Name | cHwLDmbN0Ozn7Olcko1bjSoqABFKDmABFKDmumdXDmY5FKDmnmqnXm_0 |
Workunit | 2105787 |
Created | 17 Jul 2021, 14:21:56 UTC |
Sent | 17 Jul 2021, 14:28:54 UTC |
Report deadline | 24 Jul 2021, 14:28:54 UTC |
Received | 17 Jul 2021, 15:46:00 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 4357 |
Run time | 1 hours 10 min 15 sec |
CPU time | 23 min 10 sec |
Validate state | Valid |
Credit | 15.24 |
Device peak FLOPS | 3.04 GFLOPS |
Application version | ATLAS Simulation v1.04 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.45 GB |
Peak swap size | 30.45 GB |
Peak disk usage | 80.26 MB |
<core_client_version>7.9.3</core_client_version> <![CDATA[ <stderr_txt> 10:29:18 (149563): wrapper (7.7.26015): starting 10:29:18 (149563): wrapper: running run_atlas (--nthreads 1) [2021-07-17 10:29:18] Arguments: --nthreads 1 [2021-07-17 10:29:18] Threads: 1 [2021-07-17 10:29:18] Checking for CVMFS [2021-07-17 10:29:20] Probing /cvmfs/atlas.cern.ch... OK [2021-07-17 10:29:21] Probing /cvmfs/atlas-condb.cern.ch... OK [2021-07-17 10:29:21] Running cvmfs_config stat atlas.cern.ch [2021-07-17 10:29:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2021-07-17 10:29:22] 2.9.0.0 36149 120 55300 88543 3 63 3248870 4194304 1316 130560 0 279319 99.053 359495 1646 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 0 [2021-07-17 10:29:22] CVMFS is ok [2021-07-17 10:29:22] Efficiency of ATLAS tasks can be improved by the following measure(s): [2021-07-17 10:29:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io. [2021-07-17 10:29:22] Small home clusters do not require a local http proxy but it is suggested if [2021-07-17 10:29:22] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks. [2021-07-17 10:29:22] Further information can be found at the LHC@home message board. [2021-07-17 10:29:22] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2021-07-17 10:29:22] Checking for singularity binary... [2021-07-17 10:29:22] Using singularity found in PATH at /usr/local/bin/singularity [2021-07-17 10:29:22] Running /usr/local/bin/singularity --version [2021-07-17 10:29:22] singularity version 3.7.2+10-ga969f0f8c [2021-07-17 10:29:22] Checking singularity works with /usr/local/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2021-07-17 10:29:22] E5-2670 [2021-07-17 10:29:22] Singularity works [2021-07-17 10:29:22] Starting ATLAS job with PandaID=5122846118 [2021-07-17 10:29:22] Running command: /usr/local/bin/singularity exec --pwd /var/lib/boinc-client/slots/24 -B /cvmfs,/var /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2021-07-17 11:39:30] *** The last 200 lines of the pilot log: *** [2021-07-17 11:39:30] "reportVersion": "1.0.0", [2021-07-17 11:39:30] "resource": { [2021-07-17 11:39:30] "cpuUnit": "seconds", [2021-07-17 11:39:30] "externalsCpuTime": 22, [2021-07-17 11:39:30] "memUnit": "kB", [2021-07-17 11:39:30] "transformCpuTime": 11, [2021-07-17 11:39:30] "wallTime": 3904 [2021-07-17 11:39:30] } [2021-07-17 11:39:30] } [2021-07-17 11:39:30] 2021-07-17 15:38:35,826 | DEBUG | pilot.user.atlas.common | update_server | no need to update logstash for this job [2021-07-17 11:39:30] 2021-07-17 15:38:35,826 | INFO | pilot.control.job | send_state | pilot will not update the server (heartbeat message will be written to file) [2021-07-17 11:39:30] 2021-07-17 15:38:35,826 | INFO | pilot.control.job | send_state | job 5122846118 has finished - writing final server update [2021-07-17 11:39:30] 2021-07-17 15:38:35,827 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics_string | job definition core count: 1 [2021-07-17 11:39:30] 2021-07-17 15:38:35,827 | WARNING | pilot.user.atlas.common | get_executor_dictionary | no such key: executor [2021-07-17 11:39:30] 2021-07-17 15:38:35,827 | WARNING | pilot.user.atlas.common | get_executor_dictionary | no such key: executor [2021-07-17 11:39:30] 2021-07-17 15:38:35,827 | INFO | pilot.user.atlas.jobmetrics | get_job_metrics_string | will not add max space = -36484964 B to job metrics [2021-07-17 11:39:30] 2021-07-17 15:38:35,829 | DEBUG | pilot.api.analytics | get_fitted_data | removing tails from data to be fitted [2021-07-17 11:39:30] 2021-07-17 15:38:35,829 | INFO | pilot.api.analytics | get_fitted_data | fitting pss+swap vs Time [2021-07-17 11:39:30] 2021-07-17 15:38:35,830 | INFO | pilot.api.analytics | get_fitted_data | current memory leak: 270.81 B/s (using 58 data points, chi2=1775022) [2021-07-17 11:39:30] 2021-07-17 15:38:35,830 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics | job metrics="actualCoreCount=6 nEvents=2 leak=270.81 chi2=1775022 eventnumber=4001" [2021-07-17 11:39:30] 2021-07-17 15:38:35,830 | INFO | pilot.control.job | get_data_structure | mean actualcorecount: 6.740741 [2021-07-17 11:39:30] 2021-07-17 15:38:35,830 | INFO | pilot.control.job | get_data_structure | total number of processed events: 2 (read) [2021-07-17 11:39:30] 2021-07-17 15:38:35,853 | INFO | pilot.util.container | execute | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2021-07-17 11:39:30] 2021-07-17 15:38:35,927 | INFO | pilot.user.atlas.utilities | get_memory_values | using path: /var/lib/boinc-client/slots/24/PanDA_Pilot-5122846118/memory_monitor_summary.json (trf n [2021-07-17 11:39:30] 2021-07-17 15:38:35,930 | DEBUG | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'Avg': {'nprocs': 4.03, 'nthreads': 5.0, 'pss': 773374.0, 'rchar': 76557.0, 'rea [2021-07-17 11:39:30] 2021-07-17 15:38:35,930 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard info from prmon json [2021-07-17 11:39:30] 2021-07-17 15:38:35,930 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard memory fields from prmon json [2021-07-17 11:39:30] 2021-07-17 15:38:35,930 | INFO | pilot.util.timing | timing_report | .............................. [2021-07-17 11:39:30] 2021-07-17 15:38:35,930 | INFO | pilot.util.timing | timing_report | . Timing measurements: [2021-07-17 11:39:30] 2021-07-17 15:38:35,931 | INFO | pilot.util.timing | timing_report | . get job = 0 s [2021-07-17 11:39:30] 2021-07-17 15:38:35,931 | INFO | pilot.util.timing | timing_report | . initial setup = 1 s [2021-07-17 11:39:30] 2021-07-17 15:38:35,931 | INFO | pilot.util.timing | timing_report | . payload setup = 53 s [2021-07-17 11:39:30] 2021-07-17 15:38:35,931 | INFO | pilot.util.timing | timing_report | . total setup = 54 s [2021-07-17 11:39:30] 2021-07-17 15:38:35,931 | INFO | pilot.util.timing | timing_report | . stage-in = 0 s [2021-07-17 11:39:30] 2021-07-17 15:38:35,931 | INFO | pilot.util.timing | timing_report | . payload execution = 3983 s [2021-07-17 11:39:30] 2021-07-17 15:38:35,931 | INFO | pilot.util.timing | timing_report | . stage-out = 1 s [2021-07-17 11:39:30] 2021-07-17 15:38:35,931 | INFO | pilot.util.timing | timing_report | .............................. [2021-07-17 11:39:30] 2021-07-17 15:38:35,932 | DEBUG | pilot.control.job | send_state | is_harvester_mode(args) : False [2021-07-17 11:39:30] 2021-07-17 15:38:35,933 | DEBUG | pilot.control.job | write_heartbeat_to_file | heartbeat dictionary: {'jobId': '5122846118', 'state': 'finished', 'timestamp': '2021-07-17T11:38:35 [2021-07-17 11:39:30] 2021-07-17 