Name 32SMDma1vMzn7Olcko1bjSoqABFKDmABFKDmumdXDmRsFKDmCCiQ9m_0
Workunit 2102882
Created 11 Jul 2021, 21:21:19 UTC
Sent 11 Jul 2021, 21:24:19 UTC
Report deadline 18 Jul 2021, 21:24:19 UTC
Received 11 Jul 2021, 22:15:20 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4357
Run time 33 min 18 sec
CPU time 5 min 11 sec
Validate state Valid
Credit 8.48
Device peak FLOPS 3.04 GFLOPS
Application version ATLAS Simulation v1.04 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 2.60 GB
Peak swap size 30.46 GB
Peak disk usage 79.30 MB

Stderr output

<core_client_version>7.9.3</core_client_version>
<![CDATA[
<stderr_txt>
17:41:45 (17044): wrapper (7.7.26015): starting
17:41:45 (17044): wrapper: running run_atlas (--nthreads 1)
[2021-07-11 17:41:45] Arguments: --nthreads 1
[2021-07-11 17:41:45] Threads: 1
[2021-07-11 17:41:45] Checking for CVMFS
[2021-07-11 17:41:51] Probing /cvmfs/atlas.cern.ch... OK
[2021-07-11 17:41:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2021-07-11 17:41:52] Running cvmfs_config stat atlas.cern.ch
[2021-07-11 17:41:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2021-07-11 17:41:53] 2.9.0.0 17728 0 24724 88191 3 1 3640242 4194304 0 130560 0 0 0.000 529 236 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 0
[2021-07-11 17:41:53] CVMFS is ok
[2021-07-11 17:41:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2021-07-11 17:41:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2021-07-11 17:41:53] Small home clusters do not require a local http proxy but it is suggested if
[2021-07-11 17:41:53] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2021-07-11 17:41:53] Further information can be found at the LHC@home message board.
[2021-07-11 17:41:53] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2021-07-11 17:41:53] Checking for singularity binary...
[2021-07-11 17:41:53] Using singularity found in PATH at /usr/local/bin/singularity
[2021-07-11 17:41:53] Running /usr/local/bin/singularity --version
[2021-07-11 17:41:53] singularity version 3.7.2+10-ga969f0f8c
[2021-07-11 17:41:53] Checking singularity works with /usr/local/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2021-07-11 17:41:55] E5-2670
[2021-07-11 17:41:55] Singularity works
[2021-07-11 17:41:55] Starting ATLAS job with PandaID=5117592129
[2021-07-11 17:41:55] Running command: /usr/local/bin/singularity exec --pwd /var/lib/boinc-client/slots/37 -B /cvmfs,/var /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2021-07-11 18:15:01]  *** The last 200 lines of the pilot log: ***
[2021-07-11 18:15:01]         "wallTime": 3.57
[2021-07-11 18:15:01]       }, 
[2021-07-11 18:15:01]       "transformSetup": {
[2021-07-11 18:15:01]         "cpuTime": 0.0, 
[2021-07-11 18:15:01]         "wallTime": 0.01
[2021-07-11 18:15:01]       }, 
[2021-07-11 18:15:01]       "trfPredata": null, 
[2021-07-11 18:15:01]       "wallTime": 1731.02
[2021-07-11 18:15:01]     }
[2021-07-11 18:15:01]   }
[2021-07-11 18:15:01] }
[2021-07-11 18:15:01] 2021-07-11 22:14:21,729 | DEBUG    | pilot.user.atlas.common          | update_server             | no need to update logstash for this job
[2021-07-11 18:15:01] 2021-07-11 22:14:21,729 | INFO     | pilot.control.job                | send_state                | pilot will not update the server (heartbeat message will be written to file)
[2021-07-11 18:15:01] 2021-07-11 22:14:21,729 | INFO     | pilot.control.job                | send_state                | job 5117592129 has finished - writing final server update
[2021-07-11 18:15:01] 2021-07-11 22:14:21,729 | DEBUG    | pilot.user.atlas.jobmetrics      | get_job_metrics_string    | job definition core count: 1
[2021-07-11 18:15:01] 2021-07-11 22:14:21,730 | INFO     | pilot.user.atlas.jobmetrics      | get_job_metrics_string    | will not add max space = -37002704 B to job metrics
[2021-07-11 18:15:01] 2021-07-11 22:14:21,730 | DEBUG    | pilot.api.analytics              | get_fitted_data           | removing tails from data to be fitted
[2021-07-11 18:15:01] 2021-07-11 22:14:21,731 | INFO     | pilot.api.analytics              | get_fitted_data           | fitting pss+swap vs Time
[2021-07-11 18:15:01] 2021-07-11 22:14:21,731 | INFO     | pilot.api.analytics              | get_fitted_data           | current memory leak: 690.80 B/s (using 23 data points, chi2=864650)
[2021-07-11 18:15:01] 2021-07-11 22:14:21,731 | DEBUG    | pilot.user.atlas.jobmetrics      | get_job_metrics           | job metrics="actualCoreCount=1 nEvents=2 dbTime=195.97 dbData=4274899 leak=690.80 chi2=864650 eventn
[2021-07-11 18:15:01] 2021-07-11 22:14:21,731 | INFO     | pilot.control.job                | get_data_structure        | mean actualcorecount: 4.200000
[2021-07-11 18:15:01] 2021-07-11 22:14:21,732 | INFO     | pilot.control.job                | get_data_structure        | total number of processed events: 2 (read)
[2021-07-11 18:15:01] 2021-07-11 22:14:21,750 | INFO     | pilot.util.container             | execute                   | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2021-07-11 18:15:01] 2021-07-11 22:14:21,830 | INFO     | pilot.user.atlas.utilities       | get_memory_values         | using path: /var/lib/boinc-client/slots/37/PanDA_Pilot-5117592129/memory_monitor_summary.json (trf n
[2021-07-11 18:15:01] 2021-07-11 22:14:21,832 | DEBUG    | pilot.user.atlas.utilities       | get_memory_monitor_info   | summary_dictionary={'Avg': {'nprocs': 4.799, 'nthreads': 5.7, 'pss': 1162052.0, 'rchar': 303387.0, '
[2021-07-11 18:15:01] 2021-07-11 22:14:21,832 | INFO     | pilot.user.atlas.utilities       | get_memory_monitor_info   | extracted standard info from prmon json
[2021-07-11 18:15:01] 2021-07-11 22:14:21,832 | INFO     | pilot.user.atlas.utilities       | get_memory_monitor_info   | extracted standard memory fields from prmon json
[2021-07-11 18:15:01] 2021-07-11 22:14:21,832 | INFO     | pilot.util.timing                | timing_report             | ..............................
[2021-07-11 18:15:01] 2021-07-11 22:14:21,832 | INFO     | pilot.util.timing                | timing_report             | . Timing measurements:
[2021-07-11 18:15:01] 2021-07-11 22:14:21,832 | INFO     | pilot.util.timing                | timing_report             | . get job = 0 s
[2021-07-11 18:15:01] 2021-07-11 22:14:21,833 | INFO     | pilot.util.timing                | timing_report             | . initial setup = 1 s
[2021-07-11 18:15:01] 2021-07-11 22:14:21,833 | INFO     | pilot.util.timing                | timing_report             | . payload setup = 43 s
[2021-07-11 18:15:01] 2021-07-11 22:14:21,833 | INFO     | pilot.util.timing                | timing_report             | . total setup = 44 s
[2021-07-11 18:15:01] 2021-07-11 22:14:21,833 | INFO     | pilot.util.timing                | timing_report             | . stage-in = 0 s
[2021-07-11 18:15:01] 2021-07-11 22:14:21,833 | INFO     | pilot.util.timing                | timing_report             | . payload execution = 1810 s
[2021-07-11 18:15:01] 2021-07-11 22:14:21,833 | INFO     | pilot.util.timing                | timing_report             | . stage-out = 1 s
[2021-07-11 18:15:01] 2021-07-11 22:14:21,833 | INFO     | pilot.util.timing                | timing_report             | ..............................
[2021-07-11 18:15:01] 2021-07-11 22:14:21,834 | DEBUG    | pilot.control.job                | send_state                | is_harvester_mode(args) : False
[2021-07-11 18:15:01] 2021-07-11 22:14:21,834 | DEBUG    | pilot.control.job                | write_heartbeat_to_file   | heartbeat dictionary: {'jobId': '5117592129', 'state': 'finished', 'timestamp': '2021-07-11T18:14:21
[2021-07-11 18:15:01] 2021-07-11 22:14:21,835 | DEBUG    | pilot.control.job                | write_heartbeat_to_file   | wrote heartbeat to file /var/lib/boinc-client/slots/37/heartbeat.json
[2021-07-11 18:15:01] 2021-07-11 22:14:21,835 | DEBUG    | pilot.control.job                | queue_monitor             | job 5117592129 was dequeued from the monitored payloads queue
[2021-07-11 18:15:01] 2021-07-11 22:14:21,998 | DEBUG    | pilot.control.job                | queue_monitor             | tmp job object deleted
[2021-07-11 18:15:01] 2021-07-11 22:14:21,998 | INFO     | pilot.control.job                | make_job_report           | 
