Name | bcXKDmIPxQzn7Olcko1bjSoqABFKDmABFKDmumdXDmaGGKDm4SVjIm_0 |
Workunit | 2108896 |
Created | 22 Jul 2021, 23:35:43 UTC |
Sent | 22 Jul 2021, 23:39:41 UTC |
Report deadline | 29 Jul 2021, 23:39:41 UTC |
Received | 23 Jul 2021, 0:45:47 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 4357 |
Run time | 1 hours 4 min 6 sec |
CPU time | 21 min 30 sec |
Validate state | Valid |
Credit | 14.74 |
Device peak FLOPS | 3.04 GFLOPS |
Application version | ATLAS Simulation v1.04 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.65 GB |
Peak swap size | 30.46 GB |
Peak disk usage | 82.18 MB |
<core_client_version>7.9.3</core_client_version> <![CDATA[ <stderr_txt> 19:40:45 (85443): wrapper (7.7.26015): starting 19:40:45 (85443): wrapper: running run_atlas (--nthreads 1) [2021-07-22 19:40:45] Arguments: --nthreads 1 [2021-07-22 19:40:45] Threads: 1 [2021-07-22 19:40:45] Checking for CVMFS [2021-07-22 19:40:46] Probing /cvmfs/atlas.cern.ch... OK [2021-07-22 19:40:46] Probing /cvmfs/atlas-condb.cern.ch... OK [2021-07-22 19:40:46] Running cvmfs_config stat atlas.cern.ch [2021-07-22 19:40:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2021-07-22 19:40:47] 2.9.0.0 40336 9 36680 88851 2 28 3924224 4194304 570 130560 0 49765 99.967 2749 1713 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 0 [2021-07-22 19:40:47] CVMFS is ok [2021-07-22 19:40:47] Efficiency of ATLAS tasks can be improved by the following measure(s): [2021-07-22 19:40:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io. [2021-07-22 19:40:47] Small home clusters do not require a local http proxy but it is suggested if [2021-07-22 19:40:47] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks. [2021-07-22 19:40:47] Further information can be found at the LHC@home message board. [2021-07-22 19:40:47] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2021-07-22 19:40:47] Checking for singularity binary... [2021-07-22 19:40:47] Using singularity found in PATH at /usr/local/bin/singularity [2021-07-22 19:40:47] Running /usr/local/bin/singularity --version [2021-07-22 19:40:47] singularity version 3.7.2+10-ga969f0f8c [2021-07-22 19:40:47] Checking singularity works with /usr/local/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2021-07-22 19:40:49] E5-2670 [2021-07-22 19:40:49] Singularity works [2021-07-22 19:40:49] Starting ATLAS job with PandaID=5128259309 [2021-07-22 19:40:49] Running command: /usr/local/bin/singularity exec --pwd /var/lib/boinc-client/slots/33 -B /cvmfs,/var /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2021-07-22 20:44:48] *** The last 200 lines of the pilot log: *** [2021-07-22 20:44:48] "model": "45", [2021-07-22 20:44:48] "model_name": "Intel(R) Xeon(R) CPU E5-2670 0 @ 2.60GHz", [2021-07-22 20:44:48] "node": "E5-2670", [2021-07-22 20:44:48] "platform": "Linux-4.15.0-142-generic-x86_64-with-centos-7.8.2003-Core" [2021-07-22 20:44:48] }, [2021-07-22 20:44:48] "transform": { [2021-07-22 20:44:48] "cpuTime": 9, [2021-07-22 20:44:48] "externalCpuTime": 67, [2021-07-22 20:44:48] "wallTime": 3536 [2021-07-22 20:44:48] } [2021-07-22 20:44:48] } [2021-07-22 20:44:48] } [2021-07-22 20:44:48] 2021-07-23 00:43:52,139 | DEBUG | pilot.user.atlas.common | update_server | no need to update logstash for this job [2021-07-22 20:44:48] 2021-07-23 00:43:52,139 | INFO | pilot.control.job | send_state | pilot will not update the server (heartbeat message will be written to file) [2021-07-22 20:44:48] 2021-07-23 00:43:52,139 | INFO | pilot.control.job | send_state | job 5128259309 has finished - writing final