Name | 4k4NDmxuTQzn7Olcko1bjSoqABFKDmABFKDmumdXDmKEGKDmlfZXYo_0 |
Workunit | 2108019 |
Created | 21 Jul 2021, 16:06:29 UTC |
Sent | 21 Jul 2021, 16:09:10 UTC |
Report deadline | 28 Jul 2021, 16:09:10 UTC |
Received | 21 Jul 2021, 17:08:39 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 4357 |
Run time | 58 min 16 sec |
CPU time | 37 min 18 sec |
Validate state | Valid |
Credit | 11.60 |
Device peak FLOPS | 3.04 GFLOPS |
Application version | ATLAS Simulation v1.04 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.72 GB |
Peak swap size | 34.43 GB |
Peak disk usage | 86.35 MB |
<core_client_version>7.9.3</core_client_version> <![CDATA[ <stderr_txt> 12:09:38 (70734): wrapper (7.7.26015): starting 12:09:38 (70734): wrapper: running run_atlas (--nthreads 1) [2021-07-21 12:09:38] Arguments: --nthreads 1 [2021-07-21 12:09:38] Threads: 1 [2021-07-21 12:09:38] Checking for CVMFS [2021-07-21 12:09:42] Probing /cvmfs/atlas.cern.ch... OK [2021-07-21 12:09:45] Probing /cvmfs/atlas-condb.cern.ch... OK [2021-07-21 12:09:45] Running cvmfs_config stat atlas.cern.ch [2021-07-21 12:09:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2021-07-21 12:09:46] 2.9.0.0 71504 0 24756 88768 3 1 4054973 4194304 0 130560 0 0 0.000 528 311 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 0 [2021-07-21 12:09:46] CVMFS is ok [2021-07-21 12:09:46] Efficiency of ATLAS tasks can be improved by the following measure(s): [2021-07-21 12:09:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io. [2021-07-21 12:09:46] Small home clusters do not require a local http proxy but it is suggested if [2021-07-21 12:09:46] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks. [2021-07-21 12:09:46] Further information can be found at the LHC@home message board. [2021-07-21 12:09:46] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2021-07-21 12:09:46] Checking for singularity binary... [2021-07-21 12:09:46] Using singularity found in PATH at /usr/local/bin/singularity [2021-07-21 12:09:46] Running /usr/local/bin/singularity --version [2021-07-21 12:09:46] singularity version 3.7.2+10-ga969f0f8c [2021-07-21 12:09:46] Checking singularity works with /usr/local/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2021-07-21 12:09:48] E5-2670 [2021-07-21 12:09:48] Singularity works [2021-07-21 12:09:48] Starting ATLAS job with PandaID=5126905698 [2021-07-21 12:09:48] Running command: /usr/local/bin/singularity exec --pwd /var/lib/boinc-client/slots/37 -B /cvmfs,/var /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2021-07-21 13:08:17] *** The last 200 lines of the pilot log: *** [2021-07-21 13:08:17] "reportVersion": "1.0.0", [2021-07-21 13:08:17] "resource": { [2021-07-21 13:08:17] "cpuUnit": "seconds", [2021-07-21 13:08:17] "externalsCpuTime": 21, [2021-07-21 13:08:17] "memUnit": "kB", [2021-07-21 13:08:17] "transformCpuTime": 6, [2021-07-21 13:08:17] "wallTime": 3209 [2021-07-21 13:08:17] } [2021-07-21 13:08:17] } [2021-07-21 13:08:17] 2021-07-21 17:07:37,384 | DEBUG | pilot.user.atlas.common | update_server | no need to update logstash for this job [2021-07-21 13:08:17] 2021-07-21 17:07:37,384 | INFO | pilot.control.job | send_state | pilot will not update the server (heartbeat message will be written to file) [2021-07-21 13:08:17] 2021-07-21 17:07:37,384 | INFO | pilot.control.job | send_state | job 5126905698 has finished - writing final server update [2021-07-21 13:08:17] 2021-07-21 17:07:37,385 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics_string | job definition core count: 1 [2021-07-21 13:08:17] 2021-07-21 