[2021-07-11 18:15:01] 2021-07-11 22:14:21,999 | INFO     | pilot.control.job                | make_job_report           | job summary report
[2021-07-11 18:15:01] 2021-07-11 22:14:21,999 | INFO     | pilot.control.job                | make_job_report           | --------------------------------------------------
[2021-07-11 18:15:01] 2021-07-11 22:14:21,999 | INFO     | pilot.control.job                | make_job_report           | PanDA job id: 5117592129
[2021-07-11 18:15:01] 2021-07-11 22:14:21,999 | INFO     | pilot.control.job                | make_job_report           | task id: NULL
[2021-07-11 18:15:01] 2021-07-11 22:14:21,999 | INFO     | pilot.control.job                | make_job_report           | errors: (none)
[2021-07-11 18:15:01] 2021-07-11 22:14:22,000 | INFO     | pilot.control.job                | make_job_report           | status: LOG_TRANSFER = DONE 
[2021-07-11 18:15:01] 2021-07-11 22:14:22,000 | INFO     | pilot.control.job                | make_job_report           | pilot state: finished 
[2021-07-11 18:15:01] 2021-07-11 22:14:22,000 | INFO     | pilot.control.job                | make_job_report           | transexitcode: 0
[2021-07-11 18:15:01] 2021-07-11 22:14:22,000 | INFO     | pilot.control.job                | make_job_report           | exeerrorcode: 0
[2021-07-11 18:15:01] 2021-07-11 22:14:22,000 | INFO     | pilot.control.job                | make_job_report           | exeerrordiag: 
[2021-07-11 18:15:01] 2021-07-11 22:14:22,000 | INFO     | pilot.control.job                | make_job_report           | exitcode: 0
[2021-07-11 18:15:01] 2021-07-11 22:14:22,000 | INFO     | pilot.control.job                | make_job_report           | exitmsg: OK
[2021-07-11 18:15:01] 2021-07-11 22:14:22,001 | INFO     | pilot.control.job                | make_job_report           | cpuconsumptiontime: 334 s
[2021-07-11 18:15:01] 2021-07-11 22:14:22,001 | INFO     | pilot.control.job                | make_job_report           | nevents: 2
[2021-07-11 18:15:01] 2021-07-11 22:14:22,001 | INFO     | pilot.control.job                | make_job_report           | neventsw: 0
[2021-07-11 18:15:01] 2021-07-11 22:14:22,001 | INFO     | pilot.control.job                | make_job_report           | pid: 36655
[2021-07-11 18:15:01] 2021-07-11 22:14:22,001 | INFO     | pilot.control.job                | make_job_report           | pgrp: 36655
[2021-07-11 18:15:01] 2021-07-11 22:14:22,001 | INFO     | pilot.control.job                | make_job_report           | corecount: 1
[2021-07-11 18:15:01] 2021-07-11 22:14:22,001 | INFO     | pilot.control.job                | make_job_report           | event service: False
[2021-07-11 18:15:01] 2021-07-11 22:14:22,002 | INFO     | pilot.control.job                | make_job_report           | sizes: {23772894: 3857038, 23772895: 3857175, 23774752: 3880358, 23774753: 3880357, 23774755: 389010
[2021-07-11 18:15:01] 2021-07-11 22:14:22,002 | INFO     | pilot.control.job                | make_job_report           | --------------------------------------------------
[2021-07-11 18:15:01] 2021-07-11 22:14:22,002 | INFO     | pilot.control.job                | make_job_report           | 
[2021-07-11 18:15:01] 2021-07-11 22:14:22,002 | DEBUG    | pilot.control.job                | has_job_completed         | ls -lF /var/lib/boinc-client/slots/37:
[2021-07-11 18:15:01] 
[2021-07-11 18:15:01] 2021-07-11 22:14:22,002 | INFO     | pilot.util.container             | execute                   | executing command: ls -lF /var/lib/boinc-client/slots/37
[2021-07-11 18:15:01] 2021-07-11 22:14:22,057 | DEBUG    | pilot.control.job                | has_job_completed         | total 43136
[2021-07-11 18:15:01] -rw------- 1 boinc boinc      130 Jul 11 17:41 32SMDma1vMzn7Olcko1bjSoqABFKDmABFKDmumdXDmRsFKDmCCiQ9m.diag
[2021-07-11 18:15:01] -rw------- 1 boinc boinc   201823 Jul 11 18:14 9dc4c0c3-be08-4489-8b69-27ff4cb8d036_5000.1.job.log
[2021-07-11 18:15:01] -rw------- 1 boinc boinc   193364 Jul 11 18:14 9dc4c0c3-be08-4489-8b69-27ff4cb8d036_5000.1.job.log.tgz
[2021-07-11 18:15:01] -rw------- 1 boinc boinc  1068211 Jul 11 17:43 agis_schedconf.cvmfs.json
