Name | 9XJMDmfiOOzn7Olcko1bjSoqABFKDmABFKDmumdXDmz1FKDmvpaxMm_0 |
Workunit | 2104862 |
Created | 15 Jul 2021, 22:09:08 UTC |
Sent | 15 Jul 2021, 22:12:07 UTC |
Report deadline | 22 Jul 2021, 22:12:07 UTC |
Received | 16 Jul 2021, 1:02:38 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 4357 |
Run time | 2 hours 34 min 37 sec |
CPU time | 1 hours 28 min 47 sec |
Validate state | Valid |
Credit | 34.29 |
Device peak FLOPS | 3.04 GFLOPS |
Application version | ATLAS Simulation v1.04 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.56 GB |
Peak swap size | 30.45 GB |
Peak disk usage | 84.92 MB |
<core_client_version>7.9.3</core_client_version> <![CDATA[ <stderr_txt> 18:12:44 (136231): wrapper (7.7.26015): starting 18:12:44 (136231): wrapper: running run_atlas (--nthreads 1) [2021-07-15 18:12:44] Arguments: --nthreads 1 [2021-07-15 18:12:44] Threads: 1 [2021-07-15 18:12:44] Checking for CVMFS [2021-07-15 18:12:46] Probing /cvmfs/atlas.cern.ch... OK [2021-07-15 18:12:46] Probing /cvmfs/atlas-condb.cern.ch... OK [2021-07-15 18:12:46] Running cvmfs_config stat atlas.cern.ch [2021-07-15 18:12:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2021-07-15 18:12:47] 2.9.0.0 63287 90 45772 88442 1 26 3723057 4194304 99 130560 0 141739 99.969 4978 1159 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 0 [2021-07-15 18:12:47] CVMFS is ok [2021-07-15 18:12:47] Efficiency of ATLAS tasks can be improved by the following measure(s): [2021-07-15 18:12:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io. [2021-07-15 18:12:47] Small home clusters do not require a local http proxy but it is suggested if [2021-07-15 18:12:47] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks. [2021-07-15 18:12:47] Further information can be found at the LHC@home message board. [2021-07-15 18:12:47] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2021-07-15 18:12:47] Checking for singularity binary... [2021-07-15 18:12:47] Using singularity found in PATH at /usr/local/bin/singularity [2021-07-15 18:12:47] Running /usr/local/bin/singularity --version [2021-07-15 18:12:47] singularity version 3.7.2+10-ga969f0f8c [2021-07-15 18:12:47] Checking singularity works with /usr/local/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2021-07-15 18:12:48] E5-2670 [2021-07-15 18:12:48] Singularity works [2021-07-15 18:12:49] Starting ATLAS job with PandaID=5121347889 [2021-07-15 18:12:49] Running command: /usr/local/bin/singularity exec --pwd /var/lib/boinc-client/slots/36 -B /cvmfs,/var /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2021-07-15 20:47:37] *** The last 200 lines of the pilot log: *** [2021-07-15 20:47:37] 2021-07-16 00:46:39,036 | INFO | pilot.util.container | execute | executing command: curl --connect-timeout 20 --max-time 120 -H "Content-Type: application/json" -X P [2021-07-15 20:47:37] 2021-07-16 00:46:41,132 | DEBUG | pilot.user.atlas.common | update_server | sent prmon JSON dictionary to logstash server [2021-07-15 20:47:37] 2021-07-16 00:46:41,132 | DEBUG | pilot.user.atlas.common | update_server | stdout: ok [2021-07-15 20:47:37] 2021-07-16 00:46:41,133 | DEBUG | pilot.user.atlas.common | update_server | stderr: % Total % Received % Xferd Average Speed Time Time Time Current [2021-07-15 20:47:37] Dload Upload Total Spent Left Speed [2021-07-15 20:47:37] [2021-07-15 20:47:37] 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 [2021-07-15 20:47:37] 0 0 0 0 0 0 0 0 --:--:-- 0:00:01 --:--:-- 0 [2021-07-15 20:47:37] 100 42590 100 2 100 42588 1 21639 0:00:02 0:00:01 0:00:01 21640 [2021-07-15 20:47:37] [2021-07-15 20:47:37] 2021-07-16 00:46:41,133 | INFO | pilot.control.job | send_state | pilot will not update the server (heartbeat message will be written to file) [2021-07-15 20:47:37] 2021-07-16 00:46:41,134 | INFO | pilot.control.job | send_state | job 5121347889 has finished - writing final server update [2021-07-15 20:47:37] 2021-07-16 00:46:41,134 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics_string | job definition core count: 1 [2021-07-15 20:47:37] 2021-07-16 00:46:41,135 | WARNING | pilot.user.atlas.common | get_executor_dictionary | no such key: executor [2021-07-15 20:47:37] 2021-07-16 00:46:41,135 | WARNING | pilot.user.atlas.common | get_executor_dictionary | no such key: executor [2021-07-15 20:47:37] 2021-07-16 00:46:41,135 | INFO | pilot.user.atlas.jobmetrics | get_job_metrics_string | will not add max space = -37942225 B to job metrics [2021-07-15 20:47:37] 2021-07-16 00:46:41,140 | DEBUG | pilot.api.analytics | get_fitted_data | removing tails from data to be fitted [2021-07-15 20:47:37] 2021-07-16 00:46:41,141 | INFO | pilot.api.analytics | get_fitted_data | fitting pss+swap vs Time [2021-07-15 20:47:37] 2021-07-16 00:46:41,142 | INFO | pilot.api.analytics | get_fitted_data | current memory leak: 128.19 B/s (using 141 data points, chi2=3182204) [2021-07-15 20:47:37] 2021-07-16 00:46:41,143 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics | job metrics="actualCoreCount=5 nEvents=2 leak=128.19 chi2=3182204 eventnumber=14001" [2021-07-15 20:47:37] 2021-07-16 00:46:41,143 | INFO | pilot.control.job | get_data_structure | mean actualcorecount: 6.578512 [2021-07-15 20:47:37] 2021-07-16 00:46:41,144 | INFO | pilot.control.job | get_data_structure | total number of processed events: 2 (read) [2021-07-15 20:47:37] 2021-07-16 00:46:41,165 | INFO | pilot.util.container | execute | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2021-07-15 20:47:37] 2021-07-16 00:46:41,322 | INFO | pilot.user.atlas.utilities | get_memory_values | using path: /var/lib/boinc-client/slots/36/PanDA_Pilot-5121347889/memory_monitor_summary.json (trf n [2021-07-15 20:47:37] 2021-07-16 00:46:41,325 | DEBUG | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'Avg': {'nprocs': 3.972, 'nthreads': 4.959, 'pss': 1134169.0, 'rchar': 36222.0, [2021-07-15 20:47:37] 2021-07-16 00:46:41,325 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard info from prmon json [2021-07-15 20:47:37] 2021-07-16 00:46:41,325 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard memory fields from prmon json [2021-07-15 20:47:37] 2021-07-16 00:46:41,326 | INFO | pilot.util.timing | timing_report | .............................. [2021-07-15 20:47:37] 2021-07-16 00:46:41,326 | INFO | pilot.util.timing | timing_report | . Timing measurements: [2021-07-15 20:47:37] 2021-07-16 00:46:41,326 | INFO | pilot.util.timing | timing_report | . get job = 0 s [2021-07-15 20:47:37] 2021-07-16 00:46:41,326 | INFO | pilot.util.timing | timing_report | . initial setup = 1 s [2021-07-15 20:47:37] 2021-07-16 00:46:41,326 | INFO | pilot.util.timing | timing_report | . payload setup = 66 s [2021-07-15 20:47:37] 2021-07-16 00:46:41,326 | INFO | pilot.util.timing | timing_report | . total setup = 67 s [2021-07-15 20:47:37] 2021-07-16 00:46:41,327 | INFO | pilot.util.timing | timing_report | . stage-in = 0 s [2021-07-15 20:47:37] 2021-07-16 00:46:41,327 | INFO | pilot.util.timing | timing_report | . payload execution = 9053 s [2021-07-15 20:47:37] 2021-07-16 00:46:41,327 | INFO | pilot.util.timing | timing_report | . stage-out = 1 s [2021-07-15 20:47:37] 2021-07-16 00:46:41,327 | INFO | pilot.util.timing | timing_report | .............................. [2021-07-15 20:47:37] 2021-07-16 00:46:41,327 | DEBUG | pilot.control.job | send_state | is_harvester_mode(args) : False [2021-07-15 20:47:37] 2021-07-16 00:46:41,329 | DEBUG | pilot.control.job | write_heartbeat_to_file | heartbeat dictionary: {'jobId': '5121347889', 'state': 'finished', 'timestamp': '2021-07-15T20:46:41 [2021-07-15 20:47:37] 2021-07-16 00:46:41,329 | DEBUG | pilot.control.job | write_heartbeat_to_file | wrote heartbeat to file /var/lib/boinc-client/slots/36/heartbeat.json [2021-07-15 20:47:37] 2021-07-16 00:46:41,329 | DEBUG | pilot.control.job | queue_monitor | job 5121347889 was dequeued from the monitored payloads queue [2021-07-15 20:47:37] 2021-07-16 00:46:41,481 | DEBUG | pilot.control.job | queue_monitor | tmp job object deleted [2021-07-15 20:47:37] 2021-07-16 00:46:41,482 | INFO | pilot.control.job | make_job_report | [2021-07-15 20:47:37] 2021-07-16 00:46:41,482 | INFO | pilot.control.job | make_job_report | job summary report [2021-07-15 20:47:37] 2021-07-16 00:46:41,482 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2021-07-15 20:47:37] 2021-07-16 00:46:41,482 | INFO | pilot.control.job | make_job_report | PanDA job id: 5121347889 [2021-07-15 20:47:37] 2021-07-16 00:46:41,482 | INFO | pilot.control.job | make_job_report | task id: NULL [2021-07-15 20:47:37] 2021-07-16 00:46:41,483 | INFO | pilot.control.job | make_job_report | errors: (none) [2021-07-15 20:47:37] 2021-07-16 00:46:41,483 | INFO | pilot.control.job | make_job_report | status: LOG_TRANSFER = DONE [2021-07-15 20:47:37] 2021-07-16 00:46:41,483 | INFO | pilot.control.job | make_job_report | pilot state: finished [2021-07-15 20:47:37] 2021-07-16 00:46:41,483 | INFO | pilot.control.job | make_job_report | transexitcode: 0 [2021-07-15 20:47:37] 2021-07-16 00:46:41,483 | INFO | pilot.control.job | make_job_report | exeerrorcode: 0 [2021-07-15 20:47:37] 2021-07-16 00:46:41,483 | INFO | pilot.control.job | make_job_report | exeerrordiag: [2021-07-15 20:47:37] 2021-07-16 00:46:41,483 | INFO | pilot.control.job | make_job_report | exitcode: 0 [2021-07-15 20:47:37] 2021-07-16 00:46:41,484 | INFO | pilot.control.job | make_job_report | exitmsg: OK [2021-07-15 20:47:37] 2021-07-16 00:46:41,484 | INFO | pilot.control.job | make_job_report | cpuconsumptiontime: 5523 s [2021-07-15 20:47:37] 2021-07-16 00:46:41,484 | INFO | pilot.control.job | make_job_report | nevents: 2 [2021-07-15 20:47:37] 2021-07-16 00:46:41,485 | INFO | pilot.control.job | make_job_report | neventsw: 0 [2021-07-15 20:47:37] 2021-07-16 00:46:41,485 | INFO | pilot.control.job | make_job_report | pid: 154749 [2021-07-15 20:47:37] 2021-07-16 00:46:41,485 | INFO | pilot.control.job | make_job_report | pgrp: 154749 [2021-07-15 20:47:37] 2021-07-16 00:46:41,485 | INFO | pilot.control.job | make_job_report | corecount: 1 [2021-07-15 20:47:37] 2021-07-16 00:46:41,485 | INFO | pilot.control.job | make_job_report | event service: False [2021-07-15 20:47:37] 2021-07-16 00:46:41,485 | INFO | pilot.control.job | make_job_report | sizes: {24120350: 3864991, 24120351: 3866268, 24120352: 3866381, 24120353: 3866603, 24120364: 386648 [2021-07-15 20:47:37] 2021-07-16 00:46:41,486 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2021-07-15 20:47:37] 2021-07-16 00:46:41,486 | INFO | pilot.control.job | make_job_report | [2021-07-15 20:47:37] 2021-07-16 00:46:41,486 | DEBUG | pilot.control.job | has_job_completed | ls -lF /var/lib/boinc-client/slots/36: [2021-07-15 20:47:37] [2021-07-15 20:47:37] 2021-07-16 00:46:41,486 | INFO | pilot.util.container | execute | executing command: ls -lF /var/lib/boinc-client/slots/36 [2021-07-15 20:47:37] 2021-07-16 00:46:41,537 | DEBUG | pilot.control.job | has_job_completed | total 50688 [2021-07-15 20:47:37] -rw------- 1 boinc boinc 570985 Jul 15 20:46 2b871aee-1a08-4e92-9566-0f5e5254fda6_74575.1.job.log [2021-07-15 20:47:37] -rw------- 1 boinc boinc 205660 Jul 15 20:46 2b871aee-1a08-4e92-9566-0f5e5254fda6_74575.1.job.log.tgz [2021-07-15 20:47:37] -rw------- 1 boinc boinc 130 Jul 15 18:12 9XJMDmfiOOzn7Olcko1bjSoqABFKDmABFKDmumdXDmz1FKDmvpaxMm.diag [2021-07-15 20:47:37] -rw------- 1 boinc boinc 1068205 Jul 15 18:14 agis_schedconf.cvmfs.json [2021-07-15 20:47:37] -rw-r--r-- 1 boinc boinc 0 Jul 15 18:12 boinc_lockfile [2021-07-15 20:47:37] -rw-r--r-- 1 boinc boinc 8192 Jul 15 20:46 boinc_mmap_file [2021-07-15 20:47:37] -rw-r--r-- 1 boinc boinc 535 Jul 15 20:45 boinc_task_state.xml [2021-07-15 20:47:37] -rw------- 1 boinc boinc 1967101 Jul 15 18:14 cric_ddmendpoints.json [2021-07-15 20:47:37] -rw-r--r-- 1 boinc boinc 38971704 Jul 15 18:12 EVNT.04972714._000035.pool.root.1 [2021-07-15 20:47:37] -rw------- 1 boinc boinc 7101 Jul 15 20:46 heartbeat.json [2021-07-15 20:47:37] -rw-r--r-- 1 boinc boinc 6188 Jul 15 18:12 init_data.xml [2021-07-15 20:47:37] -rw-r--r-- 1 boinc boinc 344159 Jul 15 18:12 input.tar.gz [2021-07-15 20:47:37] -rw-r--r-- 1 boinc boinc 112 Jul 15 18:12 job.xml [2021-07-15 20:47:37] -rw------- 1 boinc boinc 1019 Jul 15 20:46 memory_monitor_summary.json [2021-07-15 20:47:37] -rw------- 1 boinc boinc 7718383 Jul 15 20:44 output.1.2b871aee-1a08-4e92-9566-0f5e5254fda6_74575.pool.root [2021-07-15 20:47:37] -rw------- 1 boinc boinc 536 Jul 15 20:46 output.list [2021-07-15 20:47:37] -rw-r--r-- 1 boinc boinc 2655 Jul 15 18:12 pandaJob.out [2021-07-15 20:47:37] drwxrwx--- 2 boinc boinc 4096 Jul 15 20:46 PanDA_Pilot-5121347889/ [2021-07-15 20:47:37] drwx------ 4 boinc boinc 4096 Jul 15 18:14 pilot2/ [2021-07-15 20:47:37] -rw-r--r-- 1 boinc boinc 334707 Jul 15 17:28 pilot2.tar.gz [2021-07-15 20:47:37] -rw------- 1 boinc boinc 552014 Jul 15 20:46 pilotlog.txt [2021-07-15 20:47:37] -rw-r--r-- 1 boinc boinc 4534 Jul 15 18:07 queuedata.json [2021-07-15 20:47:37] -rwxr-xr-x 1 boinc boinc 6966 Jul 15 18:12 run_atlas* [2021-07-15 20:47:37] -rwx------ 1 boinc boinc 20591 Jul 15 18:09 runpilot2-wrapper.sh* [2021-07-15 20:47:37] -rw-r--r-- 1 boinc boinc 407 Jul 15 18:12 runtime_log [2021-07-15 20:47:37] -rw-r--r-- 1 boinc boinc 5574 Jul 15 18:12 runtime_log.err [2021-07-15 20:47:37] drwxrwx--x 2 boinc boinc 4096 Jul 15 18:12 shared/ [2021-07-15 20:47:37] -rw-r--r-- 1 boinc boinc 16551 Jul 15 18:12 start_atlas.sh [2021-07-15 20:47:37] -rw-r--r-- 1 boinc boinc 2208 Jul 15 18:12 stderr.txt [2021-07-15 20:47:37] -rw-r--r-- 1 boinc boinc 107 Jul 15 18:12 wrapper_26015_x86_64-pc-linux-gnu [2021-07-15 20:47:37] -rw-r--r-- 1 boinc boinc 26 Jul 15 20:46 wrapper_checkpoint.txt [2021-07-15 20:47:37] 2021-07-16 00:46:41,537 | INFO | pilot.util.queuehandling | queue_report | queue jobs has 0 job(s) [2021-07-15 20:47:37] 2021-07-16 00:46:41,537 | INFO | pilot.util.queuehandling | queue_report | queue payloads has 0 job(s) [2021-07-15 20:47:37] 2021-07-16 00:46:41,538 | INFO | pilot.util.queuehandling | queue_report | queue data_in has 0 job(s) [2021-07-15 20:47:37] 2021-07-16 00:46:41,538 | INFO | pilot.util.queuehandling | queue_report | queue data_out has 0 job(s) [2021-07-15 20:47:37] 2021-07-16 00:46:41,538 | INFO | pilot.util.queuehandling | queue_report | queue current_data_in has 0 job(s) [2021-07-15 20:47:37] 2021-07-16 00:46:41,538 | INFO | pilot.util.queuehandling | queue_report | queue validated_jobs has 0 job(s) [2021-07-15 20:47:37] 2021-07-16 00:46:41,538 | INFO | pilot.util.queuehandling | queue_report | queue validated_payloads has 0 job(s) [2021-07-15 20:47:37] 2021-07-16 00:46:41,538 | INFO | pilot.util.queuehandling | queue_report | queue monitored_payloads has 0 job(s) [2021-07-15 20:47:37] 2021-07-16 00:46:41,538 | INFO | pilot.util.queuehandling | queue_report | queue finished_jobs has 0 job(s) [2021-07-15 20:47:37] 2021-07-16 00:46:41,538 | INFO | pilot.util.queuehandling | queue_report | queue finished_payloads has 0 job(s) [2021-07-15 20:47:37] 2021-07-16 00:46:41,538 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_in has 1 job(s) [2021-07-15 20:47:37] 2021-07-16 00:46:41,538 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_out has 0 job(s) [2021-07-15 20:47:37] 2021-07-16 00:46:41,538 | INFO | pilot.util.queuehandling | queue_report | queue failed_jobs has 0 job(s) [2021-07-15 20:47:37] 2021-07-16 00:46:41,538 | INFO | pilot.util.queuehandling | queue_report | queue failed_payloads has 0 job(s) [2021-07-15 20:47:37] 2021-07-16 00:46:41,538 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_in has 0 job(s) [2021-07-15 20:47:37] 2021-07-16 00:46:41,539 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_out has 0 job(s) [2021-07-15 20:47:37] 2021-07-16 00:46:41,539 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobs has 0 job(s) [2021-07-15 20:47:37] 2021-07-16 00:46:41,539 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s) [2021-07-15 20:47:37] 2021-07-16 00:46:41,539 | INFO | pilot.control.job | has_job_completed | job 5121347889 has completed (purged errors) [2021-07-15 20:47:37] 2021-07-16 00:46:41,539 | INFO | pilot.util.processes | cleanup | overall cleanup function is called [2021-07-15 20:47:37] 2021-07-16 00:46:41,541 | DEBUG | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc-client/slots/36/PanDA_Pilot-5121347889 [2021-07-15 20:47:37] 2021-07-16 00:46:41,740 | INFO | pilot.control.monitor | control | 9147 s have passed since pilot start [2021-07-15 20:47:37] 2021-07-16 00:46:42,544 | INFO | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [154749] [2021-07-15 20:47:37] 2021-07-16 00:46:42,545 | INFO | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 154749 [2021-07-15 20:47:37] 2021-07-16 00:46:42,545 | INFO | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes [2021-07-15 20:47:37] 2021-07-16 00:46:43,548 | INFO | pilot.util.processes | cleanup | collected zombie processes [2021-07-15 20:47:37] 2021-07-16 00:46:43,548 | INFO | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=154749 [2021-07-15 20:47:37] 2021-07-16 00:46:43,738 | INFO | pilot.util.processes | kill_processes | process IDs to be killed: [154749] (in reverse order) [2021-07-15 20:47:37] 2021-07-16 00:46:43,871 | WARNING | pilot.util.processes | kill_processes | found no corresponding commands to process id(s) [2021-07-15 20:47:37] 2021-07-16 00:46:43,871 | INFO | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs [2021-07-15 20:47:37] 2021-07-16 00:46:43,871 | DEBUG | pilot.util.queuehandling | purge_queue | queue purged [2021-07-15 20:47:37] 2021-07-16 00:46:43,871 | INFO | pilot.control.job | retrieve | ready for new job [2021-07-15 20:47:37] 2021-07-16 00:46:43,872 | INFO | root | retrieve | pilot has finished for previous job - re-establishing logging [2021-07-15 20:47:37] 2021-07-16 00:46:43,873 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2021-07-15 20:47:37] 2021-07-16 00:46:43,873 | INFO | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 2.12.2 (1) *** [2021-07-15 20:47:37] 2021-07-16 00:46:43,873 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2021-07-15 20:47:37] 2021-07-16 00:46:43,873 | INFO | pilot.util.auxiliary | pilot_version_banner | [2021-07-15 20:47:37] 2021-07-16 00:46:43,898 | INFO | pilot.util.auxiliary | display_architecture_info | architecture information: [2021-07-15 20:47:37] 2021-07-16 00:46:44,135 | INFO | pilot.util.auxiliary | display_architecture_info | [2021-07-15 20:47:37] LSB Version: :core-4.1-amd64:core-4.1-noarch [2021-07-15 20:47:37] Distributor ID: CentOS [2021-07-15 20:47:37] Description: CentOS Linux release 7.8.2003 (Core) [2021-07-15 20:47:37] Release: 7.8.2003 [2021-07-15 20:47:37] Codename: Core [2021-07-15 20:47:37] 2021-07-16 00:46:44,135 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2021-07-15 20:47:37] 2021-07-16 00:46:44,636 | DEBUG | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc-client/slots/36 [2021-07-15 20:47:37] 2021-07-16 00:46:44,669 | INFO | pilot.util.monitoring | check_local_space | sufficient remaining disk space (57521733632 B) [2021-07-15 20:47:37] 2021-07-16 00:46:44,670 | WARNING | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job [2021-07-15 20:47:37] 2021-07-16 00:46:44,670 | DEBUG | pilot.control.job | retrieve | will not set job_aborted yet [2021-07-15 20:47:37] 2021-07-16 00:46:44,671 | DEBUG | pilot.control.job | retrieve | [job] retrieve thread has finished [2021-07-15 20:47:37] 2021-07-16 00:46:44,748 | DEBUG | pilot.control.job | control | job control ending since graceful_stop has been set [2021-07-15 20:47:37] 2021-07-16 00:46:44,749 | INFO | pilot.control.monitor | control | [monitor] control thread has ended [2021-07-15 20:47:37] 2021-07-16 00:46:44,749 | DEBUG | pilot.control.job | control | will not set job_aborted yet [2021-07-15 20:47:37] 2021-07-16 00:46:44,749 | DEBUG | pilot.control.job | control | [job] control thread has finished [2021-07-15 20:47:37] 2021-07-16 00:46:44,804 | DEBUG | pilot.control.data | copytool_in | will not set job_aborted yet [2021-07-15 20:47:37] 2021-07-16 00:46:44,805 | DEBUG | pilot.control.data | copytool_in | [data] copytool_in thread has finished [2021-07-15 20:47:37] 2021-07-16 00:46:44,869 | DEBUG | pilot.control.payload | failed_post | will not set job_aborted yet [2021-07-15 20:47:37] 2021-07-16 00:46:44,870 | INFO | pilot.control.payload | failed_post | [payload] failed_post thread has finished [2021-07-15 20:47:37] 2021-07-16 00:46:44,991 | WARNING | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration [2021-07-15 20:47:37] 2021-07-16 00:46:45,028 | WARNING | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration [2021-07-15 20:47:37] 2021-07-16 00:46:45,211 | DEBUG | pilot.control.payload | execute_payloads | will not set job_aborted yet [2021-07-15 20:47:37] 2021-07-16 00:46:45,212 | INFO | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished [2021-07-15 20:47:37] 2021-07-16 00:46:45,472 | DEBUG | pilot.control.payload | control | payload control ending since graceful_stop has been set [2021-07-15 20:47:37] 2021-07-16 00:46:45,473 | DEBUG | pilot.control.payload | control | will not set job_aborted yet [2021-07-15 20:47:37] 2021-07-16 00:46:45,473 | DEBUG | pilot.control.payload | control | [payload] control thread has finished [2021-07-15 20:47:37] 2021-07-16 00:46:45,497 | DEBUG | pilot.control.data | control | data control ending since graceful_stop has been set [2021-07-15 20:47:37] 2021-07-16 00:46:45,497 | DEBUG | pilot.control.data | control | will not set job_aborted yet [2021-07-15 20:47:37] 2021-07-16 00:46:45,498 | DEBUG | pilot.control.data | control | [data] control thread has finished [2021-07-15 20:47:37] 2021-07-16 00:46:45,636 | DEBUG | pilot.control.job | create_data_payload | will not set job_aborted yet [2021-07-15 20:47:37] 2021-07-16 00:46:45,636 | DEBUG | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished [2021-07-15 20:47:37] 2021-07-16 00:46:45,993 | DEBUG | pilot.control.data | copytool_out | will not set job_aborted yet [2021-07-15 20:47:37] 2021-07-16 00:46:45,993 | DEBUG | pilot.control.data | copytool_out | [data] copytool_out thread has finished [2021-07-15 20:47:37] 2021-07-16 00:46:46,073 | DEBUG | pilot.control.payload | validate_pre | will not set job_aborted yet [2021-07-15 20:47:37] 2021-07-16 00:46:46,073 | INFO | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished [2021-07-15 20:47:37] 2021-07-16 00:46:46,074 | DEBUG | pilot.control.job | validate | will not set job_aborted yet [2021-07-15 20:47:37] 2021-07-16 00:46:46,075 | DEBUG | pilot.control.job | validate | [job] validate thread has finished [2021-07-15 20:47:37] 2021-07-16 00:46:46,096 | DEBUG | pilot.control.payload | validate_post | will not set job_aborted yet [2021-07-15 20:47:37] 2021-07-16 00:46:46,096 | INFO | pilot.control.payload | validate_post | [payload] validate_post thread has finished [2021-07-15 20:47:37] 2021-07-16 00:46:46,488 | WARNING | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration [2021-07-15 20:47:37] 2021-07-16 00:46:46,489 | DEBUG | pilot.control.job | queue_monitor | will not set job_aborted yet [2021-07-15 20:47:37] 2021-07-16 00:46:46,489 | DEBUG | pilot.control.job | queue_monitor | [job] queue monitor thread has finished [2021-07-15 20:47:37] 2021-07-16 00:46:48,031 | DEBUG | pilot.control.data | queue_monitoring | will not set job_aborted yet [2021-07-15 20:47:37] 2021-07-16 00:46:48,033 | DEBUG | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished [2021-07-15 20:47:37] 2021-07-16 00:47:36,460 | WARNING | pilot.control.job | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 62 s) [2021-07-15 20:47:37] 2021-07-16 00:47:36,461 | DEBUG | pilot.util.processes | threads_aborted | aborting since the last relevant thread is about to finish [2021-07-15 20:47:37] 2021-07-16 00:47:36,462 | DEBUG | pilot.control.job | job_monitor | will proceed to set job_aborted [2021-07-15 20:47:37] 2021-07-16 00:47:36,462 | DEBUG | pilot.control.job | job_monitor | [job] job monitor thread has finished [2021-07-15 20:47:37] 2021-07-16 00:47:37,022 | INFO | pilot.workflow.generic | run | end of generic workflow (traces error code: 0) [2021-07-15 20:47:37] 2021-07-16 00:47:37,023 | INFO | root | wrap_up | traces error code: 0 [2021-07-15 20:47:37] 2021-07-16 00:47:37,023 | INFO | root | wrap_up | pilot has finished [2021-07-15 20:47:37] 2021-07-16 00:47:37,127 [wrapper] ==== pilot stdout END ==== [2021-07-15 20:47:37] 2021-07-16 00:47:37,141 [wrapper] ==== wrapper stdout RESUME ==== [2021-07-15 20:47:37] 2021-07-16 00:47:37,161 [wrapper] Pilot exit status: 0 [2021-07-15 20:47:37] 2021-07-16 00:47:37,272 [wrapper] pandaids: 5121347889 [2021-07-15 20:47:37] 2021-07-16 00:47:37,337 [wrapper] apfmon messages muted [2021-07-15 20:47:37] 2021-07-16 00:47:37,373 [wrapper] Test setup, not cleaning [2021-07-15 20:47:37] 2021-07-16 00:47:37,391 [wrapper] ==== wrapper stdout END ==== [2021-07-15 20:47:37] 2021-07-16 00:47:37,402 [wrapper] ==== wrapper stderr END ==== [2021-07-15 20:47:37] 2021-07-16 00:47:37,426 [wrapper] wrapperexiting ec=0, duration=9287 [2021-07-15 20:47:37] 2021-07-16 00:47:37,438 [wrapper] apfmon messages muted [2021-07-15 20:47:37] *** Error codes and diagnostics *** [2021-07-15 20:47:37] "exeErrorCode": 0, [2021-07-15 20:47:37] "exeErrorDiag": "", [2021-07-15 20:47:37] "pilotErrorCode": 0, [2021-07-15 20:47:37] "pilotErrorDiag": "", [2021-07-15 20:47:37] *** Listing of results directory *** [2021-07-15 20:47:38] total 58528 [2021-07-15 20:47:38] -rw-r--r-- 1 boinc boinc 334707 Jul 15 17:28 pilot2.tar.gz [2021-07-15 20:47:38] -rw-r--r-- 1 boinc boinc 4534 Jul 15 18:07 queuedata.json [2021-07-15 20:47:38] -rwx------ 1 boinc boinc 20591 Jul 15 18:09 runpilot2-wrapper.sh [2021-07-15 20:47:38] -rw-r--r-- 1 boinc boinc 107 Jul 15 18:12 wrapper_26015_x86_64-pc-linux-gnu [2021-07-15 20:47:38] -rwxr-xr-x 1 boinc boinc 6966 Jul 15 18:12 run_atlas [2021-07-15 20:47:38] -rw-r--r-- 1 boinc boinc 112 Jul 15 18:12 job.xml [2021-07-15 20:47:38] -rw-r--r-- 1 boinc boinc 6188 Jul 15 18:12 init_data.xml [2021-07-15 20:47:38] drwxrwx--x 2 boinc boinc 4096 Jul 15 18:12 shared [2021-07-15 20:47:38] -rw-r--r-- 1 boinc boinc 0 Jul 15 18:12 boinc_lockfile [2021-07-15 20:47:38] -rw-r--r-- 1 boinc boinc 38971704 Jul 15 18:12 EVNT.04972714._000035.pool.root.1 [2021-07-15 20:47:38] -rw-r--r-- 1 boinc boinc 16551 Jul 15 18:12 start_atlas.sh [2021-07-15 20:47:38] -rw-r--r-- 1 boinc boinc 344159 Jul 15 18:12 input.tar.gz [2021-07-15 20:47:38] -rw-r--r-- 1 boinc boinc 2655 Jul 15 18:12 pandaJob.out [2021-07-15 20:47:38] -rw------- 1 boinc boinc 1068205 Jul 15 18:14 agis_schedconf.cvmfs.json [2021-07-15 20:47:38] -rw------- 1 boinc boinc 1967101 Jul 15 18:14 cric_ddmendpoints.json [2021-07-15 20:47:38] drwx------ 4 boinc boinc 4096 Jul 15 18:14 pilot2 [2021-07-15 20:47:38] -rw------- 1 boinc boinc 7718383 Jul 15 20:44 output.1.2b871aee-1a08-4e92-9566-0f5e5254fda6_74575.pool.root [2021-07-15 20:47:38] -rw-r--r-- 1 boinc boinc 535 Jul 15 20:45 boinc_task_state.xml [2021-07-15 20:47:38] -rw------- 1 boinc boinc 1019 Jul 15 20:46 memory_monitor_summary.json [2021-07-15 20:47:38] -rw------- 1 boinc boinc 205660 Jul 15 20:46 2b871aee-1a08-4e92-9566-0f5e5254fda6_74575.1.job.log.tgz [2021-07-15 20:47:38] -rw------- 1 boinc boinc 7101 Jul 15 20:46 heartbeat.json [2021-07-15 20:47:38] -rw-r--r-- 1 boinc boinc 8192 Jul 15 20:47 boinc_mmap_file [2021-07-15 20:47:38] -rw-r--r-- 1 boinc boinc 26 Jul 15 20:47 wrapper_checkpoint.txt [2021-07-15 20:47:38] -rw------- 1 boinc boinc 7363 Jul 15 20:47 pilotlog.txt [2021-07-15 20:47:38] -rw------- 1 boinc boinc 585797 Jul 15 20:47 2b871aee-1a08-4e92-9566-0f5e5254fda6_74575.1.job.log [2021-07-15 20:47:38] -rw------- 1 boinc boinc 536 Jul 15 20:47 output.list [2021-07-15 20:47:38] -rw-r--r-- 1 boinc boinc 9429 Jul 15 20:47 runtime_log.err [2021-07-15 20:47:38] -rw-r--r-- 1 boinc boinc 748 Jul 15 20:47 runtime_log [2021-07-15 20:47:38] -rw------- 1 boinc boinc 8529920 Jul 15 20:47 result.tar.gz [2021-07-15 20:47:38] -rw------- 1 boinc boinc 565 Jul 15 20:47 9XJMDmfiOOzn7Olcko1bjSoqABFKDmABFKDmumdXDmz1FKDmvpaxMm.diag [2021-07-15 20:47:38] -rw-r--r-- 1 boinc boinc 30490 Jul 15 20:47 stderr.txt [2021-07-15 20:47:38] HITS file was successfully produced: [2021-07-15 20:47:38] -rw------- 1 boinc boinc 7718383 Jul 15 20:44 shared/HITS.pool.root.1 [2021-07-15 20:47:38] *** Contents of shared directory: *** [2021-07-15 20:47:38] total 54292 [2021-07-15 20:47:38] -rw-r--r-- 1 boinc boinc 38971704 Jul 15 18:12 ATLAS.root_0 [2021-07-15 20:47:38] -rw-r--r-- 1 boinc boinc 16551 Jul 15 18:12 start_atlas.sh [2021-07-15 20:47:38] -rw-r--r-- 1 boinc boinc 344159 Jul 15 18:12 input.tar.gz [2021-07-15 20:47:38] -rw------- 1 boinc boinc 7718383 Jul 15 20:44 HITS.pool.root.1 [2021-07-15 20:47:38] -rw------- 1 boinc boinc 8529920 Jul 15 20:47 result.tar.gz 20:47:39 (136231): run_atlas exited; CPU time 5180.948576 20:47:39 (136231): called boinc_finish(0) </stderr_txt> ]]>
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