Name | 9rAODm31iOzn7Olcko1bjSoqABFKDmABFKDmumdXDm33FKDmJcxGlm_0 |
Workunit | 2105329 |
Created | 16 Jul 2021, 19:50:35 UTC |
Sent | 16 Jul 2021, 19:53:07 UTC |
Report deadline | 23 Jul 2021, 19:53:07 UTC |
Received | 16 Jul 2021, 21:44:02 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 4357 |
Run time | 49 min 50 sec |
CPU time | 18 min 2 sec |
Validate state | Valid |
Credit | 10.97 |
Device peak FLOPS | 3.04 GFLOPS |
Application version | ATLAS Simulation v1.04 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.64 GB |
Peak swap size | 2.37 GB |
Peak disk usage | 81.31 MB |
<core_client_version>7.9.3</core_client_version> <![CDATA[ <stderr_txt> 15:53:32 (118601): wrapper (7.7.26015): starting 15:53:32 (118601): wrapper: running run_atlas (--nthreads 1) [2021-07-16 15:53:32] Arguments: --nthreads 1 [2021-07-16 15:53:32] Threads: 1 [2021-07-16 15:53:32] Checking for CVMFS [2021-07-16 15:53:41] Probing /cvmfs/atlas.cern.ch... OK [2021-07-16 15:53:43] Probing /cvmfs/atlas-condb.cern.ch... OK [2021-07-16 15:53:43] Running cvmfs_config stat atlas.cern.ch [2021-07-16 15:53:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2021-07-16 15:53:44] 2.9.0.0 119796 0 24780 88496 3 1 3873436 4194304 0 130560 0 0 0.000 528 523 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 0 [2021-07-16 15:53:44] CVMFS is ok [2021-07-16 15:53:44] Efficiency of ATLAS tasks can be improved by the following measure(s): [2021-07-16 15:53:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io. [2021-07-16 15:53:44] Small home clusters do not require a local http proxy but it is suggested if [2021-07-16 15:53:44] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks. [2021-07-16 15:53:44] Further information can be found at the LHC@home message board. [2021-07-16 15:53:44] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2021-07-16 15:53:44] Checking for singularity binary... [2021-07-16 15:53:44] Using singularity found in PATH at /usr/local/bin/singularity [2021-07-16 15:53:44] Running /usr/local/bin/singularity --version [2021-07-16 15:53:44] singularity version 3.7.2+10-ga969f0f8c [2021-07-16 15:53:44] Checking singularity works with /usr/local/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2021-07-16 15:53:45] E5-2670 [2021-07-16 15:53:45] Singularity works [2021-07-16 15:53:45] Starting ATLAS job with PandaID=5122215452 [2021-07-16 15:53:45] Running command: /usr/local/bin/singularity exec --pwd /var/lib/boinc-client/slots/36 -B /cvmfs,/var /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2021-07-16 16:43:20] *** The last 200 lines of the pilot log: *** [2021-07-16 16:43:20] "model": "45", [2021-07-16 16:43:20] "model_name": "Intel(R) Xeon(R) CPU E5-2670 0 @ 2.60GHz", [2021-07-16 16:43:20] "node": "E5-2670", [2021-07-16 16:43:20] "platform": "Linux-4.15.0-142-generic-x86_64-with-centos-7.8.2003-Core" [2021-07-16 16:43:20] }, [2021-07-16 16:43:20] "transform": { [2021-07-16 16:43:20] "cpuTime": 9, [2021-07-16 16:43:20] "externalCpuTime": 66, [2021-07-16 16:43:20] "wallTime": 2656 [2021-07-16 16:43:20] } [2021-07-16 16:43:20] } [2021-07-16 16:43:20] } [2021-07-16 16:43:20] 2021-07-16 20:42:48,557 | DEBUG | pilot.user.atlas.common | update_server | no need to update logstash for this job [2021-07-16 16:43:20] 2021-07-16 20:42:48,558 | INFO | pilot.control.job | send_state | pilot will not update the server (heartbeat message will be written to file) [2021-07-16 16:43:20] 2021-07-16 20:42:48,558 | INFO | pilot.control.job | send_state | job 5122215452 has finished - writing final server