[2021-07-11 18:15:01] -rw-r--r-- 1 boinc boinc        0 Jul 11 17:41 boinc_lockfile
[2021-07-11 18:15:01] -rw-r--r-- 1 boinc boinc     8192 Jul 11 18:13 boinc_mmap_file
[2021-07-11 18:15:01] -rw-r--r-- 1 boinc boinc      534 Jul 11 18:14 boinc_task_state.xml
[2021-07-11 18:15:01] -rw------- 1 boinc boinc  1962599 Jul 11 17:43 cric_ddmendpoints.json
[2021-07-11 18:15:01] -rw-r--r-- 1 boinc boinc 37965264 Jul 11 17:41 EVNT.04972714._000027.pool.root.1
[2021-07-11 18:15:01] -rw------- 1 boinc boinc     7484 Jul 11 18:14 heartbeat.json
[2021-07-11 18:15:01] -rw-r--r-- 1 boinc boinc     6188 Jul 11 17:41 init_data.xml
[2021-07-11 18:15:01] -rw-r--r-- 1 boinc boinc   344157 Jul 11 17:41 input.tar.gz
[2021-07-11 18:15:01] -rw-r--r-- 1 boinc boinc      112 Jul 11 17:41 job.xml
[2021-07-11 18:15:01] -rw------- 1 boinc boinc     1010 Jul 11 18:14 memory_monitor_summary.json
[2021-07-11 18:15:01] -rw------- 1 boinc boinc  1750557 Jul 11 18:13 output.1.9dc4c0c3-be08-4489-8b69-27ff4cb8d036_5000.pool.root
[2021-07-11 18:15:01] -rw------- 1 boinc boinc      532 Jul 11 18:14 output.list
[2021-07-11 18:15:01] -rw-r--r-- 1 boinc boinc     2608 Jul 11 17:41 pandaJob.out
[2021-07-11 18:15:01] drwxrwx--- 2 boinc boinc     4096 Jul 11 18:14 PanDA_Pilot-5117592129/
[2021-07-11 18:15:01] drwx------ 4 boinc boinc     4096 Jul 11 17:43 pilot2/
[2021-07-11 18:15:01] -rw-r--r-- 1 boinc boinc   334707 Jul 11 16:25 pilot2.tar.gz
[2021-07-11 18:15:01] -rw------- 1 boinc boinc   182853 Jul 11 18:14 pilotlog.txt
[2021-07-11 18:15:01] -rw-r--r-- 1 boinc boinc     3214 Jul 11 17:21 queuedata.json
[2021-07-11 18:15:01] -rwxr-xr-x 1 boinc boinc     6966 Jul 11 17:41 run_atlas*
[2021-07-11 18:15:01] -rwx------ 1 boinc boinc    20591 Jul 11 17:18 runpilot2-wrapper.sh*
[2021-07-11 18:15:01] -rw-r--r-- 1 boinc boinc      407 Jul 11 17:41 runtime_log
[2021-07-11 18:15:01] -rw-r--r-- 1 boinc boinc     5572 Jul 11 17:41 runtime_log.err
[2021-07-11 18:15:01] drwxrwx--x 2 boinc boinc     4096 Jul 11 17:41 shared/
[2021-07-11 18:15:01] -rw-r--r-- 1 boinc boinc    16547 Jul 11 17:41 start_atlas.sh
[2021-07-11 18:15:01] -rw-r--r-- 1 boinc boinc     2195 Jul 11 17:41 stderr.txt
[2021-07-11 18:15:01] -rw-r--r-- 1 boinc boinc      107 Jul 11 17:41 wrapper_26015_x86_64-pc-linux-gnu
[2021-07-11 18:15:01] -rw-r--r-- 1 boinc boinc       25 Jul 11 18:14 wrapper_checkpoint.txt
[2021-07-11 18:15:01] 2021-07-11 22:14:22,057 | INFO     | pilot.util.queuehandling         | queue_report              | queue jobs has 0 job(s)
[2021-07-11 18:15:01] 2021-07-11 22:14:22,058 | INFO     | pilot.util.queuehandling         | queue_report              | queue payloads has 0 job(s)
[2021-07-11 18:15:01] 2021-07-11 22:14:22,058 | INFO     | pilot.util.queuehandling         | queue_report              | queue data_in has 0 job(s)
[2021-07-11 18:15:01] 2021-07-11 22:14:22,058 | INFO     | pilot.util.queuehandling         | queue_report              | queue data_out has 0 job(s)
[2021-07-11 18:15:01] 2021-07-11 22:14:22,058 | INFO     | pilot.util.queuehandling         | queue_report              | queue current_data_in has 0 job(s)
[2021-07-11 18:15:01] 2021-07-11 22:14:22,058 | INFO     | pilot.util.queuehandling         | queue_report              | queue validated_jobs has 0 job(s)
[2021-07-11 18:15:01] 2021-07-11 22:14:22,058 | INFO     | pilot.util.queuehandling         | queue_report              | queue validated_payloads has 0 job(s)
[2021-07-11 18:15:01] 2021-07-11 22:14:22,059 | INFO     | pilot.util.queuehandling         | queue_report              | queue monitored_payloads has 0 job(s)
[2021-07-11 18:15:01] 2021-07-11 22:14:22,059 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_jobs has 0 job(s)
[2021-07-11 18:15:01] 2021-07-11 22:14:22,059 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_payloads has 0 job(s)
[2021-07-11 18:15:01] 2021-07-11 22:14:22,059 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_data_in has 1 job(s)
[2021-07-11 18:15:01] 2021-07-11 22:14:22,059 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_data_out has 0 job(s)
