Name | 9zWMDmFSxMzn7Olcko1bjSoqABFKDmABFKDmumdXDmbsFKDmS1YRjm_0 |
Workunit | 2102906 |
Created | 11 Jul 2021, 22:52:23 UTC |
Sent | 11 Jul 2021, 23:05:34 UTC |
Report deadline | 18 Jul 2021, 23:05:34 UTC |
Received | 11 Jul 2021, 23:58:59 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 4357 |
Run time | 48 min 59 sec |
CPU time | 17 min 31 sec |
Validate state | Valid |
Credit | 12.48 |
Device peak FLOPS | 3.04 GFLOPS |
Application version | ATLAS Simulation v1.04 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.66 GB |
Peak swap size | 34.31 GB |
Peak disk usage | 80.15 MB |
<core_client_version>7.9.3</core_client_version> <![CDATA[ <stderr_txt> 19:09:48 (57745): wrapper (7.7.26015): starting 19:09:48 (57745): wrapper: running run_atlas (--nthreads 1) [2021-07-11 19:09:48] Arguments: --nthreads 1 [2021-07-11 19:09:48] Threads: 1 [2021-07-11 19:09:48] Checking for CVMFS [2021-07-11 19:09:54] Probing /cvmfs/atlas.cern.ch... OK [2021-07-11 19:09:55] Probing /cvmfs/atlas-condb.cern.ch... OK [2021-07-11 19:09:55] Running cvmfs_config stat atlas.cern.ch [2021-07-11 19:09:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2021-07-11 19:09:56] 2.9.0.0 58445 0 24660 88195 3 1 3654037 4194305 0 130560 0 0 0.000 529 203 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 0 [2021-07-11 19:09:56] CVMFS is ok [2021-07-11 19:09:56] Efficiency of ATLAS tasks can be improved by the following measure(s): [2021-07-11 19:09:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io. [2021-07-11 19:09:56] Small home clusters do not require a local http proxy but it is suggested if [2021-07-11 19:09:56] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks. [2021-07-11 19:09:56] Further information can be found at the LHC@home message board. [2021-07-11 19:09:56] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2021-07-11 19:09:56] Checking for singularity binary... [2021-07-11 19:09:56] Using singularity found in PATH at /usr/local/bin/singularity [2021-07-11 19:09:56] Running /usr/local/bin/singularity --version [2021-07-11 19:09:56] singularity version 3.7.2+10-ga969f0f8c [2021-07-11 19:09:56] Checking singularity works with /usr/local/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2021-07-11 19:09:58] E5-2670 [2021-07-11 19:09:58] Singularity works [2021-07-11 19:09:58] Starting ATLAS job with PandaID=5117614881 [2021-07-11 19:09:58] Running command: /usr/local/bin/singularity exec --pwd /var/lib/boinc-client/slots/39 -B /cvmfs,/var /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2021-07-11 19:58:44] *** The last 200 lines of the pilot log: *** [2021-07-11 19:58:44] } [2021-07-11 19:58:44] 2021-07-11 23:57:43,451 | DEBUG | pilot.user.atlas.utilities | get_metadata_dict_from_txt | writing prmon dictionary to: /var/lib/boinc-client/slots/39/PanDA_Pilot-5117614881/memory_monitor_o [2021-07-11 19:58:44] 2021-07-11 23:57:43,453 | INFO | pilot.util.container | execute | executing command: curl --connect-timeout 20 --max-time 120 -H "Content-Type: application/json" -X P [2021-07-11 19:58:44] 2021-07-11 23:57:44,774 | DEBUG | pilot.user.atlas.common | update_server | sent prmon JSON dictionary to logstash server [2021-07-11 19:58:44] 2021-07-11 23:57:44,774 | DEBUG | pilot.user.atlas.common | update_server | stdout: ok [2021-07-11 19:58:44] 2021-07-11 23:57:44,775 | DEBUG | pilot.user.atlas.common | update_server | stderr: % Total % Received % Xferd Average Speed Time Time Time Current [2021-07-11 19:58:44] Dload Upload Total Spent Left Speed [2021-07-11 19:58:44] [2021-07-11 19:58:44] 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 [2021-07-11 19:58:44] 0 