update [2021-07-16 16:43:20] 2021-07-16 20:42:48,559 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics_string | job definition core count: 1 [2021-07-16 16:43:20] 2021-07-16 20:42:48,559 | INFO | pilot.user.atlas.jobmetrics | get_job_metrics_string | will not add max space = -37006171 B to job metrics [2021-07-16 16:43:20] 2021-07-16 20:42:48,560 | DEBUG | pilot.api.analytics | get_fitted_data | removing tails from data to be fitted [2021-07-16 16:43:20] 2021-07-16 20:42:48,560 | INFO | pilot.api.analytics | get_fitted_data | fitting pss+swap vs Time [2021-07-16 16:43:20] 2021-07-16 20:42:48,561 | INFO | pilot.api.analytics | get_fitted_data | current memory leak: 525.21 B/s (using 39 data points, chi2=788573) [2021-07-16 16:43:20] 2021-07-16 20:42:48,561 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics | job metrics="actualCoreCount=4 nEvents=2 dbTime=279.1 dbData=4211388 leak=525.21 chi2=788573 eventnu [2021-07-16 16:43:20] 2021-07-16 20:42:48,562 | INFO | pilot.control.job | get_data_structure | mean actualcorecount: 5.891892 [2021-07-16 16:43:20] 2021-07-16 20:42:48,562 | INFO | pilot.control.job | get_data_structure | total number of processed events: 2 (read) [2021-07-16 16:43:20] 2021-07-16 20:42:48,586 | INFO | pilot.util.container | execute | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2021-07-16 16:43:20] 2021-07-16 20:42:48,663 | INFO | pilot.user.atlas.utilities | get_memory_values | using path: /var/lib/boinc-client/slots/36/PanDA_Pilot-5122215452/memory_monitor_summary.json (trf n [2021-07-16 16:43:20] 2021-07-16 20:42:48,665 | DEBUG | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'Avg': {'nprocs': 4.934, 'nthreads': 5.826, 'pss': 1132494.0, 'rchar': 150881.0, [2021-07-16 16:43:20] 2021-07-16 20:42:48,665 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard info from prmon json [2021-07-16 16:43:20] 2021-07-16 20:42:48,665 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard memory fields from prmon json [2021-07-16 16:43:20] 2021-07-16 20:42:48,666 | INFO | pilot.util.timing | timing_report | .............................. [2021-07-16 16:43:20] 2021-07-16 20:42:48,666 | INFO | pilot.util.timing | timing_report | . Timing measurements: [2021-07-16 16:43:20] 2021-07-16 20:42:48,666 | INFO | pilot.util.timing | timing_report | . get job = 0 s [2021-07-16 16:43:20] 2021-07-16 20:42:48,666 | INFO | pilot.util.timing | timing_report | . initial setup = 2 s [2021-07-16 16:43:20] 2021-07-16 20:42:48,666 | INFO | pilot.util.timing | timing_report | . payload setup = 59 s [2021-07-16 16:43:20] 2021-07-16 20:42:48,666 | INFO | pilot.util.timing | timing_report | . total setup = 61 s [2021-07-16 16:43:20] 2021-07-16 20:42:48,666 | INFO | pilot.util.timing | timing_report | . stage-in = 0 s [2021-07-16 16:43:20] 2021-07-16 20:42:48,667 | INFO | pilot.util.timing | timing_report | . payload execution = 2777 s [2021-07-16 16:43:20] 2021-07-16 20:42:48,667 | INFO | pilot.util.timing | timing_report | . stage-out = 0 s [2021-07-16 16:43:20] 2021-07-16 20:42:48,667 | INFO | pilot.util.timing | timing_report | .............................. [2021-07-16 16:43:20] 2021-07-16 20:42:48,667 | DEBUG | pilot.control.job | send_state | is_harvester_mode(args) : False [2021-07-16 16:43:20] 2021-07-16 20:42:48,668 | DEBUG | pilot.control.job | write_heartbeat_to_file | heartbeat dictionary: {'jobId': '5122215452', 'state': 'finished', 'timestamp': '2021-07-16T16:42:48 [2021-07-16 16:43:20] 2021-07-16 20:42:48,669 | DEBUG | pilot.control.job | write_heartbeat_to_file | wrote heartbeat to file /var/lib/boinc-client/slots/36/heartbeat.json [2021-07-16 16:43:20] 2021-07-16 20:42:48,669 | DEBUG | pilot.control.job | queue_monitor | job 5122215452 was dequeued from the monitored payloads queue [2021-07-16 16:43:20] 2021-07-16 20:42:48,854 | DEBUG | pilot.control.job | queue_monitor | tmp job object deleted [2021-07-16 16:43:20] 2021-07-16 20:42:48,854 | INFO | pilot.control.job | make_job_report | [2021-07-16 16:43:20] 2021-07-16 20:42:48,855 | INFO | pilot.control.job | make_job_report | job summary report [2021-07-16 16:43:20] 2021-07-16 20:42:48,855 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2021-07-16 16:43:20] 2021-07-16 20:42:48,855 | INFO | pilot.control.job | make_job_report | PanDA job id: 5122215452 [2021-07-16 16:43:20] 2021-07-16 20:42:48,855 | INFO | pilot.control.job | make_job_report | task id: NULL [2021-07-16 16:43:20] 2021-07-16 20:42:48,855 | INFO | pilot.control.job | make_job_report | errors: (none) [2021-07-16 16:43:20] 2021-07-16 20:42:48,855 | INFO | pilot.control.job | make_job_report | status: LOG_TRANSFER = DONE [2021-07-16 16:43:20] 2021-07-16 20:42:48,855 | INFO | pilot.control.job | make_job_report | pilot state: finished [2021-07-16 16:43:20] 2021-07-16 20:42:48,855 | INFO | pilot.control.job | make_job_report | transexitcode: 0 [2021-07-16 16:43:20] 2021-07-16 20:42:48,855 | INFO | pilot.control.job | make_job_report | exeerrorcode: 0 [2021-07-16 16:43:20] 2021-07-16 20:42:48,855 | INFO | pilot.control.job | make_job_report | exeerrordiag: [2021-07-16 16:43:20] 2021-07-16 20:42:48,856 | INFO | pilot.control.job | make_job_report | exitcode: 0 [2021-07-16 16:43:20] 2021-07-16 20:42:48,856 | INFO | pilot.control.job | make_job_report | exitmsg: OK [2021-07-16 16:43:20] 2021-07-16 20:42:48,856 | INFO | pilot.control.job | make_job_report | cpuconsumptiontime: 1179 s [2021-07-16 16:43:20] 2021-07-16 20:42:48,856 | INFO | pilot.control.job | make_job_report | nevents: 2 [2021-07-16 16:43:20] 2021-07-16 20:42:48,856 | INFO | pilot.control.job | make_job_report | neventsw: 0 [2021-07-16 16:43:20] 2021-07-16 20:42:48,856 | INFO | pilot.control.job | make_job_report | pid: 142628 [2021-07-16 16:43:20] 2021-07-16 20:42:48,856 | INFO | pilot.control.job | make_job_report | pgrp: 142628 [2021-07-16 16:43:20] 2021-07-16 20:42:48,856 | INFO | pilot.control.job | make_job_report | corecount: 1 [2021-07-16 16:43:20] 2021-07-16 20:42:48,856 | INFO | pilot.control.job | make_job_report | event service: False [2021-07-16 16:43:20] 2021-07-16 20:42:48,856 | INFO | pilot.control.job | make_job_report | sizes: {24198403: 3864860, 24198404: 3866025, 24198405: 3866193, 24198406: 3866472, 24198416: 386635 [2021-07-16 16:43:20] 2021-07-16 20:42:48,856 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2021-07-16 16:43:20] 2021-07-16 20:42:48,857 | INFO | pilot.control.job | make_job_report | [2021-07-16 16:43:20] 2021-07-16 20:42:48,857 | DEBUG | pilot.control.job | has_job_completed | ls -lF /var/lib/boinc-client/slots/36: [2021-07-16 16:43:20] [2021-07-16 16:43:20] 2021-07-16 20:42:48,857 | INFO | pilot.util.container | execute | executing command: ls -lF /var/lib/boinc-client/slots/36 [2021-07-16 16:43:20] 2021-07-16 20:42:48,892 | DEBUG | pilot.control.job | has_job_completed | total 42760 [2021-07-16 16:43:20] -rw------- 1 boinc boinc 248745 Jul 16 16:42 061a7152-681b-4019-9899-1b825209d5dc_29838.1.job.log [2021-07-16 16:43:20] -rw------- 1 boinc boinc 190468 Jul 16 16:42 061a7152-681b-4019-9899-1b825209d5dc_29838.1.job.log.tgz [2021-07-16 16:43:20] -rw------- 1 boinc boinc 130 Jul 16 15:53 9rAODm31iOzn7Olcko1bjSoqABFKDmABFKDmumdXDm33FKDmJcxGlm.diag [2021-07-16 16:43:20] -rw------- 1 boinc boinc 1068956 Jul 16 15:55 agis_schedconf.cvmfs.json [2021-07-16 16:43:20] -rw-r--r-- 1 boinc boinc 0 Jul 16 15:53 boinc_lockfile [2021-07-16 16:43:20] -rw-r--r-- 1 boinc boinc 8192 Jul 16 16:42 boinc_mmap_file [2021-07-16 16:43:20] -rw-r--r-- 1 boinc boinc 534 Jul 16 16:41 boinc_task_state.xml [2021-07-16 16:43:20] -rw------- 1 boinc boinc 1967101 Jul 16 15:55 cric_ddmendpoints.json [2021-07-16 16:43:20] -rw-r--r-- 1 boinc boinc 38184411 Jul 16 15:53 EVNT.04972714._000028.pool.root.1 [2021-07-16 16:43:20] -rw------- 1 boinc boinc 8563 Jul 16 16:42 heartbeat.json [2021-07-16 16:43:20] -rw-r--r-- 1 boinc boinc 6188 Jul 16 15:53 init_data.xml [2021-07-16 16:43:20] -rw-r--r-- 1 boinc boinc 344102 Jul 16 15:53 input.tar.gz [2021-07-16 16:43:20] -rw-r--r-- 1 boinc boinc 112 Jul 16 15:53 job.xml [2021-07-16 16:43:20] -rw------- 1 boinc boinc 1018 Jul 16 16:42 memory_monitor_summary.json [2021-07-16 16:43:20] -rw------- 1 boinc boinc 1044066 Jul 16 16:40 output.1.061a7152-681b-4019-9899-1b825209d5dc_29838.pool.root [2021-07-16 16:43:20] -rw------- 1 boinc boinc 536 Jul 16 16:42 output.list [2021-07-16 16:43:20] -rw-r--r-- 1 boinc boinc 2583 Jul 16 15:53 pandaJob.out [2021-07-16 16:43:20] drwxrwx--- 2 boinc boinc 4096 Jul 16 16:42 PanDA_Pilot-5122215452/ [2021-07-16 16:43:20] drwx------ 4 boinc boinc 4096 Jul 16 15:55 pilot2/ [2021-07-16 16:43:20] -rw-r--r-- 1 boinc boinc 334707 Jul 16 15:34 pilot2.tar.gz [2021-07-16 16:43:20] -rw------- 1 boinc boinc 229774 Jul 16 16:42 pilotlog.txt [2021-07-16 16:43:20] -rw-r--r-- 1 boinc boinc 3214 Jul 16 15:50 queuedata.json [2021-07-16 16:43:20] -rwxr-xr-x 1 boinc boinc 6966 Jul 16 15:53 run_atlas* [2021-07-16 16:43:20] -rwx------ 1 boinc boinc 20591 Jul 16 15:50 runpilot2-wrapper.sh* [2021-07-16 16:43:20] -rw-r--r-- 1 boinc boinc 407 Jul 16 15:53 runtime_log [2021-07-16 16:43:20] -rw-r--r-- 1 boinc boinc 5574 Jul 16 15:53 runtime_log.err [2021-07-16 16:43:20] drwxrwx--x 2 boinc boinc 4096 Jul 16 15:53 shared/ [2021-07-16 16:43:20] -rw-r--r-- 1 boinc boinc 16551 Jul 16 15:53 start_atlas.sh [2021-07-16 16:43:20] -rw-r--r-- 1 boinc boinc 2198 Jul 16 15:53 stderr.txt [2021-07-16 16:43:20] -rw-r--r-- 1 boinc boinc 107 Jul 16 15:53 wrapper_26015_x86_64-pc-linux-gnu [2021-07-16 16:43:20] -rw-r--r-- 1 boinc boinc 26 Jul 16 16:42 wrapper_checkpoint.txt [2021-07-16 16:43:20] 2021-07-16 20:42:48,893 | INFO | pilot.util.queuehandling | queue_report | queue jobs has 0 job(s) [2021-07-16 16:43:20] 2021-07-16 20:42:48,893 | INFO | pilot.util.queuehandling | queue_report | queue payloads has 0 job(s) [2021-07-16 16:43:20] 2021-07-16 20:42:48,893 | INFO | pilot.util.queuehandling | queue_report | queue data_in has 0 job(s) [2021-07-16 16:43:20] 2021-07-16 20:42:48,893 | INFO | pilot.util.queuehandling | queue_report | queue data_out has 0 job(s) [2021-07-16 16:43:20] 2021-07-16 20:42:48,893 | INFO | pilot.util.queuehandling | queue_report | queue current_data_in has 0 job(s) [2021-07-16 16:43:20] 2021-07-16 20:42:48,893 | INFO | pilot.util.queuehandling | queue_report | queue validated_jobs has 0 job(s) [2021-07-16 16:43:20] 2021-07-16 20:42:48,893 | INFO | pilot.util.queuehandling | queue_report | queue validated_payloads has 0 job(s) [2021-07-16 16:43:20] 2021-07-16 20:42:48,893 | INFO | pilot.util.queuehandling | queue_report | queue monitored_payloads has 0 job(s) [2021-07-16 16:43:20] 2021-07-16 