Name | 8lRLDmjy2Qzn7Olcko1bjSoqABFKDmABFKDmumdXDm1GGKDmc7515m_0 |
Workunit | 2108994 |
Created | 23 Jul 2021, 5:32:41 UTC |
Sent | 23 Jul 2021, 5:44:02 UTC |
Report deadline | 30 Jul 2021, 5:44:02 UTC |
Received | 23 Jul 2021, 6:49:16 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 4357 |
Run time | 1 hours 4 min 27 sec |
CPU time | 37 min 34 sec |
Validate state | Valid |
Credit | 15.49 |
Device peak FLOPS | 3.04 GFLOPS |
Application version | ATLAS Simulation v1.04 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.46 GB |
Peak swap size | 33.91 GB |
Peak disk usage | 80.74 MB |
<core_client_version>7.9.3</core_client_version> <![CDATA[ <stderr_txt> 01:44:26 (139414): wrapper (7.7.26015): starting 01:44:26 (139414): wrapper: running run_atlas (--nthreads 1) [2021-07-23 01:44:26] Arguments: --nthreads 1 [2021-07-23 01:44:26] Threads: 1 [2021-07-23 01:44:26] Checking for CVMFS [2021-07-23 01:44:26] Probing /cvmfs/atlas.cern.ch... OK [2021-07-23 01:44:27] Probing /cvmfs/atlas-condb.cern.ch... OK [2021-07-23 01:44:27] Running cvmfs_config stat atlas.cern.ch [2021-07-23 01:44:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2021-07-23 01:44:28] 2.9.0.0 98843 24 53936 88865 3 110 4083501 4194305 1875 130560 0 164434 99.999 605 1046 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 0 [2021-07-23 01:44:28] CVMFS is ok [2021-07-23 01:44:28] Efficiency of ATLAS tasks can be improved by the following measure(s): [2021-07-23 01:44:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io. [2021-07-23 01:44:28] Small home clusters do not require a local http proxy but it is suggested if [2021-07-23 01:44:28] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks. [2021-07-23 01:44:28] Further information can be found at the LHC@home message board. [2021-07-23 01:44:28] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2021-07-23 01:44:28] Checking for singularity binary... [2021-07-23 01:44:28] Using singularity found in PATH at /usr/local/bin/singularity [2021-07-23 01:44:28] Running /usr/local/bin/singularity --version [2021-07-23 01:44:28] singularity version 3.7.2+10-ga969f0f8c [2021-07-23 01:44:28] Checking singularity works with /usr/local/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2021-07-23 01:44:29] E5-2670 [2021-07-23 01:44:29] Singularity works [2021-07-23 01:44:29] Starting ATLAS job with PandaID=5128467580 [2021-07-23 01:44:29] Running command: /usr/local/bin/singularity exec --pwd /var/lib/boinc-client/slots/36 -B /cvmfs,/var /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2021-07-23 02:49:00] *** The last 200 lines of the pilot log: *** [2021-07-23 02:49:00] "transform": { [2021-07-23 02:49:00] "cpuEfficiency": 0.5944, [2021-07-23 02:49:00] "cpuPWEfficiency": 0.5944, [2021-07-23 02:49:00] "cpuTime": 13, [2021-07-23 02:49:00] "cpuTimeTotal": 2225, [2021-07-23 02:49:00] "externalCpuTime": 54, [2021-07-23 02:49:00] "processedEvents": 2, [2021-07-23 02:49:00] "trfPredata": null, [2021-07-23 02:49:00] "wallTime": 3676 [2021-07-23 02:49:00] } [2021-07-23 02:49:00] } [2021-07-23 02:49:00] } [2021-07-23 02:49:00] 2021-07-23 06:48:29,731 | DEBUG | pilot.user.atlas.common | update_server | no need to update logstash for this job [2021-07-23 02:49:00] 2021-07-23 06:48:29,731 | INFO | pilot.control.job | send_state | pilot will not update the server (heartbeat message will be written to file) [2021-07-23 02:49:00] 2021-07-23 06:48:29,731 | INFO | pilot.control.job | send_state | job 5128467580 has finished - writing final server update [2021-07-23 02:49:00] 2021-07-23 