Name c15NDmxElQzn7Olcko1bjSoqABFKDmABFKDmumdXDmlFGKDm7iH3Fn_0
Workunit 2108538
Created 22 Jul 2021, 10:36:15 UTC
Sent 22 Jul 2021, 10:51:51 UTC
Report deadline 29 Jul 2021, 10:51:51 UTC
Received 22 Jul 2021, 12:00:26 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4357
Run time 1 hours 7 min 42 sec
CPU time 35 min 6 sec
Validate state Valid
Credit 14.62
Device peak FLOPS 3.04 GFLOPS
Application version ATLAS Simulation v1.04 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 1.45 GB
Peak swap size 34.69 GB
Peak disk usage 84.12 MB

Stderr output

<core_client_version>7.9.3</core_client_version>
<![CDATA[
<stderr_txt>
06:52:15 (14524): wrapper (7.7.26015): starting
06:52:15 (14524): wrapper: running run_atlas (--nthreads 1)
[2021-07-22 06:52:15] Arguments: --nthreads 1
[2021-07-22 06:52:15] Threads: 1
[2021-07-22 06:52:15] Checking for CVMFS
[2021-07-22 06:52:19] Probing /cvmfs/atlas.cern.ch... OK
[2021-07-22 06:52:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2021-07-22 06:52:22] Running cvmfs_config stat atlas.cern.ch
[2021-07-22 06:52:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2021-07-22 06:52:24] 2.9.0.0 15081 0 24780 88815 3 1 3028049 4194304 0 130560 0 0 0.000 528 627 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 0
[2021-07-22 06:52:24] CVMFS is ok
[2021-07-22 06:52:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2021-07-22 06:52:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2021-07-22 06:52:24] Small home clusters do not require a local http proxy but it is suggested if
[2021-07-22 06:52:24] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2021-07-22 06:52:24] Further information can be found at the LHC@home message board.
[2021-07-22 06:52:24] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2021-07-22 06:52:24] Checking for singularity binary...
[2021-07-22 06:52:24] Using singularity found in PATH at /usr/local/bin/singularity
[2021-07-22 06:52:24] Running /usr/local/bin/singularity --version
[2021-07-22 06:52:24] singularity version 3.7.2+10-ga969f0f8c
[2021-07-22 06:52:24] Checking singularity works with /usr/local/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2021-07-22 06:52:27] E5-2670
[2021-07-22 06:52:27] Singularity works
[2021-07-22 06:52:27] Starting ATLAS job with PandaID=5127731325
[2021-07-22 06:52:27] Running command: /usr/local/bin/singularity exec --pwd /var/lib/boinc-client/slots/32 -B /cvmfs,/var /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2021-07-22 08:00:04]  *** The last 200 lines of the pilot log: ***
[2021-07-22 08:00:05] }
[2021-07-22 08:00:05] 2021-07-22 11:59:51,584 | DEBUG    | pilot.user.atlas.utilities       | get_metadata_dict_from_txt | writing prmon dictionary to: /var/lib/boinc-client/slots/32/PanDA_Pilot-5127731325/memory_monitor_o
[2021-07-22 08:00:05] 2021-07-22 11:59:51,585 | INFO     | pilot.util.container             | execute                   | executing command: curl --connect-timeout 20 --max-time 120 -H "Content-Type: application/json" -X P
[2021-07-22 08:00:05] 2021-07-22 11:59:53,131 | DEBUG    | pilot.user.atlas.common          | update_server             | sent prmon JSON dictionary to logstash server
[2021-07-22 08:00:05] 2021-07-22 11:59:53,131 | DEBUG    | pilot.user.atlas.common          | update_server             | stdout: ok
[2021-07-22 08:00:05] 2021-07-22 11:59:53,131 | DEBUG    | pilot.user.atlas.common          | update_server             | stderr:   % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
[2021-07-22 08:00:05]                                  Dload  Upload   Total   Spent    Left  Speed
[2021-07-22 08:00:05] 
[2021-07-22 08:00:05]   0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
[2021-07-22 08:00:05]   0     0    0     0    0     0      0      0 --:--:--  0:00:01 --:--:--     0
[2021-07-22 08:00:05] 100 17914  100     2  100 17912      1  12474  0:00:02  0:00:01  0:00:01 12482
[2021-07-22 08:00:05] 
[2021-07-22 08:00:05] 2021-07-22 11:59:53,132 | INFO     | pilot.control.job                | send_state                | pilot will not update the server (heartbeat message will be written to file)