20:42:48,893 | INFO | pilot.util.queuehandling | queue_report | queue finished_jobs has 0 job(s) [2021-07-16 16:43:20] 2021-07-16 20:42:48,894 | INFO | pilot.util.queuehandling | queue_report | queue finished_payloads has 0 job(s) [2021-07-16 16:43:20] 2021-07-16 20:42:48,894 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_in has 1 job(s) [2021-07-16 16:43:20] 2021-07-16 20:42:48,894 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_out has 0 job(s) [2021-07-16 16:43:20] 2021-07-16 20:42:48,894 | INFO | pilot.util.queuehandling | queue_report | queue failed_jobs has 0 job(s) [2021-07-16 16:43:20] 2021-07-16 20:42:48,894 | INFO | pilot.util.queuehandling | queue_report | queue failed_payloads has 0 job(s) [2021-07-16 16:43:20] 2021-07-16 20:42:48,894 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_in has 0 job(s) [2021-07-16 16:43:20] 2021-07-16 20:42:48,894 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_out has 0 job(s) [2021-07-16 16:43:20] 2021-07-16 20:42:48,894 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobs has 0 job(s) [2021-07-16 16:43:20] 2021-07-16 20:42:48,894 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s) [2021-07-16 16:43:20] 2021-07-16 20:42:48,894 | INFO | pilot.control.job | has_job_completed | job 5122215452 has completed (purged errors) [2021-07-16 16:43:20] 2021-07-16 20:42:48,894 | INFO | pilot.util.processes | cleanup | overall cleanup function is called [2021-07-16 16:43:20] 2021-07-16 20:42:48,897 | DEBUG | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc-client/slots/36/PanDA_Pilot-5122215452 [2021-07-16 16:43:20] 2021-07-16 20:42:49,900 | INFO | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [142628] [2021-07-16 16:43:20] 2021-07-16 20:42:49,901 | INFO | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 142628 [2021-07-16 16:43:20] 2021-07-16 20:42:49,901 | INFO | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes [2021-07-16 16:43:20] 2021-07-16 20:42:50,904 | INFO | pilot.util.processes | cleanup | collected zombie processes [2021-07-16 16:43:20] 2021-07-16 20:42:50,904 | INFO | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=142628 [2021-07-16 16:43:20] 2021-07-16 20:42:51,080 | INFO | pilot.util.processes | kill_processes | process IDs to be killed: [142628] (in reverse order) [2021-07-16 16:43:20] 2021-07-16 20:42:51,196 | WARNING | pilot.util.processes | kill_processes | found no corresponding commands to process id(s) [2021-07-16 16:43:20] 2021-07-16 20:42:51,196 | INFO | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs [2021-07-16 16:43:20] 2021-07-16 20:42:51,196 | DEBUG | pilot.util.queuehandling | purge_queue | queue purged [2021-07-16 16:43:20] 2021-07-16 20:42:51,197 | INFO | pilot.control.job | retrieve | ready for new job [2021-07-16 16:43:20] 2021-07-16 20:42:51,197 | INFO | root | retrieve | pilot has finished for previous job - re-establishing logging [2021-07-16 16:43:20] 2021-07-16 20:42:51,198 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2021-07-16 16:43:20] 2021-07-16 20:42:51,198 | INFO | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 2.12.2 (1) *** [2021-07-16 16:43:20] 2021-07-16 20:42:51,198 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2021-07-16 16:43:20] 2021-07-16 20:42:51,199 | INFO | pilot.util.auxiliary | pilot_version_banner | [2021-07-16 16:43:20] 2021-07-16 20:42:51,218 | INFO | pilot.util.auxiliary | display_architecture_info | architecture information: [2021-07-16 16:43:20] 2021-07-16 20:42:51,556 | INFO | pilot.util.auxiliary | display_architecture_info | [2021-07-16 16:43:20] LSB Version: :core-4.1-amd64:core-4.1-noarch [2021-07-16 16:43:20] Distributor ID: CentOS [2021-07-16 16:43:20] Description: CentOS Linux release 7.8.2003 (Core) [2021-07-16 16:43:20] Release: 7.8.2003 [2021-07-16 16:43:20] Codename: Core [2021-07-16 16:43:20] 2021-07-16 20:42:51,557 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2021-07-16 16:43:20] 2021-07-16 20:42:52,059 | DEBUG | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc-client/slots/36 [2021-07-16 16:43:20] 2021-07-16 20:42:52,147 | INFO | pilot.util.monitoring | check_local_space | sufficient remaining disk space (42862641152 B) [2021-07-16 16:43:20] 2021-07-16 20:42:52,149 | WARNING | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job [2021-07-16 16:43:20] 2021-07-16 20:42:52,151 | DEBUG | pilot.control.job | retrieve | will not set job_aborted yet [2021-07-16 16:43:20] 2021-07-16 20:42:52,152 | DEBUG | pilot.control.job | retrieve | [job] retrieve thread has finished [2021-07-16 16:43:20] 2021-07-16 20:42:52,344 | DEBUG | pilot.control.payload | control | payload control ending since graceful_stop has been set [2021-07-16 16:43:20] 2021-07-16 20:42:52,346 | DEBUG | pilot.control.payload | control | will not set job_aborted yet [2021-07-16 16:43:20] 2021-07-16 20:42:52,346 | DEBUG | pilot.control.payload | control | [payload] control thread has finished [2021-07-16 16:43:20] 2021-07-16 20:42:52,352 | DEBUG | pilot.control.data | control | data control ending since graceful_stop has been set [2021-07-16 16:43:20] 2021-07-16 20:42:52,353 | DEBUG | pilot.control.data | control | will not set job_aborted yet [2021-07-16 16:43:20] 2021-07-16 20:42:52,354 | DEBUG | pilot.control.data | control | [data] control thread has finished [2021-07-16 16:43:20] 2021-07-16 20:42:52,360 | INFO | pilot.control.monitor | control | [monitor] control thread has ended [2021-07-16 16:43:20] 2021-07-16 20:42:52,496 | DEBUG | pilot.control.payload | validate_post | will not set job_aborted yet [2021-07-16 16:43:20] 2021-07-16 20:42:52,497 | INFO | pilot.control.payload | validate_post | [payload] validate_post thread has finished [2021-07-16 16:43:20] 2021-07-16 20:42:52,716 | DEBUG | pilot.control.job | control | job control ending since graceful_stop has been set [2021-07-16 16:43:20] 2021-07-16 20:42:52,718 | DEBUG | pilot.control.job | control | will not set job_aborted yet [2021-07-16 16:43:20] 2021-07-16 20:42:52,718 | DEBUG | pilot.control.job | control | [job] control thread has finished [2021-07-16 16:43:20] 2021-07-16 20:42:52,777 | DEBUG | pilot.control.data | copytool_in | will not set job_aborted yet [2021-07-16 16:43:20] 2021-07-16 20:42:52,777 | DEBUG | pilot.control.data | copytool_in | [data] copytool_in thread has finished [2021-07-16 16:43:20] 2021-07-16 20:42:52,872 | DEBUG | pilot.control.payload | failed_post | will not set job_aborted yet [2021-07-16 16:43:20] 2021-07-16 20:42:52,874 | INFO | pilot.control.payload | failed_post | [payload] failed_post thread has finished [2021-07-16 16:43:20] 2021-07-16 20:42:52,957 | WARNING | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration [2021-07-16 16:43:20] 2021-07-16 20:42:53,077 | DEBUG | pilot.control.job | create_data_payload | will not set job_aborted yet [2021-07-16 16:43:20] 2021-07-16 20:42:53,080 | DEBUG | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished [2021-07-16 16:43:20] 2021-07-16 20:42:53,141 | WARNING | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration [2021-07-16 16:43:20] 