Name BCXMDmwMROzn7Olcko1bjSoqABFKDmABFKDmumdXDmG2FKDmUixeVn_0
Workunit 2104915
Created 16 Jul 2021, 0:58:53 UTC
Sent 16 Jul 2021, 1:02:38 UTC
Report deadline 23 Jul 2021, 1:02:38 UTC
Received 16 Jul 2021, 2:27:52 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4357
Run time 23 min 51 sec
CPU time 8 min 20 sec
Validate state Valid
Credit 5.26
Device peak FLOPS 3.04 GFLOPS
Application version ATLAS Simulation v1.04 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 2.57 GB
Peak swap size 30.45 GB
Peak disk usage 79.87 MB

Stderr output

<core_client_version>7.9.3</core_client_version>
<![CDATA[
<stderr_txt>
21:03:23 (2359): wrapper (7.7.26015): starting
21:03:23 (2359): wrapper: running run_atlas (--nthreads 1)
[2021-07-15 21:03:23] Arguments: --nthreads 1
[2021-07-15 21:03:23] Threads: 1
[2021-07-15 21:03:23] Checking for CVMFS
[2021-07-15 21:03:28] Probing /cvmfs/atlas.cern.ch... OK
[2021-07-15 21:03:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2021-07-15 21:03:29] Running cvmfs_config stat atlas.cern.ch
[2021-07-15 21:03:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2021-07-15 21:03:30] 2.9.0.0 2832 0 24552 88449 3 1 3739972 4194304 0 130560 0 0 0.000 529 1097 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 0
[2021-07-15 21:03:30] CVMFS is ok
[2021-07-15 21:03:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2021-07-15 21:03:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2021-07-15 21:03:30] Small home clusters do not require a local http proxy but it is suggested if
[2021-07-15 21:03:30] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2021-07-15 21:03:30] Further information can be found at the LHC@home message board.
[2021-07-15 21:03:30] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2021-07-15 21:03:30] Checking for singularity binary...
[2021-07-15 21:03:30] Using singularity found in PATH at /usr/local/bin/singularity
[2021-07-15 21:03:30] Running /usr/local/bin/singularity --version
[2021-07-15 21:03:31] singularity version 3.7.2+10-ga969f0f8c
[2021-07-15 21:03:31] Checking singularity works with /usr/local/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2021-07-15 21:03:32] E5-2670
[2021-07-15 21:03:32] Singularity works
[2021-07-15 21:03:32] Starting ATLAS job with PandaID=5121469486
[2021-07-15 21:03:32] Running command: /usr/local/bin/singularity exec --pwd /var/lib/boinc-client/slots/33 -B /cvmfs,/var /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2021-07-15 21:27:12]  *** The last 200 lines of the pilot log: ***
[2021-07-15 21:27:12]       }, 
[2021-07-15 21:27:12]       "transformSetup": {
[2021-07-15 21:27:12]         "cpuTime": 0.0, 
[2021-07-15 21:27:12]         "wallTime": 0.03
[2021-07-15 21:27:12]       }, 
[2021-07-15 21:27:12]       "trfPredata": null, 
[2021-07-15 21:27:12]       "wallTime": 1200.75
[2021-07-15 21:27:12]     }
[2021-07-15 21:27:12]   }
[2021-07-15 21:27:12] }
[2021-07-15 21:27:12] 2021-07-16 01:27:00,874 | DEBUG    | pilot.user.atlas.common          | update_server             | no need to update logstash for this job
[2021-07-15 21:27:12] 2021-07-16 01:27:00,875 | INFO     | pilot.control.job                | send_state                | pilot will not update the server (heartbeat message will be written to file)
[2021-07-15 21:27:12] 2021-07-16 01:27:00,875 | INFO     | pilot.control.job                | send_state                | job 5121469486 has finished - writing final server update
[2021-07-15 21:27:12] 2021-07-16 01:27:00,875 | DEBUG    | pilot.user.atlas.jobmetrics      | get_job_metrics_string    | job definition core count: 1
[2021-07-15 21:27:12] 2021-07-16 01:27:00,876 | INFO     | pilot.user.atlas.jobmetrics      | get_job_metrics_string    | will not add max space = -37396044 B to job metrics
[2021-07-15 21:27:12] 2021-07-16 01:27:00,877 | DEBUG    | pilot.api.analytics              | get_fitted_data           | removing tails from data to be fitted
[2021-07-15 21:27:12] 2021-07-16 01:27:00,877 | INFO     | pilot.api.analytics              | get_fitted_data           | fitting pss+swap vs Time
[2021-07-15 21:27:12] 2021-07-16 01:27:00,878 | INFO     | pilot.api.analytics              | get_fitted_data           | current memory leak: 2114.28 B/s (using 14 data points, chi2=1447950)
[2021-07-15 21:27:12] 2021-07-16 01:27:00,879 | DEBUG    | pilot.user.atlas.jobmetrics      | get_job_metrics           | job metrics="actualCoreCount=5 nEvents=2 dbTime=216.84 dbData=4274899 leak=2114.28 chi2=1447950 even
[2021-07-15 21:27:12] 2021-07-16 01:27:00,880 | INFO     | pilot.control.job                | get_data_structure        | mean actualcorecount: 4.411765
[2021-07-15 21:27:12] 2021-07-16 01:27:00,880 | INFO     | pilot.control.job                | get_data_structure        | total number of processed events: 2 (read)
[2021-07-15 21:27:12] 2021-07-16 01:27:00,902 | INFO     | pilot.util.container             | execute                   | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2021-07-15 21:27:12] 2021-07-16 01:27:01,003 | INFO     | pilot.user.atlas.utilities       | get_memory_values         | using path: /var/lib/boinc-client/slots/33/PanDA_Pilot-5121469486/memory_monitor_summary.json (trf n
[2021-07-15 21:27:12] 2021-07-16 01:27:01,006 | DEBUG    | pilot.user.atlas.utilities       | get_memory_monitor_info   | summary_dictionary={'Avg': {'nprocs': 4.809, 'nthreads': 5.666, 'pss': 1159465.0, 'rchar': 420926.0,
[2021-07-15 21:27:12] 2021-07-16 01:27:01,007 | INFO     | pilot.user.atlas.utilities       | get_memory_monitor_info   | extracted standard info from prmon json
[2021-07-15 21:27:12] 2021-07-16 01:27:01,007 | INFO     | pilot.user.atlas.utilities       | get_memory_monitor_info   | extracted standard memory fields from prmon json
[2021-07-15 21:27:12] 2021-07-16 01:27:01,007 | INFO     | pilot.util.timing                | timing_report             | ..............................
[2021-07-15 21:27:12] 2021-07-16 01:27:01,008 | INFO     | pilot.util.timing                | timing_report             | . Timing measurements:
[2021-07-15 21:27:12] 2021-07-16 01:27:01,008 | INFO     | pilot.util.timing                | timing_report             | . get job = 0 s
[2021-07-15 21:27:12] 2021-07-16 01:27:01,008 | INFO     | pilot.util.timing                | timing_report             | . initial setup = 1 s
[2021-07-15 21:27:12] 2021-07-16 01:27:01,008 | INFO     | pilot.util.timing                | timing_report             | . payload setup = 41 s
[2021-07-15 21:27:12] 2021-07-16 01:27:01,008 | INFO     | pilot.util.timing                | timing_report             | . total setup = 42 s
[2021-07-15 21:27:12] 2021-07-16 01:27:01,009 | INFO     | pilot.util.timing                | timing_report             | . stage-in = 0 s
[2021-07-15 21:27:12] 2021-07-16 01:27:01,009 | INFO     | pilot.util.timing                | timing_report             | . payload execution = 1267 s
[2021-07-15 21:27:12] 2021-07-16 01:27:01,009 | INFO     | pilot.util.timing                | timing_report             | . stage-out = 1 s
[2021-07-15 21:27:12] 2021-07-16 01:27:01,009 | INFO     | pilot.util.timing                | timing_report             | ..............................
[2021-07-15 21:27:12] 2021-07-16 01:27:01,010 | DEBUG    | pilot.control.job                | send_state                | is_harvester_mode(args) : False
[2021-07-15 21:27:12] 2021-07-16 01:27:01,012 | DEBUG    | pilot.control.job                | write_heartbeat_to_file   | heartbeat dictionary: {'jobId': '5121469486', 'state': 'finished', 'timestamp': '2021-07-15T21:27:00
[2021-07-15 21:27:12] 2021-07-16 01:27:01,013 | DEBUG    | pilot.control.job                | write_heartbeat_to_file   | wrote heartbeat to file /var/lib/boinc-client/slots/33/heartbeat.json
[2021-07-15 21:27:12] 2021-07-16 01:27:01,013 | DEBUG    | pilot.control.job                | queue_monitor             | job 5121469486 was dequeued from the monitored payloads queue
[2021-07-15 21:27:12] 2021-07-16 01:27:01,192 | DEBUG    | pilot.control.job                | queue_monitor             | tmp job object deleted
[2021-07-15 21:27:12] 2021-07-16 01:27:01,566 | INFO     | pilot.control.job                | make_job_report           | 