[2021-07-22 08:00:05] 2021-07-22 11:59:53,132 | INFO     | pilot.control.job                | send_state                | job 5127731325 has finished - writing final server update
[2021-07-22 08:00:05] 2021-07-22 11:59:53,132 | DEBUG    | pilot.user.atlas.jobmetrics      | get_job_metrics_string    | job definition core count: 1
[2021-07-22 08:00:05] 2021-07-22 11:59:53,133 | INFO     | pilot.user.atlas.jobmetrics      | get_job_metrics_string    | will not add max space = -38556793 B to job metrics
[2021-07-22 08:00:05] 2021-07-22 11:59:53,134 | DEBUG    | pilot.api.analytics              | get_fitted_data           | removing tails from data to be fitted
[2021-07-22 08:00:05] 2021-07-22 11:59:53,134 | INFO     | pilot.api.analytics              | get_fitted_data           | fitting pss+swap vs Time
[2021-07-22 08:00:05] 2021-07-22 11:59:53,135 | INFO     | pilot.api.analytics              | get_fitted_data           | current memory leak: 332.37 B/s (using 55 data points, chi2=706106)
[2021-07-22 08:00:05] 2021-07-22 11:59:53,135 | DEBUG    | pilot.user.atlas.jobmetrics      | get_job_metrics           | job metrics="actualCoreCount=4 nEvents=2 dbTime=275.43 dbData=4274626 leak=332.37 chi2=706106 eventn
[2021-07-22 08:00:05] 2021-07-22 11:59:53,135 | INFO     | pilot.control.job                | get_data_structure        | mean actualcorecount: 4.320000
[2021-07-22 08:00:05] 2021-07-22 11:59:53,135 | INFO     | pilot.control.job                | get_data_structure        | total number of processed events: 2 (read)
[2021-07-22 08:00:05] 2021-07-22 11:59:53,157 | INFO     | pilot.util.container             | execute                   | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2021-07-22 08:00:05] 2021-07-22 11:59:53,256 | INFO     | pilot.user.atlas.utilities       | get_memory_values         | using path: /var/lib/boinc-client/slots/32/PanDA_Pilot-5127731325/memory_monitor_summary.json (trf n
[2021-07-22 08:00:05] 2021-07-22 11:59:53,258 | DEBUG    | pilot.user.atlas.utilities       | get_memory_monitor_info   | summary_dictionary={'Avg': {'nprocs': 5.225, 'nthreads': 6.177, 'pss': 1211782.0, 'rchar': 181167.0,
[2021-07-22 08:00:05] 2021-07-22 11:59:53,258 | INFO     | pilot.user.atlas.utilities       | get_memory_monitor_info   | extracted standard info from prmon json
[2021-07-22 08:00:05] 2021-07-22 11:59:53,258 | INFO     | pilot.user.atlas.utilities       | get_memory_monitor_info   | extracted standard memory fields from prmon json
[2021-07-22 08:00:05] 2021-07-22 11:59:53,258 | INFO     | pilot.util.timing                | timing_report             | ..............................
[2021-07-22 08:00:05] 2021-07-22 11:59:53,259 | INFO     | pilot.util.timing                | timing_report             | . Timing measurements:
[2021-07-22 08:00:05] 2021-07-22 11:59:53,259 | INFO     | pilot.util.timing                | timing_report             | . get job = 0 s
[2021-07-22 08:00:05] 2021-07-22 11:59:53,259 | INFO     | pilot.util.timing                | timing_report             | . initial setup = 2 s
[2021-07-22 08:00:05] 2021-07-22 11:59:53,259 | INFO     | pilot.util.timing                | timing_report             | . payload setup = 91 s
[2021-07-22 08:00:05] 2021-07-22 11:59:53,259 | INFO     | pilot.util.timing                | timing_report             | . total setup = 93 s
[2021-07-22 08:00:05] 2021-07-22 11:59:53,259 | INFO     | pilot.util.timing                | timing_report             | . stage-in = 0 s
[2021-07-22 08:00:05] 2021-07-22 11:59:53,259 | INFO     | pilot.util.timing                | timing_report             | . payload execution = 3804 s
[2021-07-22 08:00:05] 2021-07-22 11:59:53,259 | INFO     | pilot.util.timing                | timing_report             | . stage-out = 1 s
[2021-07-22 08:00:05] 2021-07-22 11:59:53,259 | INFO     | pilot.util.timing                | timing_report             | ..............................