06:48:29,732 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics_string | job definition core count: 1 [2021-07-23 02:49:00] 2021-07-23 06:48:29,732 | INFO | pilot.user.atlas.jobmetrics | get_job_metrics_string | will not add max space = -37089011 B to job metrics [2021-07-23 02:49:00] 2021-07-23 06:48:29,734 | DEBUG | pilot.api.analytics | get_fitted_data | removing tails from data to be fitted [2021-07-23 02:49:00] 2021-07-23 06:48:29,735 | INFO | pilot.api.analytics | get_fitted_data | fitting pss+swap vs Time [2021-07-23 02:49:00] 2021-07-23 06:48:29,739 | INFO | pilot.api.analytics | get_fitted_data | current memory leak: 250.32 B/s (using 54 data points, chi2=525562) [2021-07-23 02:49:00] 2021-07-23 06:48:29,740 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics | job metrics="actualCoreCount=2 nEvents=2 dbTime=270.84 dbData=4274626 leak=250.32 chi2=525562 eventn [2021-07-23 02:49:00] 2021-07-23 06:48:29,740 | INFO | pilot.control.job | get_data_structure | mean actualcorecount: 4.102041 [2021-07-23 02:49:00] 2021-07-23 06:48:29,740 | INFO | pilot.control.job | get_data_structure | total number of processed events: 2 (read) [2021-07-23 02:49:00] 2021-07-23 06:48:29,762 | INFO | pilot.util.container | execute | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2021-07-23 02:49:00] 2021-07-23 06:48:29,859 | INFO | pilot.user.atlas.utilities | get_memory_values | using path: /var/lib/boinc-client/slots/36/PanDA_Pilot-5128467580/memory_monitor_summary.json (trf n [2021-07-23 02:49:00] 2021-07-23 06:48:29,863 | DEBUG | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'Avg': {'nprocs': 5.114, 'nthreads': 6.065, 'pss': 1216117.0, 'rchar': 185667.0, [2021-07-23 02:49:00] 2021-07-23 06:48:29,863 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard info from prmon json [2021-07-23 02:49:00] 2021-07-23 06:48:29,863 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard memory fields from prmon json [2021-07-23 02:49:00] 2021-07-23 06:48:29,863 | INFO | pilot.util.timing | timing_report | .............................. [2021-07-23 02:49:00] 2021-07-23 06:48:29,864 | INFO | pilot.util.timing | timing_report | . Timing measurements: [2021-07-23 02:49:00] 2021-07-23 06:48:29,864 | INFO | pilot.util.timing | timing_report | . get job = 0 s [2021-07-23 02:49:00] 2021-07-23 06:48:29,864 | INFO | pilot.util.timing | timing_report | . initial setup = 3 s [2021-07-23 02:49:00] 2021-07-23 06:48:29,864 | INFO | pilot.util.timing | timing_report | . payload setup = 31 s [2021-07-23 02:49:00] 2021-07-23 06:48:29,864 | INFO | pilot.util.timing | timing_report | . total setup = 34 s [2021-07-23 02:49:00] 2021-07-23 06:48:29,864 | INFO | pilot.util.timing | timing_report | . stage-in = 0 s [2021-07-23 02:49:00] 2021-07-23 06:48:29,865 | INFO | pilot.util.timing | timing_report | . payload execution = 3746 s [2021-07-23 02:49:00] 2021-07-23 06:48:29,865 | INFO | pilot.util.timing | timing_report | . stage-out = 1 s [2021-07-23 02:49:00] 2021-07-23 06:48:29,865 | INFO | pilot.util.timing | timing_report | .............................. [2021-07-23 02:49:00] 2021-07-23 06:48:29,865 | DEBUG | pilot.control.job | send_state | is_harvester_mode(args) : False [2021-07-23 02:49:00] 2021-07-23 06:48:29,867 | DEBUG | pilot.control.job | write_heartbeat_to_file | heartbeat dictionary: {'jobId': '5128467580', 'state': 'finished', 'timestamp': '2021-07-23T02:48:29 [2021-07-23 02:49:00] 2021-07-23 06:48:29,867 | DEBUG | pilot.control.job | write_heartbeat_to_file | wrote heartbeat to file /var/lib/boinc-client/slots/36/heartbeat.json [2021-07-23 02:49:00] 2021-07-23 06:48:29,868 | DEBUG | pilot.control.job | queue_monitor | job 5128467580 was dequeued from the monitored payloads queue [2021-07-23 02:49:00] 2021-07-23 06:48:30,098 | DEBUG | pilot.control.job | queue_monitor | tmp job object deleted [2021-07-23 02:49:00] 2021-07-23 06:48:30,098 | INFO | pilot.control.job | make_job_report | [2021-07-23 02:49:00] 2021-07-23 06:48:30,099 | INFO | pilot.control.job | make_job_report | job summary report [2021-07-23 02:49:00] 2021-07-23 06:48:30,099 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2021-07-23 02:49:00] 2021-07-23 06:48:30,099 | INFO | pilot.control.job | make_job_report | PanDA job id: 5128467580 [2021-07-23 02:49:00] 2021-07-23 06:48:30,099 | INFO | pilot.control.job | make_job_report | task id: NULL [2021-07-23 02:49:00] 2021-07-23 06:48:30,099 | INFO | pilot.control.job | make_job_report | errors: (none) [2021-07-23 02:49:00] 2021-07-23 06:48:30,099 | INFO | pilot.control.job | make_job_report | status: LOG_TRANSFER = DONE [2021-07-23 02:49:00] 2021-07-23 06:48:30,100 | INFO | pilot.control.job | make_job_report | pilot state: finished [2021-07-23 02:49:00] 2021-07-23 06:48:30,100 | INFO | pilot.control.job | make_job_report | transexitcode: 0 [2021-07-23 02:49:00] 2021-07-23 06:48:30,100 | INFO | pilot.control.job | make_job_report | exeerrorcode: 0 [2021-07-23 02:49:00] 2021-07-23 06:48:30,100 | INFO | pilot.control.job | make_job_report | exeerrordiag: [2021-07-23 02:49:00] 2021-07-23 06:48:30,100 | INFO | pilot.control.job | make_job_report | exitcode: 0 [2021-07-23 02:49:00] 2021-07-23 06:48:30,100 | INFO | pilot.control.job | make_job_report | exitmsg: OK [2021-07-23 02:49:00] 2021-07-23 06:48:30,100 | INFO | pilot.control.job | make_job_report | cpuconsumptiontime: 2406 s [2021-07-23 02:49:00] 2021-07-23 06:48:30,101 | INFO | pilot.control.job | make_job_report | nevents: 2 [2021-07-23 02:49:00] 2021-07-23 06:48:30,101 | INFO | pilot.control.job | make_job_report | neventsw: 0 [2021-07-23 02:49:00] 2021-07-23 06:48:30,101 | INFO | pilot.control.job | make_job_report | pid: 147258 [2021-07-23 02:49:00] 2021-07-23 06:48:30,101 | INFO | pilot.control.job | make_job_report | pgrp: 147258 [2021-07-23 02:49:00] 2021-07-23 06:48:30,101 | INFO | pilot.control.job | make_job_report | corecount: 1 [2021-07-23 02:49:00] 2021-07-23 06:48:30,101 | INFO | pilot.control.job | make_job_report | event service: False [2021-07-23 02:49:00] 2021-07-23 06:48:30,101 | INFO | pilot.control.job | make_job_report | sizes: {24752206: 3855522, 24752207: 3855634, 24752208: 3855913, 24752219: 3855799, 24755998: 387815 [2021-07-23 02:49:00] 2021-07-23 06:48:30,102 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2021-07-23 02:49:00] 2021-07-23 06:48:30,102 | INFO | pilot.control.job | make_job_report | [2021-07-23 02:49:00] 2021-07-23 06:48:30,102 | DEBUG | pilot.control.job | has_job_completed | ls -lF /var/lib/boinc-client/slots/36: [2021-07-23 02:49:00] [2021-07-23 02:49:00] 2021-07-23 06:48:30,102 | INFO | pilot.util.container | execute | executing command: ls -lF /var/lib/boinc-client/slots/36 [2021-07-23 02:49:00] 2021-07-23 06:48:30,187 | DEBUG | pilot.control.job | has_job_completed | total 43484 [2021-07-23 02:49:00] -rw------- 1 boinc boinc 392760 Jul 23 02:48 2b888738-46b7-4af7-bd0e-a5e055be830c_12096.1.job.log [2021-07-23 02:49:00] -rw------- 1 boinc boinc 190193 Jul 23 02:48 2b888738-46b7-4af7-bd0e-a5e055be830c_12096.1.job.log.tgz [2021-07-23 02:49:00] -rw------- 1 boinc boinc 130 Jul 23 01:44 8lRLDmjy2Qzn7Olcko1bjSoqABFKDmABFKDmumdXDm1GGKDmc7515m.diag [2021-07-23 02:49:00] -rw------- 1 boinc boinc 1068997 Jul 23 01:45 agis_schedconf.cvmfs.json [2021-07-23 02:49:00] -rw-r--r-- 1 boinc boinc 0 Jul 23 01:44 boinc_lockfile [2021-07-23 02:49:00] -rw-r--r-- 1 boinc boinc 8192 Jul 23 02:48 boinc_mmap_file [2021-07-23 02:49:00] -rw-r--r-- 1 boinc boinc 535 Jul 23 02:47 boinc_task_state.xml [2021-07-23 02:49:00] -rw------- 1 boinc boinc 1961522 Jul 23 01:45 cric_ddmendpoints.json [2021-07-23 02:49:00] -rw-r--r-- 1 boinc boinc 38184411 Jul 23 01:44 EVNT.04972714._000028.pool.root.1 [2021-07-23 02:49:00] -rw------- 1 boinc boinc 6614 Jul 23 02:48 heartbeat.json [2021-07-23 02:49:00] -rw-r--r-- 1 boinc boinc 6188 Jul 23 01:44 init_data.xml [2021-07-23 02:49:00] -rw-r--r-- 1 boinc boinc 352981 Jul 23 01:44 input.tar.gz [2021-07-23 02:49:00] -rw-r--r-- 1 boinc boinc 112 Jul 23 01:44 job.xml [2021-07-23 02:49:00] -rw------- 1 boinc boinc 1015 Jul 23 02:47 memory_monitor_summary.json [2021-07-23 02:49:00] -rw------- 1 boinc boinc 1493272 Jul 23 02:47 output.1.2b888738-46b7-4af7-bd0e-a5e055be830c_12096.pool.root [2021-07-23 02:49:00] -rw------- 1 boinc boinc 536 Jul 23 02:48 output.list [2021-07-23 02:49:00] -rw-r--r-- 1 boinc boinc 2599 Jul 23 01:44 pandaJob.out [2021-07-23 02:49:00] drwxrwx--- 2 boinc boinc 4096 Jul 23 02:48 PanDA_Pilot-5128467580/ [2021-07-23 02:49:00] drwx------ 4 boinc boinc 4096 Jul 23 01:45 pilot2/ [2021-07-23 02:49:00] -rw-r--r-- 1 boinc boinc 343045 Jul 21 09:05 pilot2.tar.gz [2021-07-23 02:49:00] -rw------- 1 boinc boinc 373672 Jul 23 02:48 pilotlog.txt [2021-07-23 02:49:00] -rw-r--r-- 1 boinc boinc 3214 Jul 23 01:30 queuedata.json [2021-07-23 02:49:00] -rwxr-xr-x 1 boinc boinc 6966 Jul 23 01:44 run_atlas* [2021-07-23 02:49:00] -rwx------ 1 boinc boinc 20589 Jul 23 01:32 runpilot2-wrapper.sh* [2021-07-23 02:49:00] -rw-r--r-- 1 boinc boinc 407 Jul 23 01:44 runtime_log [2021-07-23 02:49:00] -rw-r--r-- 1 boinc boinc 5579 Jul 23 01:44 runtime_log.err [2021-07-23 02:49:00] drwxrwx--x 2 boinc boinc 4096 Jul 23 01:44 shared/ [2021-07-23 02:49:00] -rw-r--r-- 1 boinc boinc 16569 Jul 23 01:44 start_atlas.sh [2021-07-23 02:49:00] -rw-r--r-- 1 boinc boinc 2210 Jul 23 01:44 stderr.txt [2021-07-23 02:49:00] -rw-r--r-- 1 boinc boinc 107 Jul 23 01:44 wrapper_26015_x86_64-pc-linux-gnu [2021-07-23 02:49:00] -rw-r--r-- 1 boinc boinc 26 Jul 23 02:48 wrapper_checkpoint.txt [2021-07-23 02:49:00] 2021-07-23 06:48:30,187 | INFO | pilot.util.queuehandling | queue_report | queue jobs has 0 job(s) [2021-07-23 02:49:00] 2021-07-23 06:48:30,188 | INFO | pilot.util.queuehandling | queue_report | queue payloads has 0 job(s) [2021-07-23 02:49:00] 2021-07-23 06:48:30,188 | INFO | pilot.util.queuehandling | queue_report | queue data_in has 0 job(s) [2021-07-23 02:49:00] 2021-07-23 06:48:30,188 | INFO | pilot.util.queuehandling | queue_report | queue data_out has 0 job(s) [2021-07-23 02:49:00] 2021-07-23 06:48:30,188 | INFO | pilot.util.queuehandling | queue_report | queue current_data_in has 0 job(s) [2021-07-23 02:49:00] 2021-07-23 06:48:30,188 | INFO | pilot.util.queuehandling | queue_report | queue validated_jobs has 0 job(s) [2021-07-23 02:49:00] 2021-07-23 06:48:30,189 | INFO | pilot.util.queuehandling | queue_report | queue validated_payloads has 0 job(s) [2021-07-23 02:49:00] 2021-07-23 06:48:30,189 | INFO | pilot.util.queuehandling | queue_report | queue monitored_payloads has 0 job(s) [2021-07-23 02:49:00] 2021-07-23 06:48:30,189 | INFO | pilot.util.queuehandling | queue_report | queue finished_jobs