Name | hPFNDm9y9Mzn7Olcko1bjSoqABFKDmABFKDmumdXDm1tFKDmK0pDSo_0 |
Workunit | 2103086 |
Created | 12 Jul 2021, 12:13:07 UTC |
Sent | 12 Jul 2021, 12:14:04 UTC |
Report deadline | 19 Jul 2021, 12:14:04 UTC |
Received | 12 Jul 2021, 13:08:05 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 4357 |
Run time | 34 min 41 sec |
CPU time | 17 min 37 sec |
Validate state | Valid |
Credit | 8.78 |
Device peak FLOPS | 3.04 GFLOPS |
Application version | ATLAS Simulation v1.04 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.70 GB |
Peak swap size | 2.37 GB |
Peak disk usage | 81.23 MB |
<core_client_version>7.9.3</core_client_version> <![CDATA[ <stderr_txt> 08:33:09 (37553): wrapper (7.7.26015): starting 08:33:09 (37553): wrapper: running run_atlas (--nthreads 1) [2021-07-12 08:33:09] Arguments: --nthreads 1 [2021-07-12 08:33:09] Threads: 1 [2021-07-12 08:33:09] Checking for CVMFS [2021-07-12 08:33:10] Probing /cvmfs/atlas.cern.ch... OK [2021-07-12 08:33:10] Probing /cvmfs/atlas-condb.cern.ch... OK [2021-07-12 08:33:10] Running cvmfs_config stat atlas.cern.ch [2021-07-12 08:33:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2021-07-12 08:33:10] 2.9.0.0 5200 191 60384 88228 1 12 3825042 4194305 0 130560 0 408866 99.991 3762 936 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 0 [2021-07-12 08:33:10] CVMFS is ok [2021-07-12 08:33:10] Efficiency of ATLAS tasks can be improved by the following measure(s): [2021-07-12 08:33:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io. [2021-07-12 08:33:10] Small home clusters do not require a local http proxy but it is suggested if [2021-07-12 08:33:10] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks. [2021-07-12 08:33:10] Further information can be found at the LHC@home message board. [2021-07-12 08:33:10] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2021-07-12 08:33:10] Checking for singularity binary... [2021-07-12 08:33:10] Using singularity found in PATH at /usr/local/bin/singularity [2021-07-12 08:33:10] Running /usr/local/bin/singularity --version [2021-07-12 08:33:10] singularity version 3.7.2+10-ga969f0f8c [2021-07-12 08:33:10] Checking singularity works with /usr/local/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2021-07-12 08:33:11] E5-2670 [2021-07-12 08:33:11] Singularity works [2021-07-12 08:33:11] Starting ATLAS job with PandaID=5118067527 [2021-07-12 08:33:11] Running command: /usr/local/bin/singularity exec --pwd /var/lib/boinc-client/slots/29 -B /cvmfs,/var /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2021-07-12 09:07:47] *** The last 200 lines of the pilot log: *** [2021-07-12 09:07:47] "model": "45", [2021-07-12 09:07:47] "model_name": "Intel(R) Xeon(R) CPU E5-2670 0 @ 2.60GHz", [2021-07-12 09:07:47] "node": "E5-2670", [2021-07-12 09:07:47] "platform": "Linux-4.15.0-142-generic-x86_64-with-centos-7.8.2003-Core" [2021-07-12 09:07:47] }, [2021-07-12 09:07:47] "transform": { [2021-07-12 09:07:47] "cpuTime": 6, [2021-07-12 09:07:47] "externalCpuTime": 31, [2021-07-12 09:07:47] "wallTime": 1865 [2021-07-12 09:07:47] } [2021-07-12 09:07:47] } [2021-07-12 09:07:47] } [2021-07-12 09:07:47] 2021-07-12 13:06:46,567 | DEBUG | pilot.user.atlas.common | update_server | no need to update logstash for this job [2021-07-12 09:07:47] 2021-07-12 13:06:46,567 | INFO | pilot.control.job | send_state | pilot will not update the server (heartbeat message will be written to file) [2021-07-12 09:07:47] 2021-07-12 13:06:46,567 | INFO | pilot.control.job | send_state | job 5118067527 has finished - writing final