Name ikINDmXGNOzn7Olcko1bjSoqABFKDmABFKDmumdXDmp1FKDmQf7frm_0
Workunit 2104821
Created 15 Jul 2021, 20:36:04 UTC
Sent 15 Jul 2021, 20:41:40 UTC
Report deadline 22 Jul 2021, 20:41:40 UTC
Received 15 Jul 2021, 22:12:07 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4357
Run time 1 hours 28 min 40 sec
CPU time 39 min 50 sec
Validate state Valid
Credit 19.62
Device peak FLOPS 3.04 GFLOPS
Application version ATLAS Simulation v1.04 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 1.65 GB
Peak swap size 34.88 GB
Peak disk usage 78.66 MB

Stderr output

<core_client_version>7.9.3</core_client_version>
<![CDATA[
<stderr_txt>
16:42:04 (63016): wrapper (7.7.26015): starting
16:42:04 (63016): wrapper: running run_atlas (--nthreads 1)
[2021-07-15 16:42:04] Arguments: --nthreads 1
[2021-07-15 16:42:04] Threads: 1
[2021-07-15 16:42:04] Checking for CVMFS
[2021-07-15 16:42:06] Probing /cvmfs/atlas.cern.ch... OK
[2021-07-15 16:42:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2021-07-15 16:42:08] Running cvmfs_config stat atlas.cern.ch
[2021-07-15 16:42:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2021-07-15 16:42:08] 2.9.0.0 63287 0 24720 88438 3 1 3691816 4194305 0 130560 0 0 100.000 0 0 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 0
[2021-07-15 16:42:08] CVMFS is ok
[2021-07-15 16:42:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2021-07-15 16:42:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2021-07-15 16:42:08] Small home clusters do not require a local http proxy but it is suggested if
[2021-07-15 16:42:08] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2021-07-15 16:42:08] Further information can be found at the LHC@home message board.
[2021-07-15 16:42:08] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2021-07-15 16:42:08] Checking for singularity binary...
[2021-07-15 16:42:08] Using singularity found in PATH at /usr/local/bin/singularity
[2021-07-15 16:42:08] Running /usr/local/bin/singularity --version
[2021-07-15 16:42:09] singularity version 3.7.2+10-ga969f0f8c
[2021-07-15 16:42:09] Checking singularity works with /usr/local/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2021-07-15 16:42:10] E5-2670
[2021-07-15 16:42:10] Singularity works
[2021-07-15 16:42:11] Starting ATLAS job with PandaID=5121292204
[2021-07-15 16:42:11] Running command: /usr/local/bin/singularity exec --pwd /var/lib/boinc-client/slots/36 -B /cvmfs,/var /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2021-07-15 18:10:40]  *** The last 200 lines of the pilot log: ***
[2021-07-15 18:10:40]       "model_name": "Intel(R) Xeon(R) CPU E5-2670 0 @ 2.60GHz", 
[2021-07-15 18:10:40]       "node": "E5-2670", 
[2021-07-15 18:10:40]       "platform": "Linux-4.15.0-142-generic-x86_64-with-centos-7.8.2003-Core"
[2021-07-15 18:10:40]     }, 
[2021-07-15 18:10:40]     "transform": {
[2021-07-15 18:10:40]       "cpuTime": 8, 
[2021-07-15 18:10:40]       "externalCpuTime": 166, 
[2021-07-15 18:10:40]       "wallTime": 4992
[2021-07-15 18:10:40]     }
[2021-07-15 18:10:40]   }
[2021-07-15 18:10:40] }
[2021-07-15 18:10:40] 2021-07-15 22:09:44,752 | DEBUG    | pilot.user.atlas.common          | update_server             | no need to update logstash for this job
[2021-07-15 18:10:40] 2021-07-15 22:09:44,752 | INFO     | pilot.control.job                | send_state                | pilot will not update the server (heartbeat message will be written to file)
[2021-07-15 18:10:40] 2021-07-15 22:09:44,752 | INFO     | pilot.control.job                | send_state                | job 5121292204 has finished - writing final server update
[2021-07-15 18:10:40] 2021-07-15 22:09:44,753 | DEBUG    | pilot.user.atlas.jobmetrics      | get_job_metrics_string    | job definition core count: 1