[2021-07-22 08:00:05] 2021-07-22 11:59:53,259 | DEBUG    | pilot.control.job                | send_state                | is_harvester_mode(args) : False
[2021-07-22 08:00:05] 2021-07-22 11:59:53,260 | DEBUG    | pilot.control.job                | write_heartbeat_to_file   | heartbeat dictionary: {'jobId': '5127731325', 'state': 'finished', 'timestamp': '2021-07-22T07:59:53
[2021-07-22 08:00:05] 2021-07-22 11:59:53,261 | DEBUG    | pilot.control.job                | write_heartbeat_to_file   | wrote heartbeat to file /var/lib/boinc-client/slots/32/heartbeat.json
[2021-07-22 08:00:05] 2021-07-22 11:59:53,261 | DEBUG    | pilot.control.job                | queue_monitor             | job 5127731325 was dequeued from the monitored payloads queue
[2021-07-22 08:00:05] 2021-07-22 11:59:53,394 | DEBUG    | pilot.control.job                | queue_monitor             | tmp job object deleted
[2021-07-22 08:00:05] 2021-07-22 11:59:53,394 | INFO     | pilot.control.job                | make_job_report           | 
[2021-07-22 08:00:05] 2021-07-22 11:59:53,394 | INFO     | pilot.control.job                | make_job_report           | job summary report
[2021-07-22 08:00:05] 2021-07-22 11:59:53,394 | INFO     | pilot.control.job                | make_job_report           | --------------------------------------------------
[2021-07-22 08:00:05] 2021-07-22 11:59:53,395 | INFO     | pilot.control.job                | make_job_report           | PanDA job id: 5127731325
[2021-07-22 08:00:05] 2021-07-22 11:59:53,395 | INFO     | pilot.control.job                | make_job_report           | task id: NULL
[2021-07-22 08:00:05] 2021-07-22 11:59:53,395 | INFO     | pilot.control.job                | make_job_report           | errors: (none)
[2021-07-22 08:00:05] 2021-07-22 11:59:53,395 | INFO     | pilot.control.job                | make_job_report           | status: LOG_TRANSFER = DONE 
[2021-07-22 08:00:05] 2021-07-22 11:59:53,395 | INFO     | pilot.control.job                | make_job_report           | pilot state: finished 
[2021-07-22 08:00:05] 2021-07-22 11:59:53,395 | INFO     | pilot.control.job                | make_job_report           | transexitcode: 0
[2021-07-22 08:00:05] 2021-07-22 11:59:53,395 | INFO     | pilot.control.job                | make_job_report           | exeerrorcode: 0
[2021-07-22 08:00:05] 2021-07-22 11:59:53,395 | INFO     | pilot.control.job                | make_job_report           | exeerrordiag: 
[2021-07-22 08:00:05] 2021-07-22 11:59:53,395 | INFO     | pilot.control.job                | make_job_report           | exitcode: 0
[2021-07-22 08:00:05] 2021-07-22 11:59:53,395 | INFO     | pilot.control.job                | make_job_report           | exitmsg: OK
[2021-07-22 08:00:05] 2021-07-22 11:59:53,396 | INFO     | pilot.control.job                | make_job_report           | cpuconsumptiontime: 2223 s
[2021-07-22 08:00:05] 2021-07-22 11:59:53,396 | INFO     | pilot.control.job                | make_job_report           | nevents: 2
[2021-07-22 08:00:05] 2021-07-22 11:59:53,396 | INFO     | pilot.control.job                | make_job_report           | neventsw: 0
[2021-07-22 08:00:05] 2021-07-22 11:59:53,396 | INFO     | pilot.control.job                | make_job_report           | pid: 41933
[2021-07-22 08:00:05] 2021-07-22 11:59:53,396 | INFO     | pilot.control.job                | make_job_report           | pgrp: 41933
[2021-07-22 08:00:05] 2021-07-22 11:59:53,396 | INFO     | pilot.control.job                | make_job_report           | corecount: 1
[2021-07-22 08:00:05] 2021-07-22 11:59:53,396 | INFO     | pilot.control.job                | make_job_report           | event service: False
[2021-07-22 08:00:05] 2021-07-22 11:59:53,396 | INFO     | pilot.control.job                | make_job_report           | sizes: {24684369: 3855572, 24684370: 3855685, 24684371: 3855793, 24684381: 3855793, 24688280: 387933
[2021-07-22 08:00:05] 2021-07-22 11:59:53,396 | INFO     | pilot.control.job                | make_job_report           | --------------------------------------------------
[2021-07-22 08:00:05] 2021-07-22 11:59:53,396 | INFO     | pilot.control.job                | make_job_report           | 
[2021-07-22 08:00:05] 2021-07-22 11:59:53,397 | DEBUG    | pilot.control.job                | has_job_completed         | ls -lF /var/lib/boinc-client/slots/32:
[2021-07-22 08:00:05] 
[2021-07-22 08:00:05] 2021-07-22 11:59:53,397 | INFO     | pilot.util.container             | execute                   | executing command: ls -lF /var/lib/boinc-client/slots/32
[2021-07-22 08:00:05] 2021-07-22 11:59:53,456 | DEBUG    | pilot.control.job                | has_job_completed         | total 44956
[2021-07-22 08:00:05] -rw------- 1 boinc boinc  1069008 Jul 22 06:54 agis_schedconf.cvmfs.json
[2021-07-22 08:00:05] -rw------- 1 boinc boinc   403743 Jul 22 07:59 b3d9322e-b2c7-4107-80a7-78d34810baa7_13150.1.job.log
[2021-07-22 08:00:05] -rw------- 1 boinc boinc   193078 Jul 22 07:59 b3d9322e-b2c7-4107-80a7-78d34810baa7_13150.1.job.log.tgz
[2021-07-22 08:00:05] -rw-r--r-- 1 boinc boinc        0 Jul 22 06:52 boinc_lockfile
[2021-07-22 08:00:05] -rw-r--r-- 1 boinc boinc     8192 Jul 22 07:59 boinc_mmap_file
[2021-07-22 08:00:05] -rw-r--r-- 1 boinc boinc      535 Jul 22 07:59 boinc_task_state.xml
[2021-07-22 08:00:05] -rw------- 1 boinc boinc      130 Jul 22 06:52 c15NDmxElQzn7Olcko1bjSoqABFKDmABFKDmumdXDmlFGKDm7iH3Fn.diag
[2021-07-22 08:00:05] -rw------- 1 boinc boinc  1961522 Jul 22 06:54 cric_ddmendpoints.json
[2021-07-22 08:00:05] -rw-r--r-- 1 boinc boinc 39611081 Jul 22 06:52 EVNT.04972714._000022.pool.root.1
[2021-07-22 08:00:05] -rw------- 1 boinc boinc     7336 Jul 22 07:59 heartbeat.json
[2021-07-22 08:00:05] -rw-r--r-- 1 boinc boinc     6188 Jul 22 06:52 init_data.xml
[2021-07-22 08:00:05] -rw-r--r-- 1 boinc boinc   352971 Jul 22 06:52 input.tar.gz
[2021-07-22 08:00:05] -rw-r--r-- 1 boinc boinc      112 Jul 22 06:52 job.xml
[2021-07-22 08:00:05] -rw------- 1 boinc boinc     1015 Jul 22 07:59 memory_monitor_summary.json
[2021-07-22 08:00:05] -rw------- 1 boinc boinc  1549091 Jul 22 07:59 output.1.b3d9322e-b2c7-4107-80a7-78d34810baa7_13150.pool.root
[2021-07-22 08:00:05] -rw------- 1 boinc boinc      536 Jul 22 07:59 output.list
[2021-07-22 08:00:05] -rw-r--r-- 1 boinc boinc     2595 Jul 22 06:52 pandaJob.out
[2021-07-22 08:00:05] drwxrwx--- 2 boinc boinc     4096 Jul 22 07:59 PanDA_Pilot-5127731325/
[2021-07-22 08:00:05] drwx------ 4 boinc boinc     4096 Jul 22 06:54 pilot2/
[2021-07-22 08:00:05] -rw-r--r-- 1 boinc boinc   343045 Jul 21 09:05 pilot2.tar.gz
[2021-07-22 08:00:05] -rw------- 1 boinc boinc   384656 Jul 22 07:59 pilotlog.txt
[2021-07-22 08:00:05] -rw-r--r-- 1 boinc boinc     3214 Jul 22 06:36 queuedata.json
[2021-07-22 08:00:05] -rwxr-xr-x 1 boinc boinc     6966 Jul 22 06:52 run_atlas*
[2021-07-22 08:00:05] -rwx------ 1 boinc boinc    20589 Jul 22 06:36 runpilot2-wrapper.sh*
[2021-07-22 08:00:05] -rw-r--r-- 1 boinc boinc      407 Jul 22 06:52 runtime_log
[2021-07-22 08:00:05] -rw-r--r-- 1 boinc boinc     5579 Jul 22 06:52 runtime_log.err
[2021-07-22 08:00:05] drwxrwx--x 2 boinc boinc     4096 Jul 22 06:52 shared/
[2021-07-22 08:00:05] -rw-r--r-- 1 boinc boinc    16569 Jul 22 06:52 start_atlas.sh
[2021-07-22 08:00:05] -rw-r--r-- 1 boinc boinc     2195 Jul 22 06:52 stderr.txt
[2021-07-22 08:00:05] -rw-r--r-- 1 boinc boinc      107 Jul 22 06:52 wrapper_26015_x86_64-pc-linux-gnu
[2021-07-22 08:00:05] -rw-r--r-- 1 boinc boinc       26 Jul 22 07:59 wrapper_checkpoint.txt
[2021-07-22 08:00:05] 2021-07-22 11:59:53,456 | INFO     | pilot.util.queuehandling         | queue_report              | queue jobs has 0 job(s)
[2021-07-22 08:00:05] 2021-07-22 11:59:53,457 | INFO     | pilot.util.queuehandling         | queue_report              | queue payloads has 0 job(s)
[2021-07-22 08:00:05] 2021-07-22 11:59:53,457 | INFO     | pilot.util.queuehandling         | queue_report              | queue data_in has 0 job(s)
[2021-07-22 08:00:05] 2021-07-22 11:59:53,457 | INFO     | pilot.util.queuehandling         | queue_report              | queue data_out has 0 job(s)
[2021-07-22 08:00:05] 2021-07-22 11:59:53,457 | INFO     | pilot.util.queuehandling         | queue_report              | queue current_data_in has 0 job(s)
[2021-07-22 08:00:05] 2021-07-22 11:59:53,457 | INFO     | pilot.util.queuehandling         | queue_report              | queue validated_jobs has 0 job(s)
[2021-07-22 08:00:05] 2021-07-22 11:59:53,457 | INFO     | pilot.util.queuehandling         | queue_report              | queue validated_payloads has 0 job(s)
