Name | e0GNDmS14Qzn7Olcko1bjSoqABFKDmABFKDmumdXDmBHGKDmWfJ9Zm_0 |
Workunit | 2109145 |
Created | 23 Jul 2021, 7:43:41 UTC |
Sent | 23 Jul 2021, 7:47:19 UTC |
Report deadline | 30 Jul 2021, 7:47:19 UTC |
Received | 23 Jul 2021, 8:48:57 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 4357 |
Run time | 1 hours 0 min 35 sec |
CPU time | 28 min 15 sec |
Validate state | Valid |
Credit | 14.68 |
Device peak FLOPS | 3.04 GFLOPS |
Application version | ATLAS Simulation v1.04 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.44 GB |
Peak swap size | 34.18 GB |
Peak disk usage | 79.86 MB |
<core_client_version>7.9.3</core_client_version> <![CDATA[ <stderr_txt> 03:48:01 (66779): wrapper (7.7.26015): starting 03:48:01 (66779): wrapper: running run_atlas (--nthreads 1) [2021-07-23 03:48:01] Arguments: --nthreads 1 [2021-07-23 03:48:01] Threads: 1 [2021-07-23 03:48:01] Checking for CVMFS [2021-07-23 03:48:04] Probing /cvmfs/atlas.cern.ch... OK [2021-07-23 03:48:05] Probing /cvmfs/atlas-condb.cern.ch... OK [2021-07-23 03:48:05] Running cvmfs_config stat atlas.cern.ch [2021-07-23 03:48:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2021-07-23 03:48:06] 2.9.0.0 67080 0 24656 88870 3 1 4143838 4194305 0 130560 0 0 100.000 0 0 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 0 [2021-07-23 03:48:06] CVMFS is ok [2021-07-23 03:48:06] Efficiency of ATLAS tasks can be improved by the following measure(s): [2021-07-23 03:48:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io. [2021-07-23 03:48:06] Small home clusters do not require a local http proxy but it is suggested if [2021-07-23 03:48:06] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks. [2021-07-23 03:48:06] Further information can be found at the LHC@home message board. [2021-07-23 03:48:06] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2021-07-23 03:48:06] Checking for singularity binary... [2021-07-23 03:48:06] Using singularity found in PATH at /usr/local/bin/singularity [2021-07-23 03:48:06] Running /usr/local/bin/singularity --version [2021-07-23 03:48:06] singularity version 3.7.2+10-ga969f0f8c [2021-07-23 03:48:06] Checking singularity works with /usr/local/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2021-07-23 03:48:07] E5-2670 [2021-07-23 03:48:07] Singularity works [2021-07-23 03:48:07] Starting ATLAS job with PandaID=5128602561 [2021-07-23 03:48:07] Running command: /usr/local/bin/singularity exec --pwd /var/lib/boinc-client/slots/36 -B /cvmfs,/var /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2021-07-23 04:48:32] *** The last 200 lines of the pilot log: *** [2021-07-23 04:48:32] "cpuEfficiency": 0.4995, [2021-07-23 04:48:32] "cpuPWEfficiency": 0.4995, [2021-07-23 04:48:32] "cpuTime": 14, [2021-07-23 04:48:32] "cpuTimeTotal": 1656, [2021-07-23 04:48:32] "externalCpuTime": 49, [2021-07-23 04:48:32] "processedEvents": 2, [2021-07-23 04:48:32] "trfPredata": null, [2021-07-23 04:48:32] "wallTime": 3247 [2021-07-23 04:48:32] } [2021-07-23 04:48:32] } [2021-07-23 04:48:32] } [2021-07-23 04:48:32] 2021-07-23 08:47:26,374 | DEBUG | pilot.user.atlas.common | update_server | no need to update logstash for this job [2021-07-23 04:48:32] 2021-07-23 08:47:26,375 | INFO | pilot.control.job | send_state | pilot will not update the server (heartbeat message will be written to file) [2021-07-23 04:48:32] 2021-07-23 08:47:26,375 | INFO | pilot.control.job | send_state | job 5128602561 has finished - writing final server update [2021-07-23 04:48:32] 2021-07-23 08:47:26,376 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics_string | job definition core count: 1 [2021-07-23 04:48:32] 2021-07-23 08:47:26,378 | INFO | pilot.user.atlas.jobmetrics | get_job_metrics_string | will not add max space = -36332868 B to job metrics [2021-07-23 04:48:32] 2021-07-23 08:47:26,380 | DEBUG | pilot.api.analytics | get_fitted_data | removing tails from data to be fitted [2021-07-23 04:48:32] 2021-07-23 08:47:26,381 | INFO | pilot.api.analytics | get_fitted_data | fitting pss+swap vs Time [2021-07-23 04:48:32] 2021-07-23 08:47:26,382 | INFO | pilot.api.analytics | get_fitted_data | current memory leak: 365.32 B/s (using 47 data points, chi2=554551) [2021-07-23 04:48:32] 2021-07-23 08:47:26,383 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics | job metrics="actualCoreCount=5 nEvents=2 dbTime=268.02 dbData=4274626 leak=365.32 chi2=554551 eventn [2021-07-23 04:48:32] 2021-07-23 08:47:26,384 | INFO | pilot.control.job | get_data_structure | mean actualcorecount: 4.500000 [2021-07-23 04:48:32] 2021-07-23 08:47:26,384 | INFO | pilot.control.job | get_data_structure | total number of processed events: 2 (read) [2021-07-23 04:48:32] 2021-07-23 08:47:26,410 | INFO | pilot.util.container | execute | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2021-07-23 04:48:32] 2021-07-23 08:47:26,515 | INFO | pilot.user.atlas.utilities | get_memory_values | using path: /var/lib/boinc-client/slots/36/PanDA_Pilot-5128602561/memory_monitor_summary.json (trf n [2021-07-23 04:48:32] 2021-07-23 08:47:26,519 | DEBUG | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'Avg': {'nprocs': 5.129, 'nthreads': 6.074, 'pss': 1141890.0, 'rchar': 202634.0, [2021-07-23 04:48:32] 2021-07-23 08:47:26,519 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard info from prmon json [2021-07-23 04:48:32] 2021-07-23 08:47:26,519 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard memory fields from prmon json [2021-07-23 04:48:32] 2021-07-23 08:47:26,520 | INFO | pilot.util.timing | timing_report | .............................. [2021-07-23 04:48:32] 2021-07-23 08:47:26,520 | INFO | pilot.util.timing | timing_report | . Timing measurements: [2021-07-23 04:48:32] 2021-07-23 08:47:26,520 | INFO | pilot.util.timing | timing_report | . get job = 0 s [2021-07-23 04:48:32] 2021-07-23 08:47:26,520 | INFO | pilot.util.timing | timing_report | . initial setup = 1 s [2021-07-23 04:48:32] 2021-07-23 08:47:26,520 | INFO | pilot.util.timing | timing_report | . payload setup = 54 s [2021-07-23 04:48:32] 2021-07-23 08:47:26,521 | INFO | pilot.util.timing | timing_report | . total setup = 55 s [2021-07-23 04:48:32] 2021-07-23 08:47:26,521 | INFO | pilot.util.timing | timing_report | . stage-in = 2 s [2021-07-23 04:48:32] 2021-07-23 08:47:26,521 | INFO | pilot.util.timing | timing_report | . payload execution = 3383 s [2021-07-23 04:48:32] 2021-07-23 08:47:26,521 | INFO | pilot.util.timing | timing_report | . stage-out = 1 s [2021-07-23 04:48:32] 2021-07-23 08:47:26,521 | INFO | pilot.util.timing | timing_report | .............................. [2021-07-23 04:48:32] 2021-07-23 08:47:26,522 | DEBUG | pilot.control.job | send_state | is_harvester_mode(args) : False [2021-07-23 04:48:32] 2021-07-23 08:47:26,523 | DEBUG | pilot.control.job | