Name ChxKDmHDzOzn7Olcko1bjSoqABFKDmABFKDmumdXDmS5FKDmKgRtTm_1
Workunit 2105756
Created 17 Jul 2021, 13:26:30 UTC
Sent 17 Jul 2021, 13:44:28 UTC
Report deadline 24 Jul 2021, 13:44:28 UTC
Received 17 Jul 2021, 14:52:48 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4357
Run time 1 hours 0 min 1 sec
CPU time 17 min 38 sec
Validate state Valid
Credit 13.13
Device peak FLOPS 3.04 GFLOPS
Application version ATLAS Simulation v1.04 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 1.43 GB
Peak swap size 35.20 GB
Peak disk usage 79.49 MB

Stderr output

<core_client_version>7.9.3</core_client_version>
<![CDATA[
<stderr_txt>
09:44:50 (70564): wrapper (7.7.26015): starting
09:44:50 (70564): wrapper: running run_atlas (--nthreads 1)
[2021-07-17 09:44:50] Arguments: --nthreads 1
[2021-07-17 09:44:50] Threads: 1
[2021-07-17 09:44:50] Checking for CVMFS
[2021-07-17 09:44:52] Probing /cvmfs/atlas.cern.ch... OK
[2021-07-17 09:44:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2021-07-17 09:44:53] Running cvmfs_config stat atlas.cern.ch
[2021-07-17 09:44:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2021-07-17 09:44:54] 2.9.0.0 36149 75 51568 88540 0 16 2555346 4194304 680 130560 0 152942 99.002 139464 1093 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 0
[2021-07-17 09:44:54] CVMFS is ok
[2021-07-17 09:44:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2021-07-17 09:44:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2021-07-17 09:44:54] Small home clusters do not require a local http proxy but it is suggested if
[2021-07-17 09:44:54] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2021-07-17 09:44:54] Further information can be found at the LHC@home message board.
[2021-07-17 09:44:54] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2021-07-17 09:44:54] Checking for singularity binary...
[2021-07-17 09:44:54] Using singularity found in PATH at /usr/local/bin/singularity
[2021-07-17 09:44:54] Running /usr/local/bin/singularity --version
[2021-07-17 09:44:54] singularity version 3.7.2+10-ga969f0f8c
[2021-07-17 09:44:54] Checking singularity works with /usr/local/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2021-07-17 09:44:55] E5-2670
[2021-07-17 09:44:55] Singularity works
[2021-07-17 09:44:55] Starting ATLAS job with PandaID=5122763453
[2021-07-17 09:44:55] Running command: /usr/local/bin/singularity exec --pwd /var/lib/boinc-client/slots/25 -B /cvmfs,/var /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2021-07-17 10:44:47]  *** The last 200 lines of the pilot log: ***
[2021-07-17 10:44:47] 2021-07-17 14:43:47,286 | INFO     | pilot.util.timing                | timing_report             | . Timing measurements:
[2021-07-17 10:44:47] 2021-07-17 14:43:47,286 | INFO     | pilot.util.timing                | timing_report             | . get job = 2 s
[2021-07-17 10:44:47] 2021-07-17 14:43:47,286 | INFO     | pilot.util.timing                | timing_report             | . initial setup = 3 s
[2021-07-17 10:44:47] 2021-07-17 14:43:47,286 | INFO     | pilot.util.timing                | timing_report             | . payload setup = 59 s
[2021-07-17 10:44:47] 2021-07-17 14:43:47,286 | INFO     | pilot.util.timing                | timing_report             | . total setup = 62 s
[2021-07-17 10:44:47] 2021-07-17 14:43:47,286 | INFO     | pilot.util.timing                | timing_report             | . stage-in = 0 s
[2021-07-17 10:44:47] 2021-07-17 14:43:47,286 | INFO     | pilot.util.timing                | timing_report             | . payload execution = 3259 s
[2021-07-17 10:44:47] 2021-07-17 14:43:47,287 | INFO     | pilot.util.timing                | timing_report             | . stage-out = 0 s
[2021-07-17 10:44:47] 2021-07-17 14:43:47,287 | INFO     | pilot.util.timing                | timing_report             | ..............................
[2021-07-17 10:44:47] 2021-07-17 14:43:47,287 | INFO     | pilot.user.atlas.diagnose        | get_log_extracts          | building log extracts (sent to the server as 'pilotLog')
[2021-07-17 10:44:47] 2021-07-17 14:43:47,287 | DEBUG    | pilot.user.atlas.diagnose        | get_panda_tracer_log      | PanDA tracer log does not exist: /var/lib/boinc-client/slots/25/PanDA_Pilot-5122763453/pandatracerlo
[2021-07-17 10:44:47] 2021-07-17 14:43:47,287 | INFO     | pilot.util.container             | execute                   | executing command: tail -n 20 /var/lib/boinc-client/slots/25/PanDA_Pilot-5122763453/pilotlog.txt
[2021-07-17 10:44:47] 2021-07-17 14:43:47,320 | WARNING  | pilot.control.job                | add_timing_and_extracts   | 
[2021-07-17 10:44:47] XXXXXXXXXXXXXXXXXXXXX[begin log extracts]
[2021-07-17 10:44:47] - Log from pilotlog.txt -
[2021-07-17 10:44:47] 2021-07-17 14:43:47,171 | INFO     | pilot.control.job                | get_data_structure        | mean actualcorecount: 3.568182
[2021-07-17 10:44:47] 2021-07-17 14:43:47,171 | INFO     | pilot.control.job                | get_data_structure        | total number of processed events: 2 (read)
[2021-07-17 10:44:47] 2021-07-17 14:43:47,190 | INFO     | pilot.util.container             | execute                   | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2021-07-17 10:44:47] 2021-07-17 14:43:47,283 | INFO     | pilot.user.atlas.utilities       | get_memory_values         | using path: /var/lib/boinc-client/slots/25/PanDA_Pilot-5122763453/memory_monitor_summary.json (trf n
[2021-07-17 10:44:47] 2021-07-17 14:43:47,285 | DEBUG    | pilot.user.atlas.utilities       | get_memory_monitor_info   | summary_dictionary={'Avg': {'nprocs': 5.0, 'nthreads': 5.943, 'pss': 1063439.0, 'rchar': 207305.0, '
[2021-07-17 10:44:47] 2021-07-17 14:43:47,285 | INFO     | pilot.user.atlas.utilities       | get_memory_monitor_info   | extracted standard info from prmon json
[2021-07-17 10:44:47] 2021-07-17 14:43:47,285 | INFO     | pilot.user.atlas.utilities       | get_memory_monitor_info   | extracted standard memory fields from prmon json
[2021-07-17 10:44:47] 2021-07-17 14:43:47,286 | INFO     | pilot.util.timing                | timing_report             | ..............................
[2021-07-17 10:44:47] 2021-07-17 14:43:47,286 | INFO     | pilot.util.timing                | timing_report             | . Timing measurements:
[2021-07-17 10:44:47] 2021-07-17 14:43:47,286 | INFO     | pilot.util.timing                | timing_report             | . get job = 2 s
[2021-07-17 10:44:47] 2021-07-17 14:43:47,286 | INFO     | pilot.util.timing                | timing_report             | . initial setup = 3 s
[2021-07-17 10:44:47] 2021-07-17 14:43:47,286 | INFO     | pilot.util.timing                | timing_report             | . payload setup = 59 s
[2021-07-17 10:44:47] 2021-07-17 14:43:47,286 | INFO     | pilot.util.timing                | timing_report             | . total setup = 62 s
[2021-07-17 10:44:47] 2021-07-17 14:43:47,286 | INFO     | pilot.util.timing                | timing_report             | . stage-in = 0 s
[2021-07-17 10:44:47] 2021-07-17 14:43:47,286 | INFO     | pilot.util.timing                | timing_report             | . payload execution = 3259 s
[2021-07-17 10:44:47] 2021-07-17 14:43:47,287 | INFO     | pilot.util.timing                | timing_report             | . stage-out = 0 s
[2021-07-17 10:44:47] 2021-07-17 14:43:47,287 | INFO     | pilot.util.timing                | timing_report             | ..............................
[2021-07-17 10:44:47] 2021-07-17 14:43:47,287 | INFO     | pilot.user.atlas.diagnose        | get_log_extracts          | building log extracts (sent to the server as 'pilotLog')
[2021-07-17 10:44:47] 2021-07-17 14:43:47,287 | DEBUG    | pilot.user.atlas.diagnose        | get_panda_tracer_log      | PanDA tracer log does not exist: /var/lib/boinc-client/slots/25/PanDA_Pilot-5122763453/pandatracerlo
[2021-07-17 10:44:47] 2021-07-17 14:43:47,287 | INFO     | pilot.util.container             | execute                   | executing command: tail -n 20 /var/lib/boinc-client/slots/25/PanDA_Pilot-5122763453/pilotlog.txt
[2021-07-17 10:44:47] XXXXXXXXXXXXXXXXXXXXX[end log extracts]
[2021-07-17 10:44:47] 2021-07-17 14:43:47,320 | WARNING  | pilot.control.job                | add_error_codes           | pilotErrorCodes = [1305] (will report primary/first error code)
[2021-07-17 10:44:47] 2021-07-17 14:43:47,321 | WARNING  | pilot.control.job                | add_error_codes           | pilotErrorDiags = ['Failed to execute payload'] (will report primary/first error diag)
[2021-07-17 10:44:47] 2021-07-17 14:43:47,321 | DEBUG    | pilot.control.job                | send_state                | is_harvester_mode(args) : False
[2021-07-17 10:44:47] 2021-07-17 14:43:47,322 | DEBUG    | pilot.control.job                | write_heartbeat_to_file   | heartbeat dictionary: {'jobId': '5122763453', 'state': 'failed', 'timestamp': '2021-07-17T10:43:47-0
[2021-07-17 10:44:47] 2021-07-17 14:43:47,323 | DEBUG    | pilot.control.job                | write_heartbeat_to_file   | wrote heartbeat to file /var/lib/boinc-client/slots/25/heartbeat.json
[2021-07-17 10:44:47] 2021-07-17 14:43:47,323 | DEBUG    | pilot.control.job                | queue_monitor             | job 5122763453 was dequeued from the monitored payloads queue
[2021-07-17 10:44:47] 2021-07-17 14:43:47,508 | DEBUG    | pilot.control.job                | queue_monitor             | tmp job object deleted
[2021-07-17 10:44:47] 2021-07-17 14:43:47,508 | INFO     | pilot.control.job                | make_job_report           | 
[2021-07-17 10:44:47] 2021-07-17 14:43:47,509 | INFO     | pilot.control.job                | make_job_report           | job summary report
[2021-07-17 10:44:47] 2021-07-17 14:43:47,509 | INFO     | pilot.control.job                | make_job_report           | --------------------------------------------------
[2021-07-17 10:44:47] 2021-07-17 14:43:47,509 | INFO     | pilot.control.job                | make_job_report           | PanDA job id: 5122763453
[2021-07-17 10:44:47] 2021-07-17 14:43:47,509 | INFO     | pilot.control.job                | make_job_report           | task id: NULL
[2021-07-17 10:44:47] 2021-07-17 14:43:47,509 | INFO     | pilot.control.job                | make_job_report           | error 1/1: 1305: Failed to execute payload
[2021-07-17 10:44:47] 2021-07-17 14:43:47,509 | INFO     | pilot.control.job                | make_job_report           | status: LOG_TRANSFER = DONE 
[2021-07-17 10:44:47] 2021-07-17 14:43:47,510 | INFO     | pilot.control.job                | make_job_report           | pilot state: failed 
[2021-07-17 10:44:47] 2021-07-17 14:43:47,510 | INFO     | pilot.control.job                | make_job_report           | transexitcode: 0
[2021-07-17 10:44:47] 2021-07-17 14:43:47,510 | INFO     | pilot.control.job                | make_job_report           | exeerrorcode: 0
[2021-07-17 10:44:47] 2021-07-17 14:43:47,510 | INFO     | pilot.control.job                | make_job_report           | exeerrordiag: 
[2021-07-17 10:44:47] 2021-07-17 14:43:47,510 | INFO     | pilot.control.job                | make_job_report           | exitcode: 0
[2021-07-17 10:44:47] 2021-07-17 14:43:47,510 | INFO     | pilot.control.job                | make_job_report           | exitmsg: OK
[2021-07-17 10:44:47] 2021-07-17 14:43:47,511 | INFO     | pilot.control.job                | make_job_report           | cpuconsumptiontime: 1162 s
[2021-07-17 10:44:47] 2021-07-17 14:43:47,511 | INFO     | pilot.control.job                | make_job_report           | nevents: 2
[2021-07-17 10:44:47] 2021-07-17 14:43:47,511 | INFO     | pilot.control.job                | make_job_report           | neventsw: 0
[2021-07-17 10:44:47] 2021-07-17 14:43:47,511 | INFO     | pilot.control.job                | make_job_report           | pid: 90386
[2021-07-17 10:44:47] 2021-07-17 14:43:47,511 | INFO     | pilot.control.job                | make_job_report           | pgrp: 90386
[2021-07-17 10:44:47] 2021-07-17 14:43:47,511 | INFO     | pilot.control.job                | make_job_report           | corecount: 1
[2021-07-17 10:44:47] 2021-07-17 14:43:47,512 | INFO     | pilot.control.job                | make_job_report           | event service: False
[2021-07-17 10:44:47] 2021-07-17 14:43:47,512 | INFO     | pilot.control.job                | make_job_report           | sizes: {24262670: 3865025, 24262671: 3866302, 24262672: 3866581, 24262683: 3866467, 24266002: 389060