[2021-07-15 21:27:12] 2021-07-16 01:27:01,567 | INFO     | pilot.control.job                | make_job_report           | job summary report
[2021-07-15 21:27:12] 2021-07-16 01:27:01,567 | INFO     | pilot.control.job                | make_job_report           | --------------------------------------------------
[2021-07-15 21:27:12] 2021-07-16 01:27:01,567 | INFO     | pilot.control.job                | make_job_report           | PanDA job id: 5121469486
[2021-07-15 21:27:12] 2021-07-16 01:27:01,567 | INFO     | pilot.control.job                | make_job_report           | task id: NULL
[2021-07-15 21:27:12] 2021-07-16 01:27:01,568 | INFO     | pilot.control.job                | make_job_report           | errors: (none)
[2021-07-15 21:27:12] 2021-07-16 01:27:01,568 | INFO     | pilot.control.job                | make_job_report           | status: LOG_TRANSFER = DONE 
[2021-07-15 21:27:12] 2021-07-16 01:27:01,568 | INFO     | pilot.control.job                | make_job_report           | pilot state: finished 
[2021-07-15 21:27:12] 2021-07-16 01:27:01,568 | INFO     | pilot.control.job                | make_job_report           | transexitcode: 0
[2021-07-15 21:27:12] 2021-07-16 01:27:01,568 | INFO     | pilot.control.job                | make_job_report           | exeerrorcode: 0
[2021-07-15 21:27:12] 2021-07-16 01:27:01,569 | INFO     | pilot.control.job                | make_job_report           | exeerrordiag: 
[2021-07-15 21:27:12] 2021-07-16 01:27:01,569 | INFO     | pilot.control.job                | make_job_report           | exitcode: 0
[2021-07-15 21:27:12] 2021-07-16 01:27:01,569 | INFO     | pilot.control.job                | make_job_report           | exitmsg: OK
[2021-07-15 21:27:12] 2021-07-16 01:27:01,569 | INFO     | pilot.control.job                | make_job_report           | cpuconsumptiontime: 563 s
[2021-07-15 21:27:12] 2021-07-16 01:27:01,569 | INFO     | pilot.control.job                | make_job_report           | nevents: 2
[2021-07-15 21:27:12] 2021-07-16 01:27:01,569 | INFO     | pilot.control.job                | make_job_report           | neventsw: 0
[2021-07-15 21:27:12] 2021-07-16 01:27:01,569 | INFO     | pilot.control.job                | make_job_report           | pid: 17385
[2021-07-15 21:27:12] 2021-07-16 01:27:01,570 | INFO     | pilot.control.job                | make_job_report           | pgrp: 17385
[2021-07-15 21:27:12] 2021-07-16 01:27:01,570 | INFO     | pilot.control.job                | make_job_report           | corecount: 1
[2021-07-15 21:27:12] 2021-07-16 01:27:01,570 | INFO     | pilot.control.job                | make_job_report           | event service: False
[2021-07-15 21:27:12] 2021-07-16 01:27:01,570 | INFO     | pilot.control.job                | make_job_report           | sizes: {24130594: 3866122, 24130595: 3866287, 24131909: 3888509, 24131910: 3897979, 24131912: 389803
[2021-07-15 21:27:12] 2021-07-16 01:27:01,570 | INFO     | pilot.control.job                | make_job_report           | --------------------------------------------------
[2021-07-15 21:27:12] 2021-07-16 01:27:01,570 | INFO     | pilot.control.job                | make_job_report           | 
[2021-07-15 21:27:12] 2021-07-16 01:27:01,570 | DEBUG    | pilot.control.job                | has_job_completed         | ls -lF /var/lib/boinc-client/slots/33:
[2021-07-15 21:27:12] 
[2021-07-15 21:27:12] 2021-07-16 01:27:01,571 | INFO     | pilot.util.container             | execute                   | executing command: ls -lF /var/lib/boinc-client/slots/33
[2021-07-15 21:27:12] 2021-07-16 01:27:01,647 | DEBUG    | pilot.control.job                | has_job_completed         | total 43488
[2021-07-15 21:27:12] -rw------- 1 boinc boinc   168748 Jul 15 21:27 235a5807-c358-4df5-8b8c-fe7530090292_58198.1.job.log
[2021-07-15 21:27:12] -rw------- 1 boinc boinc   187980 Jul 15 21:26 235a5807-c358-4df5-8b8c-fe7530090292_58198.1.job.log.tgz
[2021-07-15 21:27:12] -rw------- 1 boinc boinc  1068229 Jul 15 21:04 agis_schedconf.cvmfs.json
[2021-07-15 21:27:12] -rw------- 1 boinc boinc      130 Jul 15 21:03 BCXMDmwMROzn7Olcko1bjSoqABFKDmABFKDmumdXDmG2FKDmUixeVn.diag
[2021-07-15 21:27:12] -rw-r--r-- 1 boinc boinc        0 Jul 15 21:03 boinc_lockfile
[2021-07-15 21:27:12] -rw-r--r-- 1 boinc boinc     8192 Jul 15 21:27 boinc_mmap_file
[2021-07-15 21:27:12] -rw-r--r-- 1 boinc boinc      534 Jul 15 21:26 boinc_task_state.xml
[2021-07-15 21:27:12] -rw------- 1 boinc boinc  1967101 Jul 15 21:04 cric_ddmendpoints.json
[2021-07-15 21:27:12] -rw-r--r-- 1 boinc boinc 38288972 Jul 15 21:03 EVNT.04972714._000032.pool.root.1
[2021-07-15 21:27:12] -rw------- 1 boinc boinc     7041 Jul 15 21:27 heartbeat.json
[2021-07-15 21:27:12] -rw-r--r-- 1 boinc boinc     6188 Jul 15 21:03 init_data.xml
[2021-07-15 21:27:12] -rw-r--r-- 1 boinc boinc   344154 Jul 15 21:03 input.tar.gz
[2021-07-15 21:27:12] -rw-r--r-- 1 boinc boinc      112 Jul 15 21:03 job.xml
[2021-07-15 21:27:12] -rw------- 1 boinc boinc     1011 Jul 15 21:26 memory_monitor_summary.json
[2021-07-15 21:27:12] -rw------- 1 boinc boinc  1854713 Jul 15 21:26 output.1.235a5807-c358-4df5-8b8c-fe7530090292_58198.pool.root
[2021-07-15 21:27:12] -rw------- 1 boinc boinc      536 Jul 15 21:26 output.list
[2021-07-15 21:27:12] -rw-r--r-- 1 boinc boinc     2617 Jul 15 21:03 pandaJob.out
[2021-07-15 21:27:12] drwxrwx--- 2 boinc boinc     4096 Jul 15 21:26 PanDA_Pilot-5121469486/
[2021-07-15 21:27:12] drwx------ 4 boinc boinc     4096 Jul 15 21:05 pilot2/
[2021-07-15 21:27:12] -rw-r--r-- 1 boinc boinc   334707 Jul 15 20:28 pilot2.tar.gz
[2021-07-15 21:27:12] -rw------- 1 boinc boinc   149778 Jul 15 21:27 pilotlog.txt
[2021-07-15 21:27:12] -rw-r--r-- 1 boinc boinc     3214 Jul 15 20:58 queuedata.json
[2021-07-15 21:27:12] -rwxr-xr-x 1 boinc boinc     6966 Jul 15 21:03 run_atlas*
[2021-07-15 21:27:12] -rwx------ 1 boinc boinc    20591 Jul 15 20:58 runpilot2-wrapper.sh*
[2021-07-15 21:27:12] -rw-r--r-- 1 boinc boinc      407 Jul 15 21:03 runtime_log
[2021-07-15 21:27:12] -rw-r--r-- 1 boinc boinc     5574 Jul 15 21:03 runtime_log.err
[2021-07-15 21:27:12] drwxrwx--x 2 boinc boinc     4096 Jul 15 21:03 shared/
[2021-07-15 21:27:12] -rw-r--r-- 1 boinc boinc    16551 Jul 15 21:03 start_atlas.sh
[2021-07-15 21:27:12] -rw-r--r-- 1 boinc boinc     2193 Jul 15 21:03 stderr.txt
[2021-07-15 21:27:12] -rw-r--r-- 1 boinc boinc      107 Jul 15 21:03 wrapper_26015_x86_64-pc-linux-gnu
[2021-07-15 21:27:12] -rw-r--r-- 1 boinc boinc       25 Jul 15 21:27 wrapper_checkpoint.txt
[2021-07-15 21:27:12] 2021-07-16 01:27:01,647 | INFO     | pilot.util.queuehandling         | queue_report              | queue jobs has 0 job(s)
[2021-07-15 21:27:12] 2021-07-16 01:27:01,648 | INFO     | pilot.util.queuehandling         | queue_report              | queue payloads has 0 job(s)
[2021-07-15 21:27:12] 2021-07-16 01:27:01,648 | INFO     | pilot.util.queuehandling         | queue_report              | queue data_in has 0 job(s)
[2021-07-15 21:27:12] 2021-07-16 01:27:01,648 | INFO     | pilot.util.queuehandling         | queue_report              | queue data_out has 0 job(s)
[2021-07-15 21:27:12] 2021-07-16 01:27:01,648 | INFO     | pilot.util.queuehandling         | queue_report              | queue current_data_in has 0 job(s)
[2021-07-15 21:27:12] 2021-07-16 01:27:01,648 | INFO     | pilot.util.queuehandling         | queue_report              | queue validated_jobs has 0 job(s)
[2021-07-15 21:27:12] 2021-07-16 01:27:01,648 | INFO     | pilot.util.queuehandling         | queue_report              | queue validated_payloads has 0 job(s)
[2021-07-15 21:27:12] 2021-07-16 01:27:01,648 | INFO     | pilot.util.queuehandling         | queue_report              | queue monitored_payloads has 0 job(s)
[2021-07-15 21:27:12] 2021-07-16 01:27:01,648 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_jobs has 0 job(s)
[2021-07-15 21:27:12] 2021-07-16 01:27:01,649 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_payloads has 0 job(s)
[2021-07-15 21:27:12] 2021-07-16 01:27:01,649 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_data_in has 1 job(s)
[2021-07-15 21:27:12] 2021-07-16 01:27:01,649 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_data_out has 0 job(s)
[2021-07-15 21:27:12] 2021-07-16 01:27:01,649 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_jobs has 0 job(s)
[2021-07-15 21:27:12] 2021-07-16 01:27:01,649 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_payloads has 0 job(s)
[2021-07-15 21:27:12] 2021-07-16 01:27:01,649 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_data_in has 0 job(s)
[2021-07-15 21:27:12] 2021-07-16 01:27:01,649 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_data_out has 0 job(s)
[2021-07-15 21:27:12] 2021-07-16 01:27:01,650 | INFO     | pilot.util.queuehandling         | queue_report              | queue completed_jobs has 0 job(s)
[2021-07-15 21:27:12] 2021-07-16 01:27:01,650 | INFO     | pilot.util.queuehandling         | queue_report              | queue completed_jobids has 1 job(s)
[2021-07-15 21:27:12] 2021-07-16 01:27:01,650 | INFO     | pilot.control.job                | has_job_completed         | job 5121469486 has completed (purged errors)
[2021-07-15 21:27:12] 2021-07-16 01:27:01,650 | INFO     | pilot.util.processes             | cleanup                   | overall cleanup function is called
[2021-07-15 21:27:12] 2021-07-16 01:27:01,657 | DEBUG    | pilot.util.processes             | cleanup                   | work directory was removed: /var/lib/boinc-client/slots/33/PanDA_Pilot-5121469486
[2021-07-15 21:27:12] 2021-07-16 01:27:02,660 | INFO     | pilot.info.jobdata               | collect_zombies           | --- collectZombieJob: --- 10, [17385]
[2021-07-15 21:27:12] 2021-07-16 01:27:02,661 | INFO     | pilot.info.jobdata               | collect_zombies           | zombie collector trying to kill pid 17385
[2021-07-15 21:27:12] 2021-07-16 01:27:02,661 | INFO     | pilot.info.jobdata               | collect_zombies           | harmless exception when collecting zombies: [Errno 10] No child processes
[2021-07-15 21:27:12] 2021-07-16 01:27:03,664 | INFO     | pilot.util.processes             | cleanup                   | collected zombie processes
[2021-07-15 21:27:12] 2021-07-16 01:27:03,665 | INFO     | pilot.util.processes             | cleanup                   | will now attempt to kill all subprocesses of pid=17385
[2021-07-15 21:27:12] 2021-07-16 01:27:03,825 | INFO     | pilot.util.processes             | kill_processes            | process IDs to be killed: [17385] (in reverse order)
[2021-07-15 21:27:12] 2021-07-16 01:27:03,946 | WARNING  | pilot.util.processes             | kill_processes            | found no corresponding commands to process id(s)
[2021-07-15 21:27:12] 2021-07-16 01:27:03,946 | INFO     | pilot.util.processes             | kill_orphans              | Do not look for orphan processes in BOINC jobs
[2021-07-15 21:27:12] 2021-07-16 01:27:03,946 | DEBUG    | pilot.util.queuehandling         | purge_queue               | queue purged
[2021-07-15 21:27:12] 2021-07-16 01:27:03,947 | INFO     | pilot.control.job                | retrieve                  | ready for new job
[2021-07-15 21:27:12] 2021-07-16 01:27:03,947 | INFO     | root                             | retrieve                  | pilot has finished for previous job - re-establishing logging
[2021-07-15 21:27:12] 2021-07-16 01:27:03,949 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ****************************************
[2021-07-15 21:27:12] 2021-07-16 01:27:03,949 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ***  PanDA Pilot version 2.12.2 (1)  ***
[2021-07-15 21:27:12] 2021-07-16 01:27:03,950 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ****************************************
[2021-07-15 21:27:12] 2021-07-16 01:27:03,950 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | 
[2021-07-15 21:27:12] 2021-07-16 01:27:03,970 | INFO     | pilot.util.auxiliary             | display_architecture_info | architecture information:
[2021-07-15 21:27:12] 2021-07-16 01:27:04,537 | INFO     | pilot.util.auxiliary             | display_architecture_info | 
[2021-07-15 21:27:12] LSB Version:	:core-4.1-amd64:core-4.1-noarch
[2021-07-15 21:27:12] Distributor ID:	CentOS
[2021-07-15 21:27:12] Description:	CentOS Linux release 7.8.2003 (Core)
[2021-07-15 21:27:12] Release:	7.8.2003
[2021-07-15 21:27:12] Codename:	Core
[2021-07-15 21:27:12] 2021-07-16 01:27:04,537 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ****************************************