17:07:37,385 | WARNING | pilot.user.atlas.common | get_executor_dictionary | no such key: executor [2021-07-21 13:08:17] 2021-07-21 17:07:37,385 | WARNING | pilot.user.atlas.common | get_executor_dictionary | no such key: executor [2021-07-21 13:08:17] 2021-07-21 17:07:37,385 | INFO | pilot.user.atlas.jobmetrics | get_job_metrics_string | will not add max space = -37257062 B to job metrics [2021-07-21 13:08:17] 2021-07-21 17:07:37,386 | DEBUG | pilot.api.analytics | get_fitted_data | removing tails from data to be fitted [2021-07-21 13:08:17] 2021-07-21 17:07:37,387 | INFO | pilot.api.analytics | get_fitted_data | fitting pss+swap vs Time [2021-07-21 13:08:17] 2021-07-21 17:07:37,388 | INFO | pilot.api.analytics | get_fitted_data | current memory leak: 547.92 B/s (using 47 data points, chi2=1220309) [2021-07-21 13:08:17] 2021-07-21 17:07:37,388 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics | job metrics="actualCoreCount=3 nEvents=2 leak=547.92 chi2=1220309 eventnumber=7001" [2021-07-21 13:08:17] 2021-07-21 17:07:37,388 | INFO | pilot.control.job | get_data_structure | mean actualcorecount: 5.311111 [2021-07-21 13:08:17] 2021-07-21 17:07:37,388 | INFO | pilot.control.job | get_data_structure | total number of processed events: 2 (read) [2021-07-21 13:08:17] 2021-07-21 17:07:37,410 | INFO | pilot.util.container | execute | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2021-07-21 13:08:17] 2021-07-21 17:07:37,469 | INFO | pilot.user.atlas.utilities | get_memory_values | using path: /var/lib/boinc-client/slots/37/PanDA_Pilot-5126905698/memory_monitor_summary.json (trf n [2021-07-21 13:08:17] 2021-07-21 17:07:37,471 | DEBUG | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'Avg': {'nprocs': 3.9619999999999997, 'nthreads': 4.907, 'pss': 1170584.0, 'rcha [2021-07-21 13:08:17] 2021-07-21 17:07:37,472 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard info from prmon json [2021-07-21 13:08:17] 2021-07-21 17:07:37,472 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard memory fields from prmon json [2021-07-21 13:08:17] 2021-07-21 17:07:37,472 | INFO | pilot.util.timing | timing_report | .............................. [2021-07-21 13:08:17] 2021-07-21 17:07:37,472 | INFO | pilot.util.timing | timing_report | . Timing measurements: [2021-07-21 13:08:17] 2021-07-21 17:07:37,472 | INFO | pilot.util.timing | timing_report | . get job = 0 s [2021-07-21 13:08:17] 2021-07-21 17:07:37,472 | INFO | pilot.util.timing | timing_report | . initial setup = 2 s [2021-07-21 13:08:17] 2021-07-21 17:07:37,472 | INFO | pilot.util.timing | timing_report | . payload setup = 51 s [2021-07-21 13:08:17] 2021-07-21 17:07:37,472 | INFO | pilot.util.timing | timing_report | . total setup = 53 s [2021-07-21 13:08:17] 2021-07-21 17:07:37,472 | INFO | pilot.util.timing | timing_report | . stage-in = 0 s [2021-07-21 13:08:17] 2021-07-21 17:07:37,473 | INFO | pilot.util.timing | timing_report | . payload execution = 3319 s [2021-07-21 13:08:17] 2021-07-21 17:07:37,473 | INFO | pilot.util.timing | timing_report | . stage-out = 1 s [2021-07-21 13:08:17] 2021-07-21 17:07:37,473 | INFO | pilot.util.timing | timing_report | .............................. [2021-07-21 13:08:17] 2021-07-21 17:07:37,473 | DEBUG | pilot.control.job | send_state | is_harvester_mode(args) : False [2021-07-21 13:08:17] 2021-07-21 17:07:37,474 | DEBUG | pilot.control.job | write_heartbeat_to_file | heartbeat dictionary: {'jobId': '5126905698', 'state': 'finished', 'timestamp': '2021-07-21T13:07:37 [2021-07-21 13:08:17] 2021-07-21 17:07:37,474 | DEBUG | pilot.control.job | write_heartbeat_to_file | wrote heartbeat to file /var/lib/boinc-client/slots/37/heartbeat.json [2021-07-21 13:08:17] 2021-07-21 17:07:37,474 | DEBUG | pilot.control.job | queue_monitor | job 5126905698 was dequeued from the monitored payloads queue [2021-07-21 13:08:17] 2021-07-21 17:07:37,640 | DEBUG | pilot.control.job | queue_monitor | tmp job object deleted [2021-07-21 13:08:17] 2021-07-21 17:07:37,641 | INFO | pilot.control.job | make_job_report | [2021-07-21 13:08:17] 2021-07-21 17:07:37,641 | INFO | pilot.control.job | make_job_report | job summary report [2021-07-21 13:08:17] 2021-07-21 17:07:37,641 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2021-07-21 13:08:17] 2021-07-21 17:07:37,641 | INFO | pilot.control.job | make_job_report | PanDA job id: 5126905698 [2021-07-21 13:08:17] 2021-07-21 17:07:37,641 | INFO | pilot.control.job | make_job_report | task id: NULL [2021-07-21 13:08:17] 2021-07-21 17:07:37,642 | INFO | pilot.control.job | make_job_report | errors: (none) [2021-07-21 13:08:17] 2021-07-21 17:07:37,642 | INFO | pilot.control.job | make_job_report | status: LOG_TRANSFER = DONE [2021-07-21 13:08:17] 2021-07-21 17:07:37,642 | INFO | pilot.control.job | make_job_report | pilot state: finished [2021-07-21 13:08:17] 2021-07-21 17:07:37,642 | INFO | pilot.control.job | make_job_report | transexitcode: 0 [2021-07-21 13:08:17] 2021-07-21 17:07:37,642 | INFO | pilot.control.job | make_job_report | exeerrorcode: 0 [2021-07-21 13:08:17] 2021-07-21 17:07:37,642 | INFO | pilot.control.job | make_job_report | exeerrordiag: [2021-07-21 13:08:17] 2021-07-21 17:07:37,643 | INFO | pilot.control.job | make_job_report | exitcode: 0 [2021-07-21 13:08:17] 2021-07-21 17:07:37,643 | INFO | pilot.control.job | make_job_report | exitmsg: OK [2021-07-21 13:08:17] 2021-07-21 17:07:37,643 | INFO | pilot.control.job | make_job_report | cpuconsumptiontime: 2271 s [2021-07-21 13:08:17] 2021-07-21 17:07:37,643 | INFO | pilot.control.job | make_job_report | nevents: 2 [2021-07-21 13:08:17] 2021-07-21 17:07:37,643 | INFO | pilot.control.job | make_job_report | neventsw: 0 [2021-07-21 13:08:17] 2021-07-21 17:07:37,643 | INFO | pilot.control.job | make_job_report | pid: 92606 [2021-07-21 13:08:17] 2021-07-21 17:07:37,643 | INFO | pilot.control.job | make_job_report | pgrp: 92606 [2021-07-21 13:08:17] 2021-07-21 17:07:37,644 | INFO | pilot.control.job | make_job_report | corecount: 1 [2021-07-21 13:08:17] 2021-07-21 17:07:37,644 | INFO | pilot.control.job | make_job_report | event service: False [2021-07-21 13:08:17] 2021-07-21 17:07:37,644 | INFO | pilot.control.job | make_job_report | sizes: {24616960: 3855533, 24616961: 3855698, 24616962: 3855698, 24616972: 3855754, 24620346: 387831 [2021-07-21 13:08:17] 2021-07-21 17:07:37,644 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2021-07-21 13:08:17] 2021-07-21 17:07:37,644 | INFO | pilot.control.job | make_job_report | [2021-07-21 13:08:17] 2021-07-21 17:07:37,644 | DEBUG | pilot.control.job | has_job_completed | ls -lF /var/lib/boinc-client/slots/37: [2021-07-21 13:08:17] [2021-07-21 13:08:17] 2021-07-21 17:07:37,645 | INFO | pilot.util.container | execute | executing command: ls -lF /var/lib/boinc-client/slots/37 [2021-07-21 13:08:17] 2021-07-21 17:07:37,677 | DEBUG | pilot.control.job | has_job_completed | total 48752 [2021-07-21 13:08:17] -rw------- 1 boinc boinc 130 Jul 21 12:09 4k4NDmxuTQzn7Olcko1bjSoqABFKDmABFKDmumdXDmKEGKDmlfZXYo.diag [2021-07-21 13:08:17] -rw------- 1 boinc boinc 276628 Jul 21 13:07 7ef6d606-6ad7-4055-a785-b045054f7840_72980.1.job.log [2021-07-21 13:08:17] -rw------- 1 boinc boinc 171668 Jul 21 13:07 7ef6d606-6ad7-4055-a785-b045054f7840_72980.1.job.log.tgz [2021-07-21 13:08:17] -rw------- 1 boinc boinc 1067783 Jul 21 12:11 agis_schedconf.cvmfs.json [2021-07-21 13:08:17] -rw-r--r-- 1 boinc boinc 0 Jul 21 12:09 boinc_lockfile [2021-07-21 13:08:17] -rw-r--r-- 1 boinc boinc 8192 Jul 21 13:07 boinc_mmap_file [2021-07-21 13:08:17] -rw-r--r-- 1 boinc boinc 535 Jul 21 13:06 boinc_task_state.xml [2021-07-21 13:08:17] -rw------- 1 boinc boinc 1961522 Jul 21 12:11 cric_ddmendpoints.json [2021-07-21 13:08:17] -rw-r--r-- 1 boinc boinc 38184411 Jul 21 12:09 EVNT.04972714._000028.pool.root.1 [2021-07-21 13:08:17] -rw------- 1 boinc boinc 7099 Jul 21 13:07 heartbeat.json [2021-07-21 13:08:17] -rw-r--r-- 1 boinc boinc 6188 Jul 21 12:09 init_data.xml [2021-07-21 13:08:17] -rw-r--r-- 1 boinc boinc 344214 Jul 21 12:09 input.tar.gz [2021-07-21 13:08:17] -rw-r--r-- 1 boinc boinc 112 Jul 21 12:09 job.xml [2021-07-21 13:08:17] -rw------- 1 boinc boinc 1031 Jul 21 13:07 memory_monitor_summary.json [2021-07-21 13:08:17] -rw------- 1 boinc boinc 7148911 Jul 21 13:06 output.1.7ef6d606-6ad7-4055-a785-b045054f7840_72980.pool.root [2021-07-21 13:08:17] -rw------- 1 boinc boinc 536 Jul 21 13:07 output.list [2021-07-21 13:08:17] -rw-r--r-- 1 boinc boinc 2654 Jul 21 12:09 pandaJob.out [2021-07-21 13:08:17] drwxrwx--- 2 boinc boinc 4096 Jul 21 13:07 PanDA_Pilot-5126905698/ [2021-07-21 13:08:17] drwx------ 4 boinc boinc 4096 Jul 21 12:11 pilot2/ [2021-07-21 13:08:17] -rw-r--r-- 1 boinc boinc 340725 Jul 21 11:25 pilot2.tar.gz [2021-07-21 13:08:17] -rw------- 1 boinc boinc 257658 Jul 21 13:07 pilotlog.txt [2021-07-21 13:08:17] -rw-r--r-- 1 boinc boinc 3214 Jul 21 12:06 queuedata.json [2021-07-21 13:08:17] -rwxr-xr-x 1 boinc boinc 6966 Jul 21 12:09 run_atlas* [2021-07-21 13:08:17] -rwx------ 1 boinc boinc 20591 Jul 21 12:06 runpilot2-wrapper.sh* [2021-07-21 13:08:17] -rw-r--r-- 1 boinc boinc 407 Jul 21 12:09 runtime_log [2021-07-21 13:08:17] -rw-r--r-- 1 boinc boinc 5574 Jul 21 12:09 runtime_log.err [2021-07-21 13:08:17] drwxrwx--x 2 boinc boinc 4096 Jul 21 12:09 shared/ [2021-07-21 13:08:17] -rw-r--r-- 1 boinc boinc 16551 Jul 21 12:09 start_atlas.sh [2021-07-21 13:08:17] -rw-r--r-- 1 boinc boinc 2195 Jul 21 12:09 stderr.txt [2021-07-21 13:08:17] -rw-r--r-- 1 boinc boinc 107 Jul 21 12:09 wrapper_26015_x86_64-pc-linux-gnu [2021-07-21 13:08:17] -rw-r--r-- 1 boinc boinc 26 Jul 21 13:07 wrapper_checkpoint.txt [2021-07-21 13:08:17] 2021-07-21 17:07:37,677 | INFO | pilot.util.queuehandling | queue_report | queue jobs has 0 job(s) [2021-07-21 13:08:17] 2021-07-21 17:07:37,678 | INFO | pilot.util.queuehandling | queue_report | queue payloads has 0 job(s) [2021-07-21 13:08:17] 2021-07-21 17:07:37,678 | INFO | pilot.util.queuehandling | queue_report | queue data_in has 0 job(s) [2021-07-21 13:08:17] 2021-07-21 17:07:37,678 | INFO | pilot.util.queuehandling | queue_report | queue data_out has 0 job(s) [2021-07-21 13:08:17] 2021-07-21 17:07:37,678 | INFO | pilot.util.queuehandling | queue_report | queue current_data_in has 0 job(s) [2021-07-21 13:08:17] 2021-07-21 17:07:37,678 | INFO | pilot.util.queuehandling | queue_report | queue validated_jobs has 0 job(s) [2021-07-21 13:08:17] 2021-07-21 17:07:37,678 | INFO | pilot.util.queuehandling | queue_report | queue validated_payloads has 0 job(s) [2021-07-21 13:08:17] 2021-07-21 17:07:37,679 | INFO | pilot.util.queuehandling | queue_report | queue monitored_payloads has 0 job(s) [2021-07-21 13:08:17] 2021-07-21 17:07:37,679 | INFO | pilot.util.queuehandling | queue_report | queue finished_jobs has 0 job(s) [2021-07-21 13:08:17] 2021-07-21 17:07:37,679 | INFO | pilot.util.queuehandling | queue_report | queue finished_payloads has 0 job(s) [2021-07-21 13:08:17] 2021-07-21 17:07:37,679 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_in has 1 job(s) [2021-07-21 13:08:17] 2021-07-21 17:07:37,679 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_out has 0 job(s) [2021-07-21 13:08:17] 2021-07-21 17:07:37,679 | INFO | pilot.util.queuehandling | queue_report | queue failed_jobs has 0 job(s) [2021-07-21 13:08:17] 2021-07-21 17:07:37,679 | INFO | pilot.util.queuehandling | queue_report | queue failed_payloads has 0 job(s) [2021-07-21 13:08:17] 2021-07-21 17:07:37,680 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_in has 0 job(s) [2021-07-21 13:08:17] 2021-07-21 17:07:37,680 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_out has 0 job(s) [2021-07-21 13:08:17] 2021-07-21 17:07:37,680 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobs has 0 job(s) [2021-07-21 13:08:17] 2021-07-21 17:07:37,680 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s) [2021-07-21 13:08:17] 2021-07-21 17:07:37,680 | INFO | pilot.control.job | has_job_completed | job 5126905698 has completed (purged errors) [2021-07-21 13:08:17] 2021-07-21 17:07:37,681 | INFO | pilot.util.processes | cleanup | overall cleanup function is called [2021-07-21 13:08:17] 2021-07-21 17:07:37,683 | DEBUG | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc-client/slots/37/PanDA_Pilot-5126905698 [2021-07-21 13:08:17] 2021-07-21 17:07:38,688 | INFO | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [92606] [2021-07-21 13:08:17] 2021-07-21 17:07:38,688 | INFO | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 92606 [2021-07-21 13:08:17] 2021-07-21 17:07:38,689 | INFO | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes [2021-07-21 13:08:17] 2021-07-21 17:07:39,692 | INFO | pilot.util.processes | cleanup | collected zombie processes [2021-07-21 13:08:17] 2021-07-21 17:07:39,692 | INFO | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=92606 [2021-07-21 13:08:17] 2021-07-21 17:07:39,826 | INFO | pilot.util.processes | kill_processes | process IDs to be killed: [92606] (in reverse order) [2021-07-21 13:08:17] 2021-07-21 17:07:39,919 | WARNING | pilot.util.processes | kill_processes | found no corresponding commands to process id(s) [2021-07-21 13:08:17] 2021-07-21 17:07:39,919 | INFO | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs [2021-07-21 13:08:17] 2021-07-21 17:07:39,920 | DEBUG | pilot.util.queuehandling | purge_queue | queue purged [2021-07-21 13:08:17] 2021-07-21 17:07:39,920 | INFO | pilot.control.job | retrieve | ready for new job [2021-07-21 13:08:17] 2021-07-21 17:07:39,920 | INFO | root | retrieve | pilot has finished for previous job - re-establishing logging [2021-07-21 13:08:17] 2021-07-21 17:07:39,921 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2021-07-21 13:08:17] 2021-07-21 17:07:39,922 | INFO | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 2.12.2 (1) *** [2021-07-21 13:08:17] 2021-07-21 17:07:39,922 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2021-07-21 13:08:17] 2021-07-21 17:07:39,922 | INFO | pilot.util.auxiliary | pilot_version_banner | [2021-07-21 13:08:17] 2021-07-21 17:07:39,942 | INFO | pilot.util.auxiliary | display_architecture_info | architecture information: [2021-07-21 13:08:17] 2021-07-21 17:07:40,380 | INFO | pilot.util.auxiliary | display_architecture_info | [2021-07-21 13:08:17] LSB Version: :core-4.1-amd64:core-4.1-noarch [2021-07-21 13:08:17] Distributor ID: CentOS [2021-07-21 13:08:17] Description: CentOS Linux release 7.8.2003 (Core) [2021-07-21 13:08:17] Release: 7.8.2003 [2021-07-21 13:08:17] Codename: Core [2021-07-21 13:08:17] 2021-07-21 17:07:40,380 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2021-07-21 13:08:17] 2021-07-21 17:07:40,882 | DEBUG | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc-client/slots/37 [2021-07-21 13:08:17] 2021-07-21 17:07:40,922 | INFO | pilot.util.monitoring | check_local_space | sufficient remaining disk space (29757538304 B) [2021-07-21 13:08:17] 2021-07-21 17:07:40,922 | WARNING | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job [2021-07-21 13:08:17] 2021-07-21 17:07:40,923 | DEBUG | pilot.control.job | retrieve | will not set job_aborted yet [2021-07-21 13:08:17] 2021-07-21 17:07:40,923 | WARNING | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration [2021-07-21 13:08:17] 2021-07-21 17:07:40,923 | WARNING | pilot.control.monitor | control | aborting monitor loop since graceful_stop has been set [2021-07-21 13:08:17] 2021-07-21 17:07:40,923 | DEBUG | pilot.control.job | retrieve | [job] retrieve thread has finished [2021-07-21 13:08:17] 2021-07-21 17:07:40,924 | INFO | pilot.control.monitor | control | [monitor] control thread has ended [2021-07-21 13:08:17] 2021-07-21 17:07:41,105 | DEBUG | pilot.control.payload | validate_post | will not set job_aborted yet [2021-07-21 13:08:17] 2021-07-21 17:07:41,105 | INFO | pilot.control.payload | validate_post | [payload] validate_post thread has finished [2021-07-21 13:08:17] 2021-07-21 17:07:41,477 | DEBUG | pilot.control.job | control | job control ending since graceful_stop has been set [2021-07-21 13:08:17] 2021-07-21 17:07:41,477 | DEBUG | pilot.control.job | control | will not set job_aborted yet [2021-07-21 13:08:17] 2021-07-21 17:07:41,477 | DEBUG | pilot.control.job | control | [job] control thread has finished [2021-07-21 13:08:17] 2021-07-21 17:07:41,519 | DEBUG | pilot.control.payload | validate_pre | will not set job_aborted yet [2021-07-21 13:08:17] 2021-07-21 17:07:41,519 | INFO | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished [2021-07-21 13:08:17] 2021-07-21 17:07:41,652 | DEBUG | pilot.control.data | control | data control ending since graceful_stop has been set [2021-07-21 13:08:17] 2021-07-21 17:07:41,653 | DEBUG | pilot.control.data | control | will not set job_aborted yet [2021-07-21 13:08:17] 2021-07-21 17:07:41,653 | DEBUG | pilot.control.data | control | [data] control thread has finished [2021-07-21 13:08:17] 2021-07-21 17:07:41,675 | DEBUG | pilot.control.data | copytool_in | will not set job_aborted yet [2021-07-21 13:08:17] 2021-07-21 17:07:41,675 | DEBUG | pilot.control.data | copytool_in | [data] copytool_in thread has finished [2021-07-21 13:08:17] 2021-07-21 17:07:41,752 | DEBUG | pilot.control.payload | control | payload control ending since graceful_stop has been set [2021-07-21 13:08:17] 2021-07-21 17:07:41,753 | DEBUG | pilot.control.payload | control | will not set job_aborted yet [2021-07-21 13:08:17] 2021-07-21 17:07:41,753 | DEBUG | pilot.control.payload | control | [payload] control thread has finished [2021-07-21 13:08:17] 2021-07-21 17:07:41,774 | DEBUG | pilot.control.payload | execute_payloads | will not set job_aborted yet [2021-07-21 13:08:17] 2021-07-21 17:07:41,775 | INFO | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished [2021-07-21 13:08:17] 2021-07-21 17:07:41,928 | DEBUG | pilot.control.payload | failed_post | will not