[2021-07-17 10:44:47] 2021-07-17 14:43:47,512 | INFO     | pilot.control.job                | make_job_report           | --------------------------------------------------
[2021-07-17 10:44:47] 2021-07-17 14:43:47,512 | INFO     | pilot.control.job                | make_job_report           | 
[2021-07-17 10:44:47] 2021-07-17 14:43:47,512 | DEBUG    | pilot.control.job                | has_job_completed         | ls -lF /var/lib/boinc-client/slots/25:
[2021-07-17 10:44:47] 
[2021-07-17 10:44:47] 2021-07-17 14:43:47,512 | INFO     | pilot.util.container             | execute                   | executing command: ls -lF /var/lib/boinc-client/slots/25
[2021-07-17 10:44:47] 2021-07-17 14:43:47,584 | DEBUG    | pilot.control.job                | has_job_completed         | total 41316
[2021-07-17 10:44:47] -rw------- 1 boinc boinc   370892 Jul 17 10:43 77a10780-e87b-4acc-9b16-d8c743f9c173_2641.1.job.log
[2021-07-17 10:44:47] -rw------- 1 boinc boinc   190568 Jul 17 10:41 77a10780-e87b-4acc-9b16-d8c743f9c173_2641.1.job.log.tgz
[2021-07-17 10:44:47] -rw------- 1 boinc boinc  1068233 Jul 17 09:46 agis_schedconf.cvmfs.json
[2021-07-17 10:44:47] -rw-r--r-- 1 boinc boinc        0 Jul 17 09:44 boinc_lockfile
[2021-07-17 10:44:47] -rw-r--r-- 1 boinc boinc     8192 Jul 17 10:43 boinc_mmap_file
[2021-07-17 10:44:47] -rw-r--r-- 1 boinc boinc      534 Jul 17 10:41 boinc_task_state.xml
[2021-07-17 10:44:47] -rw------- 1 boinc boinc      130 Jul 17 09:44 ChxKDmHDzOzn7Olcko1bjSoqABFKDmABFKDmumdXDmS5FKDmKgRtTm.diag
[2021-07-17 10:44:47] -rw------- 1 boinc boinc  1967101 Jul 17 09:46 cric_ddmendpoints.json
[2021-07-17 10:44:47] -rw-r--r-- 1 boinc boinc 37498453 Jul 17 09:44 EVNT.04972714._000025.pool.root.1
[2021-07-17 10:44:47] -rw------- 1 boinc boinc     8742 Jul 17 10:43 heartbeat.json
[2021-07-17 10:44:47] -rw-r--r-- 1 boinc boinc     6188 Jul 17 09:44 init_data.xml
[2021-07-17 10:44:47] -rw-r--r-- 1 boinc boinc   352953 Jul 17 09:44 input.tar.gz
[2021-07-17 10:44:47] -rw-r--r-- 1 boinc boinc      112 Jul 17 09:44 job.xml
[2021-07-17 10:44:47] -rw------- 1 boinc boinc     1016 Jul 17 10:41 memory_monitor_summary.json
[2021-07-17 10:44:47] -rw------- 1 boinc boinc      261 Jul 17 10:41 output.list
[2021-07-17 10:44:47] -rw-r--r-- 1 boinc boinc     2594 Jul 17 09:44 pandaJob.out
[2021-07-17 10:44:47] drwxrwx--- 2 boinc boinc     4096 Jul 17 10:43 PanDA_Pilot-5122763453/
[2021-07-17 10:44:47] drwx------ 4 boinc boinc     4096 Jul 17 09:46 pilot2/
[2021-07-17 10:44:47] -rw-r--r-- 1 boinc boinc   343058 Jul 16 10:22 pilot2.tar.gz
[2021-07-17 10:44:47] -rw------- 1 boinc boinc   351806 Jul 17 10:43 pilotlog.txt
[2021-07-17 10:44:47] -rw-r--r-- 1 boinc boinc     3214 Jul 17 09:07 queuedata.json
[2021-07-17 10:44:47] -rwxr-xr-x 1 boinc boinc     6966 Jul 17 09:44 run_atlas*
[2021-07-17 10:44:47] -rwx------ 1 boinc boinc    20589 Jul 17 09:07 runpilot2-wrapper.sh*
[2021-07-17 10:44:47] -rw-r--r-- 1 boinc boinc      407 Jul 17 09:44 runtime_log
[2021-07-17 10:44:47] -rw-r--r-- 1 boinc boinc     5577 Jul 17 09:44 runtime_log.err
[2021-07-17 10:44:47] drwxrwx--x 2 boinc boinc     4096 Jul 17 09:44 shared/
[2021-07-17 10:44:47] -rw-r--r-- 1 boinc boinc    16565 Jul 17 09:44 start_atlas.sh
[2021-07-17 10:44:47] -rw-r--r-- 1 boinc boinc     2209 Jul 17 09:44 stderr.txt
[2021-07-17 10:44:47] -rw-r--r-- 1 boinc boinc      107 Jul 17 09:44 wrapper_26015_x86_64-pc-linux-gnu
[2021-07-17 10:44:47] -rw-r--r-- 1 boinc boinc       25 Jul 17 10:43 wrapper_checkpoint.txt
[2021-07-17 10:44:47] 2021-07-17 14:43:47,585 | INFO     | pilot.util.queuehandling         | queue_report              | queue jobs has 0 job(s)
[2021-07-17 10:44:47] 2021-07-17 14:43:47,585 | INFO     | pilot.util.queuehandling         | queue_report              | queue payloads has 0 job(s)
[2021-07-17 10:44:47] 2021-07-17 14:43:47,585 | INFO     | pilot.util.queuehandling         | queue_report              | queue data_in has 0 job(s)
[2021-07-17 10:44:47] 2021-07-17 14:43:47,585 | INFO     | pilot.util.queuehandling         | queue_report              | queue data_out has 0 job(s)
[2021-07-17 10:44:47] 2021-07-17 14:43:47,585 | INFO     | pilot.util.queuehandling         | queue_report              | queue current_data_in has 0 job(s)