[2021-07-22 08:00:05] 2021-07-22 11:59:53,457 | INFO     | pilot.util.queuehandling         | queue_report              | queue monitored_payloads has 0 job(s)
[2021-07-22 08:00:05] 2021-07-22 11:59:53,458 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_jobs has 0 job(s)
[2021-07-22 08:00:05] 2021-07-22 11:59:53,458 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_payloads has 0 job(s)
[2021-07-22 08:00:05] 2021-07-22 11:59:53,458 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_data_in has 1 job(s)
[2021-07-22 08:00:05] 2021-07-22 11:59:53,458 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_data_out has 0 job(s)
[2021-07-22 08:00:05] 2021-07-22 11:59:53,458 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_jobs has 0 job(s)
[2021-07-22 08:00:05] 2021-07-22 11:59:53,458 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_payloads has 0 job(s)
[2021-07-22 08:00:05] 2021-07-22 11:59:53,458 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_data_in has 0 job(s)
[2021-07-22 08:00:05] 2021-07-22 11:59:53,459 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_data_out has 0 job(s)
[2021-07-22 08:00:05] 2021-07-22 11:59:53,459 | INFO     | pilot.util.queuehandling         | queue_report              | queue completed_jobs has 0 job(s)
[2021-07-22 08:00:05] 2021-07-22 11:59:53,459 | INFO     | pilot.util.queuehandling         | queue_report              | queue completed_jobids has 1 job(s)
[2021-07-22 08:00:05] 2021-07-22 11:59:53,459 | INFO     | pilot.control.job                | has_job_completed         | job 5127731325 has completed (purged errors)
[2021-07-22 08:00:05] 2021-07-22 11:59:53,459 | INFO     | pilot.util.processes             | cleanup                   | overall cleanup function is called
[2021-07-22 08:00:05] 2021-07-22 11:59:53,462 | DEBUG    | pilot.util.processes             | cleanup                   | work directory was removed: /var/lib/boinc-client/slots/32/PanDA_Pilot-5127731325
[2021-07-22 08:00:05] 2021-07-22 11:59:54,464 | INFO     | pilot.info.jobdata               | collect_zombies           | --- collectZombieJob: --- 10, [41933]
[2021-07-22 08:00:05] 2021-07-22 11:59:54,465 | INFO     | pilot.info.jobdata               | collect_zombies           | zombie collector trying to kill pid 41933
[2021-07-22 08:00:05] 2021-07-22 11:59:54,465 | INFO     | pilot.info.jobdata               | collect_zombies           | harmless exception when collecting zombies: [Errno 10] No child processes
[2021-07-22 08:00:05] 2021-07-22 11:59:55,468 | INFO     | pilot.util.processes             | cleanup                   | collected zombie processes
[2021-07-22 08:00:05] 2021-07-22 11:59:55,469 | INFO     | pilot.util.processes             | cleanup                   | will now attempt to kill all subprocesses of pid=41933
[2021-07-22 08:00:05] 2021-07-22 11:59:55,735 | INFO     | pilot.util.processes             | kill_processes            | process IDs to be killed: [41933] (in reverse order)
[2021-07-22 08:00:05] 2021-07-22 11:59:55,885 | WARNING  | pilot.util.processes             | kill_processes            | found no corresponding commands to process id(s)
[2021-07-22 08:00:05] 2021-07-22 11:59:55,886 | INFO     | pilot.util.processes             | kill_orphans              | Do not look for orphan processes in BOINC jobs
[2021-07-22 08:00:05] 2021-07-22 11:59:55,887 | DEBUG    | pilot.util.queuehandling         | purge_queue               | queue purged
[2021-07-22 08:00:05] 2021-07-22 11:59:55,887 | INFO     | pilot.control.job                | retrieve                  | ready for new job
[2021-07-22 08:00:05] 2021-07-22 11:59:55,887 | INFO     | root                             | retrieve                  | pilot has finished for previous job - re-establishing logging
[2021-07-22 08:00:05] 2021-07-22 11:59:55,889 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | *****************************************
[2021-07-22 08:00:05] 2021-07-22 11:59:55,890 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ***  PanDA Pilot version 2.12.3 (13)  ***
[2021-07-22 08:00:05] 2021-07-22 11:59:55,890 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | *****************************************
[2021-07-22 08:00:05] 2021-07-22 11:59:55,890 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | 