[2021-07-11 18:15:01] 2021-07-11 22:14:22,059 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_jobs has 0 job(s)
[2021-07-11 18:15:01] 2021-07-11 22:14:22,060 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_payloads has 0 job(s)
[2021-07-11 18:15:01] 2021-07-11 22:14:22,060 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_data_in has 0 job(s)
[2021-07-11 18:15:01] 2021-07-11 22:14:22,060 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_data_out has 0 job(s)
[2021-07-11 18:15:01] 2021-07-11 22:14:22,060 | INFO     | pilot.util.queuehandling         | queue_report              | queue completed_jobs has 0 job(s)
[2021-07-11 18:15:01] 2021-07-11 22:14:22,060 | INFO     | pilot.util.queuehandling         | queue_report              | queue completed_jobids has 1 job(s)
[2021-07-11 18:15:01] 2021-07-11 22:14:22,060 | INFO     | pilot.control.job                | has_job_completed         | job 5117592129 has completed (purged errors)
[2021-07-11 18:15:01] 2021-07-11 22:14:22,061 | INFO     | pilot.util.processes             | cleanup                   | overall cleanup function is called
[2021-07-11 18:15:01] 2021-07-11 22:14:22,064 | DEBUG    | pilot.util.processes             | cleanup                   | work directory was removed: /var/lib/boinc-client/slots/37/PanDA_Pilot-5117592129
[2021-07-11 18:15:01] 2021-07-11 22:14:23,069 | INFO     | pilot.info.jobdata               | collect_zombies           | --- collectZombieJob: --- 10, [36655]
[2021-07-11 18:15:01] 2021-07-11 22:14:23,069 | INFO     | pilot.info.jobdata               | collect_zombies           | zombie collector trying to kill pid 36655
[2021-07-11 18:15:01] 2021-07-11 22:14:23,069 | INFO     | pilot.info.jobdata               | collect_zombies           | harmless exception when collecting zombies: [Errno 10] No child processes
[2021-07-11 18:15:01] 2021-07-11 22:14:24,072 | INFO     | pilot.util.processes             | cleanup                   | collected zombie processes
[2021-07-11 18:15:01] 2021-07-11 22:14:24,072 | INFO     | pilot.util.processes             | cleanup                   | will now attempt to kill all subprocesses of pid=36655
[2021-07-11 18:15:01] 2021-07-11 22:14:24,196 | INFO     | pilot.util.processes             | kill_processes            | process IDs to be killed: [36655] (in reverse order)
[2021-07-11 18:15:01] 2021-07-11 22:14:24,292 | WARNING  | pilot.util.processes             | kill_processes            | found no corresponding commands to process id(s)
[2021-07-11 18:15:01] 2021-07-11 22:14:24,293 | INFO     | pilot.util.processes             | kill_orphans              | Do not look for orphan processes in BOINC jobs
[2021-07-11 18:15:01] 2021-07-11 22:14:24,293 | DEBUG    | pilot.util.queuehandling         | purge_queue               | queue purged
[2021-07-11 18:15:01] 2021-07-11 22:14:24,293 | INFO     | pilot.control.job                | retrieve                  | ready for new job
[2021-07-11 18:15:01] 2021-07-11 22:14:24,293 | INFO     | root                             | retrieve                  | pilot has finished for previous job - re-establishing logging
[2021-07-11 18:15:01] 2021-07-11 22:14:24,294 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ****************************************
[2021-07-11 18:15:01] 2021-07-11 22:14:24,295 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ***  PanDA Pilot version 2.12.2 (1)  ***
[2021-07-11 18:15:01] 2021-07-11 22:14:24,295 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ****************************************
[2021-07-11 18:15:01] 2021-07-11 22:14:24,295 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | 
[2021-07-11 18:15:01] 2021-07-11 22:14:24,313 | INFO     | pilot.util.auxiliary             | display_architecture_info | architecture information:
[2021-07-11 18:15:01] 2021-07-11 22:14:24,823 | INFO     | pilot.util.auxiliary             | display_architecture_info | 
[2021-07-11 18:15:01] LSB Version:	:core-4.1-amd64:core-4.1-noarch
[2021-07-11 18:15:01] Distributor ID:	CentOS
[2021-07-11 18:15:01] Description:	CentOS Linux release 7.8.2003 (Core)
[2021-07-11 18:15:01] Release:	7.8.2003