0 0 0 0 0 0 0 --:--:-- 0:00:01 --:--:-- 0 [2021-07-11 19:58:44] 100 12698 100 2 100 12696 1 10379 0:00:02 0:00:01 0:00:01 10389 [2021-07-11 19:58:44] [2021-07-11 19:58:44] 2021-07-11 23:57:44,775 | INFO | pilot.control.job | send_state | pilot will not update the server (heartbeat message will be written to file) [2021-07-11 19:58:44] 2021-07-11 23:57:44,775 | INFO | pilot.control.job | send_state | job 5117614881 has finished - writing final server update [2021-07-11 19:58:44] 2021-07-11 23:57:44,776 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics_string | job definition core count: 1 [2021-07-11 19:58:44] 2021-07-11 23:57:44,776 | INFO | pilot.user.atlas.jobmetrics | get_job_metrics_string | will not add max space = -36525375 B to job metrics [2021-07-11 19:58:44] 2021-07-11 23:57:44,777 | DEBUG | pilot.api.analytics | get_fitted_data | removing tails from data to be fitted [2021-07-11 19:58:44] 2021-07-11 23:57:44,777 | INFO | pilot.api.analytics | get_fitted_data | fitting pss+swap vs Time [2021-07-11 19:58:44] 2021-07-11 23:57:44,778 | INFO | pilot.api.analytics | get_fitted_data | current memory leak: 574.30 B/s (using 37 data points, chi2=840015) [2021-07-11 19:58:44] 2021-07-11 23:57:44,778 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics | job metrics="actualCoreCount=7 nEvents=2 dbTime=257.32 dbData=4211388 leak=574.30 chi2=840015 eventn [2021-07-11 19:58:44] 2021-07-11 23:57:44,778 | INFO | pilot.control.job | get_data_structure | mean actualcorecount: 7.189189 [2021-07-11 19:58:44] 2021-07-11 23:57:44,778 | INFO | pilot.control.job | get_data_structure | total number of processed events: 2 (read) [2021-07-11 19:58:44] 2021-07-11 23:57:44,797 | INFO | pilot.util.container | execute | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2021-07-11 19:58:44] 2021-07-11 23:57:44,895 | INFO | pilot.user.atlas.utilities | get_memory_values | using path: /var/lib/boinc-client/slots/39/PanDA_Pilot-5117614881/memory_monitor_summary.json (trf n [2021-07-11 19:58:44] 2021-07-11 23:57:44,896 | DEBUG | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'Avg': {'nprocs': 4.977, 'nthreads': 5.886, 'pss': 1151802.0, 'rchar': 160110.0, [2021-07-11 19:58:44] 2021-07-11 23:57:44,897 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard info from prmon json [2021-07-11 19:58:44] 2021-07-11 23:57:44,897 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard memory fields from prmon json [2021-07-11 19:58:44] 2021-07-11 23:57:44,897 | INFO | pilot.util.timing | timing_report | .............................. [2021-07-11 19:58:44] 2021-07-11 23:57:44,897 | INFO | pilot.util.timing | timing_report | . Timing measurements: [2021-07-11 19:58:44] 2021-07-11 23:57:44,897 | INFO | pilot.util.timing | timing_report | . get job = 0 s [2021-07-11 19:58:44] 2021-07-11 23:57:44,897 | INFO | pilot.util.timing | timing_report | . initial setup = 2 s [2021-07-11 19:58:44] 2021-07-11 23:57:44,897 | INFO | pilot.util.timing | timing_report | . payload setup = 57 s [2021-07-11 19:58:44] 2021-07-11 23:57:44,898 | INFO | pilot.util.timing | timing_report | . total setup = 59 s [2021-07-11 19:58:44] 2021-07-11 23:57:44,898 | INFO | pilot.util.timing | timing_report | . stage-in = 0 s [2021-07-11 19:58:44] 2021-07-11 23:57:44,898 | INFO | pilot.util.timing | timing_report | . payload execution = 2715 s [2021-07-11 19:58:44] 2021-07-11 23:57:44,898 | INFO | pilot.util.timing | timing_report | . stage-out = 1 s [2021-07-11 19:58:44] 2021-07-11 23:57:44,898 | INFO | pilot.util.timing | timing_report | .............................. [2021-07-11 19:58:44] 2021-07-11 23:57:44,898 | DEBUG | pilot.control.job | send_state | is_harvester_mode(args) : False [2021-07-11 19:58:44] 2021-07-11 23:57:44,899 | DEBUG | pilot.control.job | write_heartbeat_to_file | heartbeat dictionary: {'jobId': '5117614881', 'state': 'finished', 'timestamp': '2021-07-11T19:57:44 [2021-07-11 19:58:44] 2021-07-11 23:57:44,899 | DEBUG | pilot.control.job | write_heartbeat_to_file | wrote heartbeat to file /var/lib/boinc-client/slots/39/heartbeat.json [2021-07-11 19:58:44] 2021-07-11 23:57:44,900 | DEBUG | pilot.control.job | queue_monitor | job 5117614881 was dequeued from the monitored payloads queue [2021-07-11 19:58:44] 2021-07-11 23:57:45,060 | DEBUG | pilot.control.job | queue_monitor | tmp job object deleted [2021-07-11 19:58:44] 2021-07-11 23:57:45,132 | INFO | pilot.control.job | make_job_report | [2021-07-11 19:58:44] 2021-07-11 23:57:45,132 | INFO | pilot.control.job | make_job_report | job summary report [2021-07-11 19:58:44] 2021-07-11 23:57:45,133 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2021-07-11 19:58:44] 2021-07-11 23:57:45,133 | INFO | pilot.control.job | make_job_report | PanDA job id: 5117614881 [2021-07-11 19:58:44] 2021-07-11 23:57:45,133 | INFO | pilot.control.job | make_job_report | task id: NULL [2021-07-11 19:58:44] 2021-07-11 23:57:45,133 | INFO | pilot.control.job | make_job_report | errors: (none) [2021-07-11 19:58:44] 2021-07-11 23:57:45,133 | INFO | pilot.control.job | make_job_report | status: LOG_TRANSFER = DONE [2021-07-11 19:58:44] 2021-07-11 23:57:45,133 | INFO | pilot.control.job | make_job_report | pilot state: finished [2021-07-11 19:58:44] 2021-07-11 23:57:45,133 | INFO | pilot.control.job | make_job_report | transexitcode: 0 [2021-07-11 19:58:44] 2021-07-11 23:57:45,134 | INFO | pilot.control.job | make_job_report | exeerrorcode: 0 [2021-07-11 19:58:44] 2021-07-11 23:57:45,134 | INFO | pilot.control.job | make_job_report | exeerrordiag: [2021-07-11 19:58:44] 2021-07-11 23:57:45,134 | INFO | pilot.control.job | make_job_report | exitcode: 0 [2021-07-11 19:58:44] 2021-07-11 23:57:45,134 | INFO | pilot.control.job | make_job_report | exitmsg: OK [2021-07-11 19:58:44] 2021-07-11 23:57:45,134 | INFO | pilot.control.job | make_job_report | cpuconsumptiontime: 1091 s [2021-07-11 19:58:44] 2021-07-11 23:57:45,134 | INFO | pilot.control.job | make_job_report | nevents: 2 [2021-07-11 19:58:44] 2021-07-11 23:57:45,134 | INFO | pilot.control.job | make_job_report | neventsw: 0 [2021-07-11 19:58:44] 2021-07-11 23:57:45,135 | INFO | pilot.control.job | make_job_report | pid: 79622 [2021-07-11 19:58:44] 2021-07-11 23:57:45,135 | INFO | pilot.control.job | make_job_report | pgrp: 79622 [2021-07-11 19:58:44] 2021-07-11 23:57:45,135 | INFO | pilot.control.job | make_job_report | corecount: 1 [2021-07-11 19:58:44] 2021-07-11 23:57:45,135 | INFO | pilot.control.job | make_job_report | event service: False [2021-07-11 19:58:44] 2021-07-11 23:57:45,135 | INFO | pilot.control.job | make_job_report | sizes: {23778175: 3856921, 23778176: 3857090, 23778177: 3857198, 23780953: 3884886, 23780954: 389435 [2021-07-11 19:58:44] 2021-07-11 23:57:45,135 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2021-07-11 19:58:44] 2021-07-11 23:57:45,135 | INFO | pilot.control.job | make_job_report | [2021-07-11 19:58:44] 2021-07-11 23:57:45,136 | DEBUG | pilot.control.job | has_job_completed | ls -lF /var/lib/boinc-client/slots/39: [2021-07-11 19:58:44] [2021-07-11 19:58:44] 2021-07-11 23:57:45,136 | INFO | pilot.util.container | execute | executing command: ls -lF /var/lib/boinc-client/slots/39 [2021-07-11 19:58:44] 2021-07-11 23:57:45,187 | DEBUG | pilot.control.job | has_job_completed | total 42824 [2021-07-11 19:58:44] -rw------- 1 boinc boinc 250360 Jul 11 19:57 0efc786f-701e-4c0d-96f4-73c7dc3c647e_79969.1.job.log [2021-07-11 19:58:44] -rw------- 1 boinc boinc 187725 Jul 11 19:57 0efc786f-701e-4c0d-96f4-73c7dc3c647e_79969.1.job.log.tgz [2021-07-11 19:58:44] -rw------- 1 boinc boinc 130 Jul 11 19:10 9zWMDmFSxMzn7Olcko1bjSoqABFKDmABFKDmumdXDmbsFKDmS1YRjm.diag [2021-07-11 19:58:44] -rw------- 1 boinc boinc 1068195 Jul 11 19:11 agis_schedconf.cvmfs.json [2021-07-11 19:58:44] -rw-r--r-- 1 boinc boinc 0 Jul 11 19:09 boinc_lockfile [2021-07-11 19:58:44] -rw-r--r-- 1 boinc boinc 8192 Jul 11 19:57 boinc_mmap_file [2021-07-11 19:58:44] -rw-r--r-- 1 boinc boinc 534 Jul 11 19:55 boinc_task_state.xml [2021-07-11 19:58:44] -rw------- 1 boinc boinc 1962599 Jul 11 19:11 cric_ddmendpoints.json [2021-07-11 19:58:44] -rw-r--r-- 1 boinc boinc 37708683 Jul 11 19:09 EVNT.04972714._000031.pool.root.1 [2021-07-11 19:58:44] -rw------- 1 boinc boinc 9205 Jul 11 19:57 heartbeat.json [2021-07-11 19:58:44] -rw-r--r-- 1 boinc boinc 6188 Jul 11 19:09 init_data.xml [2021-07-11 19:58:44] -rw-r--r-- 1 boinc boinc 344113 Jul 11 19:09 input.tar.gz [2021-07-11 19:58:44] -rw-r--r-- 1 boinc boinc 112 Jul 11 19:09 job.xml [2021-07-11 19:58:44] -rw------- 1 boinc boinc 1013 Jul 11 19:57 memory_monitor_summary.json [2021-07-11 19:58:44] -rw------- 1 boinc boinc 1592297 Jul 11 19:55 output.1.0efc786f-701e-4c0d-96f4-73c7dc3c647e_79969.pool.root [2021-07-11 19:58:44] -rw------- 1 boinc boinc 536 Jul 11 19:57 output.list [2021-07-11 19:58:44] -rw-r--r-- 1 boinc boinc 2579 Jul 11 19:09 pandaJob.out [2021-07-11 19:58:44] drwxrwx--- 2 boinc boinc 4096 Jul 11 19:57 PanDA_Pilot-5117614881/ [2021-07-11 19:58:44] drwx------ 4 boinc boinc 4096 Jul 11 19:11 pilot2/ [2021-07-11 19:58:44] -rw-r--r-- 1 boinc boinc 334707 Jul 11 18:30 pilot2.tar.gz [2021-07-11 19:58:44] -rw------- 1 boinc boinc 231390 Jul 11 19:57 pilotlog.txt [2021-07-11 19:58:44] -rw-r--r-- 1 boinc boinc 3214 Jul 11 18:52 queuedata.json [2021-07-11 19:58:44] -rwxr-xr-x 1 boinc boinc 6966 Jul 11 19:09 run_atlas* [2021-07-11 19:58:44] -rwx------ 1 boinc boinc 20591 Jul 11 18:50 runpilot2-wrapper.sh* [2021-07-11 19:58:44] -rw-r--r-- 1 boinc boinc 407 Jul 11 19:10 runtime_log [2021-07-11 19:58:44] -rw-r--r-- 1 boinc boinc 5574 Jul 11 19:10 runtime_log.err [2021-07-11 19:58:44] drwxrwx--x 2 boinc boinc 4096 Jul 11 19:09 shared/ [2021-07-11 19:58:44] -rw-r--r-- 1 boinc boinc 16551 Jul 11 19:09 start_atlas.sh [2021-07-11 19:58:44] -rw-r--r-- 1 boinc boinc 2195 Jul 11 19:09 stderr.txt [2021-07-11 19:58:44] -rw-r--r-- 1 boinc boinc 107 Jul 11 19:09 wrapper_26015_x86_64-pc-linux-gnu [2021-07-11 19:58:44] -rw-r--r-- 1 boinc boinc 25 Jul 11 19:57 wrapper_checkpoint.txt [2021-07-11 19:58:44] 2021-07-11 23:57:45,187 | INFO | pilot.util.queuehandling | queue_report | queue jobs has 0 job(s) [2021-07-11 19:58:44] 2021-07-11 23:57:45,187 | INFO | pilot.util.queuehandling | queue_report | queue payloads has 0 job(s) [2021-07-11 19:58:44] 2021-07-11 23:57:45,188 | INFO | pilot.util.queuehandling | queue_report | queue data_in has 0 job(s) [2021-07-11 19:58:44] 2021-07-11 23:57:45,188 | INFO | pilot.util.queuehandling | queue_report | queue data_out has 0 job(s) [2021-07-11 19:58:44] 2021-07-11 23:57:45,188 | INFO | pilot.util.queuehandling | queue_report | queue current_data_in has 0 job(s) [2021-07-11 19:58:44] 2021-07-11 23:57:45,188 | INFO | pilot.util.queuehandling | queue_report | queue validated_jobs has 0 job(s) [2021-07-11 19:58:44] 2021-07-11 23:57:45,188 | INFO | pilot.util.queuehandling | queue_report | queue