s) [2021-07-07 03:44:14] 2021-07-07 07:43:11,526 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_out has 0 job(s) [2021-07-07 03:44:14] 2021-07-07 07:43:11,526 | INFO | pilot.util.queuehandling | queue_report | queue failed_jobs has 0 job(s) [2021-07-07 03:44:14] 2021-07-07 07:43:11,526 | INFO | pilot.util.queuehandling | queue_report | queue failed_payloads has 0 job(s) [2021-07-07 03:44:14] 2021-07-07 07:43:11,526 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_in has 0 job(s) [2021-07-07 03:44:14] 2021-07-07 07:43:11,526 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_out has 0 job(s) [2021-07-07 03:44:14] 2021-07-07 07:43:11,526 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobs has 0 job(s) [2021-07-07 03:44:14] 2021-07-07 07:43:11,526 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s) [2021-07-07 03:44:14] 2021-07-07 07:43:11,527 | INFO | pilot.control.job | has_job_completed | job 5111684807 has completed (purged errors) [2021-07-07 03:44:14] 2021-07-07 07:43:11,527 | INFO | pilot.util.processes | cleanup | overall cleanup function is called [2021-07-07 03:44:14] 2021-07-07 07:43:11,531 | DEBUG | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc-client/slots/31/PanDA_Pilot-5111684807 [2021-07-07 03:44:14] 2021-07-07 07:43:12,536 | INFO | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [35118] [2021-07-07 03:44:14] 2021-07-07 07:43:12,536 | INFO | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 35118 [2021-07-07 03:44:14] 2021-07-07 07:43:12,537 | INFO | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes [2021-07-07 03:44:14] 2021-07-07 07:43:13,540 | INFO | pilot.util.processes | cleanup | collected zombie processes [2021-07-07 03:44:14] 2021-07-07 07:43:13,541 | INFO | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=35118 [2021-07-07 03:44:14] 2021-07-07 07:43:13,712 | INFO | pilot.util.processes | kill_processes | process IDs to be killed: [35118] (in reverse order) [2021-07-07 03:44:14] 2021-07-07 07:43:13,917 | WARNING | pilot.util.processes | kill_processes | found no corresponding commands to process id(s) [2021-07-07 03:44:14] 2021-07-07 07:43:13,917 | INFO | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs [2021-07-07 03:44:14] 2021-07-07 07:43:13,917 | DEBUG | pilot.util.queuehandling | purge_queue | queue purged [2021-07-07 03:44:14] 2021-07-07 07:43:13,918 | INFO | pilot.control.job | retrieve | ready for new job [2021-07-07 03:44:14] 2021-07-07 07:43:13,918 | INFO | root | retrieve | pilot has finished for previous job - re-establishing logging [2021-07-07 03:44:14] 2021-07-07 07:43:13,919 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2021-07-07 03:44:14] 2021-07-07 07:43:13,919 | INFO | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 2.12.3 (2) *** [2021-07-07 03:44:14] 2021-07-07 07:43:13,919 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2021-07-07 03:44:14] 2021-07-07 07:43:13,920 | INFO | pilot.util.auxiliary | pilot_version_banner | [2021-07-07 03:44:14] 2021-07-07 07:43:13,938 | INFO | pilot.util.auxiliary | display_architecture_info | architecture information: [2021-07-07 03:44:14] 2021-07-07 07:43:14,319 | INFO | pilot.util.auxiliary | display_architecture_info | [2021-07-07 03:44:14] LSB Version: :core-4.1-amd64:core-4.1-noarch [2021-07-07 03:44:14] Distributor ID: CentOS [2021-07-07 03:44:14] Description: CentOS Linux release 7.8.2003 (Core) [2021-07-07 03:44:14] Release: 7.8.2003 [2021-07-07 03:44:14] Codename: Core [2021-07-07 03:44:14] 2021-07-07 07:43:14,319 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2021-07-07 03:44:14] 2021-07-07 07:43:14,820 | DEBUG | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc-client/slots/31 [2021-07-07 03:44:14] 2021-07-07 07:43:14,890 | INFO | pilot.util.monitoring | check_local_space | sufficient remaining disk space (50167021568 B) [2021-07-07 03:44:14] 2021-07-07 07:43:14,890 | WARNING | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job [2021-07-07 03:44:14] 2021-07-07 07:43:14,891 | DEBUG | pilot.control.job | retrieve | will not set job_aborted yet [2021-07-07 03:44:14] 2021-07-07 07:43:14,891 | DEBUG | pilot.control.job | retrieve | [job] retrieve thread has finished [2021-07-07 03:44:14] 2021-07-07 07:43:14,891 | WARNING | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration [2021-07-07 03:44:14] 2021-07-07 07:43:14,894 | WARNING | pilot.control.monitor | control | aborting monitor loop since graceful_stop has been set [2021-07-07 03:44:14] 2021-07-07 07:43:14,895 | INFO | pilot.control.monitor | control | [monitor] control thread has ended [2021-07-07 03:44:14] 2021-07-07 07:43:15,064 | WARNING | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration [2021-07-07 03:44:14] 2021-07-07 07:43:15,084 | DEBUG | pilot.control.data | control | data control ending since graceful_stop has been set [2021-07-07 03:44:14] 2021-07-07 07:43:15,085 | DEBUG | pilot.control.data | control | will not set job_aborted yet [2021-07-07 03:44:14] 2021-07-07 07:43:15,085 | DEBUG | pilot.control.data | control | [data] control thread has finished [2021-07-07 03:44:14] 2021-07-07 07:43:15,180 | DEBUG | pilot.control.payload | control | payload control ending since graceful_stop has been set [2021-07-07 03:44:14] 2021-07-07 07:43:15,181 | DEBUG | pilot.control.payload | control | will not set job_aborted yet [2021-07-07 03:44:14] 2021-07-07 07:43:15,181 | DEBUG | pilot.control.payload | control | [payload] control thread has finished [2021-07-07 03:44:14] 2021-07-07 07:43:15,241 | DEBUG | pilot.control.payload | failed_post | will not set job_aborted yet [2021-07-07 03:44:14] 2021-07-07 07:43:15,241 | INFO | pilot.control.payload | failed_post | [payload] failed_post thread has finished [2021-07-07 03:44:14] 2021-07-07 07:43:15,379 | DEBUG | pilot.control.payload | validate_post | will not set job_aborted yet [2021-07-07 03:44:14] 2021-07-07 07:43:15,379 | INFO | pilot.control.payload | validate_post | [payload] validate_post thread has finished [2021-07-07 03:44:14] 2021-07-07 07:43:15,491 | DEBUG | pilot.control.data | copytool_in | will not set job_aborted yet [2021-07-07 03:44:14] 2021-07-07 07:43:15,491 | DEBUG | pilot.control.data | copytool_in | [data] copytool_in thread has finished [2021-07-07 03:44:14] 2021-07-07 07:43:15,537 | DEBUG | pilot.control.payload | validate_pre | will not set job_aborted yet [2021-07-07 03:44:14] 2021-07-07 07:43:15,537 | INFO | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished [2021-07-07 03:44:14] 2021-07-07 07:43:15,893 | DEBUG | pilot.control.data | copytool_out | will not set job_aborted yet [2021-07-07 03:44:14] 2021-07-07 07:43:15,893 | DEBUG | pilot.control.data | copytool_out | [data] copytool_out thread has finished [2021-07-07 03:44:14] 2021-07-07 07:43:15,962 | DEBUG | pilot.control.job | validate | will not set job_aborted yet [2021-07-07 03:44:14] 2021-07-07 07:43:15,962 | DEBUG | pilot.control.job | validate | [job] validate thread has