[2021-07-15 21:27:12] 2021-07-16 01:27:05,040 | DEBUG    | pilot.util.monitoring            | check_local_space         | checking local space on /var/lib/boinc-client/slots/33
[2021-07-15 21:27:12] 2021-07-16 01:27:05,047 | WARNING  | pilot.control.job                | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 76 s)
[2021-07-15 21:27:12] 2021-07-16 01:27:05,106 | INFO     | pilot.util.monitoring            | check_local_space         | sufficient remaining disk space (53445918720 B)
[2021-07-15 21:27:12] 2021-07-16 01:27:05,107 | WARNING  | pilot.control.job                | proceed_with_getjob       | since timefloor is set to 0, pilot was only allowed to run one job
[2021-07-15 21:27:12] 2021-07-16 01:27:05,107 | DEBUG    | pilot.control.job                | retrieve                  | will not set job_aborted yet
[2021-07-15 21:27:12] 2021-07-16 01:27:05,108 | WARNING  | pilot.util.common                | should_abort              | data:queue_monitoring:received graceful stop - abort after this iteration
[2021-07-15 21:27:12] 2021-07-16 01:27:05,108 | WARNING  | pilot.control.monitor            | control                   | aborting monitor loop since graceful_stop has been set
[2021-07-15 21:27:12] 2021-07-16 01:27:05,108 | WARNING  | pilot.util.common                | should_abort              | data:copytool_out:received graceful stop - abort after this iteration
[2021-07-15 21:27:12] 2021-07-16 01:27:05,108 | DEBUG    | pilot.control.job                | retrieve                  | [job] retrieve thread has finished
[2021-07-15 21:27:12] 2021-07-16 01:27:05,109 | INFO     | pilot.control.monitor            | control                   | [monitor] control thread has ended
[2021-07-15 21:27:12] 2021-07-16 01:27:05,393 | DEBUG    | pilot.control.job                | create_data_payload       | will not set job_aborted yet
[2021-07-15 21:27:12] 2021-07-16 01:27:05,393 | DEBUG    | pilot.control.job                | create_data_payload       | [job] create_data_payload thread has finished
[2021-07-15 21:27:12] 2021-07-16 01:27:05,395 | DEBUG    | pilot.control.job                | validate                  | will not set job_aborted yet
[2021-07-15 21:27:12] 2021-07-16 01:27:05,396 | DEBUG    | pilot.control.job                | validate                  | [job] validate thread has finished
[2021-07-15 21:27:12] 2021-07-16 01:27:05,503 | DEBUG    | pilot.control.job                | control                   | job control ending since graceful_stop has been set
[2021-07-15 21:27:12] 2021-07-16 01:27:05,503 | DEBUG    | pilot.control.job                | control                   | will not set job_aborted yet
[2021-07-15 21:27:12] 2021-07-16 01:27:05,504 | DEBUG    | pilot.control.job                | control                   | [job] control thread has finished
[2021-07-15 21:27:12] 2021-07-16 01:27:05,551 | WARNING  | pilot.util.common                | should_abort              | job:job_monitor:received graceful stop - abort after this iteration
[2021-07-15 21:27:12] 2021-07-16 01:27:05,724 | DEBUG    | pilot.control.payload            | execute_payloads          | will not set job_aborted yet
[2021-07-15 21:27:12] 2021-07-16 01:27:05,725 | INFO     | pilot.control.payload            | execute_payloads          | [payload] execute_payloads thread has finished
[2021-07-15 21:27:12] 2021-07-16 01:27:05,797 | DEBUG    | pilot.control.data               | control                   | data control ending since graceful_stop has been set
[2021-07-15 21:27:12] 2021-07-16 01:27:05,797 | DEBUG    | pilot.control.data               | control                   | will not set job_aborted yet
[2021-07-15 21:27:12] 2021-07-16 01:27:05,797 | DEBUG    | pilot.control.data               | control                   | [data] control thread has finished
[2021-07-15 21:27:12] 2021-07-16 01:27:05,996 | DEBUG    | pilot.control.payload            | failed_post               | will not set job_aborted yet
[2021-07-15 21:27:12] 2021-07-16 01:27:05,997 | INFO     | pilot.control.payload            | failed_post               | [payload] failed_post thread has finished
[2021-07-15 21:27:12] 2021-07-16 01:27:06,040 | DEBUG    | pilot.control.payload            | validate_pre              | will not set job_aborted yet
[2021-07-15 21:27:12] 2021-07-16 01:27:06,041 | INFO     | pilot.control.payload            | validate_pre              | [payload] validate_pre thread has finished
[2021-07-15 21:27:12] 2021-07-16 01:27:06,109 | DEBUG    | pilot.control.data               | copytool_out              | will not set job_aborted yet
[2021-07-15 21:27:12] 2021-07-16 01:27:06,110 | DEBUG    | pilot.control.data               | copytool_out              | [data] copytool_out thread has finished
[2021-07-15 21:27:12] 2021-07-16 01:27:06,131 | DEBUG    | pilot.control.data               | copytool_in               | will not set job_aborted yet
[2021-07-15 21:27:12] 2021-07-16 01:27:06,132 | DEBUG    | pilot.control.data               | copytool_in               | [data] copytool_in thread has finished
[2021-07-15 21:27:12] 2021-07-16 01:27:06,200 | WARNING  | pilot.util.common                | should_abort              | job:queue_monitor:received graceful stop - abort after this iteration
[2021-07-15 21:27:12] 2021-07-16 01:27:06,201 | DEBUG    | pilot.control.job                | queue_monitor             | will not set job_aborted yet
[2021-07-15 21:27:12] 2021-07-16 01:27:06,201 | DEBUG    | pilot.control.job                | queue_monitor             | [job] queue monitor thread has finished
[2021-07-15 21:27:12] 2021-07-16 01:27:06,307 | DEBUG    | pilot.control.payload            | control                   | payload control ending since graceful_stop has been set
[2021-07-15 21:27:12] 2021-07-16 01:27:06,307 | DEBUG    | pilot.control.payload            | control                   | will not set job_aborted yet
[2021-07-15 21:27:12] 2021-07-16 01:27:06,307 | DEBUG    | pilot.control.payload            | control                   | [payload] control thread has finished
[2021-07-15 21:27:12] 2021-07-16 01:27:06,556 | DEBUG    | pilot.control.job                | job_monitor               | will not set job_aborted yet
[2021-07-15 21:27:12] 2021-07-16 01:27:06,557 | DEBUG    | pilot.control.job                | job_monitor               | [job] job monitor thread has finished
[2021-07-15 21:27:12] 2021-07-16 01:27:06,621 | DEBUG    | pilot.control.payload            | validate_post             | will not set job_aborted yet
[2021-07-15 21:27:12] 2021-07-16 01:27:06,623 | INFO     | pilot.control.payload            | validate_post             | [payload] validate_post thread has finished
[2021-07-15 21:27:12] 2021-07-16 01:27:08,114 | DEBUG    | pilot.util.processes             | threads_aborted           | aborting since the last relevant thread is about to finish
[2021-07-15 21:27:12] 2021-07-16 01:27:08,116 | DEBUG    | pilot.control.data               | queue_monitoring          | will proceed to set job_aborted
[2021-07-15 21:27:12] 2021-07-16 01:27:08,117 | DEBUG    | pilot.control.data               | queue_monitoring          | [data] queue_monitor thread has finished
[2021-07-15 21:27:12] 2021-07-16 01:27:09,109 | INFO     | pilot.workflow.generic           | run                       | end of generic workflow (traces error code: 0)
[2021-07-15 21:27:12] 2021-07-16 01:27:09,113 | INFO     | root                             | wrap_up                   | traces error code: 0
[2021-07-15 21:27:12] 2021-07-16 01:27:09,114 | INFO     | root                             | wrap_up                   | pilot has finished
[2021-07-15 21:27:12] 2021-07-16 01:27:09,771 [wrapper] ==== pilot stdout END ====
[2021-07-15 21:27:12] 2021-07-16 01:27:09,856 [wrapper] ==== wrapper stdout RESUME ====
[2021-07-15 21:27:12] 2021-07-16 01:27:09,953 [wrapper] Pilot exit status: 0
[2021-07-15 21:27:12] 2021-07-16 01:27:10,305 [wrapper] pandaids: 5121469486
[2021-07-15 21:27:12] 2021-07-16 01:27:10,484 [wrapper] apfmon messages muted
[2021-07-15 21:27:12] 2021-07-16 01:27:10,613 [wrapper] Test setup, not cleaning
[2021-07-15 21:27:12] 2021-07-16 01:27:10,859 [wrapper] ==== wrapper stdout END ====
[2021-07-15 21:27:12] 2021-07-16 01:27:11,172 [wrapper] ==== wrapper stderr END ====
[2021-07-15 21:27:12] 2021-07-16 01:27:11,622 [wrapper] wrapperexiting ec=0, duration=1417
[2021-07-15 21:27:12] 2021-07-16 01:27:11,693 [wrapper] apfmon messages muted
[2021-07-15 21:27:12]  *** Error codes and diagnostics ***
[2021-07-15 21:27:12]     "exeErrorCode": 0,
[2021-07-15 21:27:12]     "exeErrorDiag": "",
[2021-07-15 21:27:12]     "pilotErrorCode": 0,
[2021-07-15 21:27:12]     "pilotErrorDiag": "",
[2021-07-15 21:27:12]  *** Listing of results directory ***
[2021-07-15 21:27:12] total 45576
[2021-07-15 21:27:12] -rw-r--r-- 1 boinc boinc   334707 Jul 15 20:28 pilot2.tar.gz
[2021-07-15 21:27:12] -rwx------ 1 boinc boinc    20591 Jul 15 20:58 runpilot2-wrapper.sh
[2021-07-15 21:27:12] -rw-r--r-- 1 boinc boinc     3214 Jul 15 20:58 queuedata.json
[2021-07-15 21:27:12] -rw-r--r-- 1 boinc boinc      107 Jul 15 21:03 wrapper_26015_x86_64-pc-linux-gnu
[2021-07-15 21:27:12] -rwxr-xr-x 1 boinc boinc     6966 Jul 15 21:03 run_atlas
[2021-07-15 21:27:12] -rw-r--r-- 1 boinc boinc      112 Jul 15 21:03 job.xml
[2021-07-15 21:27:12] -rw-r--r-- 1 boinc boinc     6188 Jul 15 21:03 init_data.xml
[2021-07-15 21:27:12] drwxrwx--x 2 boinc boinc     4096 Jul 15 21:03 shared
[2021-07-15 21:27:12] -rw-r--r-- 1 boinc boinc        0 Jul 15 21:03 boinc_lockfile
[2021-07-15 21:27:12] -rw-r--r-- 1 boinc boinc 38288972 Jul 15 21:03 EVNT.04972714._000032.pool.root.1
[2021-07-15 21:27:12] -rw-r--r-- 1 boinc boinc    16551 Jul 15 21:03 start_atlas.sh
[2021-07-15 21:27:12] -rw-r--r-- 1 boinc boinc   344154 Jul 15 21:03 input.tar.gz
[2021-07-15 21:27:12] -rw-r--r-- 1 boinc boinc     2617 Jul 15 21:03 pandaJob.out
[2021-07-15 21:27:12] -rw------- 1 boinc boinc  1068229 Jul 15 21:04 agis_schedconf.cvmfs.json
[2021-07-15 21:27:12] -rw------- 1 boinc boinc  1967101 Jul 15 21:04 cric_ddmendpoints.json
[2021-07-15 21:27:12] drwx------ 4 boinc boinc     4096 Jul 15 21:05 pilot2
[2021-07-15 21:27:12] -rw------- 1 boinc boinc  1854713 Jul 15 21:26 output.1.235a5807-c358-4df5-8b8c-fe7530090292_58198.pool.root
[2021-07-15 21:27:12] -rw-r--r-- 1 boinc boinc      534 Jul 15 21:26 boinc_task_state.xml
[2021-07-15 21:27:12] -rw------- 1 boinc boinc     1011 Jul 15 21:26 memory_monitor_summary.json
[2021-07-15 21:27:12] -rw------- 1 boinc boinc   187980 Jul 15 21:26 235a5807-c358-4df5-8b8c-fe7530090292_58198.1.job.log.tgz
[2021-07-15 21:27:12] -rw-r--r-- 1 boinc boinc       25 Jul 15 21:27 wrapper_checkpoint.txt
[2021-07-15 21:27:12] -rw-r--r-- 1 boinc boinc     8192 Jul 15 21:27 boinc_mmap_file
[2021-07-15 21:27:12] -rw------- 1 boinc boinc     7041 Jul 15 21:27 heartbeat.json
[2021-07-15 21:27:12] -rw------- 1 boinc boinc     7686 Jul 15 21:27 pilotlog.txt
[2021-07-15 21:27:12] -rw------- 1 boinc boinc   183742 Jul 15 21:27 235a5807-c358-4df5-8b8c-fe7530090292_58198.1.job.log
[2021-07-15 21:27:12] -rw------- 1 boinc boinc      536 Jul 15 21:27 output.list
[2021-07-15 21:27:12] -rw-r--r-- 1 boinc boinc      748 Jul 15 21:27 runtime_log
[2021-07-15 21:27:12] -rw------- 1 boinc boinc  2242560 Jul 15 21:27 result.tar.gz
[2021-07-15 21:27:12] -rw-r--r-- 1 boinc boinc     9429 Jul 15 21:27 runtime_log.err
[2021-07-15 21:27:12] -rw------- 1 boinc boinc      562 Jul 15 21:27 BCXMDmwMROzn7Olcko1bjSoqABFKDmABFKDmumdXDmG2FKDmUixeVn.diag
[2021-07-15 21:27:12] -rw-r--r-- 1 boinc boinc    29764 Jul 15 21:27 stderr.txt
[2021-07-15 21:27:12] HITS file was successfully produced:
[2021-07-15 21:27:12] -rw------- 1 boinc boinc 1854713 Jul 15 21:26 shared/HITS.pool.root.1
[2021-07-15 21:27:12]  *** Contents of shared directory: ***
[2021-07-15 21:27:12] total 41756
[2021-07-15 21:27:12] -rw-r--r-- 1 boinc boinc   344154 Jul 15 21:03 input.tar.gz
[2021-07-15 21:27:12] -rw-r--r-- 1 boinc boinc 38288972 Jul 15 21:03 ATLAS.root_0
[2021-07-15 21:27:12] -rw-r--r-- 1 boinc boinc    16551 Jul 15 21:03 start_atlas.sh
[2021-07-15 21:27:12] -rw------- 1 boinc boinc  1854713 Jul 15 21:26 HITS.pool.root.1
[2021-07-15 21:27:12] -rw------- 1 boinc boinc  2242560 Jul 15 21:27 result.tar.gz
21:27:13 (2359): run_atlas exited; CPU time 500.399477
21:27:13 (2359): called boinc_finish(0)

</stderr_txt>
]]>


©2024 CERN