Name | DZcLDmoWhMzn7Olcko1bjSoqABFKDmABFKDmumdXDmFrFKDmgu61Tn_0 |
Workunit | 2102687 |
Created | 11 Jul 2021, 5:49:55 UTC |
Sent | 11 Jul 2021, 5:57:10 UTC |
Report deadline | 18 Jul 2021, 5:57:10 UTC |
Received | 11 Jul 2021, 7:07:43 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 4357 |
Run time | 1 hours 8 min 35 sec |
CPU time | 29 min 50 sec |
Validate state | Valid |
Credit | 17.34 |
Device peak FLOPS | 3.04 GFLOPS |
Application version | ATLAS Simulation v1.04 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.57 GB |
Peak swap size | 2.19 GB |
Peak disk usage | 83.03 MB |
<core_client_version>7.9.3</core_client_version> <![CDATA[ <stderr_txt> 01:58:51 (152160): wrapper (7.7.26015): starting 01:58:51 (152160): wrapper: running run_atlas (--nthreads 1) [2021-07-11 01:58:51] Arguments: --nthreads 1 [2021-07-11 01:58:51] Threads: 1 [2021-07-11 01:58:51] Checking for CVMFS [2021-07-11 01:58:54] Probing /cvmfs/atlas.cern.ch... OK [2021-07-11 01:58:55] Probing /cvmfs/atlas-condb.cern.ch... OK [2021-07-11 01:58:55] Running cvmfs_config stat atlas.cern.ch [2021-07-11 01:58:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2021-07-11 01:58:56] 2.9.0.0 152635 0 24840 88151 3 1 3461897 4194305 0 130560 0 0 100.000 0 0 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 0 [2021-07-11 01:58:56] CVMFS is ok [2021-07-11 01:58:56] Efficiency of ATLAS tasks can be improved by the following measure(s): [2021-07-11 01:58:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io. [2021-07-11 01:58:56] Small home clusters do not require a local http proxy but it is suggested if [2021-07-11 01:58:56] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks. [2021-07-11 01:58:56] Further information can be found at the LHC@home message board. [2021-07-11 01:58:56] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2021-07-11 01:58:56] Checking for singularity binary... [2021-07-11 01:58:56] Using singularity found in PATH at /usr/local/bin/singularity [2021-07-11 01:58:56] Running /usr/local/bin/singularity --version [2021-07-11 01:58:56] singularity version 3.7.2+10-ga969f0f8c [2021-07-11 01:58:56] Checking singularity works with /usr/local/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2021-07-11 01:58:57] E5-2670 [2021-07-11 01:58:57] Singularity works [2021-07-11 01:58:58] Starting ATLAS job with PandaID=5116966312 [2021-07-11 01:58:58] Running command: /usr/local/bin/singularity exec --pwd /var/lib/boinc-client/slots/58 -B /cvmfs,/var /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2021-07-11 03:07:22] *** The last 200 lines of the pilot log: *** [2021-07-11 03:07:22] "name": "Sim_tf", [2021-07-11 03:07:22] "reportVersion": "1.0.0", [2021-07-11 03:07:22] "resource": { [2021-07-11 03:07:22] "cpuUnit": "seconds", [2021-07-11 03:07:22] "externalsCpuTime": 19, [2021-07-11 03:07:22] "memUnit": "kB", [2021-07-11 03:07:22] "transformCpuTime": 6, [2021-07-11 03:07:22] "wallTime": 3855 [2021-07-11 03:07:22] } [2021-07-11 03:07:22] } [2021-07-11 03:07:22] 2021-07-11 07:06:40,562 | DEBUG | pilot.user.atlas.common | update_server | no need to update logstash for this job [2021-07-11 03:07:22] 2021-07-11 07:06:40,562 | INFO | pilot.control.job | send_state | pilot will not update the server (heartbeat message will be written to file) [2021-07-11 03:07:22] 2021-07-11 07:06:40,562 | INFO | pilot.control.job | send_state | job 5116966312 has finished - writing final server update [2021-07-11 03:07:22] 2021-07-11 07:06:40,562 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics_string | job definition