[2021-07-11 18:15:01] Codename:	Core
[2021-07-11 18:15:01] 2021-07-11 22:14:24,824 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ****************************************
[2021-07-11 18:15:01] 2021-07-11 22:14:25,327 | DEBUG    | pilot.util.monitoring            | check_local_space         | checking local space on /var/lib/boinc-client/slots/37
[2021-07-11 18:15:01] 2021-07-11 22:14:25,363 | INFO     | pilot.util.monitoring            | check_local_space         | sufficient remaining disk space (47948234752 B)
[2021-07-11 18:15:01] 2021-07-11 22:14:25,364 | WARNING  | pilot.control.job                | proceed_with_getjob       | since timefloor is set to 0, pilot was only allowed to run one job
[2021-07-11 18:15:01] 2021-07-11 22:14:25,364 | DEBUG    | pilot.control.job                | retrieve                  | will not set job_aborted yet
[2021-07-11 18:15:01] 2021-07-11 22:14:25,364 | WARNING  | pilot.util.common                | should_abort              | data:copytool_out:received graceful stop - abort after this iteration
[2021-07-11 18:15:01] 2021-07-11 22:14:25,365 | WARNING  | pilot.control.monitor            | control                   | aborting monitor loop since graceful_stop has been set
[2021-07-11 18:15:01] 2021-07-11 22:14:25,365 | DEBUG    | pilot.control.job                | retrieve                  | [job] retrieve thread has finished
[2021-07-11 18:15:01] 2021-07-11 22:14:25,365 | INFO     | pilot.control.monitor            | control                   | [monitor] control thread has ended
[2021-07-11 18:15:01] 2021-07-11 22:14:25,560 | DEBUG    | pilot.control.data               | control                   | data control ending since graceful_stop has been set
[2021-07-11 18:15:01] 2021-07-11 22:14:25,560 | DEBUG    | pilot.control.data               | control                   | will not set job_aborted yet
[2021-07-11 18:15:01] 2021-07-11 22:14:25,560 | DEBUG    | pilot.control.data               | control                   | [data] control thread has finished
[2021-07-11 18:15:01] 2021-07-11 22:14:25,648 | DEBUG    | pilot.control.payload            | validate_post             | will not set job_aborted yet
[2021-07-11 18:15:01] 2021-07-11 22:14:25,648 | INFO     | pilot.control.payload            | validate_post             | [payload] validate_post thread has finished
[2021-07-11 18:15:01] 2021-07-11 22:14:25,668 | DEBUG    | pilot.control.job                | control                   | job control ending since graceful_stop has been set
[2021-07-11 18:15:01] 2021-07-11 22:14:25,668 | DEBUG    | pilot.control.job                | control                   | will not set job_aborted yet
[2021-07-11 18:15:01] 2021-07-11 22:14:25,669 | DEBUG    | pilot.control.job                | control                   | [job] control thread has finished
[2021-07-11 18:15:01] 2021-07-11 22:14:25,784 | DEBUG    | pilot.control.payload            | validate_pre              | will not set job_aborted yet
[2021-07-11 18:15:01] 2021-07-11 22:14:25,784 | INFO     | pilot.control.payload            | validate_pre              | [payload] validate_pre thread has finished
[2021-07-11 18:15:01] 2021-07-11 22:14:25,915 | DEBUG    | pilot.control.data               | copytool_in               | will not set job_aborted yet
[2021-07-11 18:15:01] 2021-07-11 22:14:25,916 | DEBUG    | pilot.control.data               | copytool_in               | [data] copytool_in thread has finished
[2021-07-11 18:15:01] 2021-07-11 22:14:26,224 | DEBUG    | pilot.control.payload            | control                   | payload control ending since graceful_stop has been set
[2021-07-11 18:15:01] 2021-07-11 22:14:26,224 | DEBUG    | pilot.control.payload            | control                   | will not set job_aborted yet
[2021-07-11 18:15:01] 2021-07-11 22:14:26,225 | DEBUG    | pilot.control.payload            | control                   | [payload] control thread has finished
[2021-07-11 18:15:01] 2021-07-11 22:14:26,339 | DEBUG    | pilot.control.payload            | failed_post               | will not set job_aborted yet