2021-07-16 20:42:53,254 | DEBUG | pilot.control.job | validate | will not set job_aborted yet [2021-07-16 16:43:20] 2021-07-16 20:42:53,256 | DEBUG | pilot.control.job | validate | [job] validate thread has finished [2021-07-16 16:43:20] 2021-07-16 20:42:53,317 | DEBUG | pilot.control.payload | execute_payloads | will not set job_aborted yet [2021-07-16 16:43:20] 2021-07-16 20:42:53,319 | INFO | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished [2021-07-16 16:43:20] 2021-07-16 20:42:53,609 | DEBUG | pilot.control.payload | validate_pre | will not set job_aborted yet [2021-07-16 16:43:20] 2021-07-16 20:42:53,611 | INFO | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished [2021-07-16 16:43:20] 2021-07-16 20:42:53,865 | WARNING | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration [2021-07-16 16:43:20] 2021-07-16 20:42:53,867 | DEBUG | pilot.control.job | queue_monitor | will not set job_aborted yet [2021-07-16 16:43:20] 2021-07-16 20:42:53,868 | DEBUG | pilot.control.job | queue_monitor | [job] queue monitor thread has finished [2021-07-16 16:43:20] 2021-07-16 20:42:53,959 | DEBUG | pilot.control.data | copytool_out | will not set job_aborted yet [2021-07-16 16:43:20] 2021-07-16 20:42:53,961 | DEBUG | pilot.control.data | copytool_out | [data] copytool_out thread has finished [2021-07-16 16:43:20] 2021-07-16 20:42:56,145 | DEBUG | pilot.control.data | queue_monitoring | will not set job_aborted yet [2021-07-16 16:43:20] 2021-07-16 20:42:56,146 | DEBUG | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished [2021-07-16 16:43:20] 2021-07-16 20:43:19,212 | WARNING | pilot.control.job | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 74 s) [2021-07-16 16:43:20] 2021-07-16 20:43:19,213 | DEBUG | pilot.util.processes | threads_aborted | aborting since the last relevant thread is about to finish [2021-07-16 16:43:20] 2021-07-16 20:43:19,213 | DEBUG | pilot.control.job | job_monitor | will proceed to set job_aborted [2021-07-16 16:43:20] 2021-07-16 20:43:19,213 | DEBUG | pilot.control.job | job_monitor | [job] job monitor thread has finished [2021-07-16 16:43:20] 2021-07-16 20:43:19,700 | INFO | pilot.workflow.generic | run | end of generic workflow (traces error code: 0) [2021-07-16 16:43:20] 2021-07-16 20:43:19,701 | INFO | root | wrap_up | traces error code: 0 [2021-07-16 16:43:20] 2021-07-16 20:43:19,701 | INFO | root | wrap_up | pilot has finished [2021-07-16 16:43:20] 2021-07-16 20:43:19,876 [wrapper] ==== pilot stdout END ==== [2021-07-16 16:43:20] 2021-07-16 20:43:19,890 [wrapper] ==== wrapper stdout RESUME ==== [2021-07-16 16:43:20] 2021-07-16 20:43:19,919 [wrapper] Pilot exit status: 0 [2021-07-16 16:43:20] 2021-07-16 20:43:19,999 [wrapper] pandaids: 5122215452 [2021-07-16 16:43:20] 2021-07-16 20:43:20,016 [wrapper] apfmon messages muted [2021-07-16 16:43:20] 2021-07-16 20:43:20,025 [wrapper] Test setup, not cleaning [2021-07-16 16:43:20] 2021-07-16 20:43:20,051 [wrapper] ==== wrapper stdout END ==== [2021-07-16 16:43:20] 2021-07-16 20:43:20,083 [wrapper] ==== wrapper stderr END ==== [2021-07-16 16:43:20] 2021-07-16 20:43:20,111 [wrapper] wrapperexiting ec=0, duration=2973 [2021-07-16 16:43:20] 2021-07-16 20:43:20,119 [wrapper] apfmon messages muted [2021-07-16 16:43:20] *** Error codes and diagnostics *** [2021-07-16 16:43:20] "exeErrorCode": 0, [2021-07-16 16:43:20] "exeErrorDiag": "", [2021-07-16 16:43:20] "pilotErrorCode": 0, [2021-07-16 16:43:20] "pilotErrorDiag": "", [2021-07-16 16:43:20] *** Listing of results directory *** [2021-07-16 16:43:20] total 