Name | HsxNDm8n4Nzn7Olcko1bjSoqABFKDmABFKDmumdXDmnzFKDmwVc8Wo_0 |
Workunit | 2104363 |
Created | 15 Jul 2021, 0:53:31 UTC |
Sent | 15 Jul 2021, 1:00:07 UTC |
Report deadline | 22 Jul 2021, 1:00:07 UTC |
Received | 15 Jul 2021, 2:43:17 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 4357 |
Run time | 1 hours 41 min 3 sec |
CPU time | 50 min 51 sec |
Validate state | Valid |
Credit | 22.99 |
Device peak FLOPS | 3.04 GFLOPS |
Application version | ATLAS Simulation v1.04 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.50 GB |
Peak swap size | 2.16 GB |
Peak disk usage | 79.66 MB |
<core_client_version>7.9.3</core_client_version> <![CDATA[ <stderr_txt> 21:01:03 (138924): wrapper (7.7.26015): starting 21:01:03 (138924): wrapper: running run_atlas (--nthreads 1) [2021-07-14 21:01:03] Arguments: --nthreads 1 [2021-07-14 21:01:03] Threads: 1 [2021-07-14 21:01:03] Checking for CVMFS [2021-07-14 21:01:07] Probing /cvmfs/atlas.cern.ch... OK [2021-07-14 21:01:11] Probing /cvmfs/atlas-condb.cern.ch... OK [2021-07-14 21:01:11] Running cvmfs_config stat atlas.cern.ch [2021-07-14 21:01:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2021-07-14 21:01:12] 2.9.0.0 139497 0 24732 88381 3 1 2312871 4194304 0 130560 0 0 0.000 529 777 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 0 [2021-07-14 21:01:12] CVMFS is ok [2021-07-14 21:01:12] Efficiency of ATLAS tasks can be improved by the following measure(s): [2021-07-14 21:01:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io. [2021-07-14 21:01:12] Small home clusters do not require a local http proxy but it is suggested if [2021-07-14 21:01:12] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks. [2021-07-14 21:01:12] Further information can be found at the LHC@home message board. [2021-07-14 21:01:12] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2021-07-14 21:01:12] Checking for singularity binary... [2021-07-14 21:01:12] Using singularity found in PATH at /usr/local/bin/singularity [2021-07-14 21:01:12] Running /usr/local/bin/singularity --version [2021-07-14 21:01:12] singularity version 3.7.2+10-ga969f0f8c [2021-07-14 21:01:12] Checking singularity works with /usr/local/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2021-07-14 21:01:13] E5-2670 [2021-07-14 21:01:13] Singularity works [2021-07-14 21:01:13] Starting ATLAS job with PandaID=5120403588 [2021-07-14 21:01:13] Running command: /usr/local/bin/singularity exec --pwd /var/lib/boinc-client/slots/34 -B /cvmfs,/var /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2021-07-14 22:42:04] *** The last 200 lines of the pilot log: *** [2021-07-14 22:42:04] "reportVersion": "1.0.0", [2021-07-14 22:42:04] "resource": { [2021-07-14 22:42:04] "cpuUnit": "seconds", [2021-07-14 22:42:04] "externalsCpuTime": 35, [2021-07-14 22:42:04] "memUnit": "kB", [2021-07-14 22:42:04] "transformCpuTime": 10, [2021-07-14 22:42:04] "wallTime": 5765 [2021-07-14 22:42:04] } [2021-07-14 22:42:04] } [2021-07-14 22:42:04] 2021-07-15 02:41:32,924 | DEBUG | pilot.user.atlas.common | update_server | no need to update logstash for this job [2021-07-14 22:42:04] 2021-07-15 02:41:32,924 | INFO | pilot.control.job | send_state | pilot will not update the server (heartbeat message will be written to file) [2021-07-14 22:42:04] 2021-07-15 02:41:32,924 | INFO | pilot.control.job | send_state | job 5120403588 has finished - writing final server update [2021-07-14 22:42:04] 2021-07-15 02:41:32,924 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics_string | job definition core count: 1 [2021-07-14 22:42:04] 2021-07-15 