validated_payloads has 0 job(s) [2021-07-11 19:58:44] 2021-07-11 23:57:45,188 | INFO | pilot.util.queuehandling | queue_report | queue monitored_payloads has 0 job(s) [2021-07-11 19:58:44] 2021-07-11 23:57:45,188 | INFO | pilot.util.queuehandling | queue_report | queue finished_jobs has 0 job(s) [2021-07-11 19:58:44] 2021-07-11 23:57:45,188 | INFO | pilot.util.queuehandling | queue_report | queue finished_payloads has 0 job(s) [2021-07-11 19:58:44] 2021-07-11 23:57:45,188 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_in has 1 job(s) [2021-07-11 19:58:44] 2021-07-11 23:57:45,188 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_out has 0 job(s) [2021-07-11 19:58:44] 2021-07-11 23:57:45,188 | INFO | pilot.util.queuehandling | queue_report | queue failed_jobs has 0 job(s) [2021-07-11 19:58:44] 2021-07-11 23:57:45,188 | INFO | pilot.util.queuehandling | queue_report | queue failed_payloads has 0 job(s) [2021-07-11 19:58:44] 2021-07-11 23:57:45,189 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_in has 0 job(s) [2021-07-11 19:58:44] 2021-07-11 23:57:45,189 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_out has 0 job(s) [2021-07-11 19:58:44] 2021-07-11 23:57:45,189 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobs has 0 job(s) [2021-07-11 19:58:44] 2021-07-11 23:57:45,189 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s) [2021-07-11 19:58:44] 2021-07-11 23:57:45,189 | INFO | pilot.control.job | has_job_completed | job 5117614881 has completed (purged errors) [2021-07-11 19:58:44] 2021-07-11 23:57:45,189 | INFO | pilot.util.processes | cleanup | overall cleanup function is called [2021-07-11 19:58:44] 2021-07-11 23:57:45,191 | DEBUG | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc-client/slots/39/PanDA_Pilot-5117614881 [2021-07-11 19:58:44] 2021-07-11 23:57:46,196 | INFO | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [79622] [2021-07-11 19:58:44] 2021-07-11 23:57:46,196 | INFO | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 79622 [2021-07-11 19:58:44] 2021-07-11 23:57:46,197 | INFO | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes [2021-07-11 19:58:44] 2021-07-11 23:57:47,200 | INFO | pilot.util.processes | cleanup | collected zombie processes [2021-07-11 19:58:44] 2021-07-11 23:57:47,200 | INFO | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=79622 [2021-07-11 19:58:44] 2021-07-11 23:57:47,370 | INFO | pilot.util.processes | kill_processes | process IDs to be killed: [79622] (in reverse order) [2021-07-11 19:58:44] 2021-07-11 23:57:47,485 | WARNING | pilot.util.processes | kill_processes | found no corresponding commands to process id(s) [2021-07-11 19:58:44] 2021-07-11 23:57:47,485 | INFO | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs [2021-07-11 19:58:44] 2021-07-11 23:57:47,486 | DEBUG | pilot.util.queuehandling | purge_queue | queue purged [2021-07-11 19:58:44] 2021-07-11 23:57:47,486 | INFO | pilot.control.job | retrieve | ready for new job [2021-07-11 19:58:44] 2021-07-11 23:57:47,486 | INFO | root | retrieve | pilot has finished for previous job - re-establishing logging [2021-07-11 19:58:44] 2021-07-11 23:57:47,487 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2021-07-11 19:58:44] 2021-07-11 23:57:47,487 | INFO | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 2.12.2 (1) *** [2021-07-11 19:58:44] 2021-07-11 23:57:47,487 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2021-07-11 19:58:44] 2021-07-11 23:57:47,488 | INFO | pilot.util.auxiliary | pilot_version_banner | [2021-07-11 19:58:44] 2021-07-11 23:57:47,506 | INFO | pilot.util.auxiliary | display_architecture_info | architecture information: [2021-07-11 19:58:44] 2021-07-11 23:57:48,043 | INFO | pilot.util.auxiliary | display_architecture_info | [2021-07-11 19:58:44] LSB Version: :core-4.1-amd64:core-4.1-noarch [2021-07-11 19:58:44] Distributor ID: CentOS [2021-07-11 19:58:44] Description: CentOS Linux release 7.8.2003 (Core) [2021-07-11 19:58:44] Release: 7.8.2003 [2021-07-11 19:58:44] Codename: Core [2021-07-11 19:58:44] 2021-07-11 23:57:48,043 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2021-07-11 19:58:44] 2021-07-11 23:57:48,545 | DEBUG | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc-client/slots/39 [2021-07-11 19:58:44] 2021-07-11 23:57:48,596 | INFO | pilot.util.monitoring | check_local_space | sufficient remaining disk space (46956281856 B) [2021-07-11 19:58:44] 2021-07-11 23:57:48,596 | WARNING | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job [2021-07-11 19:58:44] 2021-07-11 23:57:48,596 | DEBUG | pilot.control.job | retrieve | will not set job_aborted yet [2021-07-11 19:58:44] 2021-07-11 23:57:48,597 | WARNING | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration [2021-07-11 19:58:44] 2021-07-11 23:57:48,597 | WARNING | pilot.control.monitor | control | aborting monitor loop since graceful_stop has been set [2021-07-11 19:58:44] 2021-07-11 23:57:48,597 | DEBUG | pilot.control.job | retrieve | [job] retrieve thread has finished [2021-07-11 19:58:44] 2021-07-11 23:57:48,597 | INFO | pilot.control.monitor | control | [monitor] control thread has ended [2021-07-11 19:58:44] 2021-07-11 23:57:48,708 | DEBUG | pilot.control.job | create_data_payload | will not set job_aborted yet [2021-07-11 19:58:44] 2021-07-11 23:57:48,709 | DEBUG | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished [2021-07-11 19:58:44] 2021-07-11 23:57:48,972 | DEBUG | pilot.control.data | control | data control ending since graceful_stop has been set [2021-07-11 19:58:44] 2021-07-11 23:57:48,972 | DEBUG | pilot.control.data | control | will not set job_aborted yet [2021-07-11 19:58:44] 2021-07-11 23:57:48,973 | DEBUG | pilot.control.data | control | [data] control thread has finished [2021-07-11 19:58:44] 2021-07-11 23:57:49,088 | WARNING | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration [2021-07-11 19:58:44] 2021-07-11 23:57:49,091 | DEBUG | pilot.control.payload | validate_post | will not set job_aborted yet [2021-07-11 19:58:44] 2021-07-11 23:57:49,091 | INFO | pilot.control.payload | validate_post | [payload] validate_post thread has finished [2021-07-11 19:58:44] 2021-07-11 23:57:49,217 | DEBUG | pilot.control.payload | failed_post | will not set job_aborted yet [2021-07-11 19:58:44] 2021-07-11 23:57:49,217 | INFO | pilot.control.payload | failed_post | [payload] failed_post thread has finished [2021-07-11 19:58:44] 2021-07-11 23:57:49,467 | DEBUG | pilot.control.payload | validate_pre | will not set job_aborted yet [2021-07-11 19:58:44] 2021-07-11 23:57:49,467 | INFO | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished [2021-07-11 19:58:44] 2021-07-11 23:57:49,572 | DEBUG | pilot.control.job | control | job control ending since graceful_stop has been set [2021-07-11 19:58:44] 2021-07-11 23:57:49,572 | DEBUG | pilot.control.job | control | will not set job_aborted yet [2021-07-11 19:58:44] 2021-07-11 23:57:49,573 | DEBUG | pilot.control.job | control | [job] control thread has finished [2021-07-11 19:58:44] 2021-07-11 23:57:49,593 | DEBUG | pilot.control.data | copytool_in | will not set job_aborted yet [2021-07-11 19:58:44] 2021-07-11 23:57:49,593 | DEBUG | pilot.control.data | copytool_in | [data] copytool_in thread has finished [2021-07-11 