core count: 1 [2021-07-11 03:07:22] 2021-07-11 07:06:40,562 | WARNING | pilot.user.atlas.common | get_executor_dictionary | no such key: executor [2021-07-11 03:07:22] 2021-07-11 07:06:40,563 | WARNING | pilot.user.atlas.common | get_executor_dictionary | no such key: executor [2021-07-11 03:07:22] 2021-07-11 07:06:40,563 | INFO | pilot.user.atlas.jobmetrics | get_job_metrics_string | will not add max space = -36946523 B to job metrics [2021-07-11 03:07:22] 2021-07-11 07:06:40,564 | DEBUG | pilot.api.analytics | get_fitted_data | removing tails from data to be fitted [2021-07-11 03:07:22] 2021-07-11 07:06:40,564 | INFO | pilot.api.analytics | get_fitted_data | fitting pss+swap vs Time [2021-07-11 03:07:22] 2021-07-11 07:06:40,565 | INFO | pilot.api.analytics | get_fitted_data | current memory leak: 413.01 B/s (using 57 data points, chi2=2525339) [2021-07-11 03:07:22] 2021-07-11 07:06:40,565 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics | job metrics="actualCoreCount=5 nEvents=2 leak=413.01 chi2=2525339 eventnumber=6001" [2021-07-11 03:07:22] 2021-07-11 07:06:40,565 | INFO | pilot.control.job | get_data_structure | mean actualcorecount: 5.351852 [2021-07-11 03:07:22] 2021-07-11 07:06:40,565 | INFO | pilot.control.job | get_data_structure | total number of processed events: 2 (read) [2021-07-11 03:07:22] 2021-07-11 07:06:40,589 | INFO | pilot.util.container | execute | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2021-07-11 03:07:22] 2021-07-11 07:06:40,681 | INFO | pilot.user.atlas.utilities | get_memory_values | using path: /var/lib/boinc-client/slots/58/PanDA_Pilot-5116966312/memory_monitor_summary.json (trf n [2021-07-11 03:07:22] 2021-07-11 07:06:40,683 | DEBUG | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'Avg': {'nprocs': 3.968, 'nthreads': 4.953, 'pss': 942524.0, 'rchar': 76491.0, ' [2021-07-11 03:07:22] 2021-07-11 07:06:40,683 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard info from prmon json [2021-07-11 03:07:22] 2021-07-11 07:06:40,683 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard memory fields from prmon json [2021-07-11 03:07:22] 2021-07-11 07:06:40,684 | INFO | pilot.util.timing | timing_report | .............................. [2021-07-11 03:07:22] 2021-07-11 07:06:40,684 | INFO | pilot.util.timing | timing_report | . Timing measurements: [2021-07-11 03:07:22] 2021-07-11 07:06:40,684 | INFO | pilot.util.timing | timing_report | . get job = 0 s [2021-07-11 03:07:22] 2021-07-11 07:06:40,684 | INFO | pilot.util.timing | timing_report | . initial setup = 1 s [2021-07-11 03:07:22] 2021-07-11 07:06:40,684 | INFO | pilot.util.timing | timing_report | . payload setup = 47 s [2021-07-11 03:07:22] 2021-07-11 07:06:40,684 | INFO | pilot.util.timing | timing_report | . total setup = 48 s [2021-07-11 03:07:22] 2021-07-11 07:06:40,684 | INFO | pilot.util.timing | timing_report | . stage-in = 0 s [2021-07-11 03:07:22] 2021-07-11 07:06:40,684 | INFO | pilot.util.timing | timing_report | . payload execution = 3922 s [2021-07-11 03:07:22] 2021-07-11 07:06:40,685 | INFO | pilot.util.timing | timing_report | . stage-out = 1 s [2021-07-11 03:07:22] 2021-07-11 07:06:40,685 | INFO | pilot.util.timing | timing_report | .............................. [2021-07-11 03:07:22] 2021-07-11 07:06:40,685 | DEBUG | pilot.control.job | send_state | is_harvester_mode(args) : False [2021-07-11 03:07:22] 2021-07-11 07:06:40,686 | DEBUG | pilot.control.job | write_heartbeat_to_file | heartbeat dictionary: {'jobId': '5116966312', 'state': 'finished', 'timestamp': '2021-07-11T03:06:40 [2021-07-11 03:07:22] 2021-07-11 07:06:40,686 | DEBUG | pilot.control.job | write_heartbeat_to_file | wrote heartbeat to file /var/lib/boinc-client/slots/58/heartbeat.json [2021-07-11 03:07:22] 2021-07-11 07:06:40,686 | DEBUG | pilot.control.job | queue_monitor | job 5116966312 was dequeued from the monitored payloads queue [2021-07-11 03:07:22] 2021-07-11 07:06:40,846 | DEBUG | pilot.control.job | queue_monitor | tmp job object deleted [2021-07-11 03:07:22] 2021-07-11 07:06:41,296 | INFO | pilot.control.job | make_job_report | [2021-07-11 03:07:22] 2021-07-11 07:06:41,296 | INFO | pilot.control.job | make_job_report | job summary report [2021-07-11 03:07:22] 2021-07-11 07:06:41,297 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2021-07-11 03:07:22] 2021-07-11 07:06:41,297 | INFO | pilot.control.job | make_job_report | PanDA job id: 5116966312 [2021-07-11 03:07:22] 2021-07-11 07:06:41,297 | INFO | pilot.control.job | make_job_report | task id: NULL [2021-07-11 03:07:22] 2021-07-11 07:06:41,297 | INFO | pilot.control.job | make_job_report | errors: (none) [2021-07-11 03:07:22] 2021-07-11 07:06:41,297 | INFO | pilot.control.job | make_job_report | status: LOG_TRANSFER = DONE [2021-07-11 03:07:22] 2021-07-11 07:06:41,297 | INFO | pilot.control.job | make_job_report | pilot state: finished [2021-07-11 03:07:22] 2021-07-11 07:06:41,297 | INFO | pilot.control.job | make_job_report | transexitcode: 0 [2021-07-11 03:07:22] 2021-07-11 07:06:41,297 | INFO | pilot.control.job | make_job_report | exeerrorcode: 0 [2021-07-11 03:07:22] 2021-07-11 07:06:41,298 | INFO | pilot.control.job | make_job_report | exeerrordiag: [2021-07-11 03:07:22] 2021-07-11 07:06:41,298 | INFO | pilot.control.job | make_job_report | exitcode: 0 [2021-07-11 03:07:22] 2021-07-11 07:06:41,298 | INFO | pilot.control.job | make_job_report | exitmsg: OK [2021-07-11 03:07:22] 2021-07-11 07:06:41,298 | INFO | pilot.control.job | make_job_report | cpuconsumptiontime: 1823 s [2021-07-11 03:07:22] 2021-07-11 07:06:41,298 | INFO | pilot.control.job | make_job_report | nevents: 2 [2021-07-11 03:07:22] 2021-07-11 07:06:41,298 | INFO | pilot.control.job | make_job_report | neventsw: 0 [2021-07-11 03:07:22] 2021-07-11 07:06:41,298 | INFO | pilot.control.job | make_job_report | pid: 17561 [2021-07-11 03:07:22] 2021-07-11 07:06:41,298 | INFO | pilot.control.job | make_job_report | pgrp: 17561 [2021-07-11 03:07:22] 2021-07-11 07:06:41,299 | INFO | pilot.control.job | make_job_report | corecount: 1 [2021-07-11 03:07:22] 2021-07-11 07:06:41,299 | INFO | pilot.control.job | make_job_report | event service: False [2021-07-11 03:07:22] 2021-07-11 07:06:41,299 | INFO | pilot.control.job | make_job_report | sizes: {23716316: 3857099, 23716317: 3857264, 23720291: 3879918, 23720294: 3889558} [2021-07-11 03:07:22] 2021-07-11 07:06:41,299 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2021-07-11 03:07:22] 2021-07-11 07:06:41,299 | INFO | pilot.control.job | make_job_report | [2021-07-11 03:07:22] 2021-07-11 07:06:41,299 | DEBUG | pilot.control.job | has_job_completed | ls -lF /var/lib/boinc-client/slots/58: [2021-07-11 03:07:22] [2021-07-11 03:07:22] 2021-07-11 07:06:41,299 | INFO | pilot.util.container | execute | executing command: ls -lF /var/lib/boinc-client/slots/58 [2021-07-11 03:07:22] 2021-07-11 07:06:41,351 | DEBUG | pilot.control.job | has_job_completed | total 48596 [2021-07-11 03:07:22] -rw------- 1 boinc boinc 313353 Jul 11 03:06 9cbadc92-1bb0-4a8b-ace7-3b5ab0eb0558_44007.1.job.log [2021-07-11 03:07:22] -rw------- 1 boinc boinc 