02:41:32,925 | WARNING | pilot.user.atlas.common | get_executor_dictionary | no such key: executor [2021-07-14 22:42:04] 2021-07-15 02:41:32,925 | WARNING | pilot.user.atlas.common | get_executor_dictionary | no such key: executor [2021-07-14 22:42:04] 2021-07-15 02:41:32,925 | INFO | pilot.user.atlas.jobmetrics | get_job_metrics_string | will not add max space = -36328516 B to job metrics [2021-07-14 22:42:04] 2021-07-15 02:41:32,927 | DEBUG | pilot.api.analytics | get_fitted_data | removing tails from data to be fitted [2021-07-14 22:42:04] 2021-07-15 02:41:32,927 | INFO | pilot.api.analytics | get_fitted_data | fitting pss+swap vs Time [2021-07-14 22:42:04] 2021-07-15 02:41:32,928 | INFO | pilot.api.analytics | get_fitted_data | current memory leak: 227.70 B/s (using 89 data points, chi2=1567338) [2021-07-14 22:42:04] 2021-07-15 02:41:32,928 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics | job metrics="actualCoreCount=6 nEvents=2 leak=227.70 chi2=1567338 eventnumber=12001" [2021-07-14 22:42:04] 2021-07-15 02:41:32,929 | INFO | pilot.control.job | get_data_structure | mean actualcorecount: 7.405063 [2021-07-14 22:42:04] 2021-07-15 02:41:32,929 | INFO | pilot.control.job | get_data_structure | total number of processed events: 2 (read) [2021-07-14 22:42:04] 2021-07-15 02:41:32,950 | INFO | pilot.util.container | execute | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2021-07-14 22:42:04] 2021-07-15 02:41:33,057 | INFO | pilot.user.atlas.utilities | get_memory_values | using path: /var/lib/boinc-client/slots/34/PanDA_Pilot-5120403588/memory_monitor_summary.json (trf n [2021-07-14 22:42:04] 2021-07-15 02:41:33,060 | DEBUG | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'Avg': {'nprocs': 3.958, 'nthreads': 4.927, 'pss': 994952.0, 'rchar': 55069.0, ' [2021-07-14 22:42:04] 2021-07-15 02:41:33,060 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard info from prmon json [2021-07-14 22:42:04] 2021-07-15 02:41:33,060 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard memory fields from prmon json [2021-07-14 22:42:04] 2021-07-15 02:41:33,060 | INFO | pilot.util.timing | timing_report | .............................. [2021-07-14 22:42:04] 2021-07-15 02:41:33,061 | INFO | pilot.util.timing | timing_report | . Timing measurements: [2021-07-14 22:42:04] 2021-07-15 02:41:33,061 | INFO | pilot.util.timing | timing_report | . get job = 0 s [2021-07-14 22:42:04] 2021-07-15 02:41:33,061 | INFO | pilot.util.timing | timing_report | . initial setup = 1 s [2021-07-14 22:42:04] 2021-07-15 02:41:33,061 | INFO | pilot.util.timing | timing_report | . payload setup = 71 s [2021-07-14 22:42:04] 2021-07-15 02:41:33,061 | INFO | pilot.util.timing | timing_report | . total setup = 72 s [2021-07-14 22:42:04] 2021-07-15 02:41:33,061 | INFO | pilot.util.timing | timing_report | . stage-in = 0 s [2021-07-14 22:42:04] 2021-07-15 02:41:33,061 | INFO | pilot.util.timing | timing_report | . payload execution = 5853 s [2021-07-14 22:42:04] 2021-07-15 02:41:33,061 | INFO | pilot.util.timing | timing_report | . stage-out = 1 s [2021-07-14 22:42:04] 2021-07-15 02:41:33,061 | INFO | pilot.util.timing | timing_report | .............................. [2021-07-14 22:42:04] 2021-07-15 02:41:33,062 | DEBUG | pilot.control.job | send_state | is_harvester_mode(args) : False [2021-07-14 22:42:04] 2021-07-15 02:41:33,063 | DEBUG | pilot.control.job | write_heartbeat_to_file | heartbeat dictionary: {'jobId': '5120403588', 'state': 'finished', 'timestamp': '2021-07-14T22:41:32 [2021-07-14 22:42:04] 2021-07-15 02:41:33,063 | DEBUG | pilot.control.job | write_heartbeat_to_file | wrote heartbeat to file /var/lib/boinc-client/slots/34/heartbeat.json [2021-07-14 22:42:04] 2021-07-15 02:41:33,064 | DEBUG | pilot.control.job | queue_monitor | job 5120403588 was dequeued from the monitored payloads queue [2021-07-14 22:42:04] 2021-07-15 02:41:33,238 | DEBUG | pilot.control.job | queue_monitor | tmp job object deleted [2021-07-14 22:42:04] 2021-07-15 02:41:33,300 | INFO | pilot.control.job | make_job_report | [2021-07-14 22:42:04] 2021-07-15 02:41:33,300 | INFO | pilot.control.job | make_job_report | job summary report [2021-07-14 22:42:04] 2021-07-15 02:41:33,301 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2021-07-14 22:42:04] 2021-07-15 02:41:33,301 | INFO | pilot.control.job | make_job_report | PanDA job id: 5120403588 [2021-07-14 22:42:04] 2021-07-15 02:41:33,301 | INFO | pilot.control.job | make_job_report | task id: NULL [2021-07-14 22:42:04] 2021-07-15 02:41:33,301 | INFO | pilot.control.job | make_job_report | errors: (none) [2021-07-14 22:42:04] 2021-07-15 02:41:33,301 | INFO | pilot.control.job | make_job_report | status: LOG_TRANSFER = DONE [2021-07-14 22:42:04] 2021-07-15 02:41:33,301 | INFO | pilot.control.job | make_job_report | pilot state: finished [2021-07-14 22:42:04] 2021-07-15 02:41:33,301 | INFO | pilot.control.job | make_job_report | transexitcode: 0 [2021-07-14 22:42:04] 2021-07-15 02:41:33,301 | INFO | pilot.control.job | make_job_report | exeerrorcode: 0 [2021-07-14 22:42:04] 2021-07-15 02:41:33,301 | INFO | pilot.control.job | make_job_report | exeerrordiag: [2021-07-14 22:42:04] 2021-07-15 02:41:33,302 | INFO | pilot.control.job | make_job_report | exitcode: 0 [2021-07-14 22:42:04] 2021-07-15 02:41:33,302 | INFO | pilot.control.job | make_job_report | exitmsg: OK [2021-07-14 22:42:04] 2021-07-15 02:41:33,302 | INFO | pilot.control.job | make_job_report | cpuconsumptiontime: 3202 s [2021-07-14 22:42:04] 2021-07-15 02:41:33,302 | INFO | pilot.control.job | make_job_report | nevents: 2 [2021-07-14 22:42:04] 2021-07-15 02:41:33,302 | INFO | pilot.control.job | make_job_report | neventsw: 0 [2021-07-14 22:42:04] 2021-07-15 02:41:33,302 | INFO | pilot.control.job | make_job_report | pid: 7799 [2021-07-14 22:42:04] 2021-07-15 02:41:33,302 | INFO | pilot.control.job | make_job_report | pgrp: 7799 [2021-07-14 22:42:04] 2021-07-15 02:41:33,302 | INFO | pilot.control.job | make_job_report | corecount: 1 [2021-07-14 22:42:04] 2021-07-15 02:41:33,303 | INFO | pilot.control.job | make_job_report | event service: False [2021-07-14 22:42:04] 2021-07-15 02:41:33,303 | INFO | pilot.control.job | make_job_report | sizes: {24044044: 3859442, 24044045: 3859555, 24044046: 3859721, 24044056: 3859663, 24049985: 388398 [2021-07-14 22:42:04] 2021-07-15 02:41:33,303 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2021-07-14 22:42:04] 2021-07-15 02:41:33,303 | INFO | pilot.control.job | make_job_report | [2021-07-14 22:42:04] 2021-07-15 02:41:33,303 | DEBUG | pilot.control.job | has_job_completed | ls -lF /var/lib/boinc-client/slots/34: [2021-07-14 22:42:04] [2021-07-14 22:42:04] 2021-07-15 02:41:33,303 | INFO | pilot.util.container | execute | executing command: ls -lF /var/lib/boinc-client/slots/34 [2021-07-14 22:42:04] 2021-07-15 02:41:33,336 | DEBUG | pilot.control.job | has_job_completed | total 46344 [2021-07-14 22:42:04] -rw------- 1 boinc boinc 1067131 Jul 14 21:02 agis_schedconf.cvmfs.json [2021-07-14 22:42:04] -rw-r--r-- 1 boinc boinc 0 Jul 14 21:01 boinc_lockfile [2021-07-14 22:42:04] -rw-r--r-- 1 boinc boinc 8192 Jul 14 