[2021-07-17 10:44:47] 2021-07-17 14:43:47,585 | INFO     | pilot.util.queuehandling         | queue_report              | queue validated_jobs has 0 job(s)
[2021-07-17 10:44:47] 2021-07-17 14:43:47,585 | INFO     | pilot.util.queuehandling         | queue_report              | queue validated_payloads has 0 job(s)
[2021-07-17 10:44:47] 2021-07-17 14:43:47,585 | INFO     | pilot.util.queuehandling         | queue_report              | queue monitored_payloads has 0 job(s)
[2021-07-17 10:44:47] 2021-07-17 14:43:47,586 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_jobs has 0 job(s)
[2021-07-17 10:44:47] 2021-07-17 14:43:47,586 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_payloads has 0 job(s)
[2021-07-17 10:44:47] 2021-07-17 14:43:47,586 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_data_in has 1 job(s)
[2021-07-17 10:44:47] 2021-07-17 14:43:47,586 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_data_out has 0 job(s)
[2021-07-17 10:44:47] 2021-07-17 14:43:47,586 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_jobs has 0 job(s)
[2021-07-17 10:44:47] 2021-07-17 14:43:47,586 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_payloads has 0 job(s)
[2021-07-17 10:44:47] 2021-07-17 14:43:47,586 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_data_in has 0 job(s)
[2021-07-17 10:44:47] 2021-07-17 14:43:47,587 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_data_out has 0 job(s)
[2021-07-17 10:44:47] 2021-07-17 14:43:47,587 | INFO     | pilot.util.queuehandling         | queue_report              | queue completed_jobs has 0 job(s)
[2021-07-17 10:44:47] 2021-07-17 14:43:47,587 | INFO     | pilot.util.queuehandling         | queue_report              | queue completed_jobids has 1 job(s)
[2021-07-17 10:44:47] 2021-07-17 14:43:47,587 | INFO     | pilot.control.job                | has_job_completed         | job 5122763453 has completed (purged errors)
[2021-07-17 10:44:47] 2021-07-17 14:43:47,587 | INFO     | pilot.util.processes             | cleanup                   | overall cleanup function is called
[2021-07-17 10:44:47] 2021-07-17 14:43:47,592 | DEBUG    | pilot.util.processes             | cleanup                   | work directory was removed: /var/lib/boinc-client/slots/25/PanDA_Pilot-5122763453
[2021-07-17 10:44:47] 2021-07-17 14:43:48,596 | INFO     | pilot.info.jobdata               | collect_zombies           | --- collectZombieJob: --- 10, [90386]
[2021-07-17 10:44:47] 2021-07-17 14:43:48,597 | INFO     | pilot.info.jobdata               | collect_zombies           | zombie collector trying to kill pid 90386
[2021-07-17 10:44:47] 2021-07-17 14:43:48,597 | INFO     | pilot.info.jobdata               | collect_zombies           | harmless exception when collecting zombies: [Errno 10] No child processes
[2021-07-17 10:44:47] 2021-07-17 14:43:49,600 | INFO     | pilot.util.processes             | cleanup                   | collected zombie processes
[2021-07-17 10:44:47] 2021-07-17 14:43:49,600 | INFO     | pilot.util.processes             | cleanup                   | will now attempt to kill all subprocesses of pid=90386
[2021-07-17 10:44:47] 2021-07-17 14:43:49,793 | INFO     | pilot.util.processes             | kill_processes            | process IDs to be killed: [90386] (in reverse order)
[2021-07-17 10:44:47] 2021-07-17 14:43:49,899 | WARNING  | pilot.util.processes             | kill_processes            | found no corresponding commands to process id(s)
[2021-07-17 10:44:47] 2021-07-17 14:43:49,900 | INFO     | pilot.util.processes             | kill_orphans              | Do not look for orphan processes in BOINC jobs
[2021-07-17 10:44:47] 2021-07-17 14:43:49,900 | DEBUG    | pilot.util.queuehandling         | purge_queue               | queue purged
[2021-07-17 10:44:47] 2021-07-17 14:43:49,901 | INFO     | pilot.control.job                | retrieve                  | ready for new job
[2021-07-17 10:44:47] 2021-07-17 14:43:49,901 | INFO     | root                             | retrieve                  | pilot has finished for previous job - re-establishing logging
[2021-07-17 10:44:47] 2021-07-17 14:43:49,902 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ****************************************
[2021-07-17 10:44:47] 2021-07-17 14:43:49,902 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ***  PanDA Pilot version 2.12.3 (9)  ***