15:38:35,933 | DEBUG | pilot.control.job | write_heartbeat_to_file | wrote heartbeat to file /var/lib/boinc-client/slots/24/heartbeat.json [2021-07-17 11:39:30] 2021-07-17 15:38:35,934 | DEBUG | pilot.control.job | queue_monitor | job 5122846118 was dequeued from the monitored payloads queue [2021-07-17 11:39:30] 2021-07-17 15:38:36,121 | DEBUG | pilot.control.job | queue_monitor | tmp job object deleted [2021-07-17 11:39:30] 2021-07-17 15:38:36,390 | INFO | pilot.control.job | make_job_report | [2021-07-17 11:39:30] 2021-07-17 15:38:36,391 | INFO | pilot.control.job | make_job_report | job summary report [2021-07-17 11:39:30] 2021-07-17 15:38:36,391 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2021-07-17 11:39:30] 2021-07-17 15:38:36,391 | INFO | pilot.control.job | make_job_report | PanDA job id: 5122846118 [2021-07-17 11:39:30] 2021-07-17 15:38:36,391 | INFO | pilot.control.job | make_job_report | task id: NULL [2021-07-17 11:39:30] 2021-07-17 15:38:36,391 | INFO | pilot.control.job | make_job_report | errors: (none) [2021-07-17 11:39:30] 2021-07-17 15:38:36,392 | INFO | pilot.control.job | make_job_report | status: LOG_TRANSFER = DONE [2021-07-17 11:39:30] 2021-07-17 15:38:36,392 | INFO | pilot.control.job | make_job_report | pilot state: finished [2021-07-17 11:39:30] 2021-07-17 15:38:36,392 | INFO | pilot.control.job | make_job_report | transexitcode: 0 [2021-07-17 11:39:30] 2021-07-17 15:38:36,392 | INFO | pilot.control.job | make_job_report | exeerrorcode: 0 [2021-07-17 11:39:30] 2021-07-17 15:38:36,392 | INFO | pilot.control.job | make_job_report | exeerrordiag: [2021-07-17 11:39:30] 2021-07-17 15:38:36,393 | INFO | pilot.control.job | make_job_report | exitcode: 0 [2021-07-17 11:39:30] 2021-07-17 15:38:36,393 | INFO | pilot.control.job | make_job_report | exitmsg: OK [2021-07-17 11:39:30] 2021-07-17 15:38:36,393 | INFO | pilot.control.job | make_job_report | cpuconsumptiontime: 1458 s [2021-07-17 11:39:30] 2021-07-17 15:38:36,393 | INFO | pilot.control.job | make_job_report | nevents: 2 [2021-07-17 11:39:30] 2021-07-17 15:38:36,393 | INFO | pilot.control.job | make_job_report | neventsw: 0 [2021-07-17 11:39:30] 2021-07-17 15:38:36,393 | INFO | pilot.control.job | make_job_report | pid: 14058 [2021-07-17 11:39:30] 2021-07-17 15:38:36,393 | INFO | pilot.control.job | make_job_report | pgrp: 14058 [2021-07-17 11:39:30] 2021-07-17 15:38:36,393 | INFO | pilot.control.job | make_job_report | corecount: 1 [2021-07-17 11:39:30] 2021-07-17 15:38:36,394 | INFO | pilot.control.job | make_job_report | event service: False [2021-07-17 11:39:30] 2021-07-17 15:38:36,394 | INFO | pilot.control.job | make_job_report | sizes: {24265353: 3866203, 24265354: 3866368, 24265365: 3866368, 24269406: 3889078, 24269408: 389860 [2021-07-17 11:39:30] 2021-07-17 15:38:36,394 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2021-07-17 11:39:30] 2021-07-17 15:38:36,394 | INFO | pilot.control.job | make_job_report | [2021-07-17 11:39:30] 2021-07-17 15:38:36,394 | DEBUG | pilot.control.job | has_job_completed | ls -lF /var/lib/boinc-client/slots/24: [2021-07-17 11:39:30] [2021-07-17 11:39:30] 2021-07-17 15:38:36,394 | INFO | pilot.util.container | execute | executing command: ls -lF /var/lib/boinc-client/slots/24 [2021-07-17 11:39:30] 2021-07-17 15:38:36,427 | DEBUG | pilot.control.job | has_job_completed | total 45496 [2021-07-17 11:39:30] -rw------- 1 boinc boinc 1068209 Jul 17 10:30 agis_schedconf.cvmfs.json [2021-07-17 11:39:30] -rw-r--r-- 1 boinc boinc 0 Jul 17 10:29 boinc_lockfile [2021-07-17 11:39:30] -rw-r--r-- 