19:58:44] 2021-07-11 23:57:49,815 | DEBUG | pilot.control.payload | control | payload control ending since graceful_stop has been set [2021-07-11 19:58:44] 2021-07-11 23:57:49,815 | DEBUG | pilot.control.payload | control | will not set job_aborted yet [2021-07-11 19:58:44] 2021-07-11 23:57:49,815 | DEBUG | pilot.control.payload | control | [payload] control thread has finished [2021-07-11 19:58:44] 2021-07-11 23:57:49,852 | DEBUG | pilot.control.payload | execute_payloads | will not set job_aborted yet [2021-07-11 19:58:44] 2021-07-11 23:57:49,853 | INFO | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished [2021-07-11 19:58:44] 2021-07-11 23:57:49,854 | DEBUG | pilot.control.job | validate | will not set job_aborted yet [2021-07-11 19:58:44] 2021-07-11 23:57:49,854 | DEBUG | pilot.control.job | validate | [job] validate thread has finished [2021-07-11 19:58:44] 2021-07-11 23:57:50,069 | WARNING | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration [2021-07-11 19:58:44] 2021-07-11 23:57:50,069 | DEBUG | pilot.control.job | queue_monitor | will not set job_aborted yet [2021-07-11 19:58:44] 2021-07-11 23:57:50,069 | DEBUG | pilot.control.job | queue_monitor | [job] queue monitor thread has finished [2021-07-11 19:58:44] 2021-07-11 23:57:50,089 | DEBUG | pilot.control.data | copytool_out | will not set job_aborted yet [2021-07-11 19:58:44] 2021-07-11 23:57:50,089 | DEBUG | pilot.control.data | copytool_out | [data] copytool_out thread has finished [2021-07-11 19:58:44] 2021-07-11 23:57:51,598 | DEBUG | pilot.control.data | queue_monitoring | will not set job_aborted yet [2021-07-11 19:58:44] 2021-07-11 23:57:51,598 | DEBUG | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished [2021-07-11 19:58:44] 2021-07-11 23:58:43,084 | WARNING | pilot.control.job | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 62 s) [2021-07-11 19:58:44] 2021-07-11 23:58:43,084 | DEBUG | pilot.util.processes | threads_aborted | aborting since the last relevant thread is about to finish [2021-07-11 19:58:44] 2021-07-11 23:58:43,085 | DEBUG | pilot.control.job | job_monitor | will proceed to set job_aborted [2021-07-11 19:58:44] 2021-07-11 23:58:43,085 | DEBUG | pilot.control.job | job_monitor | [job] job monitor thread has finished [2021-07-11 19:58:44] 2021-07-11 23:58:43,908 | INFO | pilot.workflow.generic | run | end of generic workflow (traces error code: 0) [2021-07-11 19:58:44] 2021-07-11 23:58:43,909 | INFO | root | wrap_up | traces error code: 0 [2021-07-11 19:58:44] 2021-07-11 23:58:43,909 | INFO | root | wrap_up | pilot has finished [2021-07-11 19:58:44] 2021-07-11 23:58:44,040 [wrapper] ==== pilot stdout END ==== [2021-07-11 19:58:44] 2021-07-11 23:58:44,065 [wrapper] ==== wrapper stdout RESUME ==== [2021-07-11 19:58:44] 2021-07-11 23:58:44,089 [wrapper] Pilot exit status: 0 [2021-07-11 19:58:44] 2021-07-11 23:58:44,265 [wrapper] pandaids: 5117614881 [2021-07-11 19:58:44] 2021-07-11 23:58:44,313 [wrapper] apfmon messages muted [2021-07-11 19:58:44] 2021-07-11 23:58:44,337 [wrapper] Test setup, not cleaning [2021-07-11 19:58:44] 2021-07-11 23:58:44,361 [wrapper] ==== wrapper stdout END ==== [2021-07-11 19:58:44] 2021-07-11 23:58:44,385 [wrapper] ==== wrapper stderr END ==== [2021-07-11 19:58:44] 2021-07-11 23:58:44,421 [wrapper] wrapperexiting ec=0, duration=2924 [2021-07-11 19:58:44] 2021-07-11 23:58:44,445 [wrapper] apfmon messages muted [2021-07-11 19:58:44] *** Error codes and diagnostics *** [2021-07-11 19:58:44] "exeErrorCode": 0, [2021-07-11 19:58:44] "exeErrorDiag": "", [2021-07-11 19:58:44] "pilotErrorCode": 0, [2021-07-11 19:58:44] "pilotErrorDiag": "", [2021-07-11 