server update [2021-07-12 09:07:47] 2021-07-12 13:06:46,568 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics_string | job definition core count: 1 [2021-07-12 09:07:47] 2021-07-12 13:06:46,568 | INFO | pilot.user.atlas.jobmetrics | get_job_metrics_string | will not add max space = -37002075 B to job metrics [2021-07-12 09:07:47] 2021-07-12 13:06:46,569 | DEBUG | pilot.api.analytics | get_fitted_data | removing tails from data to be fitted [2021-07-12 09:07:47] 2021-07-12 13:06:46,569 | INFO | pilot.api.analytics | get_fitted_data | fitting pss+swap vs Time [2021-07-12 09:07:47] 2021-07-12 13:06:46,570 | INFO | pilot.api.analytics | get_fitted_data | current memory leak: 892.99 B/s (using 25 data points, chi2=504044) [2021-07-12 09:07:47] 2021-07-12 13:06:46,570 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics | job metrics="actualCoreCount=4 nEvents=2 dbTime=230.61 dbData=4211388 leak=892.99 chi2=504044 eventn [2021-07-12 09:07:47] 2021-07-12 13:06:46,570 | INFO | pilot.control.job | get_data_structure | mean actualcorecount: 5.769231 [2021-07-12 09:07:47] 2021-07-12 13:06:46,571 | INFO | pilot.control.job | get_data_structure | total number of processed events: 2 (read) [2021-07-12 09:07:47] 2021-07-12 13:06:46,593 | INFO | pilot.util.container | execute | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2021-07-12 09:07:47] 2021-07-12 13:06:46,709 | INFO | pilot.user.atlas.utilities | get_memory_values | using path: /var/lib/boinc-client/slots/29/PanDA_Pilot-5118067527/memory_monitor_summary.json (trf n [2021-07-12 09:07:47] 2021-07-12 13:06:46,713 | DEBUG | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'Avg': {'nprocs': 4.937, 'nthreads': 5.875, 'pss': 1310029.0, 'rchar': 195096.0, [2021-07-12 09:07:47] 2021-07-12 13:06:46,713 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard info from prmon json [2021-07-12 09:07:47] 2021-07-12 13:06:46,714 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard memory fields from prmon json [2021-07-12 09:07:47] 2021-07-12 13:06:46,714 | INFO | pilot.util.timing | timing_report | .............................. [2021-07-12 09:07:47] 2021-07-12 13:06:46,714 | INFO | pilot.util.timing | timing_report | . Timing measurements: [2021-07-12 09:07:47] 2021-07-12 13:06:46,714 | INFO | pilot.util.timing | timing_report | . get job = 0 s [2021-07-12 09:07:47] 2021-07-12 13:06:46,714 | INFO | pilot.util.timing | timing_report | . initial setup = 1 s [2021-07-12 09:07:47] 2021-07-12 13:06:46,714 | INFO | pilot.util.timing | timing_report | . payload setup = 30 s [2021-07-12 09:07:47] 2021-07-12 13:06:46,714 | INFO | pilot.util.timing | timing_report | . total setup = 31 s [2021-07-12 09:07:47] 2021-07-12 13:06:46,714 | INFO | pilot.util.timing | timing_report | . stage-in = 0 s [2021-07-12 09:07:47] 2021-07-12 13:06:46,715 | INFO | pilot.util.timing | timing_report | . payload execution = 1935 s [2021-07-12 09:07:47] 2021-07-12 13:06:46,715 | INFO | pilot.util.timing | timing_report | . stage-out = 1 s [2021-07-12 09:07:47] 2021-07-12 13:06:46,715 | INFO | pilot.util.timing | timing_report | .............................. [2021-07-12 09:07:47] 2021-07-12 13:06:46,715 | DEBUG | pilot.control.job | send_state | is_harvester_mode(args) : False [2021-07-12 09:07:47] 2021-07-12 13:06:46,716 | DEBUG | pilot.control.job | write_heartbeat_to_file | heartbeat dictionary: {'jobId': '5118067527', 'state': 'finished', 'timestamp': '2021-07-12T09:06:46 [2021-07-12 09:07:47] 2021-07-12 13:06:46,717 | DEBUG | pilot.control.job | write_heartbeat_to_file | wrote heartbeat to file /var/lib/boinc-client/slots/29/heartbeat.json [2021-07-12 09:07:47] 2021-07-12 13:06:46,717 | DEBUG | pilot.control.job | queue_monitor | job 5118067527 was dequeued from the monitored payloads queue [2021-07-12 09:07:47] 2021-07-12 13:06:46,901 | DEBUG | pilot.control.job | queue_monitor | tmp job object deleted [2021-07-12 09:07:47] 2021-07-12 13:06:46,901 | INFO | pilot.control.job | make_job_report | [2021-07-12 09:07:47] 2021-07-12 13:06:46,901 | INFO | pilot.control.job | make_job_report | job summary report [2021-07-12 09:07:47] 2021-07-12 13:06:46,901 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2021-07-12 09:07:47] 2021-07-12 13:06:46,901 | INFO | pilot.control.job | make_job_report | PanDA job id: 5118067527 [2021-07-12 09:07:47] 2021-07-12 13:06:46,902 | INFO | pilot.control.job | make_job_report | task id: NULL [2021-07-12 09:07:47] 2021-07-12 13:06:46,902 | INFO | pilot.control.job | make_job_report | errors: (none) [2021-07-12 09:07:47] 2021-07-12 13:06:46,902 | INFO | pilot.control.job | make_job_report | status: LOG_TRANSFER = DONE [2021-07-12 09:07:47] 2021-07-12 13:06:46,902 | INFO | pilot.control.job | make_job_report | pilot state: finished [2021-07-12 09:07:47] 2021-07-12 13:06:46,902 | INFO | pilot.control.job | make_job_report | transexitcode: 0 [2021-07-12 09:07:47] 2021-07-12 13:06:46,902 | INFO | pilot.control.job | make_job_report | exeerrorcode: 0 [2021-07-12 09:07:47] 2021-07-12 13:06:46,902 | INFO | pilot.control.job | make_job_report | exeerrordiag: [2021-07-12 09:07:47] 2021-07-12 13:06:46,902 | INFO | pilot.control.job | make_job_report | exitcode: 0 [2021-07-12 09:07:47] 2021-07-12 13:06:46,903 | INFO | pilot.control.job | make_job_report | exitmsg: OK [2021-07-12 09:07:47] 2021-07-12 13:06:46,903 | INFO | pilot.control.job | make_job_report | cpuconsumptiontime: 1093 s [2021-07-12 09:07:47] 2021-07-12 13:06:46,903 | INFO | pilot.control.job | make_job_report | nevents: 2 [2021-07-12 09:07:47] 2021-07-12 13:06:46,903 | INFO | pilot.control.job | make_job_report | neventsw: 0 [2021-07-12 09:07:47] 2021-07-12 13:06:46,903 | INFO | pilot.control.job | make_job_report | pid: 48686 [2021-07-12 09:07:47] 2021-07-12 13:06:46,903 | INFO | pilot.control.job | make_job_report | pgrp: 48686 [2021-07-12 09:07:47] 2021-07-12 13:06:46,903 | INFO | pilot.control.job | make_job_report | corecount: 1 [2021-07-12 09:07:47] 2021-07-12 13:06:46,904 | INFO | pilot.control.job | make_job_report | event service: False [2021-07-12 09:07:47] 2021-07-12 13:06:46,904 | INFO | pilot.control.job | make_job_report | sizes: {23826325: 3856842, 23826326: 3857007, 23828296: 3883651, 23828298: 3893121, 23828300: 389339 [2021-07-12 09:07:47] 2021-07-12 13:06:46,904 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2021-07-12 09:07:47] 2021-07-12 13:06:46,904 | INFO | pilot.control.job | make_job_report | [2021-07-12 09:07:47] 2021-07-12 13:06:46,904 | DEBUG | pilot.control.job | has_job_completed | ls -lF /var/lib/boinc-client/slots/29: [2021-07-12 09:07:47] [2021-07-12 09:07:47] 2021-07-12 13:06:46,904 | INFO | pilot.util.container | execute | executing command: ls -lF /var/lib/boinc-client/slots/29 [2021-07-12 09:07:47] 2021-07-12 13:06:47,031 | DEBUG | pilot.control.job | has_job_completed | total 42668 [2021-07-12 09:07:47] -rw------- 1 boinc boinc 208939 Jul 12 09:06 76293aef-4220-4831-b116-95645a639558_96132.1.job.log [2021-07-12 09:07:47] -rw------- 1 boinc boinc 182512 Jul 12 09:06 76293aef-4220-4831-b116-95645a639558_96132.1.job.log.tgz [2021-07-12 09:07:47] -rw------- 1 boinc boinc 1066009 Jul 12 08:33 agis_schedconf.cvmfs.json [2021-07-12 09:07:47] -rw-r--r-- 1 boinc boinc 0 Jul 12 08:33 boinc_lockfile [2021-07-12 09:07:47] -rw-r--r-- 1 boinc boinc 8192 Jul 12 09:06 boinc_mmap_file [2021-07-12 09:07:47] -rw-r--r-- 1 boinc boinc 533 Jul 12 09:05 boinc_task_state.xml [2021-07-12 09:07:47] -rw------- 1 boinc boinc 1962599 Jul 12 08:33 cric_ddmendpoints.json [2021-07-12 09:07:47] -rw-r--r-- 1 boinc boinc 38184411 Jul 12 08:33 EVNT.04972714._000028.pool.root.1 [2021-07-12 09:07:47] -rw------- 1 boinc boinc 8568 Jul 12 09:06 heartbeat.json [2021-07-12 09:07:47] -rw------- 1 boinc boinc 130 Jul 12 08:33 hPFNDm9y9Mzn7Olcko1bjSoqABFKDmABFKDmumdXDm1tFKDmK0pDSo.diag [2021-07-12 09:07:47] -rw-r--r-- 1 boinc boinc 6188 Jul 12 08:33 init_data.xml [2021-07-12 09:07:47] -rw-r--r-- 1 boinc boinc 344102 Jul 12 08:33 input.tar.gz [2021-07-12 09:07:47] -rw-r--r-- 1 boinc boinc 112 Jul 12 08:33 job.xml [2021-07-12 09:07:47] -rw------- 1 boinc boinc 1008 Jul 12 09:06 memory_monitor_summary.json [2021-07-12 09:07:47] -rw------- 1 boinc boinc 1044060 Jul 12 09:05 output.1.76293aef-4220-4831-b116-95645a639558_96132.pool.root [2021-07-12 09:07:47] -rw------- 1 boinc boinc 536 Jul 12 09:06 output.list [2021-07-12 09:07:47] -rw-r--r-- 1 boinc boinc 2572 Jul 12 08:33 pandaJob.out [2021-07-12 09:07:47] drwxrwx--- 2 boinc boinc 4096 Jul 12 09:06 PanDA_Pilot-5118067527/ [2021-07-12 09:07:47] drwx------ 4 boinc boinc 4096 Jul 12 08:33 pilot2/ [2021-07-12 09:07:47] -rw-r--r-- 1 boinc boinc 334707 Jul 12 07:31 pilot2.tar.gz [2021-07-12 09:07:47] -rw------- 1 boinc boinc 189677 Jul 12 09:06 pilotlog.txt [2021-07-12 09:07:47] -rw-r--r-- 1 boinc boinc 3214 Jul 12 08:13 queuedata.json [2021-07-12 09:07:47] -rwxr-xr-x 1 boinc boinc 6966 Jul 12 08:33 run_atlas* [2021-07-12 09:07:47] -rwx------ 1 boinc boinc 20589 Jul 12 08:12 runpilot2-wrapper.sh* [2021-07-12 09:07:47] -rw-r--r-- 1 boinc boinc 407 Jul 12 08:33 runtime_log [2021-07-12 09:07:47] -rw-r--r-- 1 boinc boinc 5586 Jul 12 08:33 runtime_log.err [2021-07-12 09:07:47] drwxrwx--x 2 boinc boinc 4096 Jul 12 08:33 shared/ [2021-07-12 09:07:47] -rw-r--r-- 1 boinc boinc 16583 Jul 12 08:33 start_atlas.sh [2021-07-12 09:07:47] -rw-r--r-- 1 boinc boinc 2204 Jul 12 08:33 stderr.txt [2021-07-12 09:07:47] -rw-r--r-- 1 boinc boinc 107 Jul 12 08:33 wrapper_26015_x86_64-pc-linux-gnu [2021-07-12 09:07:47] -rw-r--r-- 1 boinc boinc 25 Jul 12 09:06 wrapper_checkpoint.txt [2021-07-12 09:07:47] 2021-07-12 13:06:47,032 | INFO | pilot.util.queuehandling | queue_report | queue jobs has 0 job(s) [2021-07-12 09:07:47] 2021-07-12 13:06:47,032 | INFO | pilot.util.queuehandling | queue_report | queue payloads has 0 job(s) [2021-07-12 09:07:47] 2021-07-12 13:06:47,032 | INFO | pilot.util.queuehandling | queue_report | queue data_in has 0 job(s) [2021-07-12 09:07:47] 2021-07-12 13:06:47,032 | INFO | pilot.util.queuehandling | queue_report | queue data_out has 0 job(s) [2021-07-12 09:07:47] 2021-07-12 13:06:47,033 | INFO | pilot.util.queuehandling | queue_report | queue current_data_in has 0 job(s) [2021-07-12 09:07:47] 2021-07-12 13:06:47,033 | INFO | pilot.util.queuehandling | queue_report | queue validated_jobs has 0 job(s) [2021-07-12 09:07:47] 2021-07-12 13:06:47,033 | INFO | pilot.util.queuehandling | queue_report | queue validated_payloads has 0 job(s) [2021-07-12 09:07:47] 2021-07-12 13:06:47,033 | INFO | pilot.util.queuehandling | queue_report | queue monitored_payloads has 0 job(s) [2021-07-12 09:07:47] 