set job_aborted yet [2021-07-21 13:08:17] 2021-07-21 17:07:41,928 | INFO | pilot.control.payload | failed_post | [payload] failed_post thread has finished [2021-07-21 13:08:17] 2021-07-21 17:07:42,173 | DEBUG | pilot.control.job | validate | will not set job_aborted yet [2021-07-21 13:08:17] 2021-07-21 17:07:42,173 | DEBUG | pilot.control.job | validate | [job] validate thread has finished [2021-07-21 13:08:17] 2021-07-21 17:07:42,223 | DEBUG | pilot.control.job | create_data_payload | will not set job_aborted yet [2021-07-21 13:08:17] 2021-07-21 17:07:42,224 | DEBUG | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished [2021-07-21 13:08:17] 2021-07-21 17:07:42,327 | WARNING | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration [2021-07-21 13:08:17] 2021-07-21 17:07:42,648 | WARNING | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration [2021-07-21 13:08:17] 2021-07-21 17:07:42,649 | DEBUG | pilot.control.job | queue_monitor | will not set job_aborted yet [2021-07-21 13:08:17] 2021-07-21 17:07:42,649 | DEBUG | pilot.control.job | queue_monitor | [job] queue monitor thread has finished [2021-07-21 13:08:17] 2021-07-21 17:07:43,328 | DEBUG | pilot.control.data | copytool_out | will not set job_aborted yet [2021-07-21 13:08:17] 2021-07-21 17:07:43,328 | DEBUG | pilot.control.data | copytool_out | [data] copytool_out thread has finished [2021-07-21 13:08:17] 2021-07-21 17:07:43,924 | DEBUG | pilot.control.data | queue_monitoring | will not set job_aborted yet [2021-07-21 13:08:17] 2021-07-21 17:07:43,924 | DEBUG | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished [2021-07-21 13:08:17] 2021-07-21 17:08:15,860 | WARNING | pilot.control.job | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 72 s) [2021-07-21 13:08:17] 2021-07-21 17:08:15,861 | DEBUG | pilot.util.processes | threads_aborted | aborting since the last relevant thread is about to finish [2021-07-21 13:08:17] 2021-07-21 17:08:15,861 | DEBUG | pilot.control.job | job_monitor | will proceed to set job_aborted [2021-07-21 13:08:17] 2021-07-21 17:08:15,861 | DEBUG | pilot.control.job | job_monitor | [job] job monitor thread has finished [2021-07-21 13:08:17] 2021-07-21 17:08:16,380 | INFO | pilot.workflow.generic | run | end of generic workflow (traces error code: 0) [2021-07-21 13:08:17] 2021-07-21 17:08:16,381 | INFO | root | wrap_up | traces error code: 0 [2021-07-21 13:08:17] 2021-07-21 17:08:16,381 | INFO | root | wrap_up | pilot has finished [2021-07-21 13:08:17] 2021-07-21 17:08:16,641 [wrapper] ==== pilot stdout END ==== [2021-07-21 13:08:17] 2021-07-21 17:08:16,666 [wrapper] ==== wrapper stdout RESUME ==== [2021-07-21 13:08:17] 2021-07-21 17:08:16,690 [wrapper] Pilot exit status: 0 [2021-07-21 13:08:17] 2021-07-21 17:08:16,878 [wrapper] pandaids: 5126905698 [2021-07-21 13:08:17] 2021-07-21 17:08:16,918 [wrapper] apfmon messages muted [2021-07-21 13:08:17] 2021-07-21 17:08:16,942 [wrapper] Test setup, not cleaning [2021-07-21 13:08:17] 2021-07-21 17:08:16,966 [wrapper] ==== wrapper stdout END ==== [2021-07-21 13:08:17] 2021-07-21 17:08:16,990 [wrapper] ==== wrapper stderr END ==== [2021-07-21 13:08:17] 2021-07-21 17:08:17,037 [wrapper] wrapperexiting ec=0, duration=3507 [2021-07-21 13:08:17] 2021-07-21 17:08:17,062 [wrapper] apfmon messages muted [2021-07-21 13:08:17] *** Error codes and diagnostics *** [2021-07-21 13:08:17] "exeErrorCode": 0, [2021-07-21 13:08:17] "exeErrorDiag": "", [2021-07-21 13:08:17] "pilotErrorCode": 0, [2021-07-21 13:08:17] "pilotErrorDiag": "", [2021-07-21 13:08:17] *** Listing of results directory *** [2021-07-21 13:08:17] total 56000 [2021-07-21 13:08:17] -rw-r--r-- 1 boinc boinc 340725 Jul 21 11:25 pilot2.tar.gz [2021-07-21 13:08:17] -rwx------ 1 boinc boinc 20591 Jul 21 12:06 runpilot2-wrapper.sh [2021-07-21 13:08:17] -rw-r--r-- 1 boinc boinc 3214 Jul 21 12:06 queuedata.json [2021-07-21 13:08:17] -rw-r--r-- 1 boinc boinc 107 Jul 21 12:09 wrapper_26015_x86_64-pc-linux-gnu [2021-07-21 13:08:17] -rwxr-xr-x 1 boinc boinc 6966 Jul 21 12:09 run_atlas [2021-07-21 13:08:17] -rw-r--r-- 1 boinc boinc 112 Jul 21 12:09 job.xml [2021-07-21 13:08:17] drwxrwx--x 2 boinc boinc 4096 Jul 21 12:09 shared [2021-07-21 13:08:17] -rw-r--r-- 1 boinc boinc 6188 Jul 21 12:09 init_data.xml [2021-07-21 13:08:17] -rw-r--r-- 1 boinc boinc 0 Jul 21 12:09 boinc_lockfile [2021-07-21 13:08:17] -rw-r--r-- 1 boinc boinc 16551 Jul 21 12:09 start_atlas.sh [2021-07-21 13:08:17] -rw-r--r-- 1 boinc boinc 344214 Jul 21 12:09 input.tar.gz [2021-07-21 13:08:17] -rw-r--r-- 1 boinc boinc 38184411 Jul 21 12:09 EVNT.04972714._000028.pool.root.1 [2021-07-21 13:08:17] -rw-r--r-- 1 boinc boinc 2654 Jul 21 12:09 pandaJob.out [2021-07-21 13:08:17] -rw------- 1 boinc boinc 1067783 Jul 21 12:11 agis_schedconf.cvmfs.json [2021-07-21 13:08:17] -rw------- 1 boinc boinc 1961522 Jul 21 12:11 cric_ddmendpoints.json [2021-07-21 13:08:17] drwx------ 4 boinc boinc 4096 Jul 21 12:11 pilot2 [2021-07-21 13:08:17] -rw------- 1 boinc boinc 7148911 Jul 21 13:06 output.1.7ef6d606-6ad7-4055-a785-b045054f7840_72980.pool.root [2021-07-21 13:08:17] -rw-r--r-- 1 boinc boinc 535 Jul 21 13:06 boinc_task_state.xml [2021-07-21 13:08:17] -rw------- 1 boinc boinc 1031 Jul 21 13:07 memory_monitor_summary.json [2021-07-21 13:08:17] -rw------- 1 boinc boinc 171668 Jul 21 13:07 7ef6d606-6ad7-4055-a785-b045054f7840_72980.1.job.log.tgz [2021-07-21 13:08:17] -rw------- 1 boinc boinc 7099 Jul 21 13:07 heartbeat.json [2021-07-21 13:08:17] -rw-r--r-- 1 boinc boinc 26 Jul 21 13:08 wrapper_checkpoint.txt [2021-07-21 13:08:17] -rw-r--r-- 1 boinc boinc 8192 Jul 21 13:08 boinc_mmap_file [2021-07-21 13:08:17] -rw------- 1 boinc boinc 7518 Jul 21 13:08 pilotlog.txt [2021-07-21 13:08:17] -rw------- 1 boinc boinc 291454 Jul 21 13:08 7ef6d606-6ad7-4055-a785-b045054f7840_72980.1.job.log [2021-07-21 13:08:17] -rw------- 1 boinc boinc 536 Jul 21 13:08 output.list [2021-07-21 13:08:17] -rw-r--r-- 1 boinc boinc 9429 Jul 21 13:08 runtime_log.err [2021-07-21 13:08:17] -rw-r--r-- 1 boinc boinc 748 Jul 21 13:08 runtime_log [2021-07-21 13:08:17] -rw------- 1 boinc boinc 7628800 Jul 21 13:08 result.tar.gz [2021-07-21 13:08:17] -rw------- 1 boinc boinc 562 Jul 21 13:08 4k4NDmxuTQzn7Olcko1bjSoqABFKDmABFKDmumdXDmKEGKDmlfZXYo.diag [2021-07-21 13:08:17] -rw-r--r-- 1 boinc boinc 29842 Jul 21 13:08 stderr.txt [2021-07-21 13:08:17] HITS file was successfully produced: [2021-07-21 13:08:17] -rw------- 1 boinc boinc 7148911 Jul 21 13:06 shared/HITS.pool.root.1 [2021-07-21 13:08:17] *** Contents of shared directory: *** [2021-07-21 13:08:17] total 52088 [2021-07-21 13:08:17] -rw-r--r-- 1 boinc boinc 38184411 Jul 21 12:09 ATLAS.root_0 [2021-07-21 13:08:17] -rw-r--r-- 1 boinc boinc 16551 Jul 21 12:09 start_atlas.sh [2021-07-21 13:08:17] -rw-r--r-- 1 boinc boinc 344214 Jul 21 12:09 input.tar.gz [2021-07-21 13:08:17] -rw------- 1 boinc boinc 7148911 Jul 21 13:06 HITS.pool.root.1 [2021-07-21 13:08:17] -rw------- 1 boinc boinc 7628800 Jul 21 13:08 result.tar.gz 13:08:19 (70734): run_atlas exited; CPU time 2238.003571 13:08:19 (70734): called boinc_finish(0) </stderr_txt> ]]>
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