finished [2021-07-07 03:44:14] 2021-07-07 07:43:16,011 | DEBUG | pilot.control.payload | execute_payloads | will not set job_aborted yet [2021-07-07 03:44:14] 2021-07-07 07:43:16,011 | INFO | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished [2021-07-07 03:44:14] 2021-07-07 07:43:16,124 | DEBUG | pilot.control.job | control | job control ending since graceful_stop has been set [2021-07-07 03:44:14] 2021-07-07 07:43:16,125 | DEBUG | pilot.control.job | control | will not set job_aborted yet [2021-07-07 03:44:14] 2021-07-07 07:43:16,125 | DEBUG | pilot.control.job | control | [job] control thread has finished [2021-07-07 03:44:14] 2021-07-07 07:43:16,340 | DEBUG | pilot.control.job | create_data_payload | will not set job_aborted yet [2021-07-07 03:44:14] 2021-07-07 07:43:16,341 | DEBUG | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished [2021-07-07 03:44:14] 2021-07-07 07:43:16,468 | WARNING | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration [2021-07-07 03:44:14] 2021-07-07 07:43:16,469 | DEBUG | pilot.control.job | queue_monitor | will not set job_aborted yet [2021-07-07 03:44:14] 2021-07-07 07:43:16,469 | DEBUG | pilot.control.job | queue_monitor | [job] queue monitor thread has finished [2021-07-07 03:44:14] 2021-07-07 07:43:18,065 | DEBUG | pilot.control.data | queue_monitoring | will not set job_aborted yet [2021-07-07 03:44:14] 2021-07-07 07:43:18,065 | DEBUG | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished [2021-07-07 03:44:14] 2021-07-07 07:44:10,578 | WARNING | pilot.control.job | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 72 s) [2021-07-07 03:44:14] 2021-07-07 07:44:10,582 | DEBUG | pilot.util.processes | threads_aborted | aborting since the last relevant thread is about to finish [2021-07-07 03:44:14] 2021-07-07 07:44:10,582 | DEBUG | pilot.control.job | job_monitor | will proceed to set job_aborted [2021-07-07 03:44:14] 2021-07-07 07:44:10,583 | DEBUG | pilot.control.job | job_monitor | [job] job monitor thread has finished [2021-07-07 03:44:14] 2021-07-07 07:44:10,617 | INFO | pilot.workflow.generic | run | end of generic workflow (traces error code: 0) [2021-07-07 03:44:14] 2021-07-07 07:44:10,619 | INFO | root | wrap_up | traces error code: 0 [2021-07-07 03:44:14] 2021-07-07 07:44:10,620 | INFO | root | wrap_up | pilot has finished [2021-07-07 03:44:14] 2021-07-07 07:44:10,896 [wrapper] ==== pilot stdout END ==== [2021-07-07 03:44:14] 2021-07-07 07:44:11,120 [wrapper] ==== wrapper stdout RESUME ==== [2021-07-07 03:44:14] 2021-07-07 07:44:11,189 [wrapper] Pilot exit status: 0 [2021-07-07 03:44:14] 2021-07-07 07:44:11,891 [wrapper] pandaids: 5111684807 [2021-07-07 03:44:14] 2021-07-07 07:44:12,358 [wrapper] apfmon messages muted [2021-07-07 03:44:14] 2021-07-07 07:44:12,419 [wrapper] Test setup, not cleaning [2021-07-07 03:44:14] 2021-07-07 07:44:12,468 [wrapper] ==== wrapper stdout END ==== [2021-07-07 03:44:14] 2021-07-07 07:44:12,612 [wrapper] ==== wrapper stderr END ==== [2021-07-07 03:44:14] 2021-07-07 07:44:12,824 [wrapper] wrapperexiting ec=0, duration=2761 [2021-07-07 03:44:14] 2021-07-07 07:44:12,895 [wrapper] apfmon messages muted [2021-07-07 03:44:14] *** Error codes and diagnostics *** [2021-07-07 03:44:14] "exeErrorCode": 0, [2021-07-07 03:44:14] "exeErrorDiag": "", [2021-07-07 03:44:14] "pilotErrorCode": 0, [2021-07-07 03:44:14] "pilotErrorDiag": "", [2021-07-07 03:44:14] *** Listing of results directory *** [2021-07-07 03:44:14] total 44352 [2021-07-07 