[2021-07-11 18:15:01] 2021-07-11 22:14:26,340 | INFO     | pilot.control.payload            | failed_post               | [payload] failed_post thread has finished
[2021-07-11 18:15:01] 2021-07-11 22:14:26,349 | DEBUG    | pilot.control.job                | validate                  | will not set job_aborted yet
[2021-07-11 18:15:01] 2021-07-11 22:14:26,349 | DEBUG    | pilot.control.job                | validate                  | [job] validate thread has finished
[2021-07-11 18:15:01] 2021-07-11 22:14:26,365 | DEBUG    | pilot.control.data               | copytool_out              | will not set job_aborted yet
[2021-07-11 18:15:01] 2021-07-11 22:14:26,365 | DEBUG    | pilot.control.data               | copytool_out              | [data] copytool_out thread has finished
[2021-07-11 18:15:01] 2021-07-11 22:14:26,504 | DEBUG    | pilot.control.job                | create_data_payload       | will not set job_aborted yet
[2021-07-11 18:15:01] 2021-07-11 22:14:26,505 | DEBUG    | pilot.control.job                | create_data_payload       | [job] create_data_payload thread has finished
[2021-07-11 18:15:01] 2021-07-11 22:14:26,600 | DEBUG    | pilot.control.payload            | execute_payloads          | will not set job_aborted yet
[2021-07-11 18:15:01] 2021-07-11 22:14:26,601 | INFO     | pilot.control.payload            | execute_payloads          | [payload] execute_payloads thread has finished
[2021-07-11 18:15:01] 2021-07-11 22:14:27,004 | WARNING  | pilot.util.common                | should_abort              | job:queue_monitor:received graceful stop - abort after this iteration
[2021-07-11 18:15:01] 2021-07-11 22:14:27,004 | DEBUG    | pilot.control.job                | queue_monitor             | will not set job_aborted yet
[2021-07-11 18:15:01] 2021-07-11 22:14:27,005 | DEBUG    | pilot.control.job                | queue_monitor             | [job] queue monitor thread has finished
[2021-07-11 18:15:01] 2021-07-11 22:14:27,732 | WARNING  | pilot.util.common                | should_abort              | data:queue_monitoring:received graceful stop - abort after this iteration
[2021-07-11 18:15:01] 2021-07-11 22:14:30,732 | DEBUG    | pilot.control.data               | queue_monitoring          | will not set job_aborted yet
[2021-07-11 18:15:01] 2021-07-11 22:14:30,733 | DEBUG    | pilot.control.data               | queue_monitoring          | [data] queue_monitor thread has finished
[2021-07-11 18:15:01] 2021-07-11 22:14:59,668 | WARNING  | pilot.control.job                | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 72 s)
[2021-07-11 18:15:01] 2021-07-11 22:14:59,669 | DEBUG    | pilot.util.processes             | threads_aborted           | aborting since the last relevant thread is about to finish
[2021-07-11 18:15:01] 2021-07-11 22:14:59,669 | DEBUG    | pilot.control.job                | job_monitor               | will proceed to set job_aborted
[2021-07-11 18:15:01] 2021-07-11 22:14:59,669 | DEBUG    | pilot.control.job                | job_monitor               | [job] job monitor thread has finished
[2021-07-11 18:15:01] 2021-07-11 22:15:00,004 | INFO     | pilot.workflow.generic           | run                       | end of generic workflow (traces error code: 0)
[2021-07-11 18:15:01] 2021-07-11 22:15:00,005 | INFO     | root                             | wrap_up                   | traces error code: 0
[2021-07-11 18:15:01] 2021-07-11 22:15:00,005 | INFO     | root                             | wrap_up                   | pilot has finished
[2021-07-11 18:15:01] 2021-07-11 22:15:00,159 [wrapper] ==== pilot stdout END ====
[2021-07-11 18:15:01] 2021-07-11 22:15:00,186 [wrapper] ==== wrapper stdout RESUME ====
[2021-07-11 18:15:01] 2021-07-11 22:15:00,211 [wrapper] Pilot exit status: 0
[2021-07-11 18:15:01] 2021-07-11 22:15:00,381 [wrapper] pandaids: 5117592129
[2021-07-11 18:15:01] 2021-07-11 22:15:00,429 [wrapper] apfmon messages muted
[2021-07-11 18:15:01] 2021-07-11 22:15:00,453 [wrapper] Test setup, not cleaning
[2021-07-11 18:15:01] 2021-07-11 22:15:00,477 [wrapper] ==== wrapper stdout END ====
[2021-07-11 18:15:01] 2021-07-11 22:15:00,501 [wrapper] ==== wrapper stderr END ====