has 0 job(s) [2021-07-23 02:49:00] 2021-07-23 06:48:30,189 | INFO | pilot.util.queuehandling | queue_report | queue finished_payloads has 0 job(s) [2021-07-23 02:49:00] 2021-07-23 06:48:30,189 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_in has 1 job(s) [2021-07-23 02:49:00] 2021-07-23 06:48:30,190 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_out has 0 job(s) [2021-07-23 02:49:00] 2021-07-23 06:48:30,190 | INFO | pilot.util.queuehandling | queue_report | queue failed_jobs has 0 job(s) [2021-07-23 02:49:00] 2021-07-23 06:48:30,190 | INFO | pilot.util.queuehandling | queue_report | queue failed_payloads has 0 job(s) [2021-07-23 02:49:00] 2021-07-23 06:48:30,190 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_in has 0 job(s) [2021-07-23 02:49:00] 2021-07-23 06:48:30,190 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_out has 0 job(s) [2021-07-23 02:49:00] 2021-07-23 06:48:30,190 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobs has 0 job(s) [2021-07-23 02:49:00] 2021-07-23 06:48:30,190 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s) [2021-07-23 02:49:00] 2021-07-23 06:48:30,191 | INFO | pilot.control.job | has_job_completed | job 5128467580 has completed (purged errors) [2021-07-23 02:49:00] 2021-07-23 06:48:30,191 | INFO | pilot.util.processes | cleanup | overall cleanup function is called [2021-07-23 02:49:00] 2021-07-23 06:48:30,197 | DEBUG | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc-client/slots/36/PanDA_Pilot-5128467580 [2021-07-23 02:49:00] 2021-07-23 06:48:31,200 | INFO | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [147258] [2021-07-23 02:49:00] 2021-07-23 06:48:31,200 | INFO | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 147258 [2021-07-23 02:49:00] 2021-07-23 06:48:31,200 | INFO | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes [2021-07-23 02:49:00] 2021-07-23 06:48:32,204 | INFO | pilot.util.processes | cleanup | collected zombie processes [2021-07-23 02:49:00] 2021-07-23 06:48:32,205 | INFO | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=147258 [2021-07-23 02:49:00] 2021-07-23 06:48:32,414 | INFO | pilot.util.processes | kill_processes | process IDs to be killed: [147258] (in reverse order) [2021-07-23 02:49:00] 2021-07-23 06:48:32,761 | WARNING | pilot.util.processes | kill_processes | found no corresponding commands to process id(s) [2021-07-23 02:49:00] 2021-07-23 06:48:32,763 | INFO | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs [2021-07-23 02:49:00] 2021-07-23 06:48:32,764 | DEBUG | pilot.util.queuehandling | purge_queue | queue purged [2021-07-23 02:49:00] 2021-07-23 06:48:32,765 | INFO | pilot.control.job | retrieve | ready for new job [2021-07-23 02:49:00] 2021-07-23 06:48:32,765 | INFO | root | retrieve | pilot has finished for previous job - re-establishing logging [2021-07-23 02:49:00] 2021-07-23 06:48:32,773 | INFO | pilot.util.auxiliary | pilot_version_banner | ***************************************** [2021-07-23 02:49:00] 2021-07-23 06:48:32,774 | INFO | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 2.12.3 (13) *** [2021-07-23 02:49:00] 2021-07-23 06:48:32,775 | INFO | pilot.util.auxiliary | pilot_version_banner | ***************************************** [2021-07-23 02:49:00] 2021-07-23 06:48:32,775 | INFO | pilot.util.auxiliary | pilot_version_banner | [2021-07-23 02:49:00] 2021-07-23 06:48:32,804 | INFO | pilot.util.auxiliary | display_architecture_info | architecture information: [2021-07-23 02:49:00] 2021-07-23 06:48:34,146 | INFO | pilot.util.auxiliary | display_architecture_info | [2021-07-23 02:49:00] LSB Version: :core-4.1-amd64:core-4.1-noarch [2021-07-23 02:49:00] Distributor ID: CentOS [2021-07-23 02:49:00] Description: CentOS Linux release 7.8.2003 (Core) [2021-07-23 02:49:00] Release: 7.8.2003 [2021-07-23 02:49:00] Codename: Core [2021-07-23 02:49:00] 2021-07-23 06:48:34,149 | INFO | pilot.util.auxiliary | pilot_version_banner | ***************************************** [2021-07-23 02:49:00] 2021-07-23 06:48:34,652 | DEBUG | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc-client/slots/36 [2021-07-23 02:49:00] 2021-07-23 06:48:34,891 | INFO | pilot.util.monitoring | check_local_space | sufficient remaining disk space (57028902912 B) [2021-07-23 02:49:00] 2021-07-23 06:48:34,893 | WARNING | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job [2021-07-23 02:49:00] 2021-07-23 06:48:34,895 | DEBUG | pilot.control.job | retrieve | will not set job_aborted yet [2021-07-23 02:49:00] 2021-07-23 06:48:34,896 | DEBUG | pilot.control.job | retrieve | [job] retrieve thread has finished [2021-07-23 02:49:00] 2021-07-23 06:48:34,899 | WARNING | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration [2021-07-23 02:49:00] 2021-07-23 06:48:34,945 | DEBUG | pilot.control.job | validate | will not set job_aborted yet [2021-07-23 02:49:00] 2021-07-23 06:48:34,947 | DEBUG | pilot.control.job | validate | [job] validate thread has finished [2021-07-23 02:49:00] 2021-07-23 06:48:35,035 | INFO | pilot.control.monitor | control | [monitor] control thread has ended [2021-07-23 02:49:00] 2021-07-23 06:48:35,091 | DEBUG | pilot.control.job | create_data_payload | will not set job_aborted yet [2021-07-23 02:49:00] 2021-07-23 06:48:35,092 | DEBUG | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished [2021-07-23 02:49:00] 2021-07-23 06:48:35,125 | WARNING | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration [2021-07-23 02:49:00] 2021-07-23 06:48:35,127 | DEBUG | pilot.control.job | queue_monitor | will not set job_aborted yet [2021-07-23 02:49:00] 2021-07-23 06:48:35,127 | DEBUG | pilot.control.job | queue_monitor | [job] queue monitor thread has finished [2021-07-23 02:49:00] 2021-07-23 06:48:35,393 | DEBUG | pilot.control.data | control | data control ending since graceful_stop has been set [2021-07-23 02:49:00] 2021-07-23 06:48:35,394 | DEBUG | pilot.control.data | control | will not set job_aborted yet [2021-07-23 02:49:00] 2021-07-23 06:48:35,395 | DEBUG | pilot.control.data | control | [data] control thread has finished [2021-07-23 02:49:00] 2021-07-23 06:48:35,505 | DEBUG | pilot.control.job | control | job control ending since graceful_stop has been set [2021-07-23 02:49:00] 2021-07-23 06:48:35,507 | DEBUG | pilot.control.job | control | will not set job_aborted yet [2021-07-23 02:49:00] 2021-07-23 06:48:35,508 | DEBUG | pilot.control.job | control | [job] control thread has finished [2021-07-23 02:49:00] 2021-07-23 06:48:35,592 | DEBUG | pilot.control.payload | control | payload control ending since graceful_stop has been set [2021-07-23 02:49:00] 2021-07-23 06:48:35,593 | DEBUG | pilot.control.payload | control | will not set job_aborted yet [2021-07-23 02:49:00] 2021-07-23 06:48:35,593 | DEBUG | pilot.control.payload | control | [payload] control thread has finished [2021-07-23 02:49:00] 2021-07-23 06:48:35,705 | DEBUG | pilot.control.data | copytool_in | will not set job_aborted yet [2021-07-23 02:49:00] 2021-07-23 06:48:35,706 | DEBUG | pilot.control.data | copytool_in | [data] copytool_in thread has finished [2021-07-23 02:49:00] 2021-07-23 