44060 [2021-07-16 16:43:20] -rw-r--r-- 1 boinc boinc 334707 Jul 16 15:34 pilot2.tar.gz [2021-07-16 16:43:20] -rwx------ 1 boinc boinc 20591 Jul 16 15:50 runpilot2-wrapper.sh [2021-07-16 16:43:20] -rw-r--r-- 1 boinc boinc 3214 Jul 16 15:50 queuedata.json [2021-07-16 16:43:20] -rw-r--r-- 1 boinc boinc 107 Jul 16 15:53 wrapper_26015_x86_64-pc-linux-gnu [2021-07-16 16:43:20] -rwxr-xr-x 1 boinc boinc 6966 Jul 16 15:53 run_atlas [2021-07-16 16:43:20] -rw-r--r-- 1 boinc boinc 112 Jul 16 15:53 job.xml [2021-07-16 16:43:20] drwxrwx--x 2 boinc boinc 4096 Jul 16 15:53 shared [2021-07-16 16:43:20] -rw-r--r-- 1 boinc boinc 6188 Jul 16 15:53 init_data.xml [2021-07-16 16:43:20] -rw-r--r-- 1 boinc boinc 0 Jul 16 15:53 boinc_lockfile [2021-07-16 16:43:20] -rw-r--r-- 1 boinc boinc 16551 Jul 16 15:53 start_atlas.sh [2021-07-16 16:43:20] -rw-r--r-- 1 boinc boinc 344102 Jul 16 15:53 input.tar.gz [2021-07-16 16:43:20] -rw-r--r-- 1 boinc boinc 38184411 Jul 16 15:53 EVNT.04972714._000028.pool.root.1 [2021-07-16 16:43:20] -rw-r--r-- 1 boinc boinc 2583 Jul 16 15:53 pandaJob.out [2021-07-16 16:43:20] -rw------- 1 boinc boinc 1068956 Jul 16 15:55 agis_schedconf.cvmfs.json [2021-07-16 16:43:20] -rw------- 1 boinc boinc 1967101 Jul 16 15:55 cric_ddmendpoints.json [2021-07-16 16:43:20] drwx------ 4 boinc boinc 4096 Jul 16 15:55 pilot2 [2021-07-16 16:43:20] -rw------- 1 boinc boinc 1044066 Jul 16 16:40 output.1.061a7152-681b-4019-9899-1b825209d5dc_29838.pool.root [2021-07-16 16:43:20] -rw-r--r-- 1 boinc boinc 534 Jul 16 16:41 boinc_task_state.xml [2021-07-16 16:43:20] -rw------- 1 boinc boinc 1018 Jul 16 16:42 memory_monitor_summary.json [2021-07-16 16:43:20] -rw------- 1 boinc boinc 190468 Jul 16 16:42 061a7152-681b-4019-9899-1b825209d5dc_29838.1.job.log.tgz [2021-07-16 16:43:20] -rw------- 1 boinc boinc 8563 Jul 16 16:42 heartbeat.json [2021-07-16 16:43:20] -rw-r--r-- 1 boinc boinc 8192 Jul 16 16:43 boinc_mmap_file [2021-07-16 16:43:20] -rw-r--r-- 1 boinc boinc 26 Jul 16 16:43 wrapper_checkpoint.txt [2021-07-16 16:43:20] -rw------- 1 boinc boinc 7363 Jul 16 16:43 pilotlog.txt [2021-07-16 16:43:20] -rw------- 1 boinc boinc 263420 Jul 16 16:43 061a7152-681b-4019-9899-1b825209d5dc_29838.1.job.log [2021-07-16 16:43:20] -rw------- 1 boinc boinc 536 Jul 16 16:43 output.list [2021-07-16 16:43:20] -rw-r--r-- 1 boinc boinc 9429 Jul 16 16:43 runtime_log.err [2021-07-16 16:43:20] -rw-r--r-- 1 boinc boinc 748 Jul 16 16:43 runtime_log [2021-07-16 16:43:20] -rw------- 1 boinc boinc 1515520 Jul 16 16:43 result.tar.gz [2021-07-16 16:43:20] -rw------- 1 boinc boinc 564 Jul 16 16:43 9rAODm31iOzn7Olcko1bjSoqABFKDmABFKDmumdXDm33FKDmJcxGlm.diag [2021-07-16 16:43:20] -rw-r--r-- 1 boinc boinc 29594 Jul 16 16:43 stderr.txt [2021-07-16 16:43:20] HITS file was successfully produced: [2021-07-16 16:43:20] -rw------- 1 boinc boinc 1044066 Jul 16 16:40 shared/HITS.pool.root.1 [2021-07-16 16:43:20] *** Contents of shared directory: *** [2021-07-16 16:43:20] total 40152 [2021-07-16 16:43:20] -rw-r--r-- 1 boinc boinc 38184411 Jul 16 15:53 ATLAS.root_0 [2021-07-16 16:43:20] -rw-r--r-- 1 boinc boinc 16551 Jul 16 15:53 start_atlas.sh [2021-07-16 16:43:20] -rw-r--r-- 1 boinc boinc 344102 Jul 16 15:53 input.tar.gz [2021-07-16 16:43:20] -rw------- 1 boinc boinc 1044066 Jul 16 16:40 HITS.pool.root.1 [2021-07-16 16:43:20] -rw------- 1 boinc boinc 1515520 Jul 16 16:43 result.tar.gz 16:43:21 (118601): run_atlas exited; CPU time 1082.074009 16:43:21 (118601): called boinc_finish(0) </stderr_txt> ]]>
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