Name | dUgMDmCVvLzn7Olcko1bjSoqABFKDmABFKDmumdXDmLmFKDmObFTdn_0 |
Workunit | 2101834 |
Created | 9 Jul 2021, 2:33:05 UTC |
Sent | 9 Jul 2021, 2:36:48 UTC |
Report deadline | 16 Jul 2021, 2:36:48 UTC |
Received | 9 Jul 2021, 4:23:47 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 4357 |
Run time | 43 min 22 sec |
CPU time | 27 min 25 sec |
Validate state | Valid |
Credit | 10.37 |
Device peak FLOPS | 3.04 GFLOPS |
Application version | ATLAS Simulation v1.04 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.38 GB |
Peak swap size | 34.18 GB |
Peak disk usage | 82.53 MB |
<core_client_version>7.9.3</core_client_version> <![CDATA[ <stderr_txt> 22:39:05 (18882): wrapper (7.7.26015): starting 22:39:05 (18882): wrapper: running run_atlas (--nthreads 1) [2021-07-08 22:39:05] Arguments: --nthreads 1 [2021-07-08 22:39:05] Threads: 1 [2021-07-08 22:39:05] Checking for CVMFS [2021-07-08 22:39:11] Probing /cvmfs/atlas.cern.ch... OK [2021-07-08 22:39:12] Probing /cvmfs/atlas-condb.cern.ch... OK [2021-07-08 22:39:12] Running cvmfs_config stat atlas.cern.ch [2021-07-08 22:39:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2021-07-08 22:39:13] 2.9.0.0 19634 0 24708 88023 3 1 2282744 4194305 0 130560 0 0 0.000 529 1296 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 0 [2021-07-08 22:39:13] CVMFS is ok [2021-07-08 22:39:13] Efficiency of ATLAS tasks can be improved by the following measure(s): [2021-07-08 22:39:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io. [2021-07-08 22:39:13] Small home clusters do not require a local http proxy but it is suggested if [2021-07-08 22:39:13] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks. [2021-07-08 22:39:13] Further information can be found at the LHC@home message board. [2021-07-08 22:39:13] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2021-07-08 22:39:13] Checking for singularity binary... [2021-07-08 22:39:13] Using singularity found in PATH at /usr/local/bin/singularity [2021-07-08 22:39:13] Running /usr/local/bin/singularity --version [2021-07-08 22:39:13] singularity version 3.7.2+10-ga969f0f8c [2021-07-08 22:39:13] Checking singularity works with /usr/local/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2021-07-08 22:39:15] E5-2670 [2021-07-08 22:39:15] Singularity works [2021-07-08 22:39:15] Starting ATLAS job with PandaID=5114381939 [2021-07-08 22:39:15] Running command: /usr/local/bin/singularity exec --pwd /var/lib/boinc-client/slots/41 -B /cvmfs,/var /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2021-07-08 23:22:25] *** The last 200 lines of the pilot log: *** [2021-07-08 23:22:25] "reportVersion": "1.0.0", [2021-07-08 23:22:25] "resource": { [2021-07-08 23:22:25] "cpuUnit": "seconds", [2021-07-08 23:22:25] "externalsCpuTime": 23, [2021-07-08 23:22:25] "memUnit": "kB", [2021-07-08 23:22:25] "transformCpuTime": 6, [2021-07-08 23:22:25] "wallTime": 2089 [2021-07-08 23:22:25] } [2021-07-08 23:22:25] } [2021-07-08 23:22:25] 2021-07-09 03:21:25,602 | DEBUG | pilot.user.atlas.common | update_server | no need to update logstash for this job [2021-07-08 23:22:25] 2021-07-09 03:21:25,602 | INFO | pilot.control.job | send_state | pilot will not update the server (heartbeat message will be written to file) [2021-07-08 23:22:25] 2021-07-09 03:21:25,602 | INFO | pilot.control.job | send_state | job 5114381939 has finished - writing final server update [2021-07-08 23:22:25] 2021-07-09 03:21:25,602 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics_string | job definition core count: 1 [2021-07-08 23:22:25] 2021-07-09 