[2021-07-17 10:44:47] 2021-07-17 14:43:49,902 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ****************************************
[2021-07-17 10:44:47] 2021-07-17 14:43:49,903 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | 
[2021-07-17 10:44:47] 2021-07-17 14:43:49,925 | INFO     | pilot.util.auxiliary             | display_architecture_info | architecture information:
[2021-07-17 10:44:47] 2021-07-17 14:43:50,331 | INFO     | pilot.util.auxiliary             | display_architecture_info | 
[2021-07-17 10:44:47] LSB Version:	:core-4.1-amd64:core-4.1-noarch
[2021-07-17 10:44:47] Distributor ID:	CentOS
[2021-07-17 10:44:47] Description:	CentOS Linux release 7.8.2003 (Core)
[2021-07-17 10:44:47] Release:	7.8.2003
[2021-07-17 10:44:47] Codename:	Core
[2021-07-17 10:44:47] 2021-07-17 14:43:50,332 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ****************************************
[2021-07-17 10:44:47] 2021-07-17 14:43:50,836 | DEBUG    | pilot.util.monitoring            | check_local_space         | checking local space on /var/lib/boinc-client/slots/25
[2021-07-17 10:44:47] 2021-07-17 14:43:51,273 | INFO     | pilot.util.monitoring            | check_local_space         | sufficient remaining disk space (45060456448 B)
[2021-07-17 10:44:47] 2021-07-17 14:43:51,275 | WARNING  | pilot.control.job                | proceed_with_getjob       | since timefloor is set to 0, pilot was only allowed to run one job
[2021-07-17 10:44:47] 2021-07-17 14:43:51,276 | DEBUG    | pilot.control.job                | retrieve                  | will not set job_aborted yet
[2021-07-17 10:44:47] 2021-07-17 14:43:51,277 | WARNING  | pilot.control.monitor            | control                   | aborting monitor loop since graceful_stop has been set
[2021-07-17 10:44:47] 2021-07-17 14:43:51,277 | DEBUG    | pilot.control.job                | retrieve                  | [job] retrieve thread has finished
[2021-07-17 10:44:47] 2021-07-17 14:43:51,278 | INFO     | pilot.control.monitor            | control                   | [monitor] control thread has ended
[2021-07-17 10:44:47] 2021-07-17 14:43:51,340 | DEBUG    | pilot.control.payload            | validate_pre              | will not set job_aborted yet
[2021-07-17 10:44:47] 2021-07-17 14:43:51,341 | INFO     | pilot.control.payload            | validate_pre              | [payload] validate_pre thread has finished
[2021-07-17 10:44:47] 2021-07-17 14:43:51,669 | DEBUG    | pilot.control.payload            | execute_payloads          | will not set job_aborted yet
[2021-07-17 10:44:47] 2021-07-17 14:43:51,671 | INFO     | pilot.control.payload            | execute_payloads          | [payload] execute_payloads thread has finished
[2021-07-17 10:44:47] 2021-07-17 14:43:52,020 | DEBUG    | pilot.control.data               | control                   | data control ending since graceful_stop has been set
[2021-07-17 10:44:47] 2021-07-17 14:43:52,022 | DEBUG    | pilot.control.data               | control                   | will not set job_aborted yet
[2021-07-17 10:44:47] 2021-07-17 14:43:52,023 | DEBUG    | pilot.control.data               | control                   | [data] control thread has finished
[2021-07-17 10:44:47] 2021-07-17 14:43:52,031 | DEBUG    | pilot.control.payload            | control                   | payload control ending since graceful_stop has been set
[2021-07-17 10:44:47] 2021-07-17 14:43:52,033 | DEBUG    | pilot.control.payload            | control                   | will not set job_aborted yet
[2021-07-17 10:44:47] 2021-07-17 14:43:52,034 | DEBUG    | pilot.control.payload            | control                   | [payload] control thread has finished
[2021-07-17 10:44:47] 2021-07-17 14:43:52,129 | DEBUG    | pilot.control.payload            | failed_post               | will not set job_aborted yet
[2021-07-17 10:44:47] 2021-07-17 14:43:52,131 | INFO     | pilot.control.payload            | failed_post               | [payload] failed_post thread has finished
[2021-07-17 10:44:47] 2021-07-17 14:43:52,313 | DEBUG    | pilot.control.job                | create_data_payload       | will not set job_aborted yet
[2021-07-17 10:44:47] 2021-07-17 14:43:52,314 | DEBUG    | pilot.control.job                | create_data_payload       | [job] create_data_payload thread has finished