06:48:35,856 | DEBUG | pilot.control.payload | validate_pre | will not set job_aborted yet [2021-07-23 02:49:00] 2021-07-23 06:48:35,857 | INFO | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished [2021-07-23 02:49:00] 2021-07-23 06:48:35,876 | WARNING | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration [2021-07-23 02:49:00] 2021-07-23 06:48:36,160 | DEBUG | pilot.control.payload | validate_post | will not set job_aborted yet [2021-07-23 02:49:00] 2021-07-23 06:48:36,161 | INFO | pilot.control.payload | validate_post | [payload] validate_post thread has finished [2021-07-23 02:49:00] 2021-07-23 06:48:36,345 | DEBUG | pilot.control.payload | execute_payloads | will not set job_aborted yet [2021-07-23 02:49:00] 2021-07-23 06:48:36,345 | INFO | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished [2021-07-23 02:49:00] 2021-07-23 06:48:36,459 | DEBUG | pilot.control.payload | failed_post | will not set job_aborted yet [2021-07-23 02:49:00] 2021-07-23 06:48:36,460 | INFO | pilot.control.payload | failed_post | [payload] failed_post thread has finished [2021-07-23 02:49:00] 2021-07-23 06:48:36,877 | DEBUG | pilot.control.data | copytool_out | will not set job_aborted yet [2021-07-23 02:49:00] 2021-07-23 06:48:36,879 | DEBUG | pilot.control.data | copytool_out | [data] copytool_out thread has finished [2021-07-23 02:49:00] 2021-07-23 06:48:37,905 | DEBUG | pilot.control.data | queue_monitoring | will not set job_aborted yet [2021-07-23 02:49:00] 2021-07-23 06:48:37,906 | DEBUG | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished [2021-07-23 02:49:00] 2021-07-23 06:48:56,324 | WARNING | pilot.control.job | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 77 s) [2021-07-23 02:49:00] 2021-07-23 06:48:56,325 | DEBUG | pilot.util.processes | threads_aborted | aborting since the last relevant thread is about to finish [2021-07-23 02:49:00] 2021-07-23 06:48:56,325 | DEBUG | pilot.control.job | job_monitor | will proceed to set job_aborted [2021-07-23 02:49:00] 2021-07-23 06:48:56,325 | DEBUG | pilot.control.job | job_monitor | [job] job monitor thread has finished [2021-07-23 02:49:00] 2021-07-23 06:48:56,493 | INFO | pilot.workflow.generic | run | end of generic workflow (traces error code: 0) [2021-07-23 02:49:00] 2021-07-23 06:48:56,498 | INFO | root | wrap_up | traces error code: 0 [2021-07-23 02:49:00] 2021-07-23 06:48:56,498 | INFO | root | wrap_up | pilot has finished [2021-07-23 02:49:00] 2021-07-23 06:48:56,816 [wrapper] ==== pilot stdout END ==== [2021-07-23 02:49:00] 2021-07-23 06:48:56,951 [wrapper] ==== wrapper stdout RESUME ==== [2021-07-23 02:49:00] 2021-07-23 06:48:57,108 [wrapper] Pilot exit status: 0 [2021-07-23 02:49:00] 2021-07-23 06:48:57,605 [wrapper] pandaids: 5128467580 [2021-07-23 02:49:00] 2021-07-23 06:48:57,838 [wrapper] apfmon messages muted [2021-07-23 02:49:00] 2021-07-23 06:48:58,157 [wrapper] Test setup, not cleaning [2021-07-23 02:49:00] 2021-07-23 06:48:58,413 [wrapper] ==== wrapper stdout END ==== [2021-07-23 02:49:00] 2021-07-23 06:48:58,474 [wrapper] ==== wrapper stderr END ==== [2021-07-23 02:49:00] 2021-07-23 06:48:58,697 [wrapper] wrapperexiting ec=0, duration=3867 [2021-07-23 02:49:00] 2021-07-23 06:48:58,886 [wrapper] apfmon messages muted [2021-07-23 02:49:00] *** Error codes and diagnostics *** [2021-07-23 02:49:00] "exeErrorCode": 0, [2021-07-23 02:49:00] "exeErrorDiag": "", [2021-07-23 02:49:00] "pilotErrorCode": 0, [2021-07-23 02:49:00] "pilotErrorDiag": "", [2021-07-23 02:49:00] *** Listing of results directory *** [2021-07-23 02:49:00] total 45224 [2021-07-23 02:49:00] -rw-r--r-- 1 boinc boinc 343045 Jul 21 09:05 pilot2.tar.gz [2021-07-23 02:49:00] -rw-r--r-- 1 boinc boinc 3214 Jul 23 01:30 queuedata.json [2021-07-23 02:49:00] -rwx------ 1 boinc boinc 20589 Jul 23 01:32 runpilot2-wrapper.sh [2021-07-23 02:49:00] -rw-r--r-- 1 boinc boinc 107 Jul 23 01:44 wrapper_26015_x86_64-pc-linux-gnu [2021-07-23 02:49:00] -rwxr-xr-x 1 boinc boinc 6966 Jul 23 01:44 run_atlas [2021-07-23 02:49:00] -rw-r--r-- 1 boinc boinc 112 Jul 23 01:44 job.xml [2021-07-23 02:49:00] drwxrwx--x 2 boinc boinc 4096 Jul 23 01:44 shared [2021-07-23 02:49:00] -rw-r--r-- 1 boinc boinc 6188 Jul 23 01:44 init_data.xml [2021-07-23 02:49:00] -rw-r--r-- 1 boinc boinc 0 Jul 23 01:44 boinc_lockfile [2021-07-23 02:49:00] -rw-r--r-- 1 boinc boinc 38184411 Jul 23 01:44 EVNT.04972714._000028.pool.root.1 [2021-07-23 02:49:00] -rw-r--r-- 1 boinc boinc 16569 Jul 23 01:44 start_atlas.sh [2021-07-23 02:49:00] -rw-r--r-- 1 boinc boinc 352981 Jul 23 01:44 input.tar.gz [2021-07-23 02:49:00] -rw-r--r-- 1 boinc boinc 2599 Jul 23 01:44 pandaJob.out [2021-07-23 02:49:00] -rw------- 1 boinc boinc 1068997 Jul 23 01:45 agis_schedconf.cvmfs.json [2021-07-23 02:49:00] -rw------- 1 boinc boinc 1961522 Jul 23 01:45 cric_ddmendpoints.json [2021-07-23 02:49:00] drwx------ 4 boinc boinc 4096 Jul 23 01:45 pilot2 [2021-07-23 02:49:00] -rw------- 1 boinc boinc 1493272 Jul 23 02:47 output.1.2b888738-46b7-4af7-bd0e-a5e055be830c_12096.pool.root [2021-07-23 02:49:00] -rw-r--r-- 1 boinc boinc 535 Jul 23 02:47 boinc_task_state.xml [2021-07-23 02:49:00] -rw------- 1 boinc boinc 1015 Jul 23 02:47 memory_monitor_summary.json [2021-07-23 02:49:00] -rw------- 1 boinc boinc 190193 Jul 23 02:48 2b888738-46b7-4af7-bd0e-a5e055be830c_12096.1.job.log.tgz [2021-07-23 02:49:00] -rw------- 1 boinc boinc 6614 Jul 23 02:48 heartbeat.json [2021-07-23 02:49:00] -rw-r--r-- 1 boinc boinc 8192 Jul 23 02:48 boinc_mmap_file [2021-07-23 02:49:00] -rw-r--r-- 1 boinc boinc 26 Jul 23 02:48 wrapper_checkpoint.txt [2021-07-23 02:49:00] -rw------- 1 boinc boinc 7367 Jul 23 02:48 pilotlog.txt [2021-07-23 02:49:00] -rw------- 1 boinc boinc 407439 Jul 23 02:48 2b888738-46b7-4af7-bd0e-a5e055be830c_12096.1.job.log [2021-07-23 02:49:00] -rw------- 1 boinc boinc 536 Jul 23 02:49 output.list [2021-07-23 02:49:00] -rw-r--r-- 1 boinc boinc 748 Jul 23 02:49 runtime_log [2021-07-23 02:49:00] -rw------- 1 boinc boinc 2109440 Jul 23 02:49 result.tar.gz [2021-07-23 02:49:00] -rw-r--r-- 1 boinc boinc 9434 Jul 23 02:49 runtime_log.err [2021-07-23 02:49:00] -rw------- 1 boinc boinc 564 Jul 23 02:49 8lRLDmjy2Qzn7Olcko1bjSoqABFKDmABFKDmumdXDm1GGKDmc7515m.diag [2021-07-23 02:49:00] -rw-r--r-- 1 boinc boinc 29563 Jul 23 02:49 stderr.txt [2021-07-23 02:49:00] HITS file was successfully produced: [2021-07-23 02:49:00] -rw------- 1 boinc boinc 1493272 Jul 23 02:47 shared/HITS.pool.root.1 [2021-07-23 02:49:00] *** Contents of shared directory: *** [2021-07-23 02:49:00] total 41180 [2021-07-23 02:49:00] -rw-r--r-- 1 boinc boinc 38184411 Jul 23 01:44 ATLAS.root_0 [2021-07-23 02:49:00] -rw-r--r-- 1 boinc boinc 16569 Jul 23 01:44 start_atlas.sh [2021-07-23 02:49:00] -rw-r--r-- 1 boinc boinc 352981 Jul 23 01:44 input.tar.gz [2021-07-23 02:49:00] -rw------- 1 boinc boinc 1493272 Jul 23 02:47 HITS.pool.root.1 [2021-07-23 02:49:00] -rw------- 1 boinc boinc 2109440 Jul 23 02:49 result.tar.gz 02:49:02 (139414): run_atlas exited; CPU time 2254.394717 02:49:02 (139414): called boinc_finish(0) </stderr_txt> ]]>
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