Name | ikINDmXGNOzn7Olcko1bjSoqABFKDmABFKDmumdXDmp1FKDmQf7frm_0 |
Workunit | 2104821 |
Created | 15 Jul 2021, 20:36:04 UTC |
Sent | 15 Jul 2021, 20:41:40 UTC |
Report deadline | 22 Jul 2021, 20:41:40 UTC |
Received | 15 Jul 2021, 22:12:07 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 4357 |
Run time | 1 hours 28 min 40 sec |
CPU time | 39 min 50 sec |
Validate state | Valid |
Credit | 19.62 |
Device peak FLOPS | 3.04 GFLOPS |
Application version | ATLAS Simulation v1.04 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.65 GB |
Peak swap size | 34.88 GB |
Peak disk usage | 78.66 MB |
<core_client_version>7.9.3</core_client_version> <![CDATA[ <stderr_txt> 16:42:04 (63016): wrapper (7.7.26015): starting 16:42:04 (63016): wrapper: running run_atlas (--nthreads 1) [2021-07-15 16:42:04] Arguments: --nthreads 1 [2021-07-15 16:42:04] Threads: 1 [2021-07-15 16:42:04] Checking for CVMFS [2021-07-15 16:42:06] Probing /cvmfs/atlas.cern.ch... OK [2021-07-15 16:42:08] Probing /cvmfs/atlas-condb.cern.ch... OK [2021-07-15 16:42:08] Running cvmfs_config stat atlas.cern.ch [2021-07-15 16:42:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2021-07-15 16:42:08] 2.9.0.0 63287 0 24720 88438 3 1 3691816 4194305 0 130560 0 0 100.000 0 0 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 0 [2021-07-15 16:42:08] CVMFS is ok [2021-07-15 16:42:08] Efficiency of ATLAS tasks can be improved by the following measure(s): [2021-07-15 16:42:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io. [2021-07-15 16:42:08] Small home clusters do not require a local http proxy but it is suggested if [2021-07-15 16:42:08] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks. [2021-07-15 16:42:08] Further information can be found at the LHC@home message board. [2021-07-15 16:42:08] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2021-07-15 16:42:08] Checking for singularity binary... [2021-07-15 16:42:08] Using singularity found in PATH at /usr/local/bin/singularity [2021-07-15 16:42:08] Running /usr/local/bin/singularity --version [2021-07-15 16:42:09] singularity version 3.7.2+10-ga969f0f8c [2021-07-15 16:42:09] Checking singularity works with /usr/local/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2021-07-15 16:42:10] E5-2670 [2021-07-15 16:42:10] Singularity works [2021-07-15 16:42:11] Starting ATLAS job with PandaID=5121292204 [2021-07-15 16:42:11] Running command: /usr/local/bin/singularity exec --pwd /var/lib/boinc-client/slots/36 -B /cvmfs,/var /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2021-07-15 18:10:40] *** The last 200 lines of the pilot log: *** [2021-07-15 18:10:40] "model_name": "Intel(R) Xeon(R) CPU E5-2670 0 @ 2.60GHz", [2021-07-15 18:10:40] "node": "E5-2670", [2021-07-15 18:10:40] "platform": "Linux-4.15.0-142-generic-x86_64-with-centos-7.8.2003-Core" [2021-07-15 18:10:40] }, [2021-07-15 18:10:40] "transform": { [2021-07-15 18:10:40] "cpuTime": 8, [2021-07-15 18:10:40] "externalCpuTime": 166, [2021-07-15 18:10:40] "wallTime": 4992 [2021-07-15 18:10:40] } [2021-07-15 18:10:40] } [2021-07-15 18:10:40] } [2021-07-15 18:10:40] 2021-07-15 22:09:44,752 | DEBUG | pilot.user.atlas.common | update_server | no need to update logstash for this job [2021-07-15 18:10:40] 2021-07-15 22:09:44,752 | INFO | pilot.control.job | send_state | pilot will not update the server (heartbeat message will be written to file) [2021-07-15 18:10:40] 2021-07-15 22:09:44,752 | INFO | pilot.control.job | send_state | job 5121292204 has finished - writing final server update [2021-07-15 18:10:40] 2021-07-15 22:09:44,753 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics_string | job definition core count: 1 [2021-07-15 18:10:40] 2021-07-15 22:09:44,753 | INFO | pilot.user.atlas.jobmetrics | get_job_metrics_string | will not add max space = -35665500 B to job metrics [2021-07-15 18:10:40] 2021-07-15 22:09:44,755 | DEBUG | pilot.api.analytics | get_fitted_data | removing tails from data to be fitted [2021-07-15 18:10:40] 2021-07-15 22:09:44,756 | INFO | pilot.api.analytics | get_fitted_data | fitting pss+swap vs Time [2021-07-15 18:10:40] 2021-07-15 22:09:44,756 | INFO | pilot.api.analytics | get_fitted_data | current memory leak: 236.11 B/s (using 76 data points, chi2=2928379) [2021-07-15 18:10:40] 2021-07-15 22:09:44,757 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics | job metrics="actualCoreCount=4 nEvents=2 dbTime=293.7 dbData=4211388 leak=236.11 chi2=2928379 eventn [2021-07-15 18:10:40] 2021-07-15 22:09:44,757 | INFO | pilot.control.job | get_data_structure | mean actualcorecount: 6.985294 [2021-07-15 18:10:40] 2021-07-15 22:09:44,757 | INFO | pilot.control.job | get_data_structure | total number of processed events: 2 (read) [2021-07-15 18:10:40] 2021-07-15 22:09:44,782 | INFO | pilot.util.container | execute | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2021-07-15 18:10:40] 2021-07-15 22:09:44,859 | INFO | pilot.user.atlas.utilities | get_memory_values | using path: /var/lib/boinc-client/slots/36/PanDA_Pilot-5121292204/memory_monitor_summary.json (trf n [2021-07-15 18:10:40] 2021-07-15 22:09:44,861 | DEBUG | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'Avg': {'nprocs': 4.939, 'nthreads': 5.891, 'pss': 1356616.0, 'rchar': 97807.0, [2021-07-15 18:10:40] 2021-07-15 22:09:44,862 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard info from prmon json [2021-07-15 18:10:40] 2021-07-15 22:09:44,862 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard memory fields from prmon json [2021-07-15 18:10:40] 2021-07-15 22:09:44,862 | INFO | pilot.util.timing | timing_report | .............................. [2021-07-15 18:10:40] 2021-07-15 22:09:44,862 | INFO | pilot.util.timing | timing_report | . Timing measurements: [2021-07-15 18:10:40] 2021-07-15 22:09:44,862 | INFO | pilot.util.timing | timing_report | . get job = 1 s [2021-07-15 18:10:40] 2021-07-15 22:09:44,862 | INFO | pilot.util.timing | timing_report | . initial setup = 3 s [2021-07-15 18:10:40] 2021-07-15 22:09:44,863 | INFO | pilot.util.timing | timing_report | . payload setup = 66 s [2021-07-15 18:10:40] 2021-07-15 22:09:44,863 | INFO | pilot.util.timing | timing_report | . total setup = 69 s [2021-07-15 18:10:40] 2021-07-15 22:09:44,863 | INFO | pilot.util.timing | timing_report | . stage-in = 0 s [2021-07-15 18:10:40] 2021-07-15 22:09:44,863 | INFO | pilot.util.timing | timing_report | . payload execution = 5070 s [2021-07-15 18:10:40] 2021-07-15 22:09:44,863 | INFO | pilot.util.timing | timing_report | . stage-out = 1 s [2021-07-15 18:10:40] 2021-07-15 22:09:44,863 | INFO | pilot.util.timing | timing_report | .............................. [2021-07-15 18:10:40] 2021-07-15 22:09:44,863 | DEBUG | pilot.control.job | send_state | is_harvester_mode(args) : False [2021-07-15 18:10:40] 2021-07-15 22:09:44,865 | DEBUG | pilot.control.job | write_heartbeat_to_file | heartbeat dictionary: {'jobId': '5121292204', 'state': 'finished', 'timestamp': '2021-07-15T18:09:44 [2021-07-15 18:10:40] 2021-07-15 22:09:44,865 | DEBUG | pilot.control.job | write_heartbeat_to_file | wrote heartbeat to file /var/lib/boinc-client/slots/36/heartbeat.json [2021-07-15 18:10:40] 2021-07-15 22:09:44,866 | DEBUG | pilot.control.job | queue_monitor | job 5121292204 was dequeued from the monitored payloads queue [2021-07-15 18:10:40] 2021-07-15 22:09:45,047 | DEBUG | pilot.control.job | queue_monitor | tmp job object deleted [2021-07-15 18:10:40] 2021-07-15 22:09:45,541 | INFO | pilot.control.job | make_job_report | [2021-07-15 18:10:40] 2021-07-15 22:09:45,542 | INFO | pilot.control.job | make_job_report | job summary report [2021-07-15 18:10:40] 2021-07-15 22:09:45,542 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2021-07-15 18:10:40] 2021-07-15 22:09:45,542 | INFO | pilot.control.job | make_job_report | PanDA job id: 5121292204 [2021-07-15 18:10:40] 2021-07-15 22:09:45,542 | INFO | pilot.control.job | make_job_report | task id: NULL [2021-07-15 18:10:40] 2021-07-15 22:09:45,542 | INFO | pilot.control.job | make_job_report | errors: (none) [2021-07-15 18:10:40] 2021-07-15 22:09:45,542 | INFO | pilot.control.job | make_job_report | status: LOG_TRANSFER = DONE [2021-07-15 18:10:40] 2021-07-15 22:09:45,543 | INFO | pilot.control.job | make_job_report | pilot state: finished [2021-07-15 18:10:40] 2021-07-15 22:09:45,543 | INFO | pilot.control.job | make_job_report | transexitcode: 0 [2021-07-15 18:10:40] 2021-07-15 22:09:45,543 | INFO | pilot.control.job | make_job_report | exeerrorcode: 0 [2021-07-15 18:10:40] 2021-07-15 22:09:45,543 | INFO | pilot.control.job | make_job_report | exeerrordiag: [2021-07-15 18:10:40] 2021-07-15 22:09:45,543 | INFO | pilot.control.job | make_job_report | exitcode: 0 [2021-07-15 18:10:40] 2021-07-15 22:09:45,543 | INFO | pilot.control.job | make_job_report | exitmsg: OK [2021-07-15 18:10:40] 2021-07-15 22:09:45,544 | INFO | pilot.control.job | make_job_report | cpuconsumptiontime: 2657 s [2021-07-15 18:10:40] 2021-07-15 22:09:45,544 | INFO | pilot.control.job | make_job_report | nevents: 2 [2021-07-15 18:10:40] 2021-07-15 22:09:45,544 | INFO | pilot.control.job | make_job_report | neventsw: 0 [2021-07-15 18:10:40] 2021-07-15 22:09:45,544 | INFO | pilot.control.job | make_job_report | pid: 82664 [2021-07-15 18:10:40] 2021-07-15 22:09:45,544 | INFO | pilot.control.job | make_job_report | pgrp: 82664 [2021-07-15 18:10:40] 2021-07-15 22:09:45,544 | INFO | pilot.control.job | make_job_report | corecount: 1 [2021-07-15 18:10:40] 2021-07-15 22:09:45,544 | INFO | pilot.control.job | make_job_report | event service: False [2021-07-15 18:10:40] 2021-07-15 22:09:45,545 | INFO | pilot.control.job | make_job_report | sizes: {24114916: 3864854, 24114918: 3866131, 24114919: 3866410, 24114920: 3866352, 24114930: 386635 [2021-07-15 18:10:40] 2021-07-15 22:09:45,545 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2021-07-15 18:10:40] 2021-07-15 22:09:45,545 | INFO | pilot.control.job | make_job_report | [2021-07-15 18:10:40] 2021-07-15 22:09:45,545 | DEBUG | pilot.control.job | has_job_completed | ls -lF /var/lib/boinc-client/slots/36: [2021-07-15 18:10:40] [2021-07-15 18:10:40] 2021-07-15 22:09:45,545 | INFO | pilot.util.container | execute | executing command: ls -lF /var/lib/boinc-client/slots/36 [2021-07-15 18:10:40] 2021-07-15 22:09:45,585 | DEBUG | pilot.control.job | has_job_completed | total 41912 [2021-07-15 18:10:40] -rw------- 1 boinc boinc 366924 Jul 15 18:09 93098ec5-f104-499d-add1-fe5bd32a6129_81859.1.job.log [2021-07-15 18:10:40] -rw------- 1 boinc boinc 203421 Jul 15 18:09 93098ec5-f104-499d-add1-fe5bd32a6129_81859.1.job.log.tgz [2021-07-15 18:10:40] -rw------- 1 boinc boinc 1068213 Jul 15 16:43 agis_schedconf.cvmfs.json [2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc 0 Jul 15 16:42 boinc_lockfile [2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc 8192 Jul 15 18:09 boinc_mmap_file [2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc 535 Jul 15 18:07 boinc_task_state.xml [2021-07-15 18:10:40] -rw------- 1 boinc boinc 1967101 Jul 15 16:43 cric_ddmendpoints.json [2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc 36949600 Jul 15 16:42 EVNT.04972714._000039.pool.root.1 [2021-07-15 18:10:40] -rw------- 1 boinc boinc 7823 Jul 15 18:09 heartbeat.json [2021-07-15 18:10:40] -rw------- 1 boinc boinc 130 Jul 15 16:42 ikINDmXGNOzn7Olcko1bjSoqABFKDmABFKDmumdXDmp1FKDmQf7frm.diag [2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc 6188 Jul 15 16:42 init_data.xml [2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc 344111 Jul 15 16:42 input.tar.gz [2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc 112 Jul 15 16:42 job.xml [2021-07-15 18:10:40] -rw------- 1 boinc boinc 1015 Jul 15 18:09 memory_monitor_summary.json [2021-07-15 18:10:40] -rw------- 1 boinc boinc 1169404 Jul 15 18:06 output.1.93098ec5-f104-499d-add1-fe5bd32a6129_81859.pool.root [2021-07-15 18:10:40] -rw------- 1 boinc boinc 536 Jul 15 18:09 output.list [2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc 2579 Jul 15 16:42 pandaJob.out [2021-07-15 18:10:40] drwxrwx--- 2 boinc boinc 4096 Jul 15 18:09 PanDA_Pilot-5121292204/ [2021-07-15 18:10:40] drwx------ 4 boinc boinc 4096 Jul 15 16:43 pilot2/ [2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc 334707 Jul 15 16:35 pilot2.tar.gz [2021-07-15 18:10:40] -rw------- 1 boinc boinc 347954 Jul 15 18:09 pilotlog.txt [2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc 3214 Jul 15 16:35 queuedata.json [2021-07-15 18:10:40] -rwxr-xr-x 1 boinc boinc 6966 Jul 15 16:42 run_atlas* [2021-07-15 18:10:40] -rwx------ 1 boinc boinc 20591 Jul 15 16:35 runpilot2-wrapper.sh* [2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc 407 Jul 15 16:42 runtime_log [2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc 5574 Jul 15 16:42 runtime_log.err [2021-07-15 18:10:40] drwxrwx--x 2 boinc boinc 4096 Jul 15 16:42 shared/ [2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc 16551 Jul 15 16:42 start_atlas.sh [2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc 2193 Jul 15 16:42 stderr.txt [2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc 107 Jul 15 16:42 wrapper_26015_x86_64-pc-linux-gnu [2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc 26 Jul 15 18:09 wrapper_checkpoint.txt [2021-07-15 18:10:40] 2021-07-15 22:09:45,586 | INFO | pilot.util.queuehandling | queue_report | queue jobs has 0 job(s) [2021-07-15 18:10:40] 2021-07-15 22:09:45,586 | INFO | pilot.util.queuehandling | queue_report | queue payloads has 0 job(s) [2021-07-15 18:10:40] 2021-07-15 22:09:45,586 | INFO | pilot.util.queuehandling | queue_report | queue data_in has 0 job(s) [2021-07-15 18:10:40] 2021-07-15 22:09:45,586 | INFO | pilot.util.queuehandling | queue_report | queue data_out has 0 job(s) [2021-07-15 18:10:40] 2021-07-15 22:09:45,587 | INFO | pilot.util.queuehandling | queue_report | queue current_data_in has 0 job(s) [2021-07-15 18:10:40] 2021-07-15 22:09:45,587 | INFO | pilot.util.queuehandling | queue_report | queue validated_jobs has 0 job(s) [2021-07-15 18:10:40] 2021-07-15 22:09:45,587 | INFO | pilot.util.queuehandling | queue_report | queue validated_payloads has 0 job(s) [2021-07-15 18:10:40] 2021-07-15 22:09:45,587 | INFO | pilot.util.queuehandling | queue_report | queue monitored_payloads has 0 job(s) [2021-07-15 18:10:40] 2021-07-15 22:09:45,587 | INFO | pilot.util.queuehandling | queue_report | queue finished_jobs has 0 job(s) [2021-07-15 18:10:40] 2021-07-15 22:09:45,587 | INFO | pilot.util.queuehandling | queue_report | queue finished_payloads has 0 job(s) [2021-07-15 18:10:40] 2021-07-15 22:09:45,587 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_in has 1 job(s) [2021-07-15 18:10:40] 2021-07-15 22:09:45,588 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_out has 0 job(s) [2021-07-15 18:10:40] 2021-07-15 22:09:45,588 | INFO | pilot.util.queuehandling | queue_report | queue failed_jobs has 0 job(s) [2021-07-15 18:10:40] 2021-07-15 22:09:45,588 | INFO | pilot.util.queuehandling | queue_report | queue failed_payloads has 0 job(s) [2021-07-15 18:10:40] 2021-07-15 22:09:45,588 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_in has 0 job(s) [2021-07-15 18:10:40] 2021-07-15 22:09:45,588 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_out has 0 job(s) [2021-07-15 18:10:40] 2021-07-15 22:09:45,588 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobs has 0 job(s) [2021-07-15 18:10:40] 2021-07-15 22:09:45,588 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s) [2021-07-15 18:10:40] 2021-07-15 22:09:45,589 | INFO | pilot.control.job | has_job_completed | job 5121292204 has completed (purged errors) [2021-07-15 18:10:40] 2021-07-15 22:09:45,589 | INFO | pilot.util.processes | cleanup | overall cleanup function is called [2021-07-15 18:10:40] 2021-07-15 22:09:45,593 | DEBUG | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc-client/slots/36/PanDA_Pilot-5121292204 [2021-07-15 18:10:40] 2021-07-15 22:09:46,596 | INFO | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [82664] [2021-07-15 18:10:40] 2021-07-15 22:09:46,597 | INFO | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 82664 [2021-07-15 18:10:40] 2021-07-15 22:09:46,597 | INFO | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes [2021-07-15 18:10:40] 2021-07-15 22:09:47,600 | INFO | pilot.util.processes | cleanup | collected zombie processes [2021-07-15 18:10:40] 2021-07-15 22:09:47,601 | INFO | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=82664 [2021-07-15 18:10:40] 2021-07-15 22:09:47,722 | INFO | pilot.util.processes | kill_processes | process IDs to be killed: [82664] (in reverse order) [2021-07-15 18:10:40] 2021-07-15 22:09:47,832 | WARNING | pilot.util.processes | kill_processes | found no corresponding commands to process id(s) [2021-07-15 18:10:40] 2021-07-15 22:09:47,833 | INFO | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs [2021-07-15 18:10:40] 2021-07-15 22:09:47,833 | DEBUG | pilot.util.queuehandling | purge_queue | queue purged [2021-07-15 18:10:40] 2021-07-15 22:09:47,834 | INFO | pilot.control.job | retrieve | ready for new job [2021-07-15 18:10:40] 2021-07-15 22:09:47,834 | INFO | root | retrieve | pilot has finished for previous job - re-establishing logging [2021-07-15 18:10:40] 2021-07-15 22:09:47,835 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2021-07-15 18:10:40] 2021-07-15 22:09:47,836 | INFO | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 2.12.2 (1) *** [2021-07-15 18:10:40] 2021-07-15 22:09:47,836 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2021-07-15 18:10:40] 2021-07-15 22:09:47,836 | INFO | pilot.util.auxiliary | pilot_version_banner | [2021-07-15 18:10:40] 2021-07-15 22:09:47,858 | INFO | pilot.util.auxiliary | display_architecture_info | architecture information: [2021-07-15 18:10:40] 2021-07-15 22:09:48,132 | INFO | pilot.util.auxiliary | display_architecture_info | [2021-07-15 18:10:40] LSB Version: :core-4.1-amd64:core-4.1-noarch [2021-07-15 18:10:40] Distributor ID: CentOS [2021-07-15 18:10:40] Description: CentOS Linux release 7.8.2003 (Core) [2021-07-15 18:10:40] Release: 7.8.2003 [2021-07-15 18:10:40] Codename: Core [2021-07-15 18:10:40] 2021-07-15 22:09:48,133 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2021-07-15 18:10:40] 2021-07-15 22:09:48,636 | DEBUG | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc-client/slots/36 [2021-07-15 18:10:40] 2021-07-15 22:09:48,920 | INFO | pilot.util.monitoring | check_local_space | sufficient remaining disk space (52969865216 B) [2021-07-15 18:10:40] 2021-07-15 22:09:48,922 | WARNING | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job [2021-07-15 18:10:40] 2021-07-15 22:09:48,924 | DEBUG | pilot.control.job | retrieve | will not set job_aborted yet [2021-07-15 18:10:40] 2021-07-15 22:09:48,924 | WARNING | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration [2021-07-15 18:10:40] 2021-07-15 22:09:48,925 | WARNING | pilot.control.monitor | control | aborting monitor loop since graceful_stop has been set [2021-07-15 18:10:40] 2021-07-15 22:09:48,925 | DEBUG | pilot.control.job | retrieve | [job] retrieve thread has finished [2021-07-15 18:10:40] 2021-07-15 22:09:48,926 | INFO | pilot.control.monitor | control | [monitor] control thread has ended [2021-07-15 18:10:40] 2021-07-15 22:09:49,033 | DEBUG | pilot.control.job | create_data_payload | will not set job_aborted yet [2021-07-15 18:10:40] 2021-07-15 22:09:49,034 | DEBUG | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished [2021-07-15 18:10:40] 2021-07-15 22:09:49,417 | DEBUG | pilot.control.payload | control | payload control ending since graceful_stop has been set [2021-07-15 18:10:40] 2021-07-15 22:09:49,419 | DEBUG | pilot.control.payload | control | will not set job_aborted yet [2021-07-15 18:10:40] 2021-07-15 22:09:49,419 | DEBUG | pilot.control.payload | control | [payload] control thread has finished [2021-07-15 18:10:40] 2021-07-15 22:09:49,535 | DEBUG | pilot.control.job | validate | will not set job_aborted yet [2021-07-15 18:10:40] 2021-07-15 22:09:49,538 | DEBUG | pilot.control.job | validate | [job] validate thread has finished [2021-07-15 18:10:40] 2021-07-15 22:09:49,549 | DEBUG | pilot.control.payload | execute_payloads | will not set job_aborted yet [2021-07-15 18:10:40] 2021-07-15 22:09:49,551 | INFO | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished [2021-07-15 18:10:40] 2021-07-15 22:09:49,654 | DEBUG | pilot.control.payload | validate_post | will not set job_aborted yet [2021-07-15 18:10:40] 2021-07-15 22:09:49,656 | INFO | pilot.control.payload | validate_post | [payload] validate_post thread has finished [2021-07-15 18:10:40] 2021-07-15 22:09:49,689 | DEBUG | pilot.control.data | control | data control ending since graceful_stop has been set [2021-07-15 18:10:40] 2021-07-15 22:09:49,690 | DEBUG | pilot.control.data | control | will not set job_aborted yet [2021-07-15 18:10:40] 2021-07-15 22:09:49,691 | DEBUG | pilot.control.data | control | [data] control thread has finished [2021-07-15 18:10:40] 2021-07-15 22:09:49,874 | DEBUG | pilot.control.payload | validate_pre | will not set job_aborted yet [2021-07-15 18:10:40] 2021-07-15 22:09:49,876 | INFO | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished [2021-07-15 18:10:40] 2021-07-15 22:09:49,928 | DEBUG | pilot.control.data | copytool_out | will not set job_aborted yet [2021-07-15 18:10:40] 2021-07-15 22:09:49,931 | DEBUG | pilot.control.data | copytool_out | [data] copytool_out thread has finished [2021-07-15 18:10:40] 2021-07-15 22:09:50,038 | DEBUG | pilot.control.data | copytool_in | will not set job_aborted yet [2021-07-15 18:10:40] 2021-07-15 22:09:50,042 | DEBUG | pilot.control.data | copytool_in | [data] copytool_in thread has finished [2021-07-15 18:10:40] 2021-07-15 22:09:50,057 | WARNING | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration [2021-07-15 18:10:40] 2021-07-15 22:09:50,059 | DEBUG | pilot.control.job | queue_monitor | will not set job_aborted yet [2021-07-15 18:10:40] 2021-07-15 22:09:50,060 | DEBUG | pilot.control.job | queue_monitor | [job] queue monitor thread has finished [2021-07-15 18:10:40] 2021-07-15 22:09:50,105 | DEBUG | pilot.control.job | control | job control ending since graceful_stop has been set [2021-07-15 18:10:40] 2021-07-15 22:09:50,108 | DEBUG | pilot.control.job | control | will not set job_aborted yet [2021-07-15 18:10:40] 2021-07-15 22:09:50,108 | DEBUG | pilot.control.job | control | [job] control thread has finished [2021-07-15 18:10:40] 2021-07-15 22:09:50,151 | DEBUG | pilot.control.payload | failed_post | will not set job_aborted yet [2021-07-15 18:10:40] 2021-07-15 22:09:50,153 | INFO | pilot.control.payload | failed_post | [payload] failed_post thread has finished [2021-07-15 18:10:40] 2021-07-15 22:09:50,762 | WARNING | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration [2021-07-15 18:10:40] 2021-07-15 22:09:53,771 | DEBUG | pilot.control.data | queue_monitoring | will not set job_aborted yet [2021-07-15 18:10:40] 2021-07-15 22:09:53,773 | DEBUG | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished [2021-07-15 18:10:40] 2021-07-15 22:10:39,137 | WARNING | pilot.control.job | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 75 s) [2021-07-15 18:10:40] 2021-07-15 22:10:39,138 | DEBUG | pilot.util.processes | threads_aborted | aborting since the last relevant thread is about to finish [2021-07-15 18:10:40] 2021-07-15 22:10:39,139 | DEBUG | pilot.control.job | job_monitor | will proceed to set job_aborted [2021-07-15 18:10:40] 2021-07-15 22:10:39,139 | DEBUG | pilot.control.job | job_monitor | [job] job monitor thread has finished [2021-07-15 18:10:40] 2021-07-15 22:10:39,524 | INFO | pilot.workflow.generic | run | end of generic workflow (traces error code: 0) [2021-07-15 18:10:40] 2021-07-15 22:10:39,526 | INFO | root | wrap_up | traces error code: 0 [2021-07-15 18:10:40] 2021-07-15 22:10:39,526 | INFO | root | wrap_up | pilot has finished [2021-07-15 18:10:40] 2021-07-15 22:10:39,683 [wrapper] ==== pilot stdout END ==== [2021-07-15 18:10:40] 2021-07-15 22:10:39,691 [wrapper] ==== wrapper stdout RESUME ==== [2021-07-15 18:10:40] 2021-07-15 22:10:39,702 [wrapper] Pilot exit status: 0 [2021-07-15 18:10:40] 2021-07-15 22:10:39,734 [wrapper] pandaids: 5121292204 [2021-07-15 18:10:40] 2021-07-15 22:10:39,758 [wrapper] apfmon messages muted [2021-07-15 18:10:40] 2021-07-15 22:10:39,768 [wrapper] Test setup, not cleaning [2021-07-15 18:10:40] 2021-07-15 22:10:39,785 [wrapper] ==== wrapper stdout END ==== [2021-07-15 18:10:40] 2021-07-15 22:10:39,817 [wrapper] ==== wrapper stderr END ==== [2021-07-15 18:10:40] 2021-07-15 22:10:39,879 [wrapper] wrapperexiting ec=0, duration=5302 [2021-07-15 18:10:40] 2021-07-15 22:10:39,887 [wrapper] apfmon messages muted [2021-07-15 18:10:40] *** Error codes and diagnostics *** [2021-07-15 18:10:40] "exeErrorCode": 0, [2021-07-15 18:10:40] "exeErrorDiag": "", [2021-07-15 18:10:40] "pilotErrorCode": 0, [2021-07-15 18:10:40] "pilotErrorDiag": "", [2021-07-15 18:10:40] *** Listing of results directory *** [2021-07-15 18:10:40] total 43352 [2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc 3214 Jul 15 16:35 queuedata.json [2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc 334707 Jul 15 16:35 pilot2.tar.gz [2021-07-15 18:10:40] -rwx------ 1 boinc boinc 20591 Jul 15 16:35 runpilot2-wrapper.sh [2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc 107 Jul 15 16:42 wrapper_26015_x86_64-pc-linux-gnu [2021-07-15 18:10:40] -rwxr-xr-x 1 boinc boinc 6966 Jul 15 16:42 run_atlas [2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc 112 Jul 15 16:42 job.xml [2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc 6188 Jul 15 16:42 init_data.xml [2021-07-15 18:10:40] drwxrwx--x 2 boinc boinc 4096 Jul 15 16:42 shared [2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc 0 Jul 15 16:42 boinc_lockfile [2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc 36949600 Jul 15 16:42 EVNT.04972714._000039.pool.root.1 [2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc 16551 Jul 15 16:42 start_atlas.sh [2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc 344111 Jul 15 16:42 input.tar.gz [2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc 2579 Jul 15 16:42 pandaJob.out [2021-07-15 18:10:40] -rw------- 1 boinc boinc 1068213 Jul 15 16:43 agis_schedconf.cvmfs.json [2021-07-15 18:10:40] -rw------- 1 boinc boinc 1967101 Jul 15 16:43 cric_ddmendpoints.json [2021-07-15 18:10:40] drwx------ 4 boinc boinc 4096 Jul 15 16:43 pilot2 [2021-07-15 18:10:40] -rw------- 1 boinc boinc 1169404 Jul 15 18:06 output.1.93098ec5-f104-499d-add1-fe5bd32a6129_81859.pool.root [2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc 535 Jul 15 18:07 boinc_task_state.xml [2021-07-15 18:10:40] -rw------- 1 boinc boinc 1015 Jul 15 18:09 memory_monitor_summary.json [2021-07-15 18:10:40] -rw------- 1 boinc boinc 203421 Jul 15 18:09 93098ec5-f104-499d-add1-fe5bd32a6129_81859.1.job.log.tgz [2021-07-15 18:10:40] -rw------- 1 boinc boinc 7823 Jul 15 18:09 heartbeat.json [2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc 26 Jul 15 18:10 wrapper_checkpoint.txt [2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc 8192 Jul 15 18:10 boinc_mmap_file [2021-07-15 18:10:40] -rw------- 1 boinc boinc 7518 Jul 15 18:10 pilotlog.txt [2021-07-15 18:10:40] -rw------- 1 boinc boinc 381750 Jul 15 18:10 93098ec5-f104-499d-add1-fe5bd32a6129_81859.1.job.log [2021-07-15 18:10:40] -rw------- 1 boinc boinc 536 Jul 15 18:10 output.list [2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc 9429 Jul 15 18:10 runtime_log.err [2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc 748 Jul 15 18:10 runtime_log [2021-07-15 18:10:40] -rw------- 1 boinc boinc 1771520 Jul 15 18:10 result.tar.gz [2021-07-15 18:10:40] -rw------- 1 boinc boinc 565 Jul 15 18:10 ikINDmXGNOzn7Olcko1bjSoqABFKDmABFKDmumdXDmp1FKDmQf7frm.diag [2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc 29718 Jul 15 18:10 stderr.txt [2021-07-15 18:10:40] HITS file was successfully produced: [2021-07-15 18:10:40] -rw------- 1 boinc boinc 1169404 Jul 15 18:06 shared/HITS.pool.root.1 [2021-07-15 18:10:40] *** Contents of shared directory: *** [2021-07-15 18:10:40] total 39320 [2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc 36949600 Jul 15 16:42 ATLAS.root_0 [2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc 344111 Jul 15 16:42 input.tar.gz [2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc 16551 Jul 15 16:42 start_atlas.sh [2021-07-15 18:10:40] -rw------- 1 boinc boinc 1169404 Jul 15 18:06 HITS.pool.root.1 [2021-07-15 18:10:40] -rw------- 1 boinc boinc 1771520 Jul 15 18:10 result.tar.gz 18:10:42 (63016): run_atlas exited; CPU time 2388.476096 18:10:42 (63016): called boinc_finish(0) </stderr_txt> ]]>
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