03:21:25,603 | WARNING | pilot.user.atlas.common | get_executor_dictionary | no such key: executor [2021-07-08 23:22:25] 2021-07-09 03:21:25,603 | WARNING | pilot.user.atlas.common | get_executor_dictionary | no such key: executor [2021-07-08 23:22:25] 2021-07-09 03:21:25,603 | INFO | pilot.user.atlas.jobmetrics | get_job_metrics_string | will not add max space = -36145503 B to job metrics [2021-07-08 23:22:25] 2021-07-09 03:21:25,604 | DEBUG | pilot.api.analytics | get_fitted_data | removing tails from data to be fitted [2021-07-08 23:22:25] 2021-07-09 03:21:25,604 | INFO | pilot.api.analytics | get_fitted_data | fitting pss+swap vs Time [2021-07-08 23:22:25] 2021-07-09 03:21:25,609 | INFO | pilot.api.analytics | get_fitted_data | current memory leak: 424.49 B/s (using 29 data points, chi2=1177502) [2021-07-08 23:22:25] 2021-07-09 03:21:25,609 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics | job metrics="actualCoreCount=4 nEvents=2 leak=424.49 chi2=1177502 eventnumber=1" [2021-07-08 23:22:25] 2021-07-09 03:21:25,610 | INFO | pilot.control.job | get_data_structure | mean actualcorecount: 6.333333 [2021-07-08 23:22:25] 2021-07-09 03:21:25,610 | INFO | pilot.control.job | get_data_structure | total number of processed events: 2 (read) [2021-07-08 23:22:25] 2021-07-09 03:21:25,630 | INFO | pilot.util.container | execute | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2021-07-08 23:22:25] 2021-07-09 03:21:26,069 | INFO | pilot.user.atlas.utilities | get_memory_values | using path: /var/lib/boinc-client/slots/41/PanDA_Pilot-5114381939/memory_monitor_summary.json (trf n [2021-07-08 23:22:25] 2021-07-09 03:21:26,079 | DEBUG | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'Avg': {'nprocs': 3.916, 'nthreads': 4.833, 'pss': 1043175.0, 'rchar': 135392.0, [2021-07-08 23:22:25] 2021-07-09 03:21:26,079 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard info from prmon json [2021-07-08 23:22:25] 2021-07-09 03:21:26,079 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard memory fields from prmon json [2021-07-08 23:22:25] 2021-07-09 03:21:26,079 | INFO | pilot.util.timing | timing_report | .............................. [2021-07-08 23:22:25] 2021-07-09 03:21:26,080 | INFO | pilot.util.timing | timing_report | . Timing measurements: [2021-07-08 23:22:25] 2021-07-09 03:21:26,080 | INFO | pilot.util.timing | timing_report | . get job = 0 s [2021-07-08 23:22:25] 2021-07-09 03:21:26,080 | INFO | pilot.util.timing | timing_report | . initial setup = 3 s [2021-07-08 23:22:25] 2021-07-09 03:21:26,080 | INFO | pilot.util.timing | timing_report | . payload setup = 106 s [2021-07-08 23:22:25] 2021-07-09 03:21:26,080 | INFO | pilot.util.timing | timing_report | . total setup = 109 s [2021-07-08 23:22:25] 2021-07-09 03:21:26,080 | INFO | pilot.util.timing | timing_report | . stage-in = 0 s [2021-07-08 23:22:25] 2021-07-09 03:21:26,080 | INFO | pilot.util.timing | timing_report | . payload execution = 2237 s [2021-07-08 23:22:25] 2021-07-09 03:21:26,081 | INFO | pilot.util.timing | timing_report | . stage-out = 3 s [2021-07-08 23:22:25] 2021-07-09 03:21:26,081 | INFO | pilot.util.timing | timing_report | .............................. [2021-07-08 23:22:25] 2021-07-09 03:21:26,081 | DEBUG | pilot.control.job | send_state | is_harvester_mode(args) : False [2021-07-08 23:22:25] 2021-07-09 03:21:26,082 | DEBUG | pilot.control.job | write_heartbeat_to_file | heartbeat dictionary: {'jobId': '5114381939', 'state': 'finished', 'timestamp': '2021-07-08T23:21:25 [2021-07-08 23:22:25] 2021-07-09 03:21:26,082 | DEBUG | pilot.control.job | write_heartbeat_to_file | wrote heartbeat to file /var/lib/boinc-client/slots/41/heartbeat.json [2021-07-08 23:22:25] 2021-07-09 03:21:26,083 | DEBUG | pilot.control.job | queue_monitor | job 5114381939 was dequeued from the monitored payloads queue [2021-07-08 23:22:25] 2021-07-09 03:21:26,474 | DEBUG | pilot.control.job | queue_monitor | tmp job object deleted [2021-07-08 23:22:25] 2021-07-09 03:21:26,476 | INFO | pilot.control.job | make_job_report | [2021-07-08 23:22:25] 2021-07-09 03:21:26,477 | INFO | pilot.control.job | make_job_report | job summary report [2021-07-08 23:22:25] 2021-07-09 03:21:26,477 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2021-07-08 23:22:25] 2021-07-09 03:21:26,477 | INFO | pilot.control.job | make_job_report | PanDA job id: 5114381939 [2021-07-08 23:22:25] 2021-07-09 03:21:26,477 | INFO | pilot.control.job | make_job_report | task id: NULL [2021-07-08 23:22:25] 2021-07-09 03:21:26,477 | INFO | pilot.control.job | make_job_report | errors: (none) [2021-07-08 23:22:25] 2021-07-09 03:21:26,477 | INFO | pilot.control.job | make_job_report | status: LOG_TRANSFER = DONE [2021-07-08 23:22:25] 2021-07-09 03:21:26,477 | INFO | pilot.control.job | make_job_report | pilot state: finished [2021-07-08 23:22:25] 2021-07-09 03:21:26,477 | INFO | pilot.control.job | make_job_report | transexitcode: 0 [2021-07-08 23:22:25] 2021-07-09 03:21:26,477 | INFO | pilot.control.job | make_job_report | exeerrorcode: 0 [2021-07-08 23:22:25] 2021-07-09 03:21:26,478 | INFO | pilot.control.job | make_job_report | exeerrordiag: [2021-07-08 23:22:25] 2021-07-09 03:21:26,478 | INFO | pilot.control.job | make_job_report | exitcode: 0 [2021-07-08 23:22:25] 2021-07-09 03:21:26,478 | INFO | pilot.control.job | make_job_report | exitmsg: OK [2021-07-08 23:22:25] 2021-07-09 03:21:26,478 | INFO | pilot.control.job | make_job_report | cpuconsumptiontime: 1668 s [2021-07-08 23:22:25] 2021-07-09 03:21:26,478 | INFO | pilot.control.job | make_job_report | nevents: 2 [2021-07-08 23:22:25] 2021-07-09 03:21:26,478 | INFO | pilot.control.job | make_job_report | neventsw: 0 [2021-07-08 23:22:25] 2021-07-09 03:21:26,478 | INFO | pilot.control.job | make_job_report | pid: 67451 [2021-07-08 23:22:25] 2021-07-09 03:21:26,478 | INFO | pilot.control.job | make_job_report | pgrp: 67451 [2021-07-08 23:22:25] 2021-07-09 03:21:26,479 | INFO | pilot.control.job | make_job_report | corecount: 1 [2021-07-08 23:22:25] 2021-07-09 03:21:26,479 | INFO | pilot.control.job | make_job_report | event service: False [2021-07-08 23:22:25] 2021-07-09 03:21:26,479 | INFO | pilot.control.job | make_job_report | sizes: {23531611: 3855944, 23531612: 3856113, 23531613: 3856113, 23531614: 3856277, 23531624: 385627 [2021-07-08 23:22:25] 2021-07-09 03:21:26,479 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2021-07-08 23:22:25] 2021-07-09 03:21:26,479 | INFO | pilot.control.job | make_job_report | [2021-07-08 23:22:25] 2021-07-09 03:21:26,479 | DEBUG | pilot.control.job | has_job_completed | ls -lF /var/lib/boinc-client/slots/41: [2021-07-08 23:22:25] [2021-07-08 23:22:25] 2021-07-09 03:21:26,479 | INFO | pilot.util.container | execute | executing command: ls -lF /var/lib/boinc-client/slots/41 [2021-07-08 23:22:25] 2021-07-09 03:21:26,564 | DEBUG | pilot.control.job | has_job_completed | total 45928 [2021-07-08 23:22:25] -rw------- 1 boinc boinc 220933 Jul 8 23:21 8867be13-dd84-4097-ba19-db4429421ff9_34007.1.job.log [2021-07-08 23:22:25] -rw------- 1 boinc boinc 166958 Jul 8 23:21 8867be13-dd84-4097-ba19-db4429421ff9_34007.1.job.log.tgz [2021-07-08 23:22:25] -rw------- 1 boinc boinc 1063624 Jul 8 22:41 agis_schedconf.cvmfs.json [2021-07-08 23:22:25] -rw-r--r-- 1 boinc boinc 0 Jul 8 22:39 boinc_lockfile [2021-07-08 23:22:25] -rw-r--r-- 1 boinc boinc 8192 Jul 8 23:21 boinc_mmap_file [2021-07-08 23:22:25] -rw-r--r-- 1 boinc boinc 535 Jul 8 23:19 boinc_task_state.xml [2021-07-08 23:22:25] -rw------- 1 boinc boinc 1962294 Jul 8 22:41 cric_ddmendpoints.json [2021-07-08 23:22:25] -rw------- 1 boinc boinc 130 Jul 8 22:39 dUgMDmCVvLzn7Olcko1bjSoqABFKDmABFKDmumdXDmLmFKDmObFTdn.diag [2021-07-08 23:22:25] -rw-r--r-- 1 boinc boinc 37073557 Jul 8 22:39 EVNT.04972714._000021.pool.root.1 [2021-07-08 23:22:25] -rw------- 1 boinc boinc 7097 Jul 8 23:21 heartbeat.json [2021-07-08 23:22:25] -rw-r--r-- 1 boinc boinc 6188 Jul 8 22:39 init_data.xml [2021-07-08 23:22:25] -rw-r--r-- 1 boinc boinc 344142 Jul 8 22:39 input.tar.gz [2021-07-08 23:22:25] -rw-r--r-- 1 boinc boinc 112 Jul 8 22:39 job.xml [2021-07-08 23:22:25] -rw------- 1 boinc boinc 1018 Jul 8 23:21 memory_monitor_summary.json [2021-07-08 23:22:25] -rw------- 1 boinc boinc 5495963 Jul 8 23:19 output.1.8867be13-dd84-4097-ba19-db4429421ff9_34007.pool.root [2021-07-08 23:22:25] -rw------- 1 boinc boinc 536 Jul 8 23:21 output.list [2021-07-08 23:22:25] -rw-r--r-- 1 boinc boinc 2650 Jul 8 22:39 pandaJob.out [2021-07-08 23:22:25] drwxrwx--- 2 boinc boinc 4096 Jul 8 23:21 PanDA_Pilot-5114381939/ [2021-07-08 23:22:25] drwx------ 4 boinc boinc 4096 Jul 8 22:41 pilot2/ [2021-07-08 23:22:25] -rw-r--r-- 1 boinc boinc 334707 Jul 8 22:32 pilot2.tar.gz [2021-07-08 23:22:25] -rw------- 1 boinc boinc 201963 Jul 8 23:21 pilotlog.txt [2021-07-08 23:22:25] -rw-r--r-- 1 boinc boinc 3214 Jul 8 22:32 queuedata.json [2021-07-08 23:22:25] -rwxr-xr-x 1 boinc boinc 6966 Jul 8 22:39 run_atlas* [2021-07-08 23:22:25] -rwx------ 1 boinc boinc 20591 Jul 8 22:32 runpilot2-wrapper.sh* [2021-07-08 23:22:25] -rw-r--r-- 1 boinc boinc 407 Jul 8 22:39 runtime_log [2021-07-08 23:22:25] -rw-r--r-- 1 boinc boinc 5574 Jul 8 22:39 runtime_log.err [2021-07-08 23:22:25] drwxrwx--x 2 boinc boinc 4096 Jul 8 22:39 shared/ [2021-07-08 23:22:25] -rw-r--r-- 1 boinc boinc 16551 Jul 8 22:39 start_atlas.sh [2021-07-08 23:22:25] -rw-r--r-- 1 boinc boinc 2196 Jul 8 22:39 stderr.txt [2021-07-08 23:22:25] -rw-r--r-- 1 boinc boinc 107 Jul 8 22:39 wrapper_26015_x86_64-pc-linux-gnu [2021-07-08 23:22:25] -rw-r--r-- 1 boinc boinc 26 Jul 8 23:21 wrapper_checkpoint.txt [2021-07-08 23:22:25] 2021-07-09 03:21:26,564 | INFO | pilot.util.queuehandling | queue_report | queue jobs has 0 job(s) [2021-07-08 23:22:25] 2021-07-09 03:21:26,565 | INFO | pilot.util.queuehandling | queue_report | queue payloads has 0 job(s) [2021-07-08 23:22:25] 2021-07-09 03:21:26,565 | INFO | pilot.util.queuehandling | queue_report | queue data_in has 0 job(s) [2021-07-08 23:22:25] 2021-07-09 03:21:26,565 | INFO | pilot.util.queuehandling | queue_report | queue data_out has 0 job(s) [2021-07-08 23:22:25] 2021-07-09 03:21:26,565 | INFO | pilot.util.queuehandling | queue_report | queue current_data_in has 0 job(s) [2021-07-08 23:22:25] 2021-07-09 03:21:26,565 | INFO | pilot.util.queuehandling | queue_report | queue validated_jobs has 0 job(s) [2021-07-08 23:22:25] 2021-07-09 03:21:26,565 | INFO | pilot.util.queuehandling | queue_report | queue validated_payloads has 0 job(s) [2021-07-08 23:22:25] 2021-07-09 03:21:26,565 | INFO | pilot.util.queuehandling | queue_report | queue monitored_payloads has 0 job(s) [2021-07-08 23:22:25] 2021-07-09 03:21:26,566 | INFO | pilot.util.queuehandling | queue_report | queue finished_jobs has 0 job(s) [2021-07-08 23:22:25] 2021-07-09 03:21:26,566 | INFO | pilot.util.queuehandling | queue_report | queue finished_payloads has 0 job(s) [2021-07-08 23:22:25] 2021-07-09 03:21:26,566 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_in has 1 job(s) [2021-07-08 23:22:25] 2021-07-09 03:21:26,566 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_out has 0 job(s) [2021-07-08 23:22:25] 2021-07-09 03:21:26,566 | INFO | pilot.util.queuehandling | queue_report | queue failed_jobs has 0 job(s) [2021-07-08 23:22:25] 2021-07-09 03:21:26,566 | INFO | pilot.util.queuehandling | queue_report | queue failed_payloads has 0 job(s) [2021-07-08 23:22:25] 2021-07-09 03:21:26,566 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_in has 0 job(s) [2021-07-08 23:22:25] 2021-07-09 03:21:26,566 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_out has 0 job(s) [2021-07-08 23:22:25] 2021-07-09 03:21:26,567 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobs has 0 job(s) [2021-07-08 23:22:25] 2021-07-09 03:21:26,567 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s) [2021-07-08 23:22:25] 2021-07-09 03:21:26,567 | INFO | pilot.control.job | has_job_completed | job 5114381939 has completed (purged errors) [2021-07-08 23:22:25] 2021-07-09 03:21:26,567 | INFO | pilot.util.processes | cleanup | overall cleanup function is called [2021-07-08 23:22:25] 2021-07-09 03:21:26,570 | DEBUG | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc-client/slots/41/PanDA_Pilot-5114381939 [2021-07-08 23:22:25] 2021-07-09 03:21:27,576 | INFO | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [67451] [2021-07-08 23:22:25] 2021-07-09 03:21:27,577 | INFO | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 67451 [2021-07-08 23:22:25] 2021-07-09 03:21:27,577 | INFO | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes [2021-07-08 23:22:25] 2021-07-09 03:21:28,580 | INFO | pilot.util.processes | cleanup | collected zombie processes [2021-07-08 23:22:25] 2021-07-09 03:21:28,581 | INFO | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=67451 [2021-07-08 23:22:25] 2021-07-09 03:21:29,097 | INFO | pilot.util.processes | kill_processes | process IDs to be killed: [67451] (in reverse order) [2021-07-08 23:22:25] 2021-07-09 03:21:29,545 | WARNING | pilot.util.processes | kill_processes | found no corresponding commands to process id(s) [2021-07-08 23:22:25] 2021-07-09 03:21:29,546 | INFO | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs [2021-07-08 23:22:25] 2021-07-09 03:21:29,546 | DEBUG | pilot.util.queuehandling | purge_queue | queue purged [2021-07-08 23:22:25] 2021-07-09 03:21:29,546 | INFO | pilot.control.job | retrieve | ready for new job [2021-07-08 23:22:25] 2021-07-09 03:21:29,547 | INFO | root | retrieve | pilot has finished for previous job - re-establishing logging [2021-07-08 23:22:25] 2021-07-09 03:21:29,548 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2021-07-08 23:22:25] 2021-07-09 03:21:29,549 | INFO | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 2.12.2 (1) *** [2021-07-08 23:22:25] 2021-07-09 03:21:29,549 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2021-07-08 23:22:25] 2021-07-09 03:21:29,549 | INFO | pilot.util.auxiliary | pilot_version_banner | [2021-07-08 23:22:25] 2021-07-09 03:21:29,570 | INFO | pilot.util.auxiliary | display_architecture_info | architecture information: [2021-07-08 23:22:25] 2021-07-09 03:21:30,305 | INFO | pilot.util.auxiliary | display_architecture_info | [2021-07-08 23:22:25] LSB Version: :core-4.1-amd64:core-4.1-noarch [2021-07-08 23:22:25] Distributor ID: CentOS [2021-07-08 23:22:25] Description: CentOS Linux release 7.8.2003 (Core) [2021-07-08 23:22:25] Release: 7.8.2003 [2021-07-08 23:22:25] Codename: Core [2021-07-08 23:22:25] 2021-07-09 03:21:30,305 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2021-07-08 23:22:25] 2021-07-09 03:21:30,808 | DEBUG | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc-client/slots/41 [2021-07-08 23:22:25] 2021-07-09 03:21:31,190 | INFO | pilot.util.monitoring | check_local_space | sufficient remaining disk space (32652656640 B) [2021-07-08 23:22:25] 2021-07-09 03:21:31,191 | WARNING | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job [2021-07-08 23:22:25] 2021-07-09 03:21:31,191 | DEBUG | pilot.control.job | retrieve | will not set job_aborted yet [2021-07-08 23:22:25] 2021-07-09 03:21:31,191 | DEBUG | pilot.control.job | retrieve | [job] retrieve thread has finished [2021-07-08 23:22:25] 2021-07-09 03:21:31,192 | WARNING | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration [2021-07-08 23:22:25] 2021-07-09 03:21:31,196 | WARNING | pilot.control.monitor | control | aborting monitor loop since graceful_stop has been set [2021-07-08 23:22:25] 2021-07-09 03:21:31,196 | INFO | pilot.control.monitor | control | [monitor] control thread has ended [2021-07-08 23:22:25] 2021-07-09 03:21:31,199 | WARNING | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration [2021-07-08 23:22:25] 2021-07-09 03:21:31,300 | DEBUG | pilot.control.payload | validate_pre | will not set job_aborted yet [2021-07-08 23:22:25] 2021-07-09 03:21:31,301 | INFO | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished [2021-07-08 23:22:25] 2021-07-09 03:21:31,306 | DEBUG | pilot.control.job | validate | will not set job_aborted yet [2021-07-08 23:22:25] 2021-07-09 03:21:31,307 | DEBUG | pilot.control.job | validate | [job] validate thread has finished [2021-07-08 23:22:25] 2021-07-09 03:21:31,336 | DEBUG | pilot.control.job | control | job control ending since graceful_stop has been set [2021-07-08 23:22:25] 2021-07-09 03:21:31,337 | DEBUG | pilot.control.job | control | will not set job_aborted yet [2021-07-08 23:22:25] 2021-07-09 03:21:31,337 | DEBUG | pilot.control.job | control | [job] control thread has finished [2021-07-08 23:22:25] 2021-07-09 03:21:31,492 | WARNING | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration [2021-07-08 23:22:25] 2021-07-09 03:21:31,493 | DEBUG | pilot.control.job | queue_monitor | will not set job_aborted yet [2021-07-08 23:22:25] 2021-07-09 03:21:31,493 | DEBUG | pilot.control.job | queue_monitor | [job] queue monitor thread has finished [2021-07-08 23:22:25] 2021-07-09 03:21:31,520 | DEBUG | pilot.control.payload | failed_post | will not set job_aborted yet [2021-07-08 23:22:25] 2021-07-09 03:21:31,520 | INFO | pilot.control.payload | failed_post | [payload] failed_post thread has finished [2021-07-08 23:22:25] 2021-07-09 03:21:31,596 | DEBUG | pilot.control.payload | execute_payloads | will not set job_aborted yet [2021-07-08 23:22:25] 2021-07-09 03:21:31,597 | INFO | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished [2021-07-08 23:22:25] 2021-07-09 03:21:31,648 | DEBUG | pilot.control.data | control | data control ending since graceful_stop has been set [2021-07-08 23:22:25] 2021-07-09 03:21:31,649 | DEBUG | pilot.control.data | control | will not set job_aborted yet [2021-07-08 23:22:25] 2021-07-09 03:21:31,649 | DEBUG | pilot.control.data | control | [data] control thread has finished [2021-07-08 