[2021-07-15 18:10:40] 2021-07-15 22:09:44,753 | INFO     | pilot.user.atlas.jobmetrics      | get_job_metrics_string    | will not add max space = -35665500 B to job metrics
[2021-07-15 18:10:40] 2021-07-15 22:09:44,755 | DEBUG    | pilot.api.analytics              | get_fitted_data           | removing tails from data to be fitted
[2021-07-15 18:10:40] 2021-07-15 22:09:44,756 | INFO     | pilot.api.analytics              | get_fitted_data           | fitting pss+swap vs Time
[2021-07-15 18:10:40] 2021-07-15 22:09:44,756 | INFO     | pilot.api.analytics              | get_fitted_data           | current memory leak: 236.11 B/s (using 76 data points, chi2=2928379)
[2021-07-15 18:10:40] 2021-07-15 22:09:44,757 | DEBUG    | pilot.user.atlas.jobmetrics      | get_job_metrics           | job metrics="actualCoreCount=4 nEvents=2 dbTime=293.7 dbData=4211388 leak=236.11 chi2=2928379 eventn
[2021-07-15 18:10:40] 2021-07-15 22:09:44,757 | INFO     | pilot.control.job                | get_data_structure        | mean actualcorecount: 6.985294
[2021-07-15 18:10:40] 2021-07-15 22:09:44,757 | INFO     | pilot.control.job                | get_data_structure        | total number of processed events: 2 (read)
[2021-07-15 18:10:40] 2021-07-15 22:09:44,782 | INFO     | pilot.util.container             | execute                   | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2021-07-15 18:10:40] 2021-07-15 22:09:44,859 | INFO     | pilot.user.atlas.utilities       | get_memory_values         | using path: /var/lib/boinc-client/slots/36/PanDA_Pilot-5121292204/memory_monitor_summary.json (trf n
[2021-07-15 18:10:40] 2021-07-15 22:09:44,861 | DEBUG    | pilot.user.atlas.utilities       | get_memory_monitor_info   | summary_dictionary={'Avg': {'nprocs': 4.939, 'nthreads': 5.891, 'pss': 1356616.0, 'rchar': 97807.0, 
[2021-07-15 18:10:40] 2021-07-15 22:09:44,862 | INFO     | pilot.user.atlas.utilities       | get_memory_monitor_info   | extracted standard info from prmon json
[2021-07-15 18:10:40] 2021-07-15 22:09:44,862 | INFO     | pilot.user.atlas.utilities       | get_memory_monitor_info   | extracted standard memory fields from prmon json
[2021-07-15 18:10:40] 2021-07-15 22:09:44,862 | INFO     | pilot.util.timing                | timing_report             | ..............................
[2021-07-15 18:10:40] 2021-07-15 22:09:44,862 | INFO     | pilot.util.timing                | timing_report             | . Timing measurements:
[2021-07-15 18:10:40] 2021-07-15 22:09:44,862 | INFO     | pilot.util.timing                | timing_report             | . get job = 1 s
[2021-07-15 18:10:40] 2021-07-15 22:09:44,862 | INFO     | pilot.util.timing                | timing_report             | . initial setup = 3 s
[2021-07-15 18:10:40] 2021-07-15 22:09:44,863 | INFO     | pilot.util.timing                | timing_report             | . payload setup = 66 s
[2021-07-15 18:10:40] 2021-07-15 22:09:44,863 | INFO     | pilot.util.timing                | timing_report             | . total setup = 69 s
[2021-07-15 18:10:40] 2021-07-15 22:09:44,863 | INFO     | pilot.util.timing                | timing_report             | . stage-in = 0 s
[2021-07-15 18:10:40] 2021-07-15 22:09:44,863 | INFO     | pilot.util.timing                | timing_report             | . payload execution = 5070 s
[2021-07-15 18:10:40] 2021-07-15 22:09:44,863 | INFO     | pilot.util.timing                | timing_report             | . stage-out = 1 s
[2021-07-15 18:10:40] 2021-07-15 22:09:44,863 | INFO     | pilot.util.timing                | timing_report             | ..............................
[2021-07-15 18:10:40] 2021-07-15 22:09:44,863 | DEBUG    | pilot.control.job                | send_state                | is_harvester_mode(args) : False
[2021-07-15 18:10:40] 2021-07-15 22:09:44,865 | DEBUG    | pilot.control.job                | write_heartbeat_to_file   | heartbeat dictionary: {'jobId': '5121292204', 'state': 'finished', 'timestamp': '2021-07-15T18:09:44
[2021-07-15 18:10:40] 2021-07-15 22:09:44,865 | DEBUG    | pilot.control.job                | write_heartbeat_to_file   | wrote heartbeat to file /var/lib/boinc-client/slots/36/heartbeat.json
[2021-07-15 18:10:40] 2021-07-15 22:09:44,866 | DEBUG    | pilot.control.job                | queue_monitor             | job 5121292204 was dequeued from the monitored payloads queue
[2021-07-15 18:10:40] 2021-07-15 22:09:45,047 | DEBUG    | pilot.control.job                | queue_monitor             | tmp job object deleted
[2021-07-15 18:10:40] 2021-07-15 22:09:45,541 | INFO     | pilot.control.job                | make_job_report           | 
[2021-07-15 18:10:40] 2021-07-15 22:09:45,542 | INFO     | pilot.control.job                | make_job_report           | job summary report
[2021-07-15 18:10:40] 2021-07-15 22:09:45,542 | INFO     | pilot.control.job                | make_job_report           | --------------------------------------------------
[2021-07-15 18:10:40] 2021-07-15 22:09:45,542 | INFO     | pilot.control.job                | make_job_report           | PanDA job id: 5121292204
[2021-07-15 18:10:40] 2021-07-15 22:09:45,542 | INFO     | pilot.control.job                | make_job_report           | task id: NULL
[2021-07-15 18:10:40] 2021-07-15 22:09:45,542 | INFO     | pilot.control.job                | make_job_report           | errors: (none)
[2021-07-15 18:10:40] 2021-07-15 22:09:45,542 | INFO     | pilot.control.job                | make_job_report           | status: LOG_TRANSFER = DONE 
[2021-07-15 18:10:40] 2021-07-15 22:09:45,543 | INFO     | pilot.control.job                | make_job_report           | pilot state: finished 
[2021-07-15 18:10:40] 2021-07-15 22:09:45,543 | INFO     | pilot.control.job                | make_job_report           | transexitcode: 0
[2021-07-15 18:10:40] 2021-07-15 22:09:45,543 | INFO     | pilot.control.job                | make_job_report           | exeerrorcode: 0
[2021-07-15 18:10:40] 2021-07-15 22:09:45,543 | INFO     | pilot.control.job                | make_job_report           | exeerrordiag: 
[2021-07-15 18:10:40] 2021-07-15 22:09:45,543 | INFO     | pilot.control.job                | make_job_report           | exitcode: 0
[2021-07-15 18:10:40] 2021-07-15 22:09:45,543 | INFO     | pilot.control.job                | make_job_report           | exitmsg: OK
[2021-07-15 18:10:40] 2021-07-15 22:09:45,544 | INFO     | pilot.control.job                | make_job_report           | cpuconsumptiontime: 2657 s
[2021-07-15 18:10:40] 2021-07-15 22:09:45,544 | INFO     | pilot.control.job                | make_job_report           | nevents: 2
[2021-07-15 18:10:40] 2021-07-15 22:09:45,544 | INFO     | pilot.control.job                | make_job_report           | neventsw: 0
[2021-07-15 18:10:40] 2021-07-15 22:09:45,544 | INFO     | pilot.control.job                | make_job_report           | pid: 82664
[2021-07-15 18:10:40] 2021-07-15 22:09:45,544 | INFO     | pilot.control.job                | make_job_report           | pgrp: 82664
[2021-07-15 18:10:40] 2021-07-15 22:09:45,544 | INFO     | pilot.control.job                | make_job_report           | corecount: 1
[2021-07-15 18:10:40] 2021-07-15 22:09:45,544 | INFO     | pilot.control.job                | make_job_report           | event service: False
[2021-07-15 18:10:40] 2021-07-15 22:09:45,545 | INFO     | pilot.control.job                | make_job_report           | sizes: {24114916: 3864854, 24114918: 3866131, 24114919: 3866410, 24114920: 3866352, 24114930: 386635
[2021-07-15 18:10:40] 2021-07-15 22:09:45,545 | INFO     | pilot.control.job                | make_job_report           | --------------------------------------------------
[2021-07-15 18:10:40] 2021-07-15 22:09:45,545 | INFO     | pilot.control.job                | make_job_report           | 
[2021-07-15 18:10:40] 2021-07-15 22:09:45,545 | DEBUG    | pilot.control.job                | has_job_completed         | ls -lF /var/lib/boinc-client/slots/36:
[2021-07-15 18:10:40] 
[2021-07-15 18:10:40] 2021-07-15 22:09:45,545 | INFO     | pilot.util.container             | execute                   | executing command: ls -lF /var/lib/boinc-client/slots/36
[2021-07-15 18:10:40] 2021-07-15 22:09:45,585 | DEBUG    | pilot.control.job                | has_job_completed         | total 41912
[2021-07-15 18:10:40] -rw------- 1 boinc boinc   366924 Jul 15 18:09 93098ec5-f104-499d-add1-fe5bd32a6129_81859.1.job.log
[2021-07-15 18:10:40] -rw------- 1 boinc boinc   203421 Jul 15 18:09 93098ec5-f104-499d-add1-fe5bd32a6129_81859.1.job.log.tgz
[2021-07-15 18:10:40] -rw------- 1 boinc boinc  1068213 Jul 15 16:43 agis_schedconf.cvmfs.json
[2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc        0 Jul 15 16:42 boinc_lockfile
[2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc     8192 Jul 15 18:09 boinc_mmap_file
[2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc      535 Jul 15 18:07 boinc_task_state.xml
[2021-07-15 18:10:40] -rw------- 1 boinc boinc  1967101 Jul 15 16:43 cric_ddmendpoints.json
[2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc 36949600 Jul 15 16:42 EVNT.04972714._000039.pool.root.1
[2021-07-15 18:10:40] -rw------- 1 boinc boinc     7823 Jul 15 18:09 heartbeat.json
[2021-07-15 18:10:40] -rw------- 1 boinc boinc      130 Jul 15 16:42 ikINDmXGNOzn7Olcko1bjSoqABFKDmABFKDmumdXDmp1FKDmQf7frm.diag
[2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc     6188 Jul 15 16:42 init_data.xml
[2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc   344111 Jul 15 16:42 input.tar.gz
[2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc      112 Jul 15 16:42 job.xml
[2021-07-15 18:10:40] -rw------- 1 boinc boinc     1015 Jul 15 18:09 memory_monitor_summary.json
[2021-07-15 18:10:40] -rw------- 1 boinc boinc  1169404 Jul 15 18:06 output.1.93098ec5-f104-499d-add1-fe5bd32a6129_81859.pool.root
[2021-07-15 18:10:40] -rw------- 1 boinc boinc      536 Jul 15 18:09 output.list
[2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc     2579 Jul 15 16:42 pandaJob.out
[2021-07-15 18:10:40] drwxrwx--- 2 boinc boinc     4096 Jul 15 18:09 PanDA_Pilot-5121292204/
[2021-07-15 18:10:40] drwx------ 4 boinc boinc     4096 Jul 15 16:43 pilot2/
[2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc   334707 Jul 15 16:35 pilot2.tar.gz
[2021-07-15 18:10:40] -rw------- 1 boinc boinc   347954 Jul 15 18:09 pilotlog.txt
[2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc     3214 Jul 15 16:35 queuedata.json
[2021-07-15 18:10:40] -rwxr-xr-x 1 boinc boinc     6966 Jul 15 16:42 run_atlas*
[2021-07-15 18:10:40] -rwx------ 1 boinc boinc    20591 Jul 15 16:35 runpilot2-wrapper.sh*
[2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc      407 Jul 15 16:42 runtime_log
[2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc     5574 Jul 15 16:42 runtime_log.err
[2021-07-15 18:10:40] drwxrwx--x 2 boinc boinc     4096 Jul 15 16:42 shared/
[2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc    16551 Jul 15 16:42 start_atlas.sh
[2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc     2193 Jul 15 16:42 stderr.txt
[2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc      107 Jul 15 16:42 wrapper_26015_x86_64-pc-linux-gnu
[2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc       26 Jul 15 18:09 wrapper_checkpoint.txt
[2021-07-15 18:10:40] 2021-07-15 22:09:45,586 | INFO     | pilot.util.queuehandling         | queue_report              | queue jobs has 0 job(s)
[2021-07-15 18:10:40] 2021-07-15 22:09:45,586 | INFO     | pilot.util.queuehandling         | queue_report              | queue payloads has 0 job(s)
[2021-07-15 18:10:40] 2021-07-15 22:09:45,586 | INFO     | pilot.util.queuehandling         | queue_report              | queue data_in has 0 job(s)
[2021-07-15 18:10:40] 2021-07-15 22:09:45,586 | INFO     | pilot.util.queuehandling         | queue_report              | queue data_out has 0 job(s)
[2021-07-15 18:10:40] 2021-07-15 22:09:45,587 | INFO     | pilot.util.queuehandling         | queue_report              | queue current_data_in has 0 job(s)
[2021-07-15 18:10:40] 2021-07-15 22:09:45,587 | INFO     | pilot.util.queuehandling         | queue_report              | queue validated_jobs has 0 job(s)
[2021-07-15 18:10:40] 2021-07-15 22:09:45,587 | INFO     | pilot.util.queuehandling         | queue_report              | queue validated_payloads has 0 job(s)