03:44:14] -rw-r--r-- 1 boinc boinc 335719 Jul 1 21:06 pilot2.tar.gz [2021-07-07 03:44:14] -rwx------ 1 boinc boinc 20316 Jul 7 02:52 runpilot2-wrapper.sh [2021-07-07 03:44:14] -rw-r--r-- 1 boinc boinc 3214 Jul 7 02:52 queuedata.json [2021-07-07 03:44:14] -rw-r--r-- 1 boinc boinc 107 Jul 7 02:58 wrapper_26015_x86_64-pc-linux-gnu [2021-07-07 03:44:14] -rwxr-xr-x 1 boinc boinc 6966 Jul 7 02:58 run_atlas [2021-07-07 03:44:14] -rw-r--r-- 1 boinc boinc 112 Jul 7 02:58 job.xml [2021-07-07 03:44:14] drwxrwx--x 2 boinc boinc 4096 Jul 7 02:58 shared [2021-07-07 03:44:14] -rw-r--r-- 1 boinc boinc 6188 Jul 7 02:58 init_data.xml [2021-07-07 03:44:14] -rw-r--r-- 1 boinc boinc 0 Jul 7 02:58 boinc_lockfile [2021-07-07 03:44:14] -rw-r--r-- 1 boinc boinc 16569 Jul 7 02:58 start_atlas.sh [2021-07-07 03:44:14] -rw-r--r-- 1 boinc boinc 345318 Jul 7 02:58 input.tar.gz [2021-07-07 03:44:14] -rw-r--r-- 1 boinc boinc 37727106 Jul 7 02:58 EVNT.04972714._000037.pool.root.1 [2021-07-07 03:44:14] -rw-r--r-- 1 boinc boinc 2599 Jul 7 02:58 pandaJob.out [2021-07-07 03:44:14] -rw------- 1 boinc boinc 1061301 Jul 7 02:59 agis_schedconf.cvmfs.json [2021-07-07 03:44:14] -rw------- 1 boinc boinc 1963337 Jul 7 02:59 cric_ddmendpoints.json [2021-07-07 03:44:14] drwx------ 4 boinc boinc 4096 Jul 7 02:59 pilot2 [2021-07-07 03:44:14] -rw------- 1 boinc boinc 1374670 Jul 7 03:42 output.1.8ccd5fb7-e4c1-4cd3-ae49-1c65e529de7f_16340.pool.root [2021-07-07 03:44:14] -rw------- 1 boinc boinc 1020 Jul 7 03:43 memory_monitor_summary.json [2021-07-07 03:44:14] -rw------- 1 boinc boinc 185361 Jul 7 03:43 8ccd5fb7-e4c1-4cd3-ae49-1c65e529de7f_16340.1.job.log.tgz [2021-07-07 03:44:14] -rw-r--r-- 1 boinc boinc 533 Jul 7 03:43 boinc_task_state.xml [2021-07-07 03:44:14] -rw------- 1 boinc boinc 6607 Jul 7 03:43 heartbeat.json [2021-07-07 03:44:14] -rw-r--r-- 1 boinc boinc 8192 Jul 7 03:44 boinc_mmap_file [2021-07-07 03:44:14] -rw-r--r-- 1 boinc boinc 25 Jul 7 03:44 wrapper_checkpoint.txt [2021-07-07 03:44:14] -rw------- 1 boinc boinc 7518 Jul 7 03:44 pilotlog.txt [2021-07-07 03:44:14] -rw------- 1 boinc boinc 324324 Jul 7 03:44 8ccd5fb7-e4c1-4cd3-ae49-1c65e529de7f_16340.1.job.log [2021-07-07 03:44:14] -rw------- 1 boinc boinc 536 Jul 7 03:44 output.list [2021-07-07 03:44:14] -rw-r--r-- 1 boinc boinc 748 Jul 7 03:44 runtime_log [2021-07-07 03:44:14] -rw------- 1 boinc boinc 1904640 Jul 7 03:44 result.tar.gz [2021-07-07 03:44:14] -rw-r--r-- 1 boinc boinc 9434 Jul 7 03:44 runtime_log.err [2021-07-07 03:44:14] -rw------- 1 boinc boinc 563 Jul 7 03:44 7irNDmwaGLzn7Olcko1bjSoqABFKDmABFKDmumdXDm1jFKDmL7Samm.diag [2021-07-07 03:44:14] -rw-r--r-- 1 boinc boinc 29669 Jul 7 03:44 stderr.txt [2021-07-07 03:44:14] HITS file was successfully produced: [2021-07-07 03:44:14] -rw------- 1 boinc boinc 1374670 Jul 7 03:42 shared/HITS.pool.root.1 [2021-07-07 03:44:14] *** Contents of shared directory: *** [2021-07-07 03:44:14] total 40408 [2021-07-07 03:44:14] -rw-r--r-- 1 boinc boinc 16569 Jul 7 02:58 start_atlas.sh [2021-07-07 03:44:14] -rw-r--r-- 1 boinc boinc 345318 Jul 7 02:58 input.tar.gz [2021-07-07 03:44:14] -rw-r--r-- 1 boinc boinc 37727106 Jul 7 02:58 ATLAS.root_0 [2021-07-07 03:44:14] -rw------- 1 boinc boinc 1374670 Jul 7 03:42 HITS.pool.root.1 [2021-07-07 03:44:14] -rw------- 1 boinc boinc 1904640 Jul 7 03:44 result.tar.gz 03:44:15 (5286): run_atlas exited; CPU time 900.313850 03:44:15 (5286): called boinc_finish(0) </stderr_txt> ]]>
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