181382 Jul 11 03:06 9cbadc92-1bb0-4a8b-ace7-3b5ab0eb0558_44007.1.job.log.tgz [2021-07-11 03:07:22] -rw------- 1 boinc boinc 1068203 Jul 11 02:00 agis_schedconf.cvmfs.json [2021-07-11 03:07:22] -rw-r--r-- 1 boinc boinc 0 Jul 11 01:58 boinc_lockfile [2021-07-11 03:07:22] -rw-r--r-- 1 boinc boinc 8192 Jul 11 03:06 boinc_mmap_file [2021-07-11 03:07:22] -rw-r--r-- 1 boinc boinc 534 Jul 11 03:05 boinc_task_state.xml [2021-07-11 03:07:22] -rw------- 1 boinc boinc 1962599 Jul 11 02:00 cric_ddmendpoints.json [2021-07-11 03:07:22] -rw------- 1 boinc boinc 130 Jul 11 01:58 DZcLDmoWhMzn7Olcko1bjSoqABFKDmABFKDmumdXDmFrFKDmgu61Tn.diag [2021-07-11 03:07:22] -rw-r--r-- 1 boinc boinc 37965264 Jul 11 01:58 EVNT.04972714._000027.pool.root.1 [2021-07-11 03:07:22] -rw------- 1 boinc boinc 7096 Jul 11 03:06 heartbeat.json [2021-07-11 03:07:22] -rw-r--r-- 1 boinc boinc 6188 Jul 11 01:58 init_data.xml [2021-07-11 03:07:22] -rw-r--r-- 1 boinc boinc 344142 Jul 11 01:58 input.tar.gz [2021-07-11 03:07:22] -rw-r--r-- 1 boinc boinc 112 Jul 11 01:58 job.xml [2021-07-11 03:07:22] -rw------- 1 boinc boinc 1007 Jul 11 03:06 memory_monitor_summary.json [2021-07-11 03:07:22] -rw------- 1 boinc boinc 7133114 Jul 11 03:05 output.1.9cbadc92-1bb0-4a8b-ace7-3b5ab0eb0558_44007.pool.root [2021-07-11 03:07:22] -rw------- 1 boinc boinc 536 Jul 11 03:06 output.list [2021-07-11 03:07:22] -rw-r--r-- 1 boinc boinc 2646 Jul 11 01:58 pandaJob.out [2021-07-11 03:07:22] drwxrwx--- 2 boinc boinc 4096 Jul 11 03:06 PanDA_Pilot-5116966312/ [2021-07-11 03:07:22] drwx------ 4 boinc boinc 4096 Jul 11 02:00 pilot2/ [2021-07-11 03:07:22] -rw-r--r-- 1 boinc boinc 334707 Jul 11 01:26 pilot2.tar.gz [2021-07-11 03:07:22] -rw------- 1 boinc boinc 294384 Jul 11 03:06 pilotlog.txt [2021-07-11 03:07:22] -rw-r--r-- 1 boinc boinc 3214 Jul 11 01:49 queuedata.json [2021-07-11 03:07:22] -rwxr-xr-x 1 boinc boinc 6966 Jul 11 01:58 run_atlas* [2021-07-11 03:07:22] -rwx------ 1 boinc boinc 20591 Jul 11 01:49 runpilot2-wrapper.sh* [2021-07-11 03:07:22] -rw-r--r-- 1 boinc boinc 407 Jul 11 01:58 runtime_log [2021-07-11 03:07:22] -rw-r--r-- 1 boinc boinc 5574 Jul 11 01:59 runtime_log.err [2021-07-11 03:07:22] drwxrwx--x 2 boinc boinc 4096 Jul 11 01:58 shared/ [2021-07-11 03:07:22] -rw-r--r-- 1 boinc boinc 16551 Jul 11 01:58 start_atlas.sh [2021-07-11 03:07:22] -rw-r--r-- 1 boinc boinc 2196 Jul 11 01:58 stderr.txt [2021-07-11 03:07:22] -rw-r--r-- 1 boinc boinc 107 Jul 11 01:58 wrapper_26015_x86_64-pc-linux-gnu [2021-07-11 03:07:22] -rw-r--r-- 1 boinc boinc 26 Jul 11 03:06 wrapper_checkpoint.txt [2021-07-11 03:07:22] 2021-07-11 07:06:41,352 | INFO | pilot.util.queuehandling | queue_report | queue jobs has 0 job(s) [2021-07-11 03:07:22] 2021-07-11 07:06:41,352 | INFO | pilot.util.queuehandling | queue_report | queue payloads has 0 job(s) [2021-07-11 03:07:22] 2021-07-11 07:06:41,352 | INFO | pilot.util.queuehandling | queue_report | queue data_in has 0 job(s) [2021-07-11 03:07:22] 2021-07-11 07:06:41,352 | INFO | pilot.util.queuehandling | queue_report | queue data_out has 0 job(s) [2021-07-11 03:07:22] 2021-07-11 07:06:41,352 | INFO | pilot.util.queuehandling | queue_report | queue current_data_in has 0 job(s) [2021-07-11 03:07:22] 2021-07-11 07:06:41,352 | INFO | pilot.util.queuehandling | queue_report | queue validated_jobs has 0 job(s) [2021-07-11 03:07:22] 2021-07-11 07:06:41,352 | INFO | pilot.util.queuehandling | queue_report | queue validated_payloads has 0 job(s) [2021-07-11 03:07:22] 2021-07-11 07:06:41,353 | INFO | pilot.util.queuehandling | queue_report | queue