22:41 boinc_mmap_file [2021-07-14 22:42:04] -rw-r--r-- 1 boinc boinc 534 Jul 14 22:40 boinc_task_state.xml [2021-07-14 22:42:04] -rw------- 1 boinc boinc 1963505 Jul 14 21:02 cric_ddmendpoints.json [2021-07-14 22:42:04] -rw------- 1 boinc boinc 413247 Jul 14 22:41 eb048e45-e1e6-4483-a305-efefb9976723_40415.1.job.log [2021-07-14 22:42:04] -rw------- 1 boinc boinc 193644 Jul 14 22:41 eb048e45-e1e6-4483-a305-efefb9976723_40415.1.job.log.tgz [2021-07-14 22:42:04] -rw-r--r-- 1 boinc boinc 37438704 Jul 14 21:01 EVNT.04972714._000033.pool.root.1 [2021-07-14 22:42:04] -rw------- 1 boinc boinc 7810 Jul 14 22:41 heartbeat.json [2021-07-14 22:42:04] -rw------- 1 boinc boinc 130 Jul 14 21:01 HsxNDm8n4Nzn7Olcko1bjSoqABFKDmABFKDmumdXDmnzFKDmwVc8Wo.diag [2021-07-14 22:42:04] -rw-r--r-- 1 boinc boinc 6188 Jul 14 21:01 init_data.xml [2021-07-14 22:42:04] -rw-r--r-- 1 boinc boinc 344148 Jul 14 21:01 input.tar.gz [2021-07-14 22:42:04] -rw-r--r-- 1 boinc boinc 112 Jul 14 21:01 job.xml [2021-07-14 22:42:04] -rw------- 1 boinc boinc 1014 Jul 14 22:41 memory_monitor_summary.json [2021-07-14 22:42:04] -rw------- 1 boinc boinc 5136212 Jul 14 22:39 output.1.eb048e45-e1e6-4483-a305-efefb9976723_40415.pool.root [2021-07-14 22:42:04] -rw------- 1 boinc boinc 536 Jul 14 22:41 output.list [2021-07-14 22:42:04] -rw-r--r-- 1 boinc boinc 2650 Jul 14 21:01 pandaJob.out [2021-07-14 22:42:04] drwxrwx--- 2 boinc boinc 4096 Jul 14 22:41 PanDA_Pilot-5120403588/ [2021-07-14 22:42:04] drwx------ 4 boinc boinc 4096 Jul 14 21:02 pilot2/ [2021-07-14 22:42:04] -rw-r--r-- 1 boinc boinc 334707 Jul 14 20:22 pilot2.tar.gz [2021-07-14 22:42:04] -rw------- 1 boinc boinc 394276 Jul 14 22:41 pilotlog.txt [2021-07-14 22:42:04] -rw-r--r-- 1 boinc boinc 4534 Jul 14 20:53 queuedata.json [2021-07-14 22:42:04] -rwxr-xr-x 1 boinc boinc 6966 Jul 14 21:01 run_atlas* [2021-07-14 22:42:04] -rwx------ 1 boinc boinc 20591 Jul 14 20:53 runpilot2-wrapper.sh* [2021-07-14 22:42:04] -rw-r--r-- 1 boinc boinc 407 Jul 14 21:01 runtime_log [2021-07-14 22:42:04] -rw-r--r-- 1 boinc boinc 5574 Jul 14 21:01 runtime_log.err [2021-07-14 22:42:04] drwxrwx--x 2 boinc boinc 4096 Jul 14 21:01 shared/ [2021-07-14 22:42:04] -rw-r--r-- 1 boinc boinc 16551 Jul 14 21:01 start_atlas.sh [2021-07-14 22:42:04] -rw-r--r-- 1 boinc boinc 2198 Jul 14 21:01 stderr.txt [2021-07-14 22:42:04] -rw-r--r-- 1 boinc boinc 107 Jul 14 21:01 wrapper_26015_x86_64-pc-linux-gnu [2021-07-14 22:42:04] -rw-r--r-- 1 boinc boinc 26 Jul 14 22:41 wrapper_checkpoint.txt [2021-07-14 22:42:04] 2021-07-15 02:41:33,336 | INFO | pilot.util.queuehandling | queue_report | queue jobs has 0 job(s) [2021-07-14 22:42:04] 2021-07-15 02:41:33,336 | INFO | pilot.util.queuehandling | queue_report | queue payloads has 0 job(s) [2021-07-14 22:42:04] 2021-07-15 02:41:33,336 | INFO | pilot.util.queuehandling | queue_report | queue data_in has 0 job(s) [2021-07-14 22:42:04] 2021-07-15 02:41:33,337 | INFO | pilot.util.queuehandling | queue_report | queue data_out has 0 job(s) [2021-07-14 22:42:04] 2021-07-15 02:41:33,337 | INFO | pilot.util.queuehandling | queue_report | queue current_data_in has 0 job(s) [2021-07-14 22:42:04] 2021-07-15 02:41:33,337 | INFO | pilot.util.queuehandling | queue_report | queue validated_jobs has 0 job(s) [2021-07-14 22:42:04] 2021-07-15 02:41:33,337 | INFO | pilot.util.queuehandling | queue_report | queue validated_payloads has 0 job(s) [2021-07-14 22:42:04] 2021-07-15 02:41:33,337 | INFO | pilot.util.queuehandling | queue_report | queue monitored_payloads has 0 job(s) [2021-07-14 22:42:04] 2021-07-15 02:41:33,337 | INFO | pilot.util.queuehandling | queue_report | queue finished_jobs has 0 job(s) [2021-07-14 22:42:04] 2021-07-15 02:41:33,337 | INFO | pilot.util.queuehandling | queue_report | queue finished_payloads has 0 job(s) [2021-07-14 22:42:04] 2021-07-15 02:41:33,337 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_in has 1 job(s) [2021-07-14 22:42:04] 2021-07-15 02:41:33,337 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_out has 0 job(s) [2021-07-14 22:42:04] 2021-07-15 02:41:33,337 | INFO | pilot.util.queuehandling | queue_report | queue failed_jobs has 0 job(s) [2021-07-14 22:42:04] 2021-07-15 02:41:33,337 | INFO | pilot.util.queuehandling | queue_report | queue failed_payloads has 0 job(s) [2021-07-14 22:42:04] 2021-07-15 02:41:33,337 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_in has 0 job(s) [2021-07-14 22:42:04] 2021-07-15 02:41:33,338 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_out has 0 job(s) [2021-07-14 22:42:04] 2021-07-15 02:41:33,338 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobs has 0 job(s) [2021-07-14 22:42:04] 2021-07-15 02:41:33,338 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s) [2021-07-14 22:42:04] 2021-07-15 02:41:33,338 | INFO | pilot.control.job | has_job_completed | job 5120403588 has completed (purged errors) [2021-07-14 22:42:04] 2021-07-15 02:41:33,338 | INFO | pilot.util.processes | cleanup | overall cleanup function is called [2021-07-14 22:42:04] 2021-07-15 02:41:33,340 | DEBUG | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc-client/slots/34/PanDA_Pilot-5120403588 [2021-07-14 22:42:04] 2021-07-15 02:41:34,344 | INFO | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [7799] [2021-07-14 22:42:04] 2021-07-15 02:41:34,344 | INFO | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 7799 [2021-07-14 22:42:04] 2021-07-15 02:41:34,345 | INFO | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes [2021-07-14 22:42:04] 2021-07-15 02:41:35,349 | INFO | pilot.util.processes | cleanup | collected zombie processes [2021-07-14 22:42:04] 2021-07-15 02:41:35,349 | INFO | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=7799 [2021-07-14 22:42:04] 2021-07-15 02:41:35,559 | INFO | pilot.util.processes | kill_processes | process IDs to be killed: [7799] (in reverse order) [2021-07-14 22:42:04] 2021-07-15 02:41:35,721 | WARNING | pilot.util.processes | kill_processes | found no corresponding commands to process id(s) [2021-07-14 22:42:04] 2021-07-15 02:41:35,722 | INFO | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs [2021-07-14 22:42:04] 2021-07-15 02:41:35,722 | DEBUG | pilot.util.queuehandling | purge_queue | queue purged [2021-07-14 22:42:04] 2021-07-15 02:41:35,722 | INFO | pilot.control.job | retrieve | ready for new job [2021-07-14 22:42:04] 2021-07-15 02:41:35,722 | INFO | root | retrieve | pilot has finished for previous job - re-establishing logging [2021-07-14 22:42:04] 2021-07-15 02:41:35,724 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2021-07-14 22:42:04] 2021-07-15 02:41:35,724 | INFO | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 2.12.2 (1) *** [2021-07-14 22:42:04] 2021-07-15 02:41:35,724 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2021-07-14 22:42:04] 2021-07-15 02:41:35,724 | INFO | pilot.util.auxiliary | pilot_version_banner | [2021-07-14 22:42:04] 2021-07-15 02:41:35,750 | INFO | pilot.util.auxiliary | display_architecture_info | architecture information: [2021-07-14 22:42:04] 2021-07-15 02:41:35,993 | INFO | pilot.util.auxiliary | display_architecture_info | [2021-07-14 22:42:04] LSB Version: :core-4.1-amd64:core-4.1-noarch [2021-07-14 22:42:04] Distributor ID: CentOS [2021-07-14 22:42:04] Description: CentOS Linux release 7.8.2003 (Core) [2021-07-14 22:42:04] Release: 7.8.2003 [2021-07-14 22:42:04] Codename: Core [2021-07-14 22:42:04] 2021-07-15 02:41:35,993 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2021-07-14 22:42:04] 2021-07-15 02:41:36,496 | DEBUG | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc-client/slots/34 [2021-07-14 22:42:04] 2021-07-15 02:41:36,541 | INFO | pilot.util.monitoring | check_local_space | sufficient remaining disk space (52393148416 B) [2021-07-14 22:42:04] 2021-07-15 02:41:36,541 | WARNING | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job [2021-07-14 22:42:04] 2021-07-15 02:41:36,542 | DEBUG | pilot.control.job | retrieve | will not set job_aborted yet [2021-07-14 22:42:04] 2021-07-15 02:41:36,542 | WARNING | pilot.control.monitor | control | aborting monitor loop since graceful_stop has been set [2021-07-14 22:42:04] 2021-07-15 02:41:36,542 | WARNING | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration [2021-07-14 22:42:04] 2021-07-15 02:41:36,542 | DEBUG | pilot.control.job | retrieve | [job] retrieve thread has finished [2021-07-14 22:42:04] 2021-07-15 02:41:36,543 | INFO | pilot.control.monitor | control | [monitor] control thread has ended [2021-07-14 22:42:04] 2021-07-15 02:41:36,653 | DEBUG | pilot.control.data | copytool_in | will not set job_aborted yet [2021-07-14 22:42:04] 2021-07-15 02:41:36,653 | DEBUG | pilot.control.data | copytool_in | [data] copytool_in thread has finished [2021-07-14 22:42:04] 2021-07-15 02:41:36,684 | DEBUG | pilot.control.job | validate | will not set job_aborted yet [2021-07-14 22:42:04] 2021-07-15 02:41:36,685 | DEBUG | pilot.control.job | validate | [job] validate thread has finished [2021-07-14 22:42:04] 2021-07-15 02:41:36,797 | DEBUG | pilot.control.data | control | data control ending since graceful_stop has been set [2021-07-14 22:42:04] 2021-07-15 02:41:36,797 | DEBUG | pilot.control.data | control | will not set job_aborted yet [2021-07-14 22:42:04] 2021-07-15 02:41:36,797 | DEBUG | pilot.control.data | control | [data] control thread has finished [2021-07-14 22:42:04] 2021-07-15 02:41:36,960 | DEBUG | pilot.control.job | create_data_payload | will not set job_aborted yet [2021-07-14 22:42:04] 2021-07-15 02:41:36,961 | DEBUG | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished [2021-07-14 22:42:04] 2021-07-15 02:41:36,993 | DEBUG | pilot.control.payload | control | payload control ending since graceful_stop has been set [2021-07-14 22:42:04] 2021-07-15 02:41:36,993 | DEBUG | pilot.control.payload | control | will not set job_aborted yet [2021-07-14 22:42:04] 2021-07-15 02:41:36,993 | DEBUG | pilot.control.payload | control | [payload] control thread has finished [2021-07-14 22:42:04] 2021-07-15 02:41:37,172 | DEBUG | pilot.control.payload | execute_payloads | will not set job_aborted yet [2021-07-14 22:42:04] 2021-07-15 02:41:37,173 | INFO | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished [2021-07-14 22:42:04] 2021-07-15 02:41:37,294 | DEBUG | pilot.control.payload | validate_pre | will not set job_aborted yet [2021-07-14 22:42:04] 2021-07-15 02:41:37,294 | INFO | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished [2021-07-14 22:42:04] 2021-07-15 02:41:37,488 | DEBUG | pilot.control.job | control | job control ending since graceful_stop has been set [2021-07-14 22:42:04] 2021-07-15 02:41:37,488 | DEBUG | pilot.control.job | control | will not set job_aborted yet [2021-07-14 