23:22:25] 2021-07-09 03:21:31,655 | DEBUG | pilot.control.payload | control | payload control ending since graceful_stop has been set [2021-07-08 23:22:25] 2021-07-09 03:21:31,655 | DEBUG | pilot.control.payload | control | will not set job_aborted yet [2021-07-08 23:22:25] 2021-07-09 03:21:31,655 | DEBUG | pilot.control.payload | control | [payload] control thread has finished [2021-07-08 23:22:25] 2021-07-09 03:21:32,188 | DEBUG | pilot.control.data | copytool_in | will not set job_aborted yet [2021-07-08 23:22:25] 2021-07-09 03:21:32,189 | DEBUG | pilot.control.data | copytool_in | [data] copytool_in thread has finished [2021-07-08 23:22:25] 2021-07-09 03:21:32,199 | DEBUG | pilot.control.data | copytool_out | will not set job_aborted yet [2021-07-08 23:22:25] 2021-07-09 03:21:32,200 | DEBUG | pilot.control.data | copytool_out | [data] copytool_out thread has finished [2021-07-08 23:22:25] 2021-07-09 03:21:32,416 | DEBUG | pilot.control.job | create_data_payload | will not set job_aborted yet [2021-07-08 23:22:25] 2021-07-09 03:21:32,417 | DEBUG | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished [2021-07-08 23:22:25] 2021-07-09 03:21:32,687 | DEBUG | pilot.control.payload | validate_post | will not set job_aborted yet [2021-07-08 23:22:25] 2021-07-09 03:21:32,687 | INFO | pilot.control.payload | validate_post | [payload] validate_post thread has finished [2021-07-08 23:22:25] 2021-07-09 03:21:34,200 | DEBUG | pilot.control.data | queue_monitoring | will not set job_aborted yet [2021-07-08 23:22:25] 2021-07-09 03:21:34,200 | DEBUG | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished [2021-07-08 23:22:25] 2021-07-09 03:22:18,512 | WARNING | pilot.control.job | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 73 s) [2021-07-08 23:22:25] 2021-07-09 03:22:18,762 | DEBUG | pilot.util.processes | threads_aborted | aborting since the last relevant thread is about to finish [2021-07-08 23:22:25] 2021-07-09 03:22:18,762 | DEBUG | pilot.control.job | job_monitor | will proceed to set job_aborted [2021-07-08 23:22:25] 2021-07-09 03:22:18,762 | DEBUG | pilot.control.job | job_monitor | [job] job monitor thread has finished [2021-07-08 23:22:25] 2021-07-09 03:22:18,932 | INFO | pilot.workflow.generic | run | end of generic workflow (traces error code: 0) [2021-07-08 23:22:25] 2021-07-09 03:22:19,121 | INFO | root | wrap_up | traces error code: 0 [2021-07-08 23:22:25] 2021-07-09 03:22:19,122 | INFO | root | wrap_up | pilot has finished [2021-07-08 23:22:25] 2021-07-09 03:22:19,388 [wrapper] ==== pilot stdout END ==== [2021-07-08 23:22:25] 2021-07-09 03:22:19,450 [wrapper] ==== wrapper stdout RESUME ==== [2021-07-08 23:22:25] 2021-07-09 03:22:19,486 [wrapper] Pilot exit status: 0 [2021-07-08 23:22:25] 2021-07-09 03:22:24,927 [wrapper] pandaids: 5114381939 [2021-07-08 23:22:25] 2021-07-09 03:22:25,013 [wrapper] apfmon messages muted [2021-07-08 23:22:25] 2021-07-09 03:22:25,092 [wrapper] Test setup, not cleaning [2021-07-08 23:22:25] 2021-07-09 03:22:25,121 [wrapper] ==== wrapper stdout END ==== [2021-07-08 23:22:25] 2021-07-09 03:22:25,146 [wrapper] ==== wrapper stderr END ==== [2021-07-08 23:22:25] 2021-07-09 03:22:25,232 [wrapper] wrapperexiting ec=0, duration=2587 [2021-07-08 23:22:25] 2021-07-09 03:22:25,277 [wrapper] apfmon messages muted [2021-07-08 23:22:25] *** Error codes and diagnostics *** [2021-07-08 23:22:25] "exeErrorCode": 0, [2021-07-08 23:22:25] "exeErrorDiag": "", [2021-07-08 23:22:25] "pilotErrorCode": 0, [2021-07-08 23:22:25] "pilotErrorDiag": "", [2021-07-08 23:22:25] *** Listing