monitored_payloads has 0 job(s) [2021-07-11 03:07:22] 2021-07-11 07:06:41,353 | INFO | pilot.util.queuehandling | queue_report | queue finished_jobs has 0 job(s) [2021-07-11 03:07:22] 2021-07-11 07:06:41,353 | INFO | pilot.util.queuehandling | queue_report | queue finished_payloads has 0 job(s) [2021-07-11 03:07:22] 2021-07-11 07:06:41,353 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_in has 1 job(s) [2021-07-11 03:07:22] 2021-07-11 07:06:41,353 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_out has 0 job(s) [2021-07-11 03:07:22] 2021-07-11 07:06:41,353 | INFO | pilot.util.queuehandling | queue_report | queue failed_jobs has 0 job(s) [2021-07-11 03:07:22] 2021-07-11 07:06:41,353 | INFO | pilot.util.queuehandling | queue_report | queue failed_payloads has 0 job(s) [2021-07-11 03:07:22] 2021-07-11 07:06:41,354 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_in has 0 job(s) [2021-07-11 03:07:22] 2021-07-11 07:06:41,354 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_out has 0 job(s) [2021-07-11 03:07:22] 2021-07-11 07:06:41,354 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobs has 0 job(s) [2021-07-11 03:07:22] 2021-07-11 07:06:41,354 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s) [2021-07-11 03:07:22] 2021-07-11 07:06:41,354 | INFO | pilot.control.job | has_job_completed | job 5116966312 has completed (purged errors) [2021-07-11 03:07:22] 2021-07-11 07:06:41,354 | INFO | pilot.util.processes | cleanup | overall cleanup function is called [2021-07-11 03:07:22] 2021-07-11 07:06:41,357 | DEBUG | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc-client/slots/58/PanDA_Pilot-5116966312 [2021-07-11 03:07:22] 2021-07-11 07:06:42,360 | INFO | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [17561] [2021-07-11 03:07:22] 2021-07-11 07:06:42,360 | INFO | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 17561 [2021-07-11 03:07:22] 2021-07-11 07:06:42,366 | INFO | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes [2021-07-11 03:07:22] 2021-07-11 07:06:43,368 | INFO | pilot.util.processes | cleanup | collected zombie processes [2021-07-11 03:07:22] 2021-07-11 07:06:43,368 | INFO | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=17561 [2021-07-11 03:07:22] 2021-07-11 07:06:43,529 | INFO | pilot.util.processes | kill_processes | process IDs to be killed: [17561] (in reverse order) [2021-07-11 03:07:22] 2021-07-11 07:06:43,636 | WARNING | pilot.util.processes | kill_processes | found no corresponding commands to process id(s) [2021-07-11 03:07:22] 2021-07-11 07:06:43,637 | INFO | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs [2021-07-11 03:07:22] 2021-07-11 07:06:43,637 | DEBUG | pilot.util.queuehandling | purge_queue | queue purged [2021-07-11 03:07:22] 2021-07-11 07:06:43,637 | INFO | pilot.control.job | retrieve | ready for new job [2021-07-11 03:07:22] 2021-07-11 07:06:43,637 | INFO | root | retrieve | pilot has finished for previous job - re-establishing logging [2021-07-11 03:07:22] 2021-07-11 07:06:43,639 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2021-07-11 03:07:22] 2021-07-11 07:06:43,639 | INFO | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 2.12.2 (1) *** [2021-07-11 03:07:22] 2021-07-11 07:06:43,639 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2021-07-11 03:07:22] 2021-07-11 07:06:43,639 | INFO | pilot.util.auxiliary | pilot_version_banner | [2021-07-11 03:07:22] 2021-07-11 07:06:43,662 | INFO | pilot.util.auxiliary | display_architecture_info | architecture information: [2021-07-11 03:07:22] 2021-07-11 07:06:44,187 | INFO | pilot.util.auxiliary | display_architecture_info | [2021-07-11 03:07:22] LSB Version: :core-4.1-amd64:core-4.1-noarch [2021-07-11 03:07:22] Distributor ID: CentOS [2021-07-11 03:07:22] Description: CentOS Linux release 7.8.2003 (Core) [2021-07-11 03:07:22] Release: 7.8.2003 [2021-07-11 03:07:22] Codename: Core [2021-07-11 03:07:22] 2021-07-11 07:06:44,187 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2021-07-11 03:07:22] 2021-07-11 07:06:44,688 | DEBUG | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc-client/slots/58 [2021-07-11 03:07:22] 2021-07-11 07:06:44,734 | INFO | pilot.util.monitoring | check_local_space | sufficient remaining disk space (52164558848 B) [2021-07-11 03:07:22] 2021-07-11 07:06:44,735 | WARNING | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job [2021-07-11 03:07:22] 2021-07-11 07:06:44,735 | DEBUG | pilot.control.job | retrieve | will not set job_aborted yet [2021-07-11 03:07:22] 2021-07-11 07:06:44,735 | DEBUG | pilot.control.job | retrieve | [job] retrieve thread has finished [2021-07-11 03:07:22] 2021-07-11 07:06:44,854 | DEBUG | pilot.control.job | create_data_payload | will not set job_aborted yet [2021-07-11 03:07:22] 2021-07-11 07:06:44,854 | DEBUG | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished [2021-07-11 03:07:22] 2021-07-11 07:06:44,936 | DEBUG | pilot.control.payload | control | payload control ending since graceful_stop has been set [2021-07-11 03:07:22] 2021-07-11 07:06:44,936 | DEBUG | pilot.control.payload | control | will not set job_aborted yet [2021-07-11 03:07:22] 2021-07-11 07:06:44,937 | DEBUG | pilot.control.payload | control | [payload] control thread has finished [2021-07-11 03:07:22] 2021-07-11 07:06:44,944 | DEBUG | pilot.control.job | control | job control ending since graceful_stop has been set [2021-07-11 03:07:22] 2021-07-11 07:06:44,944 | DEBUG | pilot.control.job | control | will not set job_aborted yet [2021-07-11 03:07:22] 2021-07-11 07:06:44,945 | DEBUG | pilot.control.job | control | [job] control thread has finished [2021-07-11 03:07:22] 2021-07-11 07:06:45,076 | DEBUG | pilot.control.payload | execute_payloads | will not set job_aborted yet [2021-07-11 03:07:22] 2021-07-11 07:06:45,076 | INFO | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished [2021-07-11 03:07:22] 2021-07-11 07:06:45,117 | DEBUG | pilot.control.payload | failed_post | will not set job_aborted yet [2021-07-11 03:07:22] 2021-07-11 07:06:45,117 | INFO | pilot.control.payload | failed_post | [payload] failed_post thread has finished [2021-07-11 03:07:22] 2021-07-11 07:06:45,252 | DEBUG | pilot.control.data | control | data control ending since graceful_stop has been set [2021-07-11 03:07:22] 2021-07-11 07:06:45,252 | DEBUG | pilot.control.data | control | will not set job_aborted yet [2021-07-11 03:07:22] 2021-07-11 07:06:45,253 | DEBUG | pilot.control.data | control | [data] control thread has finished [2021-07-11 03:07:22] 2021-07-11 07:06:45,312 | INFO | pilot.control.monitor | control | [monitor] control thread has ended [2021-07-11 03:07:22] 2021-07-11 07:06:45,616 | DEBUG | pilot.control.payload | validate_pre | will not set job_aborted yet [2021-07-11 03:07:22] 2021-07-11 07:06:45,617 | INFO | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished [2021-07-11 03:07:22] 2021-07-11 07:06:45,739 | WARNING | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration [2021-07-11 03:07:22] 2021-07-11 07:06:45,749 | DEBUG | pilot.control.payload | validate_post | will not set job_aborted yet [2021-07-11 03:07:22] 2021-07-11 07:06:45,749 | INFO | pilot.control.payload | validate_post | [payload] validate_post thread has finished [2021-07-11 03:07:22] 2021-07-11 07:06:45,834 | DEBUG | pilot.control.data | copytool_in | will not set job_aborted yet [2021-07-11 03:07:22] 2021-07-11 07:06:45,835 | DEBUG | pilot.control.data | copytool_in | [data] copytool_in thread has finished [2021-07-11 03:07:22] 2021-07-11 07:06:45,852 | WARNING | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration [2021-07-11 03:07:22] 2021-07-11 07:06:45,852 | DEBUG | pilot.control.job | queue_monitor | will not set job_aborted yet [2021-07-11 03:07:22] 2021-07-11 07:06:45,853 | DEBUG | pilot.control.job | queue_monitor | [job] queue monitor thread has finished [2021-07-11 03:07:22] 2021-07-11 07:06:46,139 | DEBUG | pilot.control.job | validate | will not set job_aborted yet [2021-07-11 03:07:22] 2021-07-11 07:06:46,140 | DEBUG | pilot.control.job | validate | [job] validate thread has finished [2021-07-11 03:07:22] 2021-07-11 07:06:46,395 | WARNING | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration [2021-07-11 03:07:22] 2021-07-11 07:06:46,740 | DEBUG | pilot.control.data | copytool_out | will not set job_aborted yet [2021-07-11 03:07:22] 2021-07-11 07:06:46,740 | DEBUG | pilot.control.data | copytool_out | [data] copytool_out thread has finished [2021-07-11 03:07:22] 2021-07-11 07:06:49,396 | DEBUG | pilot.control.data | queue_monitoring | will not set job_aborted yet [2021-07-11 03:07:22] 2021-07-11 07:06:49,396 | DEBUG | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished [2021-07-11 03:07:22] 2021-07-11 07:07:21,197 | WARNING | pilot.control.job | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 73 s) [2021-07-11 03:07:22] 2021-07-11 07:07:21,198 | DEBUG | pilot.util.processes | threads_aborted | aborting since the last relevant thread is about to finish [2021-07-11 03:07:22] 2021-07-11 07:07:21,198 | DEBUG | pilot.control.job | job_monitor | will proceed to set job_aborted [2021-07-11 03:07:22] 2021-07-11 07:07:21,198 | DEBUG | pilot.control.job | job_monitor | [job] job monitor thread has finished [2021-07-11 03:07:22] 2021-07-11 07:07:21,456 | INFO | pilot.workflow.generic | run | end of generic workflow (traces error code: 0) [2021-07-11 03:07:22] 2021-07-11 07:07:21,457 | INFO | root | wrap_up | traces error code: 0 [2021-07-11 03:07:22] 2021-07-11 07:07:21,457 | INFO | root | wrap_up | pilot has finished [2021-07-11 03:07:22] 2021-07-11 07:07:21,737 [wrapper] ==== pilot stdout END ==== [2021-07-11 03:07:22] 2021-07-11 07:07:21,761 [wrapper] ==== wrapper stdout RESUME ==== [2021-07-11 03:07:22] 2021-07-11 07:07:21,785 [wrapper] Pilot exit status: 0 [2021-07-11 03:07:22] 2021-07-11 07:07:21,953 [wrapper] pandaids: 5116966312 [2021-07-11 03:07:22] 2021-07-11 07:07:22,001 [wrapper] apfmon messages muted [2021-07-11 03:07:22] 2021-07-11 07:07:22,025 [wrapper] Test setup, not cleaning [2021-07-11 03:07:22] 2021-07-11 07:07:22,049 [wrapper] ==== wrapper stdout END ==== [2021-07-11 03:07:22] 2021-07-11 07:07:22,074 [wrapper] ==== wrapper stderr END ==== [2021-07-11 03:07:22] 2021-07-11 07:07:22,121 [wrapper] wrapperexiting ec=0, duration=4102 [2021-07-11 03:07:22] 2021-07-11 07:07:22,146 [wrapper] apfmon messages muted [2021-07-11 03:07:22] *** Error codes and diagnostics *** [2021-07-11 03:07:22] "exeErrorCode": 0, [2021-07-11 03:07:22] "exeErrorDiag": "", [2021-07-11 03:07:22] "pilotErrorCode": 0, [2021-07-11 03:07:22] "pilotErrorDiag": "", [2021-07-11 03:07:22] *** Listing of results directory *** [2021-07-11 