1 boinc boinc 8192 Jul 17 11:38 boinc_mmap_file [2021-07-17 11:39:30] -rw-r--r-- 1 boinc boinc 535 Jul 17 11:37 boinc_task_state.xml [2021-07-17 11:39:30] -rw------- 1 boinc boinc 130 Jul 17 10:29 cHwLDmbN0Ozn7Olcko1bjSoqABFKDmABFKDmumdXDmY5FKDmnmqnXm.diag [2021-07-17 11:39:30] -rw------- 1 boinc boinc 1967101 Jul 17 10:30 cric_ddmendpoints.json [2021-07-17 11:39:30] -rw-r--r-- 1 boinc boinc 37498453 Jul 17 10:29 EVNT.04972714._000025.pool.root.1 [2021-07-17 11:39:30] -rw------- 1 boinc boinc 314227 Jul 17 11:38 fa0dbb4e-c7d2-42ce-af64-df0631b559dd_50723.1.job.log [2021-07-17 11:39:30] -rw------- 1 boinc boinc 182509 Jul 17 11:38 fa0dbb4e-c7d2-42ce-af64-df0631b559dd_50723.1.job.log.tgz [2021-07-17 11:39:30] -rw------- 1 boinc boinc 7098 Jul 17 11:38 heartbeat.json [2021-07-17 11:39:30] -rw-r--r-- 1 boinc boinc 6188 Jul 17 10:29 init_data.xml [2021-07-17 11:39:30] -rw-r--r-- 1 boinc boinc 344139 Jul 17 10:29 input.tar.gz [2021-07-17 11:39:30] -rw-r--r-- 1 boinc boinc 112 Jul 17 10:29 job.xml [2021-07-17 11:39:30] -rw------- 1 boinc boinc 1010 Jul 17 11:38 memory_monitor_summary.json [2021-07-17 11:39:30] -rw------- 1 boinc boinc 4412364 Jul 17 11:37 output.1.fa0dbb4e-c7d2-42ce-af64-df0631b559dd_50723.pool.root [2021-07-17 11:39:30] -rw------- 1 boinc boinc 536 Jul 17 11:38 output.list [2021-07-17 11:39:30] -rw-r--r-- 1 boinc boinc 2650 Jul 17 10:29 pandaJob.out [2021-07-17 11:39:30] drwxrwx--- 2 boinc boinc 4096 Jul 17 11:38 PanDA_Pilot-5122846118/ [2021-07-17 11:39:30] drwx------ 4 boinc boinc 4096 Jul 17 10:30 pilot2/ [2021-07-17 11:39:30] -rw-r--r-- 1 boinc boinc 334707 Jul 17 09:22 pilot2.tar.gz [2021-07-17 11:39:30] -rw------- 1 boinc boinc 295258 Jul 17 11:38 pilotlog.txt [2021-07-17 11:39:30] -rw-r--r-- 1 boinc boinc 3214 Jul 17 10:21 queuedata.json [2021-07-17 11:39:30] -rwxr-xr-x 1 boinc boinc 6966 Jul 17 10:29 run_atlas* [2021-07-17 11:39:30] -rwx------ 1 boinc boinc 20591 Jul 17 10:21 runpilot2-wrapper.sh* [2021-07-17 11:39:30] -rw-r--r-- 1 boinc boinc 407 Jul 17 10:29 runtime_log [2021-07-17 11:39:30] -rw-r--r-- 1 boinc boinc 5574 Jul 17 10:29 runtime_log.err [2021-07-17 11:39:30] drwxrwx--x 2 boinc boinc 4096 Jul 17 10:29 shared/ [2021-07-17 11:39:30] -rw-r--r-- 1 boinc boinc 16551 Jul 17 10:29 start_atlas.sh [2021-07-17 11:39:30] -rw-r--r-- 1 boinc boinc 2213 Jul 17 10:29 stderr.txt [2021-07-17 11:39:30] -rw-r--r-- 1 boinc boinc 107 Jul 17 10:29 wrapper_26015_x86_64-pc-linux-gnu [2021-07-17 11:39:30] -rw-r--r-- 1 boinc boinc 26 Jul 17 11:38 wrapper_checkpoint.txt [2021-07-17 11:39:30] 2021-07-17 15:38:36,428 | INFO | pilot.util.queuehandling | queue_report | queue jobs has 0 job(s) [2021-07-17 11:39:30] 2021-07-17 15:38:36,428 | INFO | pilot.util.queuehandling | queue_report | queue payloads has 0 job(s) [2021-07-17 11:39:30] 2021-07-17 15:38:36,428 | INFO | pilot.util.queuehandling | queue_report | queue data_in has 0 job(s) [2021-07-17 11:39:30] 2021-07-17 15:38:36,428 | INFO | pilot.util.queuehandling | queue_report | queue data_out has 0 job(s) [2021-07-17 11:39:30] 2021-07-17 15:38:36,428 | INFO | pilot.util.queuehandling | queue_report | queue current_data_in has 0 job(s) [2021-07-17 11:39:30] 2021-07-17 15:38:36,428 | INFO | pilot.util.queuehandling | queue_report | queue validated_jobs has 0 job(s) [2021-07-17 11:39:30] 2021-07-17 15:38:36,428 | INFO | pilot.util.queuehandling | queue_report | queue validated_payloads has 0 job(s) [2021-07-17 11:39:30] 2021-07-17 15:38:36,429 | INFO | pilot.util.queuehandling | queue_report | queue monitored_payloads has 0 job(s) [2021-07-17 11:39:30] 2021-07-17 15:38:36,429 | INFO | pilot.util.queuehandling | queue_report | queue finished_jobs has 0 job(s) [2021-07-17 11:39:30] 2021-07-17 15:38:36,429 | INFO | pilot.util.queuehandling | queue_report | queue finished_payloads has 0 job(s) [2021-07-17 11:39:30] 2021-07-17 15:38:36,429 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_in has 1 job(s) [2021-07-17 11:39:30] 2021-07-17 15:38:36,429 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_out has 0 job(s) [2021-07-17 11:39:30] 2021-07-17 15:38:36,429 | INFO | pilot.util.queuehandling | queue_report | queue failed_jobs has 0 job(s) [2021-07-17 11:39:30] 2021-07-17 15:38:36,429 | INFO | pilot.util.queuehandling | queue_report | queue failed_payloads has 0 job(s) [2021-07-17 11:39:30] 2021-07-17 15:38:36,429 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_in has 0 job(s) [2021-07-17 11:39:30] 2021-07-17 15:38:36,429 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_out has 0 job(s) [2021-07-17 11:39:30] 2021-07-17 15:38:36,429 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobs has 0 job(s) [2021-07-17 11:39:30] 2021-07-17 15:38:36,430 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s) [2021-07-17 11:39:30] 2021-07-17 15:38:36,430 | INFO | pilot.control.job | has_job_completed | job 5122846118 has completed (purged errors) [2021-07-17 11:39:30] 2021-07-17 15:38:36,430 | INFO | pilot.util.processes | cleanup | overall cleanup function is called [2021-07-17 11:39:30] 2021-07-17 15:38:36,433 | DEBUG | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc-client/slots/24/PanDA_Pilot-5122846118 [2021-07-17 11:39:30] 2021-07-17 15:38:37,436 | INFO | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [14058] [2021-07-17 11:39:30] 2021-07-17 15:38:37,437 | INFO | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 14058 [2021-07-17 11:39:30] 2021-07-17 15:38:37,437 | INFO | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes [2021-07-17 11:39:30] 2021-07-17 15:38:38,440 | INFO | pilot.util.processes | cleanup | collected zombie processes [2021-07-17 11:39:30] 2021-07-17 15:38:38,440 | INFO | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=14058 [2021-07-17 11:39:30] 2021-07-17 15:38:38,605 | INFO | pilot.util.processes | kill_processes | process IDs to be killed: [14058] (in reverse order) [2021-07-17 11:39:30] 2021-07-17 15:38:38,729 | WARNING | pilot.util.processes | kill_processes | found no corresponding commands to process id(s) [2021-07-17 11:39:30] 2021-07-17 15:38:38,730 | INFO | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs [2021-07-17 11:39:30] 2021-07-17 15:38:38,730 | DEBUG | pilot.util.queuehandling | purge_queue | queue purged [2021-07-17 11:39:30] 2021-07-17 15:38:38,730 | INFO | pilot.control.job | retrieve | ready for new job [2021-07-17 11:39:30] 2021-07-17 15:38:38,730 | INFO | root | retrieve | pilot has finished for previous job - re-establishing logging [2021-07-17 11:39:30] 2021-07-17 15:38:38,731 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2021-07-17 11:39:30] 2021-07-17 15:38:38,731 | INFO | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 2.12.2 (1) *** [2021-07-17 11:39:30] 2021-07-17 15:38:38,731 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2021-07-17 11:39:30] 2021-07-17 15:38:38,732 | INFO | pilot.util.auxiliary | pilot_version_banner | [2021-07-17 11:39:30] 2021-07-17 15:38:38,749 | INFO | pilot.util.auxiliary | display_architecture_info | architecture information: [2021-07-17 11:39:30] 2021-07-17 15:38:39,061 | INFO | pilot.util.auxiliary | display_architecture_info | [2021-07-17 11:39:30] LSB Version: :core-4.1-amd64:core-4.1-noarch [2021-07-17 11:39:30] Distributor ID: CentOS [2021-07-17 11:39:30] Description: CentOS Linux release 7.8.2003 (Core) [2021-07-17 11:39:30] Release: 7.8.2003 [2021-07-17 11:39:30] Codename: Core [2021-07-17 11:39:30] 2021-07-17 15:38:39,061 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2021-07-17 11:39:30] 2021-07-17 15:38:39,562 | DEBUG | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc-client/slots/24 [2021-07-17 11:39:30] 2021-07-17 15:38:39,603 | INFO | pilot.util.monitoring | check_local_space | sufficient remaining disk space (41169190912 B) [2021-07-17 11:39:30] 2021-07-17 15:38:39,604 | WARNING | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job [2021-07-17 11:39:30] 2021-07-17 15:38:39,604 | DEBUG | pilot.control.job | retrieve | will not set job_aborted yet [2021-07-17 11:39:30] 2021-07-17 15:38:39,604 | WARNING | pilot.control.monitor | control | aborting monitor loop since graceful_stop has been set [2021-07-17 11:39:30] 2021-07-17 15:38:39,604 | DEBUG | pilot.control.job | retrieve | [job] retrieve thread has finished [2021-07-17 11:39:30] 2021-07-17 15:38:39,604 | INFO | pilot.control.monitor | control | [monitor] control thread has ended [2021-07-17 11:39:30] 2021-07-17 15:38:39,752 | WARNING | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration [2021-07-17 11:39:30] 2021-07-17 15:38:39,915 | DEBUG | pilot.control.payload | execute_payloads | will not set job_aborted yet [2021-07-17 11:39:30] 2021-07-17 15:38:39,916 | INFO | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished [2021-07-17 11:39:30] 2021-07-17 15:38:39,923 | DEBUG | pilot.control.job | validate | will not set job_aborted yet [2021-07-17 11:39:30] 2021-07-17 15:38:39,924 | DEBUG | pilot.control.job | validate | [job] validate thread has finished [2021-07-17 11:39:30] 2021-07-17 15:38:39,948 | DEBUG | pilot.control.payload | control | payload control ending since graceful_stop has been set [2021-07-17 11:39:30] 2021-07-17 15:38:39,949 | DEBUG | pilot.control.payload | control | will not set job_aborted yet [2021-07-17 11:39:30] 2021-07-17 15:38:39,949 | DEBUG | pilot.control.payload | control | [payload] control thread has finished [2021-07-17 11:39:30] 2021-07-17 15:38:40,013 | DEBUG | pilot.control.job | create_data_payload | will not set job_aborted yet [2021-07-17 11:39:30] 2021-07-17 15:38:40,013 | DEBUG | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished [2021-07-17 11:39:30] 2021-07-17 15:38:40,064 | DEBUG | pilot.control.data | control | data control ending since graceful_stop has been set [2021-07-17 11:39:30] 2021-07-17 15:38:40,065 | DEBUG | pilot.control.data | control | will not set job_aborted yet [2021-07-17 11:39:30] 2021-07-17 15:38:40,065 | DEBUG | pilot.control.data | control | [data] control thread has finished [2021-07-17 11:39:30] 2021-07-17 15:38:40,225 | DEBUG | pilot.control.payload | failed_post | will not set job_aborted yet [2021-07-17 11:39:30] 2021-07-17 15:38:40,226 | INFO | pilot.control.payload | failed_post | [payload] failed_post thread has finished [2021-07-17 11:39:30] 2021-07-17 15:38:40,564 | DEBUG | pilot.control.payload | validate_post | will not set job_aborted yet [2021-07-17 11:39:30] 2021-07-17 15:38:40,564 | INFO | pilot.control.payload | validate_post | [payload] validate_post thread has finished [2021-07-17 11:39:30] 2021-07-17 15:38:40,621 | DEBUG | pilot.control.payload | validate_pre | will not set job_aborted yet [2021-07-17 11:39:30] 2021-07-17 15:38:40,622 | INFO | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished [2021-07-17 11:39:30] 2021-07-17 15:38:40,753 | DEBUG | pilot.control.data | copytool_out | will not set job_aborted yet [2021-07-17 11:39:30] 2021-07-17 15:38:40,753 | DEBUG | pilot.control.data | copytool_out | [data] copytool_out thread has finished [2021-07-17 11:39:30] 2021-07-17 15:38:40,754 | DEBUG | pilot.control.job | control | job control ending since graceful_stop has been set [2021-07-17 11:39:30] 2021-07-17 15:38:40,755 | DEBUG | pilot.control.job | control | will not set job_aborted yet [2021-07-17 11:39:30] 2021-07-17 15:38:40,755 | DEBUG | pilot.control.job | control | [job] control thread has finished [2021-07-17 11:39:30] 2021-07-17 15:38:40,960 | WARNING | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration [2021-07-17 11:39:30] 2021-07-17 15:38:41,081 | DEBUG | pilot.control.data | copytool_in | will not set job_aborted yet [2021-07-17 11:39:30] 2021-07-17 15:38:41,081 | DEBUG | pilot.control.data | copytool_in | [data] copytool_in thread has finished [2021-07-17 11:39:30] 2021-07-17 15:38:41,128 | WARNING | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration [2021-07-17 11:39:30] 2021-07-17 15:38:41,129 | DEBUG | pilot.control.job | queue_monitor | will not set job_aborted yet [2021-07-17 11:39:30] 2021-07-17 15:38:41,129 | DEBUG | pilot.control.job | queue_monitor | [job] queue monitor thread has finished [2021-07-17 11:39:30] 2021-07-17 15:38:43,961 | DEBUG | pilot.control.data | queue_monitoring | will not set job_aborted yet [2021-07-17 11:39:30] 2021-07-17 15:38:43,963 | DEBUG | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished [2021-07-17 11:39:30] 2021-07-17 15:39:29,578 | WARNING | pilot.control.job | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 72 s) [2021-07-17 11:39:30] 2021-07-17 15:39:29,579 | DEBUG | pilot.util.processes | threads_aborted | aborting since the last relevant thread is about to finish [2021-07-17 11:39:30] 2021-07-17 15:39:29,579 | DEBUG | pilot.control.job | job_monitor | will proceed to set job_aborted [2021-07-17 11:39:30] 2021-07-17 15:39:29,579 | DEBUG | pilot.control.job | job_monitor | [job] job monitor thread has finished [2021-07-17 11:39:30] 2021-07-17 15:39:29,916 | INFO | pilot.workflow.generic | run | end of generic workflow (traces error code: 0) [2021-07-17 11:39:30] 2021-07-17 15:39:29,917 | INFO | root | wrap_up | traces error code: 0 [2021-07-17 11:39:30] 2021-07-17 15:39:29,917 | INFO | root | wrap_up | pilot has finished [2021-07-17 11:39:30] 2021-07-17 15:39:30,050 [wrapper] ==== pilot stdout END ==== [2021-07-17 11:39:30] 2021-07-17 15:39:30,074 [wrapper] ==== wrapper stdout RESUME ==== [2021-07-17 11:39:30] 2021-07-17 15:39:30,098 [wrapper] Pilot exit status: 0 [2021-07-17 11:39:30] 2021-07-17 15:39:30,199 [wrapper] pandaids: 5122846118 [2021-07-17 11:39:30] 2021-07-17 15:39:30,215 [wrapper] apfmon messages muted [2021-07-17 11:39:30] 2021-07-17 15:39:30,223 [wrapper] Test setup, not cleaning [2021-07-17 11:39:30] 2021-07-17 15:39:30,255 [wrapper] ==== wrapper stdout END ==== [2021-07-17 11:39:30] 2021-07-17 15:39:30,284 [wrapper] ==== wrapper stderr END ==== [2021-07-17 11:39:30] 2021-07-17 15:39:30,311 [wrapper] wrapperexiting ec=0, duration=4206 [2021-07-17 11:39:30] 2021-07-17 15:39:30,331 [wrapper] apfmon messages muted [2021-07-17 11:39:30] *** Error codes and diagnostics *** [2021-07-17 11:39:30] "exeErrorCode": 0, [2021-07-17 11:39:30] "exeErrorDiag": "", [2021-07-17 11:39:30] "pilotErrorCode": 0, [2021-07-17 11:39:30] "pilotErrorDiag": "", [2021-07-17 