2021-07-12 13:06:47,033 | INFO | pilot.util.queuehandling | queue_report | queue finished_jobs has 0 job(s) [2021-07-12 09:07:47] 2021-07-12 13:06:47,033 | INFO | pilot.util.queuehandling | queue_report | queue finished_payloads has 0 job(s) [2021-07-12 09:07:47] 2021-07-12 13:06:47,033 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_in has 1 job(s) [2021-07-12 09:07:47] 2021-07-12 13:06:47,034 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_out has 0 job(s) [2021-07-12 09:07:47] 2021-07-12 13:06:47,034 | INFO | pilot.util.queuehandling | queue_report | queue failed_jobs has 0 job(s) [2021-07-12 09:07:47] 2021-07-12 13:06:47,034 | INFO | pilot.util.queuehandling | queue_report | queue failed_payloads has 0 job(s) [2021-07-12 09:07:47] 2021-07-12 13:06:47,034 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_in has 0 job(s) [2021-07-12 09:07:47] 2021-07-12 13:06:47,034 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_out has 0 job(s) [2021-07-12 09:07:47] 2021-07-12 13:06:47,034 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobs has 0 job(s) [2021-07-12 09:07:47] 2021-07-12 13:06:47,034 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s) [2021-07-12 09:07:47] 2021-07-12 13:06:47,035 | INFO | pilot.control.job | has_job_completed | job 5118067527 has completed (purged errors) [2021-07-12 09:07:47] 2021-07-12 13:06:47,035 | INFO | pilot.util.processes | cleanup | overall cleanup function is called [2021-07-12 09:07:47] 2021-07-12 13:06:47,039 | DEBUG | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc-client/slots/29/PanDA_Pilot-5118067527 [2021-07-12 09:07:47] 2021-07-12 13:06:48,041 | INFO | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [48686] [2021-07-12 09:07:47] 2021-07-12 13:06:48,041 | INFO | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 48686 [2021-07-12 09:07:47] 2021-07-12 13:06:48,041 | INFO | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes [2021-07-12 09:07:47] 2021-07-12 13:06:49,044 | INFO | pilot.util.processes | cleanup | collected zombie processes [2021-07-12 09:07:47] 2021-07-12 13:06:49,044 | INFO | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=48686 [2021-07-12 09:07:47] 2021-07-12 13:06:49,386 | INFO | pilot.util.processes | kill_processes | process IDs to be killed: [48686] (in reverse order) [2021-07-12 09:07:47] 2021-07-12 13:06:49,682 | WARNING | pilot.util.processes | kill_processes | found no corresponding commands to process id(s) [2021-07-12 09:07:47] 2021-07-12 13:06:49,682 | INFO | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs [2021-07-12 09:07:47] 2021-07-12 13:06:49,683 | DEBUG | pilot.util.queuehandling | purge_queue | queue purged [2021-07-12 09:07:47] 2021-07-12 13:06:49,683 | INFO | pilot.control.job | retrieve | ready for new job [2021-07-12 09:07:47] 2021-07-12 13:06:49,683 | INFO | root | retrieve | pilot has finished for previous job - re-establishing logging [2021-07-12 09:07:47] 2021-07-12 13:06:49,684 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2021-07-12 09:07:47] 2021-07-12 13:06:49,684 | INFO | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 2.12.2 (1) *** [2021-07-12 09:07:47] 2021-07-12 13:06:49,685 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2021-07-12 09:07:47] 2021-07-12 13:06:49,685 | INFO | pilot.util.auxiliary | pilot_version_banner | [2021-07-12 09:07:47] 2021-07-12 13:06:49,710 | INFO | pilot.util.auxiliary | display_architecture_info | architecture information: [2021-07-12 09:07:47] 2021-07-12 13:06:50,090 | INFO | pilot.util.auxiliary | display_architecture_info | [2021-07-12 09:07:47] LSB Version: :core-4.1-amd64:core-4.1-noarch [2021-07-12 09:07:47] Distributor ID: CentOS [2021-07-12 09:07:47] Description: CentOS Linux release 7.8.2003 (Core) [2021-07-12 09:07:47] Release: 7.8.2003 [2021-07-12 09:07:47] Codename: Core [2021-07-12 09:07:47] 2021-07-12 13:06:50,090 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2021-07-12 09:07:47] 2021-07-12 13:06:50,592 | DEBUG | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc-client/slots/29 [2021-07-12 09:07:47] 2021-07-12 13:06:50,734 | INFO | pilot.util.monitoring | check_local_space | sufficient remaining disk space (47860154368 B) [2021-07-12 09:07:47] 2021-07-12 13:06:50,734 | WARNING | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job [2021-07-12 09:07:47] 2021-07-12 13:06:50,735 | DEBUG | pilot.control.job | retrieve | will not set job_aborted yet [2021-07-12 09:07:47] 2021-07-12 13:06:50,735 | DEBUG | pilot.control.job | retrieve | [job] retrieve thread has finished [2021-07-12 09:07:47] 2021-07-12 13:06:50,736 | WARNING | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration [2021-07-12 09:07:47] 2021-07-12 13:06:50,737 | DEBUG | pilot.control.data | control | data control ending since graceful_stop has been set [2021-07-12 09:07:47] 2021-07-12 13:06:50,737 | DEBUG | pilot.control.data | control | will not set job_aborted yet [2021-07-12 09:07:47] 2021-07-12 13:06:50,737 | DEBUG | pilot.control.data | control | [data] control thread has finished [2021-07-12 09:07:47] 2021-07-12 13:06:50,771 | DEBUG | pilot.control.payload | control | payload control ending since graceful_stop has been set [2021-07-12 09:07:47] 2021-07-12 13:06:50,771 | DEBUG | pilot.control.payload | control | will not set job_aborted yet [2021-07-12 09:07:47] 2021-07-12 13:06:50,771 | DEBUG | pilot.control.payload | control | [payload] control thread has finished [2021-07-12 09:07:47] 2021-07-12 13:06:50,924 | DEBUG | pilot.control.payload | validate_pre | will not set job_aborted yet [2021-07-12 09:07:47] 2021-07-12 13:06:50,925 | INFO | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished [2021-07-12 09:07:47] 2021-07-12 13:06:51,076 | DEBUG | pilot.control.data | copytool_in | will not set job_aborted yet [2021-07-12 09:07:47] 2021-07-12 13:06:51,077 | DEBUG | pilot.control.data | copytool_in | [data] copytool_in thread has finished [2021-07-12 09:07:47] 2021-07-12 13:06:51,090 | DEBUG | pilot.control.payload | validate_post | will not set job_aborted yet [2021-07-12 09:07:47] 2021-07-12 13:06:51,091 | INFO | pilot.control.payload | validate_post | [payload] validate_post thread has finished [2021-07-12 09:07:47] 2021-07-12 13:06:51,177 | DEBUG | pilot.control.job | validate | will not set job_aborted yet [2021-07-12 09:07:47] 2021-07-12 13:06:51,177 | DEBUG | pilot.control.job | validate | [job] validate thread has finished [2021-07-12 09:07:47] 2021-07-12 13:06:51,332 | INFO | pilot.control.monitor | control | [monitor] control thread has ended [2021-07-12 09:07:47] 2021-07-12 13:06:51,736 | DEBUG | pilot.control.data | copytool_out | will not set job_aborted yet [2021-07-12 09:07:47] 2021-07-12 13:06:51,737 | DEBUG | pilot.control.data | copytool_out | [data] copytool_out thread has finished [2021-07-12 09:07:47] 2021-07-12 13:06:51,812 | DEBUG | pilot.control.job | create_data_payload | will not set job_aborted yet [2021-07-12 09:07:47] 2021-07-12 13:06:51,813 | DEBUG | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished [2021-07-12 09:07:47] 2021-07-12 13:06:51,846 | DEBUG | pilot.control.job | control | job control ending since graceful_stop has been set [2021-07-12 09:07:47] 2021-07-12 13:06:51,847 | DEBUG | pilot.control.job | control | will not set job_aborted yet [2021-07-12 09:07:47] 2021-07-12 13:06:51,847 | DEBUG | pilot.control.job | control | [job] control thread has finished [2021-07-12 09:07:47] 2021-07-12 13:06:51,920 | WARNING | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration [2021-07-12 09:07:47] 2021-07-12 13:06:51,920 | DEBUG | pilot.control.job | queue_monitor | will not set job_aborted yet [2021-07-12 09:07:47] 2021-07-12 13:06:51,921 | DEBUG | pilot.control.job | queue_monitor | [job] queue monitor thread has finished [2021-07-12 09:07:47] 2021-07-12 13:06:51,976 | DEBUG | pilot.control.payload | execute_payloads | will not set job_aborted yet [2021-07-12 09:07:47] 2021-07-12 13:06:51,976 | INFO | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished [2021-07-12 09:07:47] 2021-07-12 13:06:52,088 | DEBUG | pilot.control.payload | failed_post | will not set job_aborted yet [2021-07-12 09:07:47] 2021-07-12 13:06:52,088 | INFO | pilot.control.payload | failed_post | [payload] failed_post thread has finished [2021-07-12 09:07:47] 2021-07-12 13:06:52,584 | WARNING | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration [2021-07-12 09:07:47] 2021-07-12 13:06:55,596 | DEBUG | pilot.control.data | queue_monitoring | will not set job_aborted yet [2021-07-12 09:07:47] 2021-07-12 13:06:55,597 | DEBUG | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished [2021-07-12 09:07:47] 2021-07-12 13:07:46,392 | WARNING | pilot.control.job | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 73 s) [2021-07-12 09:07:47] 2021-07-12 13:07:46,393 | DEBUG | pilot.util.processes | threads_aborted | aborting since the last relevant thread is about to finish [2021-07-12 09:07:47] 2021-07-12 13:07:46,393 | DEBUG | pilot.control.job | job_monitor | will proceed to set job_aborted [2021-07-12 09:07:47] 2021-07-12 13:07:46,393 | DEBUG | pilot.control.job | job_monitor | [job] job monitor thread has finished [2021-07-12 09:07:47] 2021-07-12 13:07:47,172 | INFO | pilot.workflow.generic | run | end of generic workflow (traces error code: 0) [2021-07-12 09:07:47] 2021-07-12 13:07:47,173 | INFO | root | wrap_up | traces error code: 0 [2021-07-12 09:07:47] 2021-07-12 13:07:47,173 | INFO | root | wrap_up | pilot has finished [2021-07-12 09:07:47] 2021-07-12 13:07:47,306 [wrapper] ==== pilot stdout END ==== [2021-07-12 09:07:47] 2021-07-12 13:07:47,315 [wrapper] ==== wrapper stdout RESUME ==== [2021-07-12 09:07:47] 2021-07-12 13:07:47,323 [wrapper] Pilot exit status: 0 [2021-07-12 09:07:47] 2021-07-12 13:07:47,366 [wrapper] pandaids: 5118067527 [2021-07-12 09:07:47] 2021-07-12 13:07:47,382 [wrapper] apfmon messages muted [2021-07-12 09:07:47] 2021-07-12 13:07:47,390 [wrapper] Test setup, not cleaning [2021-07-12 09:07:47] 2021-07-12 13:07:47,400 [wrapper] ==== wrapper stdout END ==== [2021-07-12 09:07:47] 2021-07-12 13:07:47,409 [wrapper] ==== wrapper stderr END ==== [2021-07-12 09:07:47] 2021-07-12 13:07:47,425 [wrapper] wrapperexiting ec=0, duration=2075 [2021-07-12 09:07:47] 2021-07-12 13:07:47,434 [wrapper] apfmon messages muted [2021-07-12 09:07:47] *** Error codes and diagnostics *** [2021-07-12 09:07:47] "exeErrorCode": 0, [2021-07-12 09:07:47] "exeErrorDiag": "", [2021-07-12 09:07:47] "pilotErrorCode": 0, [2021-07-12 09:07:47] "pilotErrorDiag": "", [2021-07-12 09:07:47] *** Listing of results directory *** [2021-07-12 09:07:47] total 