[2021-07-11 18:15:01] 2021-07-11 22:15:00,549 [wrapper] wrapperexiting ec=0, duration=1983
[2021-07-11 18:15:01] 2021-07-11 22:15:00,574 [wrapper] apfmon messages muted
[2021-07-11 18:15:01]  *** Error codes and diagnostics ***
[2021-07-11 18:15:01]     "exeErrorCode": 0,
[2021-07-11 18:15:01]     "exeErrorDiag": "",
[2021-07-11 18:15:01]     "pilotErrorCode": 0,
[2021-07-11 18:15:01]     "pilotErrorDiag": "",
[2021-07-11 18:15:01]  *** Listing of results directory ***
[2021-07-11 18:15:01] total 45132
[2021-07-11 18:15:01] -rw-r--r-- 1 boinc boinc   334707 Jul 11 16:25 pilot2.tar.gz
[2021-07-11 18:15:01] -rwx------ 1 boinc boinc    20591 Jul 11 17:18 runpilot2-wrapper.sh
[2021-07-11 18:15:01] -rw-r--r-- 1 boinc boinc     3214 Jul 11 17:21 queuedata.json
[2021-07-11 18:15:01] -rw-r--r-- 1 boinc boinc      107 Jul 11 17:41 wrapper_26015_x86_64-pc-linux-gnu
[2021-07-11 18:15:01] -rwxr-xr-x 1 boinc boinc     6966 Jul 11 17:41 run_atlas
[2021-07-11 18:15:01] -rw-r--r-- 1 boinc boinc      112 Jul 11 17:41 job.xml
[2021-07-11 18:15:01] drwxrwx--x 2 boinc boinc     4096 Jul 11 17:41 shared
[2021-07-11 18:15:01] -rw-r--r-- 1 boinc boinc     6188 Jul 11 17:41 init_data.xml
[2021-07-11 18:15:01] -rw-r--r-- 1 boinc boinc        0 Jul 11 17:41 boinc_lockfile
[2021-07-11 18:15:01] -rw-r--r-- 1 boinc boinc    16547 Jul 11 17:41 start_atlas.sh
[2021-07-11 18:15:01] -rw-r--r-- 1 boinc boinc   344157 Jul 11 17:41 input.tar.gz
[2021-07-11 18:15:01] -rw-r--r-- 1 boinc boinc 37965264 Jul 11 17:41 EVNT.04972714._000027.pool.root.1
[2021-07-11 18:15:01] -rw-r--r-- 1 boinc boinc     2608 Jul 11 17:41 pandaJob.out
[2021-07-11 18:15:01] -rw------- 1 boinc boinc  1068211 Jul 11 17:43 agis_schedconf.cvmfs.json
[2021-07-11 18:15:01] -rw------- 1 boinc boinc  1962599 Jul 11 17:43 cric_ddmendpoints.json
[2021-07-11 18:15:01] drwx------ 4 boinc boinc     4096 Jul 11 17:43 pilot2
[2021-07-11 18:15:01] -rw------- 1 boinc boinc  1750557 Jul 11 18:13 output.1.9dc4c0c3-be08-4489-8b69-27ff4cb8d036_5000.pool.root
[2021-07-11 18:15:01] -rw-r--r-- 1 boinc boinc      534 Jul 11 18:14 boinc_task_state.xml
[2021-07-11 18:15:01] -rw------- 1 boinc boinc     1010 Jul 11 18:14 memory_monitor_summary.json
[2021-07-11 18:15:01] -rw------- 1 boinc boinc   193364 Jul 11 18:14 9dc4c0c3-be08-4489-8b69-27ff4cb8d036_5000.1.job.log.tgz
[2021-07-11 18:15:01] -rw------- 1 boinc boinc     7484 Jul 11 18:14 heartbeat.json
[2021-07-11 18:15:01] -rw-r--r-- 1 boinc boinc     8192 Jul 11 18:14 boinc_mmap_file
[2021-07-11 18:15:01] -rw-r--r-- 1 boinc boinc       25 Jul 11 18:14 wrapper_checkpoint.txt
[2021-07-11 18:15:01] -rw------- 1 boinc boinc     7518 Jul 11 18:15 pilotlog.txt
[2021-07-11 18:15:01] -rw------- 1 boinc boinc   216646 Jul 11 18:15 9dc4c0c3-be08-4489-8b69-27ff4cb8d036_5000.1.job.log
[2021-07-11 18:15:01] -rw------- 1 boinc boinc      532 Jul 11 18:15 output.list
[2021-07-11 18:15:01] -rw-r--r-- 1 boinc boinc      744 Jul 11 18:15 runtime_log
[2021-07-11 18:15:01] -rw-r--r-- 1 boinc boinc     9395 Jul 11 18:15 runtime_log.err
[2021-07-11 18:15:01] -rw------- 1 boinc boinc  2181120 Jul 11 18:15 result.tar.gz
[2021-07-11 18:15:01] -rw------- 1 boinc boinc      562 Jul 11 18:15 32SMDma1vMzn7Olcko1bjSoqABFKDmABFKDmumdXDmRsFKDmCCiQ9m.diag
[2021-07-11 18:15:01] -rw-r--r-- 1 boinc boinc    29618 Jul 11 18:15 stderr.txt
[2021-07-11 18:15:01] HITS file was successfully produced:
[2021-07-11 18:15:01] -rw------- 1 boinc boinc 1750557 Jul 11 18:13 shared/HITS.pool.root.1
[2021-07-11 18:15:01]  *** Contents of shared directory: ***
[2021-07-11 18:15:01] total 41280
[2021-07-11 18:15:01] -rw-r--r-- 1 boinc boinc    16547 Jul 11 17:41 start_atlas.sh
[2021-07-11 18:15:01] -rw-r--r-- 1 boinc boinc   344157 Jul 11 17:41 input.tar.gz
[2021-07-11 18:15:01] -rw-r--r-- 1 boinc boinc 37965264 Jul 11 17:41 ATLAS.root_0
[2021-07-11 18:15:01] -rw------- 1 boinc boinc  1750557 Jul 11 18:13 HITS.pool.root.1
[2021-07-11 18:15:01] -rw------- 1 boinc boinc  2181120 Jul 11 18:15 result.tar.gz
18:15:03 (17044): run_atlas exited; CPU time 311.179017
18:15:03 (17044): called boinc_finish(0)

</stderr_txt>
]]>


©2024 CERN