[2021-07-22 08:00:05] 2021-07-22 11:59:55,918 | INFO     | pilot.util.auxiliary             | display_architecture_info | architecture information:
[2021-07-22 08:00:05] 2021-07-22 11:59:56,611 | INFO     | pilot.util.auxiliary             | display_architecture_info | 
[2021-07-22 08:00:05] LSB Version:	:core-4.1-amd64:core-4.1-noarch
[2021-07-22 08:00:05] Distributor ID:	CentOS
[2021-07-22 08:00:05] Description:	CentOS Linux release 7.8.2003 (Core)
[2021-07-22 08:00:05] Release:	7.8.2003
[2021-07-22 08:00:05] Codename:	Core
[2021-07-22 08:00:05] 2021-07-22 11:59:56,612 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | *****************************************
[2021-07-22 08:00:05] 2021-07-22 11:59:57,115 | DEBUG    | pilot.util.monitoring            | check_local_space         | checking local space on /var/lib/boinc-client/slots/32
[2021-07-22 08:00:05] 2021-07-22 11:59:57,175 | INFO     | pilot.util.monitoring            | check_local_space         | sufficient remaining disk space (29964107776 B)
[2021-07-22 08:00:05] 2021-07-22 11:59:57,176 | WARNING  | pilot.control.job                | proceed_with_getjob       | since timefloor is set to 0, pilot was only allowed to run one job
[2021-07-22 08:00:05] 2021-07-22 11:59:57,176 | DEBUG    | pilot.control.job                | retrieve                  | will not set job_aborted yet
[2021-07-22 08:00:05] 2021-07-22 11:59:57,176 | DEBUG    | pilot.control.job                | retrieve                  | [job] retrieve thread has finished
[2021-07-22 08:00:05] 2021-07-22 11:59:57,177 | WARNING  | pilot.control.monitor            | control                   | aborting monitor loop since graceful_stop has been set
[2021-07-22 08:00:05] 2021-07-22 11:59:57,177 | INFO     | pilot.control.monitor            | control                   | [monitor] control thread has ended
[2021-07-22 08:00:05] 2021-07-22 11:59:57,177 | WARNING  | pilot.util.common                | should_abort              | data:queue_monitoring:received graceful stop - abort after this iteration
[2021-07-22 08:00:05] 2021-07-22 11:59:57,227 | DEBUG    | pilot.control.payload            | execute_payloads          | will not set job_aborted yet
[2021-07-22 08:00:05] 2021-07-22 11:59:57,228 | INFO     | pilot.control.payload            | execute_payloads          | [payload] execute_payloads thread has finished
[2021-07-22 08:00:05] 2021-07-22 11:59:57,264 | DEBUG    | pilot.control.payload            | validate_post             | will not set job_aborted yet
[2021-07-22 08:00:05] 2021-07-22 11:59:57,264 | INFO     | pilot.control.payload            | validate_post             | [payload] validate_post thread has finished
[2021-07-22 08:00:05] 2021-07-22 11:59:57,607 | DEBUG    | pilot.control.job                | create_data_payload       | will not set job_aborted yet
[2021-07-22 08:00:05] 2021-07-22 11:59:57,608 | DEBUG    | pilot.control.job                | create_data_payload       | [job] create_data_payload thread has finished
[2021-07-22 08:00:05] 2021-07-22 11:59:57,784 | DEBUG    | pilot.control.data               | control                   | data control ending since graceful_stop has been set
[2021-07-22 08:00:05] 2021-07-22 11:59:57,784 | DEBUG    | pilot.control.data               | control                   | will not set job_aborted yet
[2021-07-22 08:00:05] 2021-07-22 11:59:57,785 | DEBUG    | pilot.control.data               | control                   | [data] control thread has finished
[2021-07-22 08:00:05] 2021-07-22 11:59:57,827 | DEBUG    | pilot.control.payload            | validate_pre              | will not set job_aborted yet
[2021-07-22 08:00:05] 2021-07-22 11:59:57,827 | INFO     | pilot.control.payload            | validate_pre              | [payload] validate_pre thread has finished
[2021-07-22 08:00:05] 2021-07-22 11:59:58,082 | DEBUG    | pilot.control.payload            | control                   | payload control ending since graceful_stop has been set
[2021-07-22 08:00:05] 2021-07-22 11:59:58,082 | DEBUG    | pilot.control.payload            | control                   | will not set job_aborted yet
[2021-07-22 08:00:05] 2021-07-22 11:59:58,083 | DEBUG    | pilot.control.payload            | control                   | [payload] control thread has finished