[2021-07-17 10:44:47] 2021-07-17 14:43:52,314 | DEBUG    | pilot.control.job                | validate                  | will not set job_aborted yet
[2021-07-17 10:44:47] 2021-07-17 14:43:52,316 | DEBUG    | pilot.control.job                | validate                  | [job] validate thread has finished
[2021-07-17 10:44:47] 2021-07-17 14:43:52,361 | DEBUG    | pilot.control.data               | copytool_in               | will not set job_aborted yet
[2021-07-17 10:44:47] 2021-07-17 14:43:52,363 | DEBUG    | pilot.control.data               | copytool_in               | [data] copytool_in thread has finished
[2021-07-17 10:44:47] 2021-07-17 14:43:52,521 | WARNING  | pilot.util.common                | should_abort              | job:queue_monitor:received graceful stop - abort after this iteration
[2021-07-17 10:44:47] 2021-07-17 14:43:52,522 | DEBUG    | pilot.control.job                | queue_monitor             | will not set job_aborted yet
[2021-07-17 10:44:47] 2021-07-17 14:43:52,523 | DEBUG    | pilot.control.job                | queue_monitor             | [job] queue monitor thread has finished
[2021-07-17 10:44:47] 2021-07-17 14:43:52,527 | DEBUG    | pilot.control.job                | control                   | job control ending since graceful_stop has been set
[2021-07-17 10:44:47] 2021-07-17 14:43:52,528 | DEBUG    | pilot.control.job                | control                   | will not set job_aborted yet
[2021-07-17 10:44:47] 2021-07-17 14:43:52,529 | DEBUG    | pilot.control.job                | control                   | [job] control thread has finished
[2021-07-17 10:44:47] 2021-07-17 14:43:52,562 | DEBUG    | pilot.control.payload            | validate_post             | will not set job_aborted yet
[2021-07-17 10:44:47] 2021-07-17 14:43:52,565 | INFO     | pilot.control.payload            | validate_post             | [payload] validate_post thread has finished
[2021-07-17 10:44:47] 2021-07-17 14:43:52,633 | WARNING  | pilot.util.common                | should_abort              | data:copytool_out:received graceful stop - abort after this iteration
[2021-07-17 10:44:47] 2021-07-17 14:43:52,824 | WARNING  | pilot.util.common                | should_abort              | data:queue_monitoring:received graceful stop - abort after this iteration
[2021-07-17 10:44:47] 2021-07-17 14:43:53,635 | DEBUG    | pilot.control.data               | copytool_out              | will not set job_aborted yet
[2021-07-17 10:44:47] 2021-07-17 14:43:53,635 | DEBUG    | pilot.control.data               | copytool_out              | [data] copytool_out thread has finished
[2021-07-17 10:44:47] 2021-07-17 14:43:55,826 | DEBUG    | pilot.control.data               | queue_monitoring          | will not set job_aborted yet
[2021-07-17 10:44:47] 2021-07-17 14:43:55,827 | DEBUG    | pilot.control.data               | queue_monitoring          | [data] queue_monitor thread has finished
[2021-07-17 10:44:47] 2021-07-17 14:44:46,368 | WARNING  | pilot.control.job                | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 62 s)
[2021-07-17 10:44:47] 2021-07-17 14:44:46,369 | DEBUG    | pilot.util.processes             | threads_aborted           | aborting since the last relevant thread is about to finish
[2021-07-17 10:44:47] 2021-07-17 14:44:46,369 | DEBUG    | pilot.control.job                | job_monitor               | will proceed to set job_aborted
[2021-07-17 10:44:47] 2021-07-17 14:44:46,369 | DEBUG    | pilot.control.job                | job_monitor               | [job] job monitor thread has finished
[2021-07-17 10:44:47] 2021-07-17 14:44:46,644 | INFO     | pilot.workflow.generic           | run                       | end of generic workflow (traces error code: 0)
[2021-07-17 10:44:47] 2021-07-17 14:44:46,645 | INFO     | root                             | wrap_up                   | traces error code: 0
[2021-07-17 10:44:47] 2021-07-17 14:44:46,645 | INFO     | root                             | wrap_up                   | pilot has finished
[2021-07-17 10:44:47] 2021-07-17 14:44:46,790 [wrapper] ==== pilot stdout END ====
[2021-07-17 10:44:47] 2021-07-17 14:44:46,817 [wrapper] ==== wrapper stdout RESUME ====
[2021-07-17 10:44:47] 2021-07-17 14:44:46,826 [wrapper] Pilot exit status: 0