43964 [2021-07-12 09:07:47] -rw-r--r-- 1 boinc boinc 334707 Jul 12 07:31 pilot2.tar.gz [2021-07-12 09:07:47] -rwx------ 1 boinc boinc 20589 Jul 12 08:12 runpilot2-wrapper.sh [2021-07-12 09:07:47] -rw-r--r-- 1 boinc boinc 3214 Jul 12 08:13 queuedata.json [2021-07-12 09:07:47] -rw-r--r-- 1 boinc boinc 107 Jul 12 08:33 wrapper_26015_x86_64-pc-linux-gnu [2021-07-12 09:07:47] -rwxr-xr-x 1 boinc boinc 6966 Jul 12 08:33 run_atlas [2021-07-12 09:07:47] -rw-r--r-- 1 boinc boinc 112 Jul 12 08:33 job.xml [2021-07-12 09:07:47] drwxrwx--x 2 boinc boinc 4096 Jul 12 08:33 shared [2021-07-12 09:07:47] -rw-r--r-- 1 boinc boinc 6188 Jul 12 08:33 init_data.xml [2021-07-12 09:07:47] -rw-r--r-- 1 boinc boinc 0 Jul 12 08:33 boinc_lockfile [2021-07-12 09:07:47] -rw-r--r-- 1 boinc boinc 16583 Jul 12 08:33 start_atlas.sh [2021-07-12 09:07:47] -rw-r--r-- 1 boinc boinc 344102 Jul 12 08:33 input.tar.gz [2021-07-12 09:07:47] -rw-r--r-- 1 boinc boinc 38184411 Jul 12 08:33 EVNT.04972714._000028.pool.root.1 [2021-07-12 09:07:47] -rw-r--r-- 1 boinc boinc 2572 Jul 12 08:33 pandaJob.out [2021-07-12 09:07:47] -rw------- 1 boinc boinc 1066009 Jul 12 08:33 agis_schedconf.cvmfs.json [2021-07-12 09:07:47] -rw------- 1 boinc boinc 1962599 Jul 12 08:33 cric_ddmendpoints.json [2021-07-12 09:07:47] drwx------ 4 boinc boinc 4096 Jul 12 08:33 pilot2 [2021-07-12 09:07:47] -rw-r--r-- 1 boinc boinc 533 Jul 12 09:05 boinc_task_state.xml [2021-07-12 09:07:47] -rw------- 1 boinc boinc 1044060 Jul 12 09:05 output.1.76293aef-4220-4831-b116-95645a639558_96132.pool.root [2021-07-12 09:07:47] -rw------- 1 boinc boinc 1008 Jul 12 09:06 memory_monitor_summary.json [2021-07-12 09:07:47] -rw------- 1 boinc boinc 182512 Jul 12 09:06 76293aef-4220-4831-b116-95645a639558_96132.1.job.log.tgz [2021-07-12 09:07:47] -rw------- 1 boinc boinc 8568 Jul 12 09:06 heartbeat.json [2021-07-12 09:07:47] -rw-r--r-- 1 boinc boinc 25 Jul 12 09:07 wrapper_checkpoint.txt [2021-07-12 09:07:47] -rw-r--r-- 1 boinc boinc 8192 Jul 12 09:07 boinc_mmap_file [2021-07-12 09:07:47] -rw------- 1 boinc boinc 7363 Jul 12 09:07 pilotlog.txt [2021-07-12 09:07:47] -rw------- 1 boinc boinc 223610 Jul 12 09:07 76293aef-4220-4831-b116-95645a639558_96132.1.job.log [2021-07-12 09:07:47] -rw------- 1 boinc boinc 536 Jul 12 09:07 output.list [2021-07-12 09:07:47] -rw-r--r-- 1 boinc boinc 748 Jul 12 09:07 runtime_log [2021-07-12 09:07:47] -rw-r--r-- 1 boinc boinc 9441 Jul 12 09:07 runtime_log.err [2021-07-12 09:07:47] -rw------- 1 boinc boinc 1474560 Jul 12 09:07 result.tar.gz [2021-07-12 09:07:47] -rw------- 1 boinc boinc 562 Jul 12 09:07 hPFNDm9y9Mzn7Olcko1bjSoqABFKDmABFKDmumdXDm1tFKDmK0pDSo.diag [2021-07-12 09:07:47] -rw-r--r-- 1 boinc boinc 29594 Jul 12 09:07 stderr.txt [2021-07-12 09:07:47] HITS file was successfully produced: [2021-07-12 09:07:47] -rw------- 1 boinc boinc 1044060 Jul 12 09:05 shared/HITS.pool.root.1 [2021-07-12 09:07:47] *** Contents of shared directory: *** [2021-07-12 09:07:47] total 40116 [2021-07-12 09:07:47] -rw-r--r-- 1 boinc boinc 16583 Jul 12 08:33 start_atlas.sh [2021-07-12 09:07:47] -rw-r--r-- 1 boinc boinc 344102 Jul 12 08:33 input.tar.gz [2021-07-12 09:07:47] -rw-r--r-- 1 boinc boinc 38184411 Jul 12 08:33 ATLAS.root_0 [2021-07-12 09:07:47] -rw------- 1 boinc boinc 1044060 Jul 12 09:05 HITS.pool.root.1 [2021-07-12 09:07:47] -rw------- 1 boinc boinc 1474560 Jul 12 09:07 result.tar.gz 09:07:49 (37553): run_atlas exited; CPU time 1057.572510 09:07:49 (37553): called boinc_finish(0) </stderr_txt> ]]>
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