03:07:22] total 55836 [2021-07-11 03:07:22] -rw-r--r-- 1 boinc boinc 334707 Jul 11 01:26 pilot2.tar.gz [2021-07-11 03:07:22] -rwx------ 1 boinc boinc 20591 Jul 11 01:49 runpilot2-wrapper.sh [2021-07-11 03:07:22] -rw-r--r-- 1 boinc boinc 3214 Jul 11 01:49 queuedata.json [2021-07-11 03:07:22] -rw-r--r-- 1 boinc boinc 107 Jul 11 01:58 wrapper_26015_x86_64-pc-linux-gnu [2021-07-11 03:07:22] -rwxr-xr-x 1 boinc boinc 6966 Jul 11 01:58 run_atlas [2021-07-11 03:07:22] -rw-r--r-- 1 boinc boinc 112 Jul 11 01:58 job.xml [2021-07-11 03:07:22] drwxrwx--x 2 boinc boinc 4096 Jul 11 01:58 shared [2021-07-11 03:07:22] -rw-r--r-- 1 boinc boinc 6188 Jul 11 01:58 init_data.xml [2021-07-11 03:07:22] -rw-r--r-- 1 boinc boinc 0 Jul 11 01:58 boinc_lockfile [2021-07-11 03:07:22] -rw-r--r-- 1 boinc boinc 16551 Jul 11 01:58 start_atlas.sh [2021-07-11 03:07:22] -rw-r--r-- 1 boinc boinc 344142 Jul 11 01:58 input.tar.gz [2021-07-11 03:07:22] -rw-r--r-- 1 boinc boinc 37965264 Jul 11 01:58 EVNT.04972714._000027.pool.root.1 [2021-07-11 03:07:22] -rw-r--r-- 1 boinc boinc 2646 Jul 11 01:58 pandaJob.out [2021-07-11 03:07:22] -rw------- 1 boinc boinc 1068203 Jul 11 02:00 agis_schedconf.cvmfs.json [2021-07-11 03:07:22] -rw------- 1 boinc boinc 1962599 Jul 11 02:00 cric_ddmendpoints.json [2021-07-11 03:07:22] drwx------ 4 boinc boinc 4096 Jul 11 02:00 pilot2 [2021-07-11 03:07:22] -rw------- 1 boinc boinc 7133114 Jul 11 03:05 output.1.9cbadc92-1bb0-4a8b-ace7-3b5ab0eb0558_44007.pool.root [2021-07-11 03:07:22] -rw-r--r-- 1 boinc boinc 534 Jul 11 03:05 boinc_task_state.xml [2021-07-11 03:07:22] -rw------- 1 boinc boinc 1007 Jul 11 03:06 memory_monitor_summary.json [2021-07-11 03:07:22] -rw------- 1 boinc boinc 181382 Jul 11 03:06 9cbadc92-1bb0-4a8b-ace7-3b5ab0eb0558_44007.1.job.log.tgz [2021-07-11 03:07:22] -rw------- 1 boinc boinc 7096 Jul 11 03:06 heartbeat.json [2021-07-11 03:07:22] -rw-r--r-- 1 boinc boinc 8192 Jul 11 03:06 boinc_mmap_file [2021-07-11 03:07:22] -rw-r--r-- 1 boinc boinc 26 Jul 11 03:06 wrapper_checkpoint.txt [2021-07-11 03:07:22] -rw------- 1 boinc boinc 7363 Jul 11 03:07 pilotlog.txt [2021-07-11 03:07:22] -rw------- 1 boinc boinc 328024 Jul 11 03:07 9cbadc92-1bb0-4a8b-ace7-3b5ab0eb0558_44007.1.job.log [2021-07-11 03:07:22] -rw------- 1 boinc boinc 536 Jul 11 03:07 output.list [2021-07-11 03:07:22] -rw-r--r-- 1 boinc boinc 9429 Jul 11 03:07 runtime_log.err [2021-07-11 03:07:22] -rw-r--r-- 1 boinc boinc 748 Jul 11 03:07 runtime_log [2021-07-11 03:07:22] -rw------- 1 boinc boinc 7659520 Jul 11 03:07 result.tar.gz [2021-07-11 03:07:22] -rw------- 1 boinc boinc 562 Jul 11 03:07 DZcLDmoWhMzn7Olcko1bjSoqABFKDmABFKDmumdXDmFrFKDmgu61Tn.diag [2021-07-11 03:07:22] -rw-r--r-- 1 boinc boinc 29692 Jul 11 03:07 stderr.txt [2021-07-11 03:07:22] HITS file was successfully produced: [2021-07-11 03:07:22] -rw------- 1 boinc boinc 7133114 Jul 11 03:05 shared/HITS.pool.root.1 [2021-07-11 03:07:22] *** Contents of shared directory: *** [2021-07-11 03:07:22] total 51884 [2021-07-11 03:07:22] -rw-r--r-- 1 boinc boinc 16551 Jul 11 01:58 start_atlas.sh [2021-07-11 03:07:22] -rw-r--r-- 1 boinc boinc 344142 Jul 11 01:58 input.tar.gz [2021-07-11 03:07:22] -rw-r--r-- 1 boinc boinc 37965264 Jul 11 01:58 ATLAS.root_0 [2021-07-11 03:07:22] -rw------- 1 boinc boinc 7133114 Jul 11 03:05 HITS.pool.root.1 [2021-07-11 03:07:22] -rw------- 1 boinc boinc 7659520 Jul 11 03:07 result.tar.gz 03:07:24 (152160): run_atlas exited; CPU time 1790.958580 03:07:24 (152160): called boinc_finish(0) </stderr_txt> ]]>
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