[2021-07-17 10:44:47] 2021-07-17 14:44:46,981 [wrapper] pandaids: 5122763453
[2021-07-17 10:44:47] 2021-07-17 14:44:47,003 [wrapper] apfmon messages muted
[2021-07-17 10:44:47] 2021-07-17 14:44:47,014 [wrapper] Test setup, not cleaning
[2021-07-17 10:44:47] 2021-07-17 14:44:47,028 [wrapper] ==== wrapper stdout END ====
[2021-07-17 10:44:47] 2021-07-17 14:44:47,039 [wrapper] ==== wrapper stderr END ====
[2021-07-17 10:44:47] 2021-07-17 14:44:47,072 [wrapper] wrapperexiting ec=0, duration=3591
[2021-07-17 10:44:47] 2021-07-17 14:44:47,082 [wrapper] apfmon messages muted
[2021-07-17 10:44:47]  *** Error codes and diagnostics ***
[2021-07-17 10:44:47]     "exeErrorCode": 0,
[2021-07-17 10:44:47]     "exeErrorDiag": "",
[2021-07-17 10:44:47]     "pilotErrorCode": 1305,
[2021-07-17 10:44:47]     "pilotErrorDiag": "Failed to execute payload",
[2021-07-17 10:44:47]  *** Listing of results directory ***
[2021-07-17 10:44:47] total 41600
[2021-07-17 10:44:47] -rw-r--r-- 1 boinc boinc   343058 Jul 16 10:22 pilot2.tar.gz
[2021-07-17 10:44:47] -rwx------ 1 boinc boinc    20589 Jul 17 09:07 runpilot2-wrapper.sh
[2021-07-17 10:44:47] -rw-r--r-- 1 boinc boinc     3214 Jul 17 09:07 queuedata.json
[2021-07-17 10:44:47] -rw-r--r-- 1 boinc boinc      107 Jul 17 09:44 wrapper_26015_x86_64-pc-linux-gnu
[2021-07-17 10:44:47] -rwxr-xr-x 1 boinc boinc     6966 Jul 17 09:44 run_atlas
[2021-07-17 10:44:47] -rw-r--r-- 1 boinc boinc      112 Jul 17 09:44 job.xml
[2021-07-17 10:44:47] -rw-r--r-- 1 boinc boinc     6188 Jul 17 09:44 init_data.xml
[2021-07-17 10:44:47] drwxrwx--x 2 boinc boinc     4096 Jul 17 09:44 shared
[2021-07-17 10:44:47] -rw-r--r-- 1 boinc boinc        0 Jul 17 09:44 boinc_lockfile
[2021-07-17 10:44:47] -rw-r--r-- 1 boinc boinc    16565 Jul 17 09:44 start_atlas.sh
[2021-07-17 10:44:47] -rw-r--r-- 1 boinc boinc   352953 Jul 17 09:44 input.tar.gz
[2021-07-17 10:44:47] -rw-r--r-- 1 boinc boinc 37498453 Jul 17 09:44 EVNT.04972714._000025.pool.root.1
[2021-07-17 10:44:47] -rw-r--r-- 1 boinc boinc     2594 Jul 17 09:44 pandaJob.out
[2021-07-17 10:44:47] -rw------- 1 boinc boinc  1068233 Jul 17 09:46 agis_schedconf.cvmfs.json
[2021-07-17 10:44:47] -rw------- 1 boinc boinc  1967101 Jul 17 09:46 cric_ddmendpoints.json
[2021-07-17 10:44:47] drwx------ 4 boinc boinc     4096 Jul 17 09:46 pilot2
[2021-07-17 10:44:47] -rw-r--r-- 1 boinc boinc      534 Jul 17 10:41 boinc_task_state.xml
[2021-07-17 10:44:47] -rw------- 1 boinc boinc     1016 Jul 17 10:41 memory_monitor_summary.json
[2021-07-17 10:44:47] -rw------- 1 boinc boinc   190568 Jul 17 10:41 77a10780-e87b-4acc-9b16-d8c743f9c173_2641.1.job.log.tgz
[2021-07-17 10:44:47] -rw------- 1 boinc boinc     8742 Jul 17 10:43 heartbeat.json
[2021-07-17 10:44:47] -rw-r--r-- 1 boinc boinc       25 Jul 17 10:44 wrapper_checkpoint.txt
[2021-07-17 10:44:47] -rw-r--r-- 1 boinc boinc     8192 Jul 17 10:44 boinc_mmap_file
[2021-07-17 10:44:47] -rw------- 1 boinc boinc     7518 Jul 17 10:44 pilotlog.txt
[2021-07-17 10:44:47] -rw------- 1 boinc boinc   385607 Jul 17 10:44 77a10780-e87b-4acc-9b16-d8c743f9c173_2641.1.job.log
[2021-07-17 10:44:47] -rw------- 1 boinc boinc      261 Jul 17 10:44 output.list
[2021-07-17 10:44:47] -rw-r--r-- 1 boinc boinc      683 Jul 17 10:44 runtime_log
[2021-07-17 10:44:47] -rw------- 1 boinc boinc   593920 Jul 17 10:44 result.tar.gz
[2021-07-17 10:44:47] -rw-r--r-- 1 boinc boinc     8827 Jul 17 10:44 runtime_log.err
[2021-07-17 10:44:47] -rw------- 1 boinc boinc      564 Jul 17 10:44 ChxKDmHDzOzn7Olcko1bjSoqABFKDmABFKDmumdXDmS5FKDmKgRtTm.diag
[2021-07-17 10:44:47] -rw-r--r-- 1 boinc boinc    30775 Jul 17 10:44 stderr.txt
[2021-07-17 10:44:47] No HITS result produced
[2021-07-17 10:44:47]  *** Contents of shared directory: ***
[2021-07-17 10:44:47] total 37568
[2021-07-17 10:44:47] -rw-r--r-- 1 boinc boinc 37498453 Jul 17 09:44 ATLAS.root_0
[2021-07-17 10:44:47] -rw-r--r-- 1 boinc boinc   352953 Jul 17 09:44 input.tar.gz
[2021-07-17 10:44:47] -rw-r--r-- 1 boinc boinc    16565 Jul 17 09:44 start_atlas.sh
[2021-07-17 10:44:47] -rw------- 1 boinc boinc   593920 Jul 17 10:44 result.tar.gz
10:44:49 (70564): run_atlas exited; CPU time 1058.055376
10:44:49 (70564): called boinc_finish(0)

</stderr_txt>
]]>


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