11:39:30] *** Listing of results directory *** [2021-07-17 11:39:30] total 50084 [2021-07-17 11:39:30] -rw-r--r-- 1 boinc boinc 334707 Jul 17 09:22 pilot2.tar.gz [2021-07-17 11:39:30] -rwx------ 1 boinc boinc 20591 Jul 17 10:21 runpilot2-wrapper.sh [2021-07-17 11:39:30] -rw-r--r-- 1 boinc boinc 3214 Jul 17 10:21 queuedata.json [2021-07-17 11:39:30] -rw-r--r-- 1 boinc boinc 107 Jul 17 10:29 wrapper_26015_x86_64-pc-linux-gnu [2021-07-17 11:39:30] -rwxr-xr-x 1 boinc boinc 6966 Jul 17 10:29 run_atlas [2021-07-17 11:39:30] -rw-r--r-- 1 boinc boinc 112 Jul 17 10:29 job.xml [2021-07-17 11:39:30] drwxrwx--x 2 boinc boinc 4096 Jul 17 10:29 shared [2021-07-17 11:39:30] -rw-r--r-- 1 boinc boinc 6188 Jul 17 10:29 init_data.xml [2021-07-17 11:39:30] -rw-r--r-- 1 boinc boinc 0 Jul 17 10:29 boinc_lockfile [2021-07-17 11:39:30] -rw-r--r-- 1 boinc boinc 16551 Jul 17 10:29 start_atlas.sh [2021-07-17 11:39:30] -rw-r--r-- 1 boinc boinc 344139 Jul 17 10:29 input.tar.gz [2021-07-17 11:39:30] -rw-r--r-- 1 boinc boinc 37498453 Jul 17 10:29 EVNT.04972714._000025.pool.root.1 [2021-07-17 11:39:30] -rw-r--r-- 1 boinc boinc 2650 Jul 17 10:29 pandaJob.out [2021-07-17 11:39:30] -rw------- 1 boinc boinc 1068209 Jul 17 10:30 agis_schedconf.cvmfs.json [2021-07-17 11:39:30] -rw------- 1 boinc boinc 1967101 Jul 17 10:30 cric_ddmendpoints.json [2021-07-17 11:39:30] drwx------ 4 boinc boinc 4096 Jul 17 10:30 pilot2 [2021-07-17 11:39:30] -rw------- 1 boinc boinc 4412364 Jul 17 11:37 output.1.fa0dbb4e-c7d2-42ce-af64-df0631b559dd_50723.pool.root [2021-07-17 11:39:30] -rw-r--r-- 1 boinc boinc 535 Jul 17 11:37 boinc_task_state.xml [2021-07-17 11:39:30] -rw------- 1 boinc boinc 1010 Jul 17 11:38 memory_monitor_summary.json [2021-07-17 11:39:30] -rw------- 1 boinc boinc 182509 Jul 17 11:38 fa0dbb4e-c7d2-42ce-af64-df0631b559dd_50723.1.job.log.tgz [2021-07-17 11:39:30] -rw------- 1 boinc boinc 7098 Jul 17 11:38 heartbeat.json [2021-07-17 11:39:30] -rw-r--r-- 1 boinc boinc 8192 Jul 17 11:39 boinc_mmap_file [2021-07-17 11:39:30] -rw-r--r-- 1 boinc boinc 26 Jul 17 11:39 wrapper_checkpoint.txt [2021-07-17 11:39:30] -rw------- 1 boinc boinc 7518 Jul 17 11:39 pilotlog.txt [2021-07-17 11:39:30] -rw------- 1 boinc boinc 329053 Jul 17 11:39 fa0dbb4e-c7d2-42ce-af64-df0631b559dd_50723.1.job.log [2021-07-17 11:39:30] -rw------- 1 boinc boinc 536 Jul 17 11:39 output.list [2021-07-17 11:39:30] -rw-r--r-- 1 boinc boinc 9429 Jul 17 11:39 runtime_log.err [2021-07-17 11:39:30] -rw-r--r-- 1 boinc boinc 748 Jul 17 11:39 runtime_log [2021-07-17 11:39:30] -rw------- 1 boinc boinc 4945920 Jul 17 11:39 result.tar.gz [2021-07-17 11:39:30] -rw------- 1 boinc boinc 563 Jul 17 11:39 cHwLDmbN0Ozn7Olcko1bjSoqABFKDmABFKDmumdXDmY5FKDmnmqnXm.diag [2021-07-17 11:39:30] -rw-r--r-- 1 boinc boinc 29861 Jul 17 11:39 stderr.txt [2021-07-17 11:39:30] HITS file was successfully produced: [2021-07-17 11:39:30] -rw------- 1 boinc boinc 4412364 Jul 17 11:37 shared/HITS.pool.root.1 [2021-07-17 11:39:30] *** Contents of shared directory: *** [2021-07-17 11:39:30] total 46128 [2021-07-17 11:39:30] -rw-r--r-- 1 boinc boinc 37498453 Jul 17 10:29 ATLAS.root_0 [2021-07-17 11:39:30] -rw-r--r-- 1 boinc boinc 16551 Jul 17 10:29 start_atlas.sh [2021-07-17 11:39:30] -rw-r--r-- 1 boinc boinc 344139 Jul 17 10:29 input.tar.gz [2021-07-17 11:39:30] -rw------- 1 boinc boinc 4412364 Jul 17 11:37 HITS.pool.root.1 [2021-07-17 11:39:30] -rw------- 1 boinc boinc 4945920 Jul 17 11:39 result.tar.gz 11:39:32 (149563): run_atlas exited; CPU time 1390.981437 11:39:32 (149563): called boinc_finish(0) </stderr_txt> ]]>
©2024 CERN