server update [2021-07-22 20:44:48] 2021-07-23 00:43:52,140 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics_string | job definition core count: 1 [2021-07-22 20:44:48] 2021-07-23 00:43:52,140 | INFO | pilot.user.atlas.jobmetrics | get_job_metrics_string | will not add max space = -37444358 B to job metrics [2021-07-22 20:44:48] 2021-07-23 00:43:52,142 | DEBUG | pilot.api.analytics | get_fitted_data | removing tails from data to be fitted [2021-07-22 20:44:48] 2021-07-23 00:43:52,142 | INFO | pilot.api.analytics | get_fitted_data | fitting pss+swap vs Time [2021-07-22 20:44:48] 2021-07-23 00:43:52,143 | INFO | pilot.api.analytics | get_fitted_data | current memory leak: 394.86 B/s (using 52 data points, chi2=747904) [2021-07-22 20:44:48] 2021-07-23 00:43:52,144 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics | job metrics="actualCoreCount=4 nEvents=2 dbTime=338.11 dbData=4211388 leak=394.86 chi2=747904 eventn [2021-07-22 20:44:48] 2021-07-23 00:43:52,144 | INFO | pilot.control.job | get_data_structure | mean actualcorecount: 6.734694 [2021-07-22 20:44:48] 2021-07-23 00:43:52,144 | INFO | pilot.control.job | get_data_structure | total number of processed events: 2 (read) [2021-07-22 20:44:48] 2021-07-23 00:43:52,170 | INFO | pilot.util.container | execute | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2021-07-22 20:44:48] 2021-07-23 00:43:52,352 | INFO | pilot.user.atlas.utilities | get_memory_values | using path: /var/lib/boinc-client/slots/33/PanDA_Pilot-5128259309/memory_monitor_summary.json (trf n [2021-07-22 20:44:48] 2021-07-23 00:43:52,359 | DEBUG | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'Avg': {'nprocs': 5.101, 'nthreads': 6.067, 'pss': 1251997.0, 'rchar': 125230.0, [2021-07-22 20:44:48] 2021-07-23 00:43:52,362 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard info from prmon json [2021-07-22 20:44:48] 2021-07-23 00:43:52,363 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard memory fields from prmon json [2021-07-22 20:44:48] 2021-07-23 00:43:52,364 | INFO | pilot.util.timing | timing_report | .............................. [2021-07-22 20:44:48] 2021-07-23 00:43:52,365 | INFO | pilot.util.timing | timing_report | . Timing measurements: [2021-07-22 20:44:48] 2021-07-23 00:43:52,365 | INFO | pilot.util.timing | timing_report | . get job = 0 s [2021-07-22 20:44:48] 2021-07-23 00:43:52,366 | INFO | pilot.util.timing | timing_report | . initial setup = 1 s [2021-07-22 20:44:48] 2021-07-23 00:43:52,366 | INFO | pilot.util.timing | timing_report | . payload setup = 67 s [2021-07-22 20:44:48] 2021-07-23 00:43:52,366 | INFO | pilot.util.timing | timing_report | . total setup = 68 s [2021-07-22 20:44:48] 2021-07-23 00:43:52,367 | INFO | pilot.util.timing | timing_report | . stage-in = 0 s [2021-07-22 20:44:48] 2021-07-23 00:43:52,367 | INFO | pilot.util.timing | timing_report | . payload execution = 3620 s [2021-07-22 20:44:48] 2021-07-23 00:43:52,368 | INFO | pilot.util.timing | timing_report | . stage-out = 1 s [2021-07-22 20:44:48] 2021-07-23 00:43:52,368 | INFO | pilot.util.timing | timing_report | .............................. [2021-07-22 20:44:48] 2021-07-23 00:43:52,369 | DEBUG | pilot.control.job | send_state | is_harvester_mode(args) : False [2021-07-22 20:44:48] 2021-07-23 00:43:52,373 | DEBUG | pilot.control.job | write_heartbeat_to_file | heartbeat dictionary: {'jobId': '5128259309', 'state': 'finished', 'timestamp': '2021-07-22T20:43:52 [2021-07-22 20:44:48] 2021-07-23 00:43:52,376 | DEBUG | pilot.control.job | write_heartbeat_to_file | wrote heartbeat to file /var/lib/boinc-client/slots/33/heartbeat.json [2021-07-22 20:44:48] 2021-07-23 00:43:52,377 | DEBUG | pilot.control.job | queue_monitor | job 5128259309 was dequeued from the monitored payloads queue [2021-07-22 20:44:48] 2021-07-23 00:43:53,107 | DEBUG | pilot.control.job | queue_monitor | tmp job object deleted [2021-07-22 20:44:48] 2021-07-23 00:43:53,109 | INFO | pilot.control.job | make_job_report | [2021-07-22 20:44:48] 2021-07-23 00:43:53,110 | INFO | pilot.control.job | make_job_report | job summary report [2021-07-22 20:44:48] 2021-07-23 00:43:53,110 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2021-07-22 20:44:48] 2021-07-23 00:43:53,111 | INFO | pilot.control.job | make_job_report | PanDA job id: 5128259309 [2021-07-22 20:44:48] 2021-07-23 00:43:53,112 | INFO | pilot.control.job | make_job_report | task id: NULL [2021-07-22 20:44:48] 2021-07-23 00:43:53,113 | INFO | pilot.control.job | make_job_report | errors: (none) [2021-07-22 20:44:48] 2021-07-23 00:43:53,113 | INFO | pilot.control.job | make_job_report | status: LOG_TRANSFER = DONE [2021-07-22 20:44:48] 2021-07-23 00:43:53,113 | INFO | pilot.control.job | make_job_report | pilot state: finished [2021-07-22 20:44:48] 2021-07-23 00:43:53,114 | INFO | pilot.control.job | make_job_report | transexitcode: 0 [2021-07-22 20:44:48] 2021-07-23 00:43:53,114 | INFO | pilot.control.job | make_job_report | exeerrorcode: 0 [2021-07-22 20:44:48] 2021-07-23 00:43:53,114 | INFO | pilot.control.job | make_job_report | exeerrordiag: [2021-07-22 20:44:48] 2021-07-23 00:43:53,114 | INFO | pilot.control.job | make_job_report | exitcode: 0 [2021-07-22 20:44:48] 2021-07-23 00:43:53,114 | INFO | pilot.control.job | make_job_report | exitmsg: OK [2021-07-22 20:44:48] 2021-07-23 00:43:53,114 | INFO | pilot.control.job | make_job_report | cpuconsumptiontime: 1385 s [2021-07-22 20:44:48] 2021-07-23 00:43:53,115 | INFO | pilot.control.job | make_job_report | nevents: 2 [2021-07-22 20:44:48] 2021-07-23 00:43:53,115 | INFO | pilot.control.job | make_job_report | neventsw: 0 [2021-07-22 20:44:48] 2021-07-23 00:43:53,115 | INFO | pilot.control.job | make_job_report | pid: 100446 [2021-07-22 20:44:48] 2021-07-23 00:43:53,116 | INFO | pilot.control.job | make_job_report | pgrp: 100446 [2021-07-22 20:44:48] 2021-07-23 00:43:53,116 | INFO | pilot.control.job | make_job_report | corecount: 1 [2021-07-22 20:44:48] 2021-07-23 00:43:53,116 | INFO | pilot.control.job | make_job_report | event service: False [2021-07-22 20:44:48] 2021-07-23 00:43:53,117 | INFO | pilot.control.job | make_job_report | sizes: {24730419: 3855486, 24730420: 3855594, 24730431: 3855594, 24734119: 3882973, 24734120: 388297 [2021-07-22 20:44:48] 2021-07-23 00:43:53,117 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2021-07-22 20:44:48] 2021-07-23 00:43:53,118 | INFO | pilot.control.job | make_job_report | [2021-07-22 20:44:48] 2021-07-23 00:43:53,118 | DEBUG | pilot.control.job | has_job_completed | ls -lF /var/lib/boinc-client/slots/33: [2021-07-22 20:44:48] [2021-07-22 20:44:48] 2021-07-23 00:43:53,119 | INFO | pilot.util.container | execute | executing command: ls -lF /var/lib/boinc-client/slots/33 [2021-07-22 20:44:48] 2021-07-23 00:43:53,331 | DEBUG | pilot.control.job | has_job_completed | total 43952 [2021-07-22 20:44:48] -rw------- 1 boinc boinc 1068997 Jul 22 19:42 agis_schedconf.cvmfs.json [2021-07-22 20:44:48] -rw------- 1 boinc boinc 130 Jul 22 19:40 bcXKDmIPxQzn7Olcko1bjSoqABFKDmABFKDmumdXDmaGGKDm4SVjIm.diag [2021-07-22 20:44:48] -rw------- 1 boinc