[2021-07-15 18:10:40] 2021-07-15 22:09:45,587 | INFO     | pilot.util.queuehandling         | queue_report              | queue monitored_payloads has 0 job(s)
[2021-07-15 18:10:40] 2021-07-15 22:09:45,587 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_jobs has 0 job(s)
[2021-07-15 18:10:40] 2021-07-15 22:09:45,587 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_payloads has 0 job(s)
[2021-07-15 18:10:40] 2021-07-15 22:09:45,587 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_data_in has 1 job(s)
[2021-07-15 18:10:40] 2021-07-15 22:09:45,588 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_data_out has 0 job(s)
[2021-07-15 18:10:40] 2021-07-15 22:09:45,588 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_jobs has 0 job(s)
[2021-07-15 18:10:40] 2021-07-15 22:09:45,588 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_payloads has 0 job(s)
[2021-07-15 18:10:40] 2021-07-15 22:09:45,588 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_data_in has 0 job(s)
[2021-07-15 18:10:40] 2021-07-15 22:09:45,588 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_data_out has 0 job(s)
[2021-07-15 18:10:40] 2021-07-15 22:09:45,588 | INFO     | pilot.util.queuehandling         | queue_report              | queue completed_jobs has 0 job(s)
[2021-07-15 18:10:40] 2021-07-15 22:09:45,588 | INFO     | pilot.util.queuehandling         | queue_report              | queue completed_jobids has 1 job(s)
[2021-07-15 18:10:40] 2021-07-15 22:09:45,589 | INFO     | pilot.control.job                | has_job_completed         | job 5121292204 has completed (purged errors)
[2021-07-15 18:10:40] 2021-07-15 22:09:45,589 | INFO     | pilot.util.processes             | cleanup                   | overall cleanup function is called
[2021-07-15 18:10:40] 2021-07-15 22:09:45,593 | DEBUG    | pilot.util.processes             | cleanup                   | work directory was removed: /var/lib/boinc-client/slots/36/PanDA_Pilot-5121292204
[2021-07-15 18:10:40] 2021-07-15 22:09:46,596 | INFO     | pilot.info.jobdata               | collect_zombies           | --- collectZombieJob: --- 10, [82664]
[2021-07-15 18:10:40] 2021-07-15 22:09:46,597 | INFO     | pilot.info.jobdata               | collect_zombies           | zombie collector trying to kill pid 82664
[2021-07-15 18:10:40] 2021-07-15 22:09:46,597 | INFO     | pilot.info.jobdata               | collect_zombies           | harmless exception when collecting zombies: [Errno 10] No child processes
[2021-07-15 18:10:40] 2021-07-15 22:09:47,600 | INFO     | pilot.util.processes             | cleanup                   | collected zombie processes
[2021-07-15 18:10:40] 2021-07-15 22:09:47,601 | INFO     | pilot.util.processes             | cleanup                   | will now attempt to kill all subprocesses of pid=82664
[2021-07-15 18:10:40] 2021-07-15 22:09:47,722 | INFO     | pilot.util.processes             | kill_processes            | process IDs to be killed: [82664] (in reverse order)
[2021-07-15 18:10:40] 2021-07-15 22:09:47,832 | WARNING  | pilot.util.processes             | kill_processes            | found no corresponding commands to process id(s)
[2021-07-15 18:10:40] 2021-07-15 22:09:47,833 | INFO     | pilot.util.processes             | kill_orphans              | Do not look for orphan processes in BOINC jobs
[2021-07-15 18:10:40] 2021-07-15 22:09:47,833 | DEBUG    | pilot.util.queuehandling         | purge_queue               | queue purged
[2021-07-15 18:10:40] 2021-07-15 22:09:47,834 | INFO     | pilot.control.job                | retrieve                  | ready for new job
[2021-07-15 18:10:40] 2021-07-15 22:09:47,834 | INFO     | root                             | retrieve                  | pilot has finished for previous job - re-establishing logging
[2021-07-15 18:10:40] 2021-07-15 22:09:47,835 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ****************************************
[2021-07-15 18:10:40] 2021-07-15 22:09:47,836 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ***  PanDA Pilot version 2.12.2 (1)  ***
[2021-07-15 18:10:40] 2021-07-15 22:09:47,836 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ****************************************
[2021-07-15 18:10:40] 2021-07-15 22:09:47,836 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | 