22:42:04] 2021-07-15 02:41:37,489 | DEBUG | pilot.control.job | control | [job] control thread has finished [2021-07-14 22:42:04] 2021-07-15 02:41:37,543 | DEBUG | pilot.control.data | copytool_out | will not set job_aborted yet [2021-07-14 22:42:04] 2021-07-15 02:41:37,543 | DEBUG | pilot.control.data | copytool_out | [data] copytool_out thread has finished [2021-07-14 22:42:04] 2021-07-15 02:41:37,743 | DEBUG | pilot.control.payload | validate_post | will not set job_aborted yet [2021-07-14 22:42:04] 2021-07-15 02:41:37,743 | INFO | pilot.control.payload | validate_post | [payload] validate_post thread has finished [2021-07-14 22:42:04] 2021-07-15 02:41:38,060 | DEBUG | pilot.control.payload | failed_post | will not set job_aborted yet [2021-07-14 22:42:04] 2021-07-15 02:41:38,061 | INFO | pilot.control.payload | failed_post | [payload] failed_post thread has finished [2021-07-14 22:42:04] 2021-07-15 02:41:38,244 | WARNING | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration [2021-07-14 22:42:04] 2021-07-15 02:41:38,245 | DEBUG | pilot.control.job | queue_monitor | will not set job_aborted yet [2021-07-14 22:42:04] 2021-07-15 02:41:38,245 | DEBUG | pilot.control.job | queue_monitor | [job] queue monitor thread has finished [2021-07-14 22:42:04] 2021-07-15 02:41:38,928 | WARNING | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration [2021-07-14 22:42:04] 2021-07-15 02:41:41,931 | DEBUG | pilot.control.data | queue_monitoring | will not set job_aborted yet [2021-07-14 22:42:04] 2021-07-15 02:41:41,934 | DEBUG | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished [2021-07-14 22:42:04] 2021-07-15 02:42:03,360 | WARNING | pilot.control.job | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 76 s) [2021-07-14 22:42:04] 2021-07-15 02:42:03,361 | DEBUG | pilot.util.processes | threads_aborted | aborting since the last relevant thread is about to finish [2021-07-14 22:42:04] 2021-07-15 02:42:03,361 | DEBUG | pilot.control.job | job_monitor | will proceed to set job_aborted [2021-07-14 22:42:04] 2021-07-15 02:42:03,361 | DEBUG | pilot.control.job | job_monitor | [job] job monitor thread has finished [2021-07-14 22:42:04] 2021-07-15 02:42:03,604 | INFO | pilot.workflow.generic | run | end of generic workflow (traces error code: 0) [2021-07-14 22:42:04] 2021-07-15 02:42:03,605 | INFO | root | wrap_up | traces error code: 0 [2021-07-14 22:42:04] 2021-07-15 02:42:03,605 | INFO | root | wrap_up | pilot has finished [2021-07-14 22:42:04] 2021-07-15 02:42:03,690 [wrapper] ==== pilot stdout END ==== [2021-07-14 22:42:04] 2021-07-15 02:42:03,699 [wrapper] ==== wrapper stdout RESUME ==== [2021-07-14 22:42:04] 2021-07-15 02:42:03,709 [wrapper] Pilot exit status: 0 [2021-07-14 22:42:04] 2021-07-15 02:42:03,836 [wrapper] pandaids: 5120403588 [2021-07-14 22:42:04] 2021-07-15 02:42:03,901 [wrapper] apfmon messages muted [2021-07-14 22:42:04] 2021-07-15 02:42:03,931 [wrapper] Test setup, not cleaning [2021-07-14 22:42:04] 2021-07-15 02:42:03,951 [wrapper] ==== wrapper stdout END ==== [2021-07-14 22:42:04] 2021-07-15 02:42:03,972 [wrapper] ==== wrapper stderr END ==== [2021-07-14 22:42:04] 2021-07-15 02:42:03,998 [wrapper] wrapperexiting ec=0, duration=6047 [2021-07-14 22:42:04] 2021-07-15 02:42:04,012 [wrapper] apfmon messages muted [2021-07-14 22:42:04] *** Error codes and diagnostics *** [2021-07-14 22:42:04] "exeErrorCode": 0, [2021-07-14 22:42:04] "exeErrorDiag": "", [2021-07-14 22:42:04] "pilotErrorCode": 0, [2021-07-14 22:42:04] "pilotErrorDiag": "", [2021-07-14 22:42:04] *** Listing of results directory *** [2021-07-14 22:42:04] total 51644 [2021-07-14 22:42:04] -rw-r--r-- 1 boinc boinc 334707 Jul 14 20:22 pilot2.tar.gz [2021-07-14 22:42:04] -rwx------ 1 boinc boinc 20591 Jul 14 20:53 runpilot2-wrapper.sh [2021-07-14 22:42:04] -rw-r--r-- 1 boinc boinc 4534 Jul 14 20:53 queuedata.json [2021-07-14 22:42:04] -rw-r--r-- 1 boinc boinc 107 Jul 14 21:01 wrapper_26015_x86_64-pc-linux-gnu [2021-07-14 22:42:04] -rwxr-xr-x 1 boinc boinc 6966 Jul 14 21:01 run_atlas [2021-07-14 22:42:04] -rw-r--r-- 1 boinc boinc 112 Jul 14 21:01 job.xml [2021-07-14 22:42:04] drwxrwx--x 2 boinc boinc 4096 Jul 14 21:01 shared [2021-07-14 22:42:04] -rw-r--r-- 1 boinc boinc 6188 Jul 14 21:01 init_data.xml [2021-07-14 22:42:04] -rw-r--r-- 1 boinc boinc 0 Jul 14 21:01 boinc_lockfile [2021-07-14 22:42:04] -rw-r--r-- 1 boinc boinc 16551 Jul 14 21:01 start_atlas.sh [2021-07-14 22:42:04] -rw-r--r-- 1 boinc boinc 344148 Jul 14 21:01 input.tar.gz [2021-07-14 22:42:04] -rw-r--r-- 1 boinc boinc 37438704 Jul 14 21:01 EVNT.04972714._000033.pool.root.1 [2021-07-14 22:42:04] -rw-r--r-- 1 boinc boinc 2650 Jul 14 21:01 pandaJob.out [2021-07-14 22:42:04] -rw------- 1 boinc boinc 1067131 Jul 14 21:02 agis_schedconf.cvmfs.json [2021-07-14 22:42:04] -rw------- 1 boinc boinc 1963505 Jul 14 21:02 cric_ddmendpoints.json [2021-07-14 22:42:04] drwx------ 4 boinc boinc 4096 Jul 14 21:02 pilot2 [2021-07-14 22:42:04] -rw------- 1 boinc boinc 5136212 Jul 14 22:39 output.1.eb048e45-e1e6-4483-a305-efefb9976723_40415.pool.root [2021-07-14 22:42:04] -rw-r--r-- 1 boinc boinc 534 Jul 14 22:40 boinc_task_state.xml [2021-07-14 22:42:04] -rw------- 1 boinc boinc 1014 Jul 14 22:41 memory_monitor_summary.json [2021-07-14 22:42:04] -rw------- 1 boinc boinc 193644 Jul 14 22:41 eb048e45-e1e6-4483-a305-efefb9976723_40415.1.job.log.tgz [2021-07-14 22:42:04] -rw------- 1 boinc boinc 7810 Jul 14 22:41 heartbeat.json [2021-07-14 22:42:04] -rw-r--r-- 1 boinc boinc 8192 Jul 14 22:41 boinc_mmap_file [2021-07-14 22:42:04] -rw-r--r-- 1 boinc boinc 26 Jul 14 22:41 wrapper_checkpoint.txt [2021-07-14 22:42:04] -rw------- 1 boinc boinc 7518 Jul 14 22:42 pilotlog.txt [2021-07-14 22:42:04] -rw------- 1 boinc boinc 428069 Jul 14 22:42 eb048e45-e1e6-4483-a305-efefb9976723_40415.1.job.log [2021-07-14 22:42:04] -rw------- 1 boinc boinc 536 Jul 14 22:42 output.list [2021-07-14 22:42:04] -rw-r--r-- 1 boinc boinc 748 Jul 14 22:42 runtime_log [2021-07-14 22:42:04] -rw------- 1 boinc boinc 5775360 Jul 14 22:42 result.tar.gz [2021-07-14 22:42:04] -rw-r--r-- 1 boinc boinc 9429 Jul 14 22:42 runtime_log.err [2021-07-14 22:42:04] -rw------- 1 boinc boinc 565 Jul 14 22:42 HsxNDm8n4Nzn7Olcko1bjSoqABFKDmABFKDmumdXDmnzFKDmwVc8Wo.diag [2021-07-14 22:42:04] -rw-r--r-- 1 boinc boinc 29841 Jul 14 22:42 stderr.txt [2021-07-14 22:42:04] HITS file was successfully produced: [2021-07-14 22:42:04] -rw------- 1 boinc boinc 5136212 Jul 14 22:39 shared/HITS.pool.root.1 [2021-07-14 22:42:04] *** Contents of shared directory: *** [2021-07-14 22:42:04] total 47580 [2021-07-14 22:42:04] -rw-r--r-- 1 boinc boinc 37438704 Jul 14 21:01 ATLAS.root_0 [2021-07-14 22:42:04] -rw-r--r-- 1 boinc boinc 16551 Jul 14 21:01 start_atlas.sh [2021-07-14 22:42:04] -rw-r--r-- 1 boinc boinc 344148 Jul 14 21:01 input.tar.gz [2021-07-14 22:42:04] -rw------- 1 boinc boinc 5136212 Jul 14 22:39 HITS.pool.root.1 [2021-07-14 22:42:04] -rw------- 1 boinc boinc 5775360 Jul 14 22:42 result.tar.gz 22:42:06 (138924): run_atlas exited; CPU time 3017.269178 22:42:06 (138924): called boinc_finish(0) </stderr_txt> ]]>
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