boinc 397358 Jul 22 20:43 bf61cd60-7a71-4b0b-80c2-7dffe842c919_58309.1.job.log [2021-07-22 20:44:48] -rw------- 1 boinc boinc 198414 Jul 22 20:43 bf61cd60-7a71-4b0b-80c2-7dffe842c919_58309.1.job.log.tgz [2021-07-22 20:44:48] -rw-r--r-- 1 boinc boinc 0 Jul 22 19:40 boinc_lockfile [2021-07-22 20:44:48] -rw-r--r-- 1 boinc boinc 8192 Jul 22 20:43 boinc_mmap_file [2021-07-22 20:44:48] -rw-r--r-- 1 boinc boinc 535 Jul 22 20:42 boinc_task_state.xml [2021-07-22 20:44:48] -rw------- 1 boinc boinc 1961522 Jul 22 19:42 cric_ddmendpoints.json [2021-07-22 20:44:48] -rw-r--r-- 1 boinc boinc 38705932 Jul 22 19:40 EVNT.04972714._000036.pool.root.1 [2021-07-22 20:44:48] -rw------- 1 boinc boinc 7823 Jul 22 20:43 heartbeat.json [2021-07-22 20:44:48] -rw-r--r-- 1 boinc boinc 6188 Jul 22 19:40 init_data.xml [2021-07-22 20:44:48] -rw-r--r-- 1 boinc boinc 350445 Jul 22 19:40 input.tar.gz [2021-07-22 20:44:48] -rw-r--r-- 1 boinc boinc 112 Jul 22 19:40 job.xml [2021-07-22 20:44:48] -rw------- 1 boinc boinc 1017 Jul 22 20:43 memory_monitor_summary.json [2021-07-22 20:44:48] -rw------- 1 boinc boinc 1441786 Jul 22 20:41 output.1.bf61cd60-7a71-4b0b-80c2-7dffe842c919_58309.pool.root [2021-07-22 20:44:48] -rw------- 1 boinc boinc 536 Jul 22 20:43 output.list [2021-07-22 20:44:48] -rw-r--r-- 1 boinc boinc 2580 Jul 22 19:40 pandaJob.out [2021-07-22 20:44:48] drwxrwx--- 2 boinc boinc 4096 Jul 22 20:43 PanDA_Pilot-5128259309/ [2021-07-22 20:44:48] drwx------ 4 boinc boinc 4096 Jul 22 19:42 pilot2/ [2021-07-22 20:44:48] -rw-r--r-- 1 boinc boinc 340725 Jul 22 19:27 pilot2.tar.gz [2021-07-22 20:44:48] -rw------- 1 boinc boinc 378095 Jul 22 20:43 pilotlog.txt [2021-07-22 20:44:48] -rw-r--r-- 1 boinc boinc 3214 Jul 22 19:35 queuedata.json [2021-07-22 20:44:48] -rwxr-xr-x 1 boinc boinc 6966 Jul 22 19:40 run_atlas* [2021-07-22 20:44:48] -rwx------ 1 boinc boinc 20589 Jul 22 19:35 runpilot2-wrapper.sh* [2021-07-22 20:44:48] -rw-r--r-- 1 boinc boinc 407 Jul 22 19:40 runtime_log [2021-07-22 20:44:48] -rw-r--r-- 1 boinc boinc 5586 Jul 22 19:40 runtime_log.err [2021-07-22 20:44:48] drwxrwx--x 2 boinc boinc 4096 Jul 22 19:40 shared/ [2021-07-22 20:44:48] -rw-r--r-- 1 boinc boinc 16583 Jul 22 19:40 start_atlas.sh [2021-07-22 20:44:48] -rw-r--r-- 1 boinc boinc 2205 Jul 22 19:40 stderr.txt [2021-07-22 20:44:48] -rw-r--r-- 1 boinc boinc 107 Jul 22 19:40 wrapper_26015_x86_64-pc-linux-gnu [2021-07-22 20:44:48] -rw-r--r-- 1 boinc boinc 26 Jul 22 20:43 wrapper_checkpoint.txt [2021-07-22 20:44:48] 2021-07-23 00:43:53,333 | INFO | pilot.util.queuehandling | queue_report | queue jobs has 0 job(s) [2021-07-22 20:44:48] 2021-07-23 00:43:53,333 | INFO | pilot.util.queuehandling | queue_report | queue payloads has 0 job(s) [2021-07-22 20:44:48] 2021-07-23 00:43:53,334 | INFO | pilot.util.queuehandling | queue_report | queue data_in has 0 job(s) [2021-07-22 20:44:48] 2021-07-23 00:43:53,334 | INFO | pilot.util.queuehandling | queue_report | queue data_out has 0 job(s) [2021-07-22 20:44:48] 2021-07-23 00:43:53,334 | INFO | pilot.util.queuehandling | queue_report | queue current_data_in has 0 job(s) [2021-07-22 20:44:48] 2021-07-23 00:43:53,334 | INFO | pilot.util.queuehandling | queue_report | queue validated_jobs has 0 job(s) [2021-07-22 20:44:48] 2021-07-23 00:43:53,335 | INFO | pilot.util.queuehandling | queue_report | queue validated_payloads has 0 job(s) [2021-07-22 20:44:48] 2021-07-23 00:43:53,335 | INFO | pilot.util.queuehandling | queue_report | queue monitored_payloads has 0 job(s) [2021-07-22 20:44:48] 2021-07-23 00:43:53,335 | INFO | pilot.util.queuehandling | queue_report | queue finished_jobs has 0 job(s) [2021-07-22 20:44:48] 2021-07-23 00:43:53,335 | INFO | pilot.util.queuehandling | queue_report | queue finished_payloads has 0 job(s) [2021-07-22 20:44:48] 2021-07-23 00:43:53,336 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_in has 1 job(s) [2021-07-22 20:44:48] 2021-07-23 00:43:53,336 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_out has 0 job(s) [2021-07-22 20:44:48] 2021-07-23 00:43:53,336 | INFO | pilot.util.queuehandling | queue_report | queue failed_jobs has 0 job(s) [2021-07-22 20:44:48] 2021-07-23 00:43:53,336 | INFO | pilot.util.queuehandling | queue_report | queue failed_payloads has 0 job(s) [2021-07-22 20:44:48] 2021-07-23 00:43:53,337 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_in has 0 job(s) [2021-07-22 20:44:48] 2021-07-23 00:43:53,337 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_out has 0 job(s) [2021-07-22 20:44:48] 2021-07-23 00:43:53,337 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobs has 0 job(s) [2021-07-22 20:44:48] 2021-07-23 00:43:53,338 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s) [2021-07-22 20:44:48] 2021-07-23 00:43:53,338 | INFO | pilot.control.job | has_job_completed | job 5128259309 has completed (purged errors) [2021-07-22 20:44:48] 2021-07-23 00:43:53,338 | INFO | pilot.util.processes | cleanup | overall cleanup function is called [2021-07-22 20:44:48] 2021-07-23 00:43:53,354 | DEBUG | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc-client/slots/33/PanDA_Pilot-5128259309 [2021-07-22 20:44:48] 2021-07-23 00:43:54,361 | INFO | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [100446] [2021-07-22 20:44:48] 2021-07-23 00:43:54,362 | INFO | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 100446 [2021-07-22 20:44:48] 2021-07-23 00:43:54,363 | INFO | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes [2021-07-22 20:44:48] 2021-07-23 00:43:55,369 | INFO | pilot.util.processes | cleanup | collected zombie processes [2021-07-22 20:44:48] 2021-07-23 00:43:55,372 | INFO | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=100446 [2021-07-22 20:44:48] 2021-07-23 00:43:56,065 | INFO | pilot.util.processes | kill_processes | process IDs to be killed: [100446] (in reverse order) [2021-07-22 20:44:48] 2021-07-23 00:43:56,936 | WARNING | pilot.util.processes | kill_processes | found no corresponding commands to process id(s) [2021-07-22 20:44:48] 2021-07-23 00:43:56,941 | INFO | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs [2021-07-22 20:44:48] 2021-07-23 00:43:56,943 | DEBUG | pilot.util.queuehandling | purge_queue | queue purged [2021-07-22 20:44:48] 2021-07-23 00:43:56,948 | INFO | pilot.control.job | retrieve | ready for new job [2021-07-22 20:44:48] 2021-07-23 00:43:56,950 | INFO | root | retrieve | pilot has finished for previous job - re-establishing logging [2021-07-22 20:44:48] 2021-07-23 00:43:56,958 | INFO | pilot.util.auxiliary | pilot_version_banner | ***************************************** [2021-07-22 20:44:48] 2021-07-23 00:43:56,961 | INFO | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 2.12.3 (13) *** [2021-07-22 20:44:48] 2021-07-23 00:43:56,961 | INFO | pilot.util.auxiliary | pilot_version_banner | ***************************************** [2021-07-22 20:44:48] 2021-07-23 00:43:56,962 | INFO | pilot.util.auxiliary | pilot_version_banner | [2021-07-22 20:44:48] 2021-07-23 00:43:56,988 | INFO | pilot.util.auxiliary | display_architecture_info | architecture information: [2021-07-22 20:44:48] 2021-07-23 00:43:58,820 | INFO | pilot.util.auxiliary | display_architecture_info | [2021-07-22 20:44:48] LSB Version: :core-4.1-amd64:core-4.1-noarch [2021-07-22 20:44:48] Distributor ID: CentOS [2021-07-22 20:44:48] Description: CentOS Linux release 7.8.2003 (Core) [2021-07-22 20:44:48] Release: 7.8.2003 [2021-07-22 20:44:48] Codename: Core [2021-07-22 20:44:48] 2021-07-23 00:43:58,821 | INFO | pilot.util.auxiliary | pilot_version_banner | ***************************************** [2021-07-22 20:44:48] 2021-07-23 00:43:59,324 | DEBUG | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc-client/slots/33 [2021-07-22 20:44:48] 2021-07-23 00:43:59,385 | INFO | pilot.util.monitoring | check_local_space | sufficient remaining disk space (41874882560 B) [2021-07-22 20:44:48] 2021-07-23 00:43:59,385 | WARNING | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job [2021-07-22 20:44:48] 2021-07-23 00:43:59,386 | DEBUG | pilot.control.job | retrieve | will not set job_aborted yet [2021-07-22 20:44:48] 2021-07-23 00:43:59,386 | DEBUG | pilot.control.job | retrieve | [job] retrieve thread has finished [2021-07-22 20:44:48] 2021-07-23 00:43:59,392 | DEBUG | pilot.control.job | control | job control ending since graceful_stop has been set [2021-07-22 20:44:48] 2021-07-23 00:43:59,393 | DEBUG | pilot.control.job | control | will not set job_aborted yet [2021-07-22 20:44:48] 2021-07-23 00:43:59,393 | DEBUG | pilot.control.job | control | [job] control thread has finished [2021-07-22 20:44:48] 2021-07-23 00:43:59,557 | DEBUG | pilot.control.job | create_data_payload | will not set job_aborted yet [2021-07-22 20:44:48] 2021-07-23 00:43:59,557 | DEBUG | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished [2021-07-22 20:44:48] 2021-07-23 00:43:59,559 | DEBUG | pilot.control.data | control | data control ending since graceful_stop has been set [2021-07-22 20:44:48] 2021-07-23 00:43:59,560 | DEBUG | pilot.control.data | control | will not set job_aborted yet [2021-07-22 20:44:48] 2021-07-23 00:43:59,560 | DEBUG | pilot.control.data | control | [data] control thread has finished [2021-07-22 20:44:48] 2021-07-23 00:43:59,573 | INFO | pilot.control.monitor | control | [monitor] control thread has ended [2021-07-22 20:44:48] 2021-07-23 00:43:59,624 | WARNING | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration [2021-07-22 20:44:48] 2021-07-23 00:43:59,856 | WARNING | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration [2021-07-22 20:44:48] 2021-07-23 00:43:59,993 | DEBUG | pilot.control.payload | failed_post | will not set job_aborted yet [2021-07-22 20:44:48] 2021-07-23 00:43:59,994 | INFO | pilot.control.payload | failed_post | [payload] failed_post thread has finished [2021-07-22 20:44:48] 2021-07-23 00:44:00,020 | DEBUG | pilot.control.payload | control | payload control ending since graceful_stop has been set [2021-07-22 20:44:48] 2021-07-23 00:44:00,021 | DEBUG | pilot.control.payload | control | will not set job_aborted yet [2021-07-22 20:44:48] 2021-07-23 00:44:00,021 | DEBUG | pilot.control.payload | control | [payload] control thread has finished [2021-07-22 20:44:48] 2021-07-23 00:44:00,063 | DEBUG | pilot.control.payload | validate_pre | will not set job_aborted yet [2021-07-22 20:44:48] 2021-07-23 00:44:00,064 | INFO | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished [2021-07-22 20:44:48] 2021-07-23 00:44:00,625 | DEBUG | pilot.control.data | copytool_out | will not set job_aborted yet [2021-07-22 20:44:48] 2021-07-23 00:44:00,625 | DEBUG | pilot.control.data | copytool_out | [data] copytool_out