of results directory *** [2021-07-08 23:22:25] total 51556 [2021-07-08 23:22:25] -rwx------ 1 boinc boinc 20591 Jul 8 22:32 runpilot2-wrapper.sh [2021-07-08 23:22:25] -rw-r--r-- 1 boinc boinc 3214 Jul 8 22:32 queuedata.json [2021-07-08 23:22:25] -rw-r--r-- 1 boinc boinc 334707 Jul 8 22:32 pilot2.tar.gz [2021-07-08 23:22:25] -rw-r--r-- 1 boinc boinc 107 Jul 8 22:39 wrapper_26015_x86_64-pc-linux-gnu [2021-07-08 23:22:25] -rwxr-xr-x 1 boinc boinc 6966 Jul 8 22:39 run_atlas [2021-07-08 23:22:25] -rw-r--r-- 1 boinc boinc 112 Jul 8 22:39 job.xml [2021-07-08 23:22:25] -rw-r--r-- 1 boinc boinc 6188 Jul 8 22:39 init_data.xml [2021-07-08 23:22:25] drwxrwx--x 2 boinc boinc 4096 Jul 8 22:39 shared [2021-07-08 23:22:25] -rw-r--r-- 1 boinc boinc 0 Jul 8 22:39 boinc_lockfile [2021-07-08 23:22:25] -rw-r--r-- 1 boinc boinc 37073557 Jul 8 22:39 EVNT.04972714._000021.pool.root.1 [2021-07-08 23:22:25] -rw-r--r-- 1 boinc boinc 16551 Jul 8 22:39 start_atlas.sh [2021-07-08 23:22:25] -rw-r--r-- 1 boinc boinc 344142 Jul 8 22:39 input.tar.gz [2021-07-08 23:22:25] -rw-r--r-- 1 boinc boinc 2650 Jul 8 22:39 pandaJob.out [2021-07-08 23:22:25] -rw------- 1 boinc boinc 1063624 Jul 8 22:41 agis_schedconf.cvmfs.json [2021-07-08 23:22:25] -rw------- 1 boinc boinc 1962294 Jul 8 22:41 cric_ddmendpoints.json [2021-07-08 23:22:25] drwx------ 4 boinc boinc 4096 Jul 8 22:41 pilot2 [2021-07-08 23:22:25] -rw-r--r-- 1 boinc boinc 535 Jul 8 23:19 boinc_task_state.xml [2021-07-08 23:22:25] -rw------- 1 boinc boinc 5495963 Jul 8 23:19 output.1.8867be13-dd84-4097-ba19-db4429421ff9_34007.pool.root [2021-07-08 23:22:25] -rw------- 1 boinc boinc 1018 Jul 8 23:21 memory_monitor_summary.json [2021-07-08 23:22:25] -rw------- 1 boinc boinc 166958 Jul 8 23:21 8867be13-dd84-4097-ba19-db4429421ff9_34007.1.job.log.tgz [2021-07-08 23:22:25] -rw------- 1 boinc boinc 7097 Jul 8 23:21 heartbeat.json [2021-07-08 23:22:25] -rw-r--r-- 1 boinc boinc 8192 Jul 8 23:22 boinc_mmap_file [2021-07-08 23:22:25] -rw-r--r-- 1 boinc boinc 26 Jul 8 23:22 wrapper_checkpoint.txt [2021-07-08 23:22:25] -rw------- 1 boinc boinc 7518 Jul 8 23:22 pilotlog.txt [2021-07-08 23:22:25] -rw------- 1 boinc boinc 235759 Jul 8 23:22 8867be13-dd84-4097-ba19-db4429421ff9_34007.1.job.log [2021-07-08 23:22:25] -rw------- 1 boinc boinc 536 Jul 8 23:22 output.list [2021-07-08 23:22:25] -rw-r--r-- 1 boinc boinc 9429 Jul 8 23:22 runtime_log.err [2021-07-08 23:22:25] -rw-r--r-- 1 boinc boinc 748 Jul 8 23:22 runtime_log [2021-07-08 23:22:25] -rw------- 1 boinc boinc 5918720 Jul 8 23:22 result.tar.gz [2021-07-08 23:22:25] -rw------- 1 boinc boinc 562 Jul 8 23:22 dUgMDmCVvLzn7Olcko1bjSoqABFKDmABFKDmumdXDmLmFKDmObFTdn.diag [2021-07-08 23:22:25] -rw-r--r-- 1 boinc boinc 29842 Jul 8 23:22 stderr.txt [2021-07-08 23:22:25] HITS file was successfully produced: [2021-07-08 23:22:25] -rw------- 1 boinc boinc 5495963 Jul 8 23:19 shared/HITS.pool.root.1 [2021-07-08 23:22:25] *** Contents of shared directory: *** [2021-07-08 23:22:25] total 47716 [2021-07-08 23:22:25] -rw-r--r-- 1 boinc boinc 37073557 Jul 8 22:39 ATLAS.root_0 [2021-07-08 23:22:25] -rw-r--r-- 1 boinc boinc 16551 Jul 8 22:39 start_atlas.sh [2021-07-08 23:22:25] -rw-r--r-- 1 boinc boinc 344142 Jul 8 22:39 input.tar.gz [2021-07-08 23:22:25] -rw------- 1 boinc boinc 5495963 Jul 8 23:19 HITS.pool.root.1 [2021-07-08 23:22:25] -rw------- 1 boinc boinc 5918720 Jul 8 23:22 result.tar.gz 23:22:27 (18882): run_atlas exited; CPU time 1645.065796 23:22:27 (18882): called boinc_finish(0) </stderr_txt> ]]>
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