19:58:44] *** Listing of results directory *** [2021-07-11 19:58:45] total 44660 [2021-07-11 19:58:45] -rw-r--r-- 1 boinc boinc 334707 Jul 11 18:30 pilot2.tar.gz [2021-07-11 19:58:45] -rwx------ 1 boinc boinc 20591 Jul 11 18:50 runpilot2-wrapper.sh [2021-07-11 19:58:45] -rw-r--r-- 1 boinc boinc 3214 Jul 11 18:52 queuedata.json [2021-07-11 19:58:45] -rw-r--r-- 1 boinc boinc 107 Jul 11 19:09 wrapper_26015_x86_64-pc-linux-gnu [2021-07-11 19:58:45] -rwxr-xr-x 1 boinc boinc 6966 Jul 11 19:09 run_atlas [2021-07-11 19:58:45] -rw-r--r-- 1 boinc boinc 112 Jul 11 19:09 job.xml [2021-07-11 19:58:45] drwxrwx--x 2 boinc boinc 4096 Jul 11 19:09 shared [2021-07-11 19:58:45] -rw-r--r-- 1 boinc boinc 6188 Jul 11 19:09 init_data.xml [2021-07-11 19:58:45] -rw-r--r-- 1 boinc boinc 0 Jul 11 19:09 boinc_lockfile [2021-07-11 19:58:45] -rw-r--r-- 1 boinc boinc 16551 Jul 11 19:09 start_atlas.sh [2021-07-11 19:58:45] -rw-r--r-- 1 boinc boinc 344113 Jul 11 19:09 input.tar.gz [2021-07-11 19:58:45] -rw-r--r-- 1 boinc boinc 37708683 Jul 11 19:09 EVNT.04972714._000031.pool.root.1 [2021-07-11 19:58:45] -rw-r--r-- 1 boinc boinc 2579 Jul 11 19:09 pandaJob.out [2021-07-11 19:58:45] -rw------- 1 boinc boinc 1068195 Jul 11 19:11 agis_schedconf.cvmfs.json [2021-07-11 19:58:45] -rw------- 1 boinc boinc 1962599 Jul 11 19:11 cric_ddmendpoints.json [2021-07-11 19:58:45] drwx------ 4 boinc boinc 4096 Jul 11 19:11 pilot2 [2021-07-11 19:58:45] -rw-r--r-- 1 boinc boinc 534 Jul 11 19:55 boinc_task_state.xml [2021-07-11 19:58:45] -rw------- 1 boinc boinc 1592297 Jul 11 19:55 output.1.0efc786f-701e-4c0d-96f4-73c7dc3c647e_79969.pool.root [2021-07-11 19:58:45] -rw------- 1 boinc boinc 1013 Jul 11 19:57 memory_monitor_summary.json [2021-07-11 19:58:45] -rw------- 1 boinc boinc 187725 Jul 11 19:57 0efc786f-701e-4c0d-96f4-73c7dc3c647e_79969.1.job.log.tgz [2021-07-11 19:58:45] -rw------- 1 boinc boinc 9205 Jul 11 19:57 heartbeat.json [2021-07-11 19:58:45] -rw-r--r-- 1 boinc boinc 8192 Jul 11 19:58 boinc_mmap_file [2021-07-11 19:58:45] -rw-r--r-- 1 boinc boinc 25 Jul 11 19:58 wrapper_checkpoint.txt [2021-07-11 19:58:45] -rw------- 1 boinc boinc 7518 Jul 11 19:58 pilotlog.txt [2021-07-11 19:58:45] -rw------- 1 boinc boinc 265186 Jul 11 19:58 0efc786f-701e-4c0d-96f4-73c7dc3c647e_79969.1.job.log [2021-07-11 19:58:45] -rw------- 1 boinc boinc 536 Jul 11 19:58 output.list [2021-07-11 19:58:45] -rw-r--r-- 1 boinc boinc 748 Jul 11 19:58 runtime_log [2021-07-11 19:58:45] -rw-r--r-- 1 boinc boinc 9429 Jul 11 19:58 runtime_log.err [2021-07-11 19:58:45] -rw------- 1 boinc boinc 2068480 Jul 11 19:58 result.tar.gz [2021-07-11 19:58:45] -rw------- 1 boinc boinc 563 Jul 11 19:58 9zWMDmFSxMzn7Olcko1bjSoqABFKDmABFKDmumdXDmbsFKDmS1YRjm.diag [2021-07-11 19:58:45] -rw-r--r-- 1 boinc boinc 30462 Jul 11 19:58 stderr.txt [2021-07-11 19:58:45] HITS file was successfully produced: [2021-07-11 19:58:45] -rw------- 1 boinc boinc 1592297 Jul 11 19:55 shared/HITS.pool.root.1 [2021-07-11 19:58:45] *** Contents of shared directory: *** [2021-07-11 19:58:45] total 40764 [2021-07-11 19:58:45] -rw-r--r-- 1 boinc boinc 16551 Jul 11 19:09 start_atlas.sh [2021-07-11 19:58:45] -rw-r--r-- 1 boinc boinc 344113 Jul 11 19:09 input.tar.gz [2021-07-11 19:58:45] -rw-r--r-- 1 boinc boinc 37708683 Jul 11 19:09 ATLAS.root_0 [2021-07-11 19:58:45] -rw------- 1 boinc boinc 1592297 Jul 11 19:55 HITS.pool.root.1 [2021-07-11 19:58:45] -rw------- 1 boinc boinc 2068480 Jul 11 19:58 result.tar.gz 19:58:46 (57745): run_atlas exited; CPU time 1051.900985 19:58:46 (57745): called boinc_finish(0) </stderr_txt> ]]>
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