thread has finished [2021-07-22 20:44:48] 2021-07-23 00:44:00,681 | DEBUG | pilot.control.payload | execute_payloads | will not set job_aborted yet [2021-07-22 20:44:48] 2021-07-23 00:44:00,681 | INFO | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished [2021-07-22 20:44:48] 2021-07-23 00:44:00,684 | DEBUG | pilot.control.data | copytool_in | will not set job_aborted yet [2021-07-22 20:44:48] 2021-07-23 00:44:00,685 | DEBUG | pilot.control.data | copytool_in | [data] copytool_in thread has finished [2021-07-22 20:44:48] 2021-07-23 00:44:00,693 | DEBUG | pilot.control.payload | validate_post | will not set job_aborted yet [2021-07-22 20:44:48] 2021-07-23 00:44:00,693 | INFO | pilot.control.payload | validate_post | [payload] validate_post thread has finished [2021-07-22 20:44:48] 2021-07-23 00:44:00,817 | DEBUG | pilot.control.job | validate | will not set job_aborted yet [2021-07-22 20:44:48] 2021-07-23 00:44:00,817 | DEBUG | pilot.control.job | validate | [job] validate thread has finished [2021-07-22 20:44:48] 2021-07-23 00:44:02,129 | WARNING | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration [2021-07-22 20:44:48] 2021-07-23 00:44:02,129 | DEBUG | pilot.control.job | queue_monitor | will not set job_aborted yet [2021-07-22 20:44:48] 2021-07-23 00:44:02,129 | DEBUG | pilot.control.job | queue_monitor | [job] queue monitor thread has finished [2021-07-22 20:44:48] 2021-07-23 00:44:02,858 | DEBUG | pilot.control.data | queue_monitoring | will not set job_aborted yet [2021-07-22 20:44:48] 2021-07-23 00:44:02,858 | DEBUG | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished [2021-07-22 20:44:48] 2021-07-23 00:44:45,749 | WARNING | pilot.control.job | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 73 s) [2021-07-22 20:44:48] 2021-07-23 00:44:45,750 | DEBUG | pilot.util.processes | threads_aborted | aborting since the last relevant thread is about to finish [2021-07-22 20:44:48] 2021-07-23 00:44:45,750 | DEBUG | pilot.control.job | job_monitor | will proceed to set job_aborted [2021-07-22 20:44:48] 2021-07-23 00:44:45,750 | DEBUG | pilot.control.job | job_monitor | [job] job monitor thread has finished [2021-07-22 20:44:48] 2021-07-23 00:44:46,596 | INFO | pilot.workflow.generic | run | end of generic workflow (traces error code: 0) [2021-07-22 20:44:48] 2021-07-23 00:44:46,597 | INFO | root | wrap_up | traces error code: 0 [2021-07-22 20:44:48] 2021-07-23 00:44:46,598 | INFO | root | wrap_up | pilot has finished [2021-07-22 20:44:48] 2021-07-23 00:44:46,894 [wrapper] ==== pilot stdout END ==== [2021-07-22 20:44:48] 2021-07-23 00:44:46,928 [wrapper] ==== wrapper stdout RESUME ==== [2021-07-22 20:44:48] 2021-07-23 00:44:46,957 [wrapper] Pilot exit status: 0 [2021-07-22 20:44:48] 2021-07-23 00:44:47,164 [wrapper] pandaids: 5128259309 [2021-07-22 20:44:48] 2021-07-23 00:44:47,230 [wrapper] apfmon messages muted [2021-07-22 20:44:48] 2021-07-23 00:44:47,267 [wrapper] Test setup, not cleaning [2021-07-22 20:44:48] 2021-07-23 00:44:47,304 [wrapper] ==== wrapper stdout END ==== [2021-07-22 20:44:48] 2021-07-23 00:44:47,340 [wrapper] ==== wrapper stderr END ==== [2021-07-22 20:44:48] 2021-07-23 00:44:47,411 [wrapper] wrapperexiting ec=0, duration=3836 [2021-07-22 20:44:48] 2021-07-23 00:44:47,447 [wrapper] apfmon messages muted [2021-07-22 20:44:48] *** Error codes and diagnostics *** [2021-07-22 20:44:48] "exeErrorCode": 0, [2021-07-22 20:44:48] "exeErrorDiag": "", [2021-07-22 20:44:48] "pilotErrorCode": 0, [2021-07-22 20:44:48] "pilotErrorDiag": "", [2021-07-22 20:44:48] *** Listing of results directory *** [2021-07-22 20:44:48] total 45644 [2021-07-22 20:44:48] -rw-r--r-- 1 boinc boinc 340725 Jul 22 19:27 pilot2.tar.gz [2021-07-22 20:44:48] -rwx------ 1 boinc boinc 20589 Jul 22 19:35 runpilot2-wrapper.sh [2021-07-22 20:44:48] -rw-r--r-- 1 boinc boinc 3214 Jul 22 19:35 queuedata.json [2021-07-22 20:44:48] -rw-r--r-- 1 boinc boinc 107 Jul 22 19:40 wrapper_26015_x86_64-pc-linux-gnu [2021-07-22 20:44:48] -rwxr-xr-x 1 boinc boinc 6966 Jul 22 19:40 run_atlas [2021-07-22 20:44:48] -rw-r--r-- 1 boinc boinc 112 Jul 22 19:40 job.xml [2021-07-22 20:44:48] drwxrwx--x 2 boinc boinc 4096 Jul 22 19:40 shared [2021-07-22 20:44:48] -rw-r--r-- 1 boinc boinc 6188 Jul 22 19:40 init_data.xml [2021-07-22 20:44:48] -rw-r--r-- 1 boinc boinc 0 Jul 22 19:40 boinc_lockfile [2021-07-22 20:44:48] -rw-r--r-- 1 boinc boinc 16583 Jul 22 19:40 start_atlas.sh [2021-07-22 20:44:48] -rw-r--r-- 1 boinc boinc 350445 Jul 22 19:40 input.tar.gz [2021-07-22 20:44:48] -rw-r--r-- 1 boinc boinc 38705932 Jul 22 19:40 EVNT.04972714._000036.pool.root.1 [2021-07-22 20:44:48] -rw-r--r-- 1 boinc boinc 2580 Jul 22 19:40 pandaJob.out [2021-07-22 20:44:48] -rw------- 1 boinc boinc 1068997 Jul 22 19:42 agis_schedconf.cvmfs.json [2021-07-22 20:44:48] -rw------- 1 boinc boinc 1961522 Jul 22 19:42 cric_ddmendpoints.json [2021-07-22 20:44:48] drwx------ 4 boinc boinc 4096 Jul 22 19:42 pilot2 [2021-07-22 20:44:48] -rw------- 1 boinc boinc 1441786 Jul 22 20:41 output.1.bf61cd60-7a71-4b0b-80c2-7dffe842c919_58309.pool.root [2021-07-22 20:44:48] -rw-r--r-- 1 boinc boinc 535 Jul 22 20:42 boinc_task_state.xml [2021-07-22 20:44:48] -rw------- 1 boinc boinc 1017 Jul 22 20:43 memory_monitor_summary.json [2021-07-22 20:44:48] -rw------- 1 boinc boinc 198414 Jul 22 20:43 bf61cd60-7a71-4b0b-80c2-7dffe842c919_58309.1.job.log.tgz [2021-07-22 20:44:48] -rw------- 1 boinc boinc 7823 Jul 22 20:43 heartbeat.json [2021-07-22 20:44:48] -rw-r--r-- 1 boinc boinc 26 Jul 22 20:44 wrapper_checkpoint.txt [2021-07-22 20:44:48] -rw-r--r-- 1 boinc boinc 8192 Jul 22 20:44 boinc_mmap_file [2021-07-22 20:44:48] -rw------- 1 boinc boinc 7367 Jul 22 20:44 pilotlog.txt [2021-07-22 20:44:48] -rw------- 1 boinc boinc 412037 Jul 22 20:44 bf61cd60-7a71-4b0b-80c2-7dffe842c919_58309.1.job.log [2021-07-22 20:44:48] -rw------- 1 boinc boinc 536 Jul 22 20:44 output.list [2021-07-22 20:44:48] -rw-r--r-- 1 boinc boinc 748 Jul 22 20:44 runtime_log [2021-07-22 20:44:48] -rw------- 1 boinc boinc 2068480 Jul 22 20:44 result.tar.gz [2021-07-22 20:44:48] -rw-r--r-- 1 boinc boinc 9441 Jul 22 20:44 runtime_log.err [2021-07-22 20:44:48] -rw------- 1 boinc boinc 564 Jul 22 20:44 bcXKDmIPxQzn7Olcko1bjSoqABFKDmABFKDmumdXDmaGGKDm4SVjIm.diag [2021-07-22 20:44:48] -rw-r--r-- 1 boinc boinc 29605 Jul 22 20:44 stderr.txt [2021-07-22 20:44:48] HITS file was successfully produced: [2021-07-22 20:44:48] -rw------- 1 boinc boinc 1441786 Jul 22 20:41 shared/HITS.pool.root.1 [2021-07-22 20:44:48] *** Contents of shared directory: *** [2021-07-22 20:44:48] total 41592 [2021-07-22 20:44:48] -rw-r--r-- 1 boinc boinc 38705932 Jul 22 19:40 ATLAS.root_0 [2021-07-22 20:44:48] -rw-r--r-- 1 boinc boinc 16583 Jul 22 19:40 start_atlas.sh [2021-07-22 20:44:48] -rw-r--r-- 1 boinc boinc 350445 Jul 22 19:40 input.tar.gz [2021-07-22 20:44:48] -rw------- 1 boinc boinc 1441786 Jul 22 20:41 HITS.pool.root.1 [2021-07-22 20:44:48] -rw------- 1 boinc boinc 2068480 Jul 22 20:44 result.tar.gz 20:44:50 (85443): run_atlas exited; CPU time 1290.458620 20:44:50 (85443): called boinc_finish(0) </stderr_txt> ]]>
©2024 CERN