[2021-07-22 08:00:05] 2021-07-22 11:59:58,160 | DEBUG    | pilot.control.job                | control                   | job control ending since graceful_stop has been set
[2021-07-22 08:00:05] 2021-07-22 11:59:58,160 | DEBUG    | pilot.control.job                | control                   | will not set job_aborted yet
[2021-07-22 08:00:05] 2021-07-22 11:59:58,160 | DEBUG    | pilot.control.job                | control                   | [job] control thread has finished
[2021-07-22 08:00:05] 2021-07-22 11:59:58,260 | DEBUG    | pilot.control.job                | validate                  | will not set job_aborted yet
[2021-07-22 08:00:05] 2021-07-22 11:59:58,261 | DEBUG    | pilot.control.job                | validate                  | [job] validate thread has finished
[2021-07-22 08:00:05] 2021-07-22 11:59:58,400 | WARNING  | pilot.util.common                | should_abort              | job:queue_monitor:received graceful stop - abort after this iteration
[2021-07-22 08:00:05] 2021-07-22 11:59:58,401 | DEBUG    | pilot.control.job                | queue_monitor             | will not set job_aborted yet
[2021-07-22 08:00:05] 2021-07-22 11:59:58,401 | DEBUG    | pilot.control.job                | queue_monitor             | [job] queue monitor thread has finished
[2021-07-22 08:00:05] 2021-07-22 11:59:58,436 | DEBUG    | pilot.control.data               | copytool_in               | will not set job_aborted yet
[2021-07-22 08:00:05] 2021-07-22 11:59:58,441 | DEBUG    | pilot.control.data               | copytool_in               | [data] copytool_in thread has finished
[2021-07-22 08:00:05] 2021-07-22 11:59:58,607 | WARNING  | pilot.util.common                | should_abort              | data:copytool_out:received graceful stop - abort after this iteration
[2021-07-22 08:00:05] 2021-07-22 11:59:58,669 | DEBUG    | pilot.control.payload            | failed_post               | will not set job_aborted yet
[2021-07-22 08:00:05] 2021-07-22 11:59:58,670 | INFO     | pilot.control.payload            | failed_post               | [payload] failed_post thread has finished
[2021-07-22 08:00:05] 2021-07-22 11:59:59,609 | DEBUG    | pilot.control.data               | copytool_out              | will not set job_aborted yet
[2021-07-22 08:00:05] 2021-07-22 11:59:59,611 | DEBUG    | pilot.control.data               | copytool_out              | [data] copytool_out thread has finished
[2021-07-22 08:00:05] 2021-07-22 12:00:00,179 | DEBUG    | pilot.control.data               | queue_monitoring          | will not set job_aborted yet
[2021-07-22 08:00:05] 2021-07-22 12:00:00,180 | DEBUG    | pilot.control.data               | queue_monitoring          | [data] queue_monitor thread has finished
[2021-07-22 08:00:05] 2021-07-22 12:00:02,453 | WARNING  | pilot.control.job                | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 75 s)
[2021-07-22 08:00:05] 2021-07-22 12:00:02,455 | DEBUG    | pilot.util.processes             | threads_aborted           | aborting since the last relevant thread is about to finish
[2021-07-22 08:00:05] 2021-07-22 12:00:02,455 | DEBUG    | pilot.control.job                | job_monitor               | will proceed to set job_aborted
[2021-07-22 08:00:05] 2021-07-22 12:00:02,456 | DEBUG    | pilot.control.job                | job_monitor               | [job] job monitor thread has finished
[2021-07-22 08:00:05] 2021-07-22 12:00:02,970 | INFO     | pilot.workflow.generic           | run                       | end of generic workflow (traces error code: 0)
[2021-07-22 08:00:05] 2021-07-22 12:00:02,973 | INFO     | root                             | wrap_up                   | traces error code: 0
[2021-07-22 08:00:05] 2021-07-22 12:00:02,975 | INFO     | root                             | wrap_up                   | pilot has finished
[2021-07-22 08:00:05] 2021-07-22 12:00:03,368 [wrapper] ==== pilot stdout END ====
[2021-07-22 08:00:05] 2021-07-22 12:00:03,444 [wrapper] ==== wrapper stdout RESUME ====
[2021-07-22 08:00:05] 2021-07-22 12:00:03,546 [wrapper] Pilot exit status: 0
[2021-07-22 08:00:05] 2021-07-22 12:00:03,898 [wrapper] pandaids: 5127731325
[2021-07-22 08:00:05] 2021-07-22 12:00:04,045 [wrapper] apfmon messages muted
[2021-07-22 08:00:05] 2021-07-22 12:00:04,119 [wrapper] Test setup, not cleaning
[2021-07-22 08:00:05] 2021-07-22 12:00:04,202 [wrapper] ==== wrapper stdout END ====
[2021-07-22 08:00:05] 2021-07-22 12:00:04,314 [wrapper] ==== wrapper stderr END ====
[2021-07-22 08:00:05] 2021-07-22 12:00:04,437 [wrapper] wrapperexiting ec=0, duration=4055
[2021-07-22 08:00:05] 2021-07-22 12:00:04,503 [wrapper] apfmon messages muted
[2021-07-22 08:00:05]  *** Error codes and diagnostics ***
[2021-07-22 08:00:05]     "exeErrorCode": 0,
[2021-07-22 08:00:05]     "exeErrorDiag": "",
[2021-07-22 08:00:05]     "pilotErrorCode": 0,
[2021-07-22 08:00:05]     "pilotErrorDiag": "",
[2021-07-22 08:00:05]  *** Listing of results directory ***
[2021-07-22 08:00:05] total 46760
[2021-07-22 08:00:05] -rw-r--r-- 1 boinc boinc   343045 Jul 21 09:05 pilot2.tar.gz
[2021-07-22 08:00:05] -rwx------ 1 boinc boinc    20589 Jul 22 06:36 runpilot2-wrapper.sh
[2021-07-22 08:00:05] -rw-r--r-- 1 boinc boinc     3214 Jul 22 06:36 queuedata.json
[2021-07-22 08:00:05] -rw-r--r-- 1 boinc boinc      107 Jul 22 06:52 wrapper_26015_x86_64-pc-linux-gnu
[2021-07-22 08:00:05] -rwxr-xr-x 1 boinc boinc     6966 Jul 22 06:52 run_atlas
[2021-07-22 08:00:05] -rw-r--r-- 1 boinc boinc      112 Jul 22 06:52 job.xml
[2021-07-22 08:00:05] drwxrwx--x 2 boinc boinc     4096 Jul 22 06:52 shared
[2021-07-22 08:00:05] -rw-r--r-- 1 boinc boinc     6188 Jul 22 06:52 init_data.xml
[2021-07-22 08:00:05] -rw-r--r-- 1 boinc boinc        0 Jul 22 06:52 boinc_lockfile
[2021-07-22 08:00:05] -rw-r--r-- 1 boinc boinc    16569 Jul 22 06:52 start_atlas.sh
[2021-07-22 08:00:05] -rw-r--r-- 1 boinc boinc   352971 Jul 22 06:52 input.tar.gz
[2021-07-22 08:00:05] -rw-r--r-- 1 boinc boinc 39611081 Jul 22 06:52 EVNT.04972714._000022.pool.root.1
[2021-07-22 08:00:05] -rw-r--r-- 1 boinc boinc     2595 Jul 22 06:52 pandaJob.out
[2021-07-22 08:00:05] -rw------- 1 boinc boinc  1069008 Jul 22 06:54 agis_schedconf.cvmfs.json
[2021-07-22 08:00:05] -rw------- 1 boinc boinc  1961522 Jul 22 06:54 cric_ddmendpoints.json
[2021-07-22 08:00:05] drwx------ 4 boinc boinc     4096 Jul 22 06:54 pilot2
[2021-07-22 08:00:05] -rw------- 1 boinc boinc  1549091 Jul 22 07:59 output.1.b3d9322e-b2c7-4107-80a7-78d34810baa7_13150.pool.root
[2021-07-22 08:00:05] -rw-r--r-- 1 boinc boinc      535 Jul 22 07:59 boinc_task_state.xml
[2021-07-22 08:00:05] -rw------- 1 boinc boinc     1015 Jul 22 07:59 memory_monitor_summary.json
[2021-07-22 08:00:05] -rw------- 1 boinc boinc   193078 Jul 22 07:59 b3d9322e-b2c7-4107-80a7-78d34810baa7_13150.1.job.log.tgz
[2021-07-22 08:00:05] -rw-r--r-- 1 boinc boinc     8192 Jul 22 07:59 boinc_mmap_file
[2021-07-22 08:00:05] -rw-r--r-- 1 boinc boinc       26 Jul 22 07:59 wrapper_checkpoint.txt
[2021-07-22 08:00:05] -rw------- 1 boinc boinc     7336 Jul 22 07:59 heartbeat.json
[2021-07-22 08:00:05] -rw------- 1 boinc boinc     7522 Jul 22 08:00 pilotlog.txt
[2021-07-22 08:00:05] -rw------- 1 boinc boinc   418573 Jul 22 08:00 b3d9322e-b2c7-4107-80a7-78d34810baa7_13150.1.job.log
[2021-07-22 08:00:05] -rw------- 1 boinc boinc      536 Jul 22 08:00 output.list
[2021-07-22 08:00:05] -rw-r--r-- 1 boinc boinc      748 Jul 22 08:00 runtime_log
[2021-07-22 08:00:05] -rw------- 1 boinc boinc  2181120 Jul 22 08:00 result.tar.gz
[2021-07-22 08:00:05] -rw-r--r-- 1 boinc boinc     9434 Jul 22 08:00 runtime_log.err
[2021-07-22 08:00:05] -rw------- 1 boinc boinc      564 Jul 22 08:00 c15NDmxElQzn7Olcko1bjSoqABFKDmABFKDmumdXDmlFGKDm7iH3Fn.diag
[2021-07-22 08:00:05] -rw-r--r-- 1 boinc boinc    30466 Jul 22 08:00 stderr.txt
[2021-07-22 08:00:05] HITS file was successfully produced:
[2021-07-22 08:00:05] -rw------- 1 boinc boinc 1549091 Jul 22 07:59 shared/HITS.pool.root.1
[2021-07-22 08:00:05]  *** Contents of shared directory: ***
[2021-07-22 08:00:05] total 42700
[2021-07-22 08:00:05] -rw-r--r-- 1 boinc boinc 39611081 Jul 22 06:52 ATLAS.root_0
[2021-07-22 08:00:05] -rw-r--r-- 1 boinc boinc    16569 Jul 22 06:52 start_atlas.sh
[2021-07-22 08:00:05] -rw-r--r-- 1 boinc boinc   352971 Jul 22 06:52 input.tar.gz
[2021-07-22 08:00:05] -rw------- 1 boinc boinc  1549091 Jul 22 07:59 HITS.pool.root.1
[2021-07-22 08:00:05] -rw------- 1 boinc boinc  2181120 Jul 22 08:00 result.tar.gz
08:00:07 (14524): run_atlas exited; CPU time 2106.763913
08:00:07 (14524): called boinc_finish(0)

</stderr_txt>
]]>


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