[2021-07-15 18:10:40] 2021-07-15 22:09:47,858 | INFO     | pilot.util.auxiliary             | display_architecture_info | architecture information:
[2021-07-15 18:10:40] 2021-07-15 22:09:48,132 | INFO     | pilot.util.auxiliary             | display_architecture_info | 
[2021-07-15 18:10:40] LSB Version:	:core-4.1-amd64:core-4.1-noarch
[2021-07-15 18:10:40] Distributor ID:	CentOS
[2021-07-15 18:10:40] Description:	CentOS Linux release 7.8.2003 (Core)
[2021-07-15 18:10:40] Release:	7.8.2003
[2021-07-15 18:10:40] Codename:	Core
[2021-07-15 18:10:40] 2021-07-15 22:09:48,133 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ****************************************
[2021-07-15 18:10:40] 2021-07-15 22:09:48,636 | DEBUG    | pilot.util.monitoring            | check_local_space         | checking local space on /var/lib/boinc-client/slots/36
[2021-07-15 18:10:40] 2021-07-15 22:09:48,920 | INFO     | pilot.util.monitoring            | check_local_space         | sufficient remaining disk space (52969865216 B)
[2021-07-15 18:10:40] 2021-07-15 22:09:48,922 | WARNING  | pilot.control.job                | proceed_with_getjob       | since timefloor is set to 0, pilot was only allowed to run one job
[2021-07-15 18:10:40] 2021-07-15 22:09:48,924 | DEBUG    | pilot.control.job                | retrieve                  | will not set job_aborted yet
[2021-07-15 18:10:40] 2021-07-15 22:09:48,924 | WARNING  | pilot.util.common                | should_abort              | data:copytool_out:received graceful stop - abort after this iteration
[2021-07-15 18:10:40] 2021-07-15 22:09:48,925 | WARNING  | pilot.control.monitor            | control                   | aborting monitor loop since graceful_stop has been set
[2021-07-15 18:10:40] 2021-07-15 22:09:48,925 | DEBUG    | pilot.control.job                | retrieve                  | [job] retrieve thread has finished
[2021-07-15 18:10:40] 2021-07-15 22:09:48,926 | INFO     | pilot.control.monitor            | control                   | [monitor] control thread has ended
[2021-07-15 18:10:40] 2021-07-15 22:09:49,033 | DEBUG    | pilot.control.job                | create_data_payload       | will not set job_aborted yet
[2021-07-15 18:10:40] 2021-07-15 22:09:49,034 | DEBUG    | pilot.control.job                | create_data_payload       | [job] create_data_payload thread has finished
[2021-07-15 18:10:40] 2021-07-15 22:09:49,417 | DEBUG    | pilot.control.payload            | control                   | payload control ending since graceful_stop has been set
[2021-07-15 18:10:40] 2021-07-15 22:09:49,419 | DEBUG    | pilot.control.payload            | control                   | will not set job_aborted yet
[2021-07-15 18:10:40] 2021-07-15 22:09:49,419 | DEBUG    | pilot.control.payload            | control                   | [payload] control thread has finished
[2021-07-15 18:10:40] 2021-07-15 22:09:49,535 | DEBUG    | pilot.control.job                | validate                  | will not set job_aborted yet
[2021-07-15 18:10:40] 2021-07-15 22:09:49,538 | DEBUG    | pilot.control.job                | validate                  | [job] validate thread has finished
[2021-07-15 18:10:40] 2021-07-15 22:09:49,549 | DEBUG    | pilot.control.payload            | execute_payloads          | will not set job_aborted yet
[2021-07-15 18:10:40] 2021-07-15 22:09:49,551 | INFO     | pilot.control.payload            | execute_payloads          | [payload] execute_payloads thread has finished
[2021-07-15 18:10:40] 2021-07-15 22:09:49,654 | DEBUG    | pilot.control.payload            | validate_post             | will not set job_aborted yet
[2021-07-15 18:10:40] 2021-07-15 22:09:49,656 | INFO     | pilot.control.payload            | validate_post             | [payload] validate_post thread has finished
[2021-07-15 18:10:40] 2021-07-15 22:09:49,689 | DEBUG    | pilot.control.data               | control                   | data control ending since graceful_stop has been set
[2021-07-15 18:10:40] 2021-07-15 22:09:49,690 | DEBUG    | pilot.control.data               | control                   | will not set job_aborted yet
[2021-07-15 18:10:40] 2021-07-15 22:09:49,691 | DEBUG    | pilot.control.data               | control                   | [data] control thread has finished
[2021-07-15 18:10:40] 2021-07-15 22:09:49,874 | DEBUG    | pilot.control.payload            | validate_pre              | will not set job_aborted yet
[2021-07-15 18:10:40] 2021-07-15 22:09:49,876 | INFO     | pilot.control.payload            | validate_pre              | [payload] validate_pre thread has finished
[2021-07-15 18:10:40] 2021-07-15 22:09:49,928 | DEBUG    | pilot.control.data               | copytool_out              | will not set job_aborted yet
[2021-07-15 18:10:40] 2021-07-15 22:09:49,931 | DEBUG    | pilot.control.data               | copytool_out              | [data] copytool_out thread has finished
[2021-07-15 18:10:40] 2021-07-15 22:09:50,038 | DEBUG    | pilot.control.data               | copytool_in               | will not set job_aborted yet
[2021-07-15 18:10:40] 2021-07-15 22:09:50,042 | DEBUG    | pilot.control.data               | copytool_in               | [data] copytool_in thread has finished
[2021-07-15 18:10:40] 2021-07-15 22:09:50,057 | WARNING  | pilot.util.common                | should_abort              | job:queue_monitor:received graceful stop - abort after this iteration
[2021-07-15 18:10:40] 2021-07-15 22:09:50,059 | DEBUG    | pilot.control.job                | queue_monitor             | will not set job_aborted yet
[2021-07-15 18:10:40] 2021-07-15 22:09:50,060 | DEBUG    | pilot.control.job                | queue_monitor             | [job] queue monitor thread has finished
[2021-07-15 18:10:40] 2021-07-15 22:09:50,105 | DEBUG    | pilot.control.job                | control                   | job control ending since graceful_stop has been set
[2021-07-15 18:10:40] 2021-07-15 22:09:50,108 | DEBUG    | pilot.control.job                | control                   | will not set job_aborted yet
[2021-07-15 18:10:40] 2021-07-15 22:09:50,108 | DEBUG    | pilot.control.job                | control                   | [job] control thread has finished
[2021-07-15 18:10:40] 2021-07-15 22:09:50,151 | DEBUG    | pilot.control.payload            | failed_post               | will not set job_aborted yet
[2021-07-15 18:10:40] 2021-07-15 22:09:50,153 | INFO     | pilot.control.payload            | failed_post               | [payload] failed_post thread has finished
[2021-07-15 18:10:40] 2021-07-15 22:09:50,762 | WARNING  | pilot.util.common                | should_abort              | data:queue_monitoring:received graceful stop - abort after this iteration
[2021-07-15 18:10:40] 2021-07-15 22:09:53,771 | DEBUG    | pilot.control.data               | queue_monitoring          | will not set job_aborted yet
[2021-07-15 18:10:40] 2021-07-15 22:09:53,773 | DEBUG    | pilot.control.data               | queue_monitoring          | [data] queue_monitor thread has finished
[2021-07-15 18:10:40] 2021-07-15 22:10:39,137 | WARNING  | pilot.control.job                | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 75 s)
[2021-07-15 18:10:40] 2021-07-15 22:10:39,138 | DEBUG    | pilot.util.processes             | threads_aborted           | aborting since the last relevant thread is about to finish
[2021-07-15 18:10:40] 2021-07-15 22:10:39,139 | DEBUG    | pilot.control.job                | job_monitor               | will proceed to set job_aborted
[2021-07-15 18:10:40] 2021-07-15 22:10:39,139 | DEBUG    | pilot.control.job                | job_monitor               | [job] job monitor thread has finished
[2021-07-15 18:10:40] 2021-07-15 22:10:39,524 | INFO     | pilot.workflow.generic           | run                       | end of generic workflow (traces error code: 0)
[2021-07-15 18:10:40] 2021-07-15 22:10:39,526 | INFO     | root                             | wrap_up                   | traces error code: 0
[2021-07-15 18:10:40] 2021-07-15 22:10:39,526 | INFO     | root                             | wrap_up                   | pilot has finished
[2021-07-15 18:10:40] 2021-07-15 22:10:39,683 [wrapper] ==== pilot stdout END ====
[2021-07-15 18:10:40] 2021-07-15 22:10:39,691 [wrapper] ==== wrapper stdout RESUME ====
[2021-07-15 18:10:40] 2021-07-15 22:10:39,702 [wrapper] Pilot exit status: 0
[2021-07-15 18:10:40] 2021-07-15 22:10:39,734 [wrapper] pandaids: 5121292204
[2021-07-15 18:10:40] 2021-07-15 22:10:39,758 [wrapper] apfmon messages muted
[2021-07-15 18:10:40] 2021-07-15 22:10:39,768 [wrapper] Test setup, not cleaning
[2021-07-15 18:10:40] 2021-07-15 22:10:39,785 [wrapper] ==== wrapper stdout END ====
[2021-07-15 18:10:40] 2021-07-15 22:10:39,817 [wrapper] ==== wrapper stderr END ====
[2021-07-15 18:10:40] 2021-07-15 22:10:39,879 [wrapper] wrapperexiting ec=0, duration=5302
[2021-07-15 18:10:40] 2021-07-15 22:10:39,887 [wrapper] apfmon messages muted
[2021-07-15 18:10:40]  *** Error codes and diagnostics ***
[2021-07-15 18:10:40]     "exeErrorCode": 0,
[2021-07-15 18:10:40]     "exeErrorDiag": "",
[2021-07-15 18:10:40]     "pilotErrorCode": 0,
[2021-07-15 18:10:40]     "pilotErrorDiag": "",
[2021-07-15 18:10:40]  *** Listing of results directory ***
[2021-07-15 18:10:40] total 43352
[2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc     3214 Jul 15 16:35 queuedata.json
[2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc   334707 Jul 15 16:35 pilot2.tar.gz
[2021-07-15 18:10:40] -rwx------ 1 boinc boinc    20591 Jul 15 16:35 runpilot2-wrapper.sh
[2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc      107 Jul 15 16:42 wrapper_26015_x86_64-pc-linux-gnu
[2021-07-15 18:10:40] -rwxr-xr-x 1 boinc boinc     6966 Jul 15 16:42 run_atlas
[2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc      112 Jul 15 16:42 job.xml
[2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc     6188 Jul 15 16:42 init_data.xml
[2021-07-15 18:10:40] drwxrwx--x 2 boinc boinc     4096 Jul 15 16:42 shared
[2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc        0 Jul 15 16:42 boinc_lockfile
[2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc 36949600 Jul 15 16:42 EVNT.04972714._000039.pool.root.1
[2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc    16551 Jul 15 16:42 start_atlas.sh
[2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc   344111 Jul 15 16:42 input.tar.gz
[2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc     2579 Jul 15 16:42 pandaJob.out
[2021-07-15 18:10:40] -rw------- 1 boinc boinc  1068213 Jul 15 16:43 agis_schedconf.cvmfs.json
[2021-07-15 18:10:40] -rw------- 1 boinc boinc  1967101 Jul 15 16:43 cric_ddmendpoints.json
[2021-07-15 18:10:40] drwx------ 4 boinc boinc     4096 Jul 15 16:43 pilot2
[2021-07-15 18:10:40] -rw------- 1 boinc boinc  1169404 Jul 15 18:06 output.1.93098ec5-f104-499d-add1-fe5bd32a6129_81859.pool.root
[2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc      535 Jul 15 18:07 boinc_task_state.xml
[2021-07-15 18:10:40] -rw------- 1 boinc boinc     1015 Jul 15 18:09 memory_monitor_summary.json
[2021-07-15 18:10:40] -rw------- 1 boinc boinc   203421 Jul 15 18:09 93098ec5-f104-499d-add1-fe5bd32a6129_81859.1.job.log.tgz
[2021-07-15 18:10:40] -rw------- 1 boinc boinc     7823 Jul 15 18:09 heartbeat.json
[2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc       26 Jul 15 18:10 wrapper_checkpoint.txt
[2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc     8192 Jul 15 18:10 boinc_mmap_file
[2021-07-15 18:10:40] -rw------- 1 boinc boinc     7518 Jul 15 18:10 pilotlog.txt
[2021-07-15 18:10:40] -rw------- 1 boinc boinc   381750 Jul 15 18:10 93098ec5-f104-499d-add1-fe5bd32a6129_81859.1.job.log
[2021-07-15 18:10:40] -rw------- 1 boinc boinc      536 Jul 15 18:10 output.list
[2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc     9429 Jul 15 18:10 runtime_log.err
[2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc      748 Jul 15 18:10 runtime_log
[2021-07-15 18:10:40] -rw------- 1 boinc boinc  1771520 Jul 15 18:10 result.tar.gz
[2021-07-15 18:10:40] -rw------- 1 boinc boinc      565 Jul 15 18:10 ikINDmXGNOzn7Olcko1bjSoqABFKDmABFKDmumdXDmp1FKDmQf7frm.diag
[2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc    29718 Jul 15 18:10 stderr.txt
[2021-07-15 18:10:40] HITS file was successfully produced:
[2021-07-15 18:10:40] -rw------- 1 boinc boinc 1169404 Jul 15 18:06 shared/HITS.pool.root.1
[2021-07-15 18:10:40]  *** Contents of shared directory: ***
[2021-07-15 18:10:40] total 39320
[2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc 36949600 Jul 15 16:42 ATLAS.root_0
[2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc   344111 Jul 15 16:42 input.tar.gz
[2021-07-15 18:10:40] -rw-r--r-- 1 boinc boinc    16551 Jul 15 16:42 start_atlas.sh
[2021-07-15 18:10:40] -rw------- 1 boinc boinc  1169404 Jul 15 18:06 HITS.pool.root.1
[2021-07-15 18:10:40] -rw------- 1 boinc boinc  1771520 Jul 15 18:10 result.tar.gz
18:10:42 (63016): run_atlas exited; CPU time 2388.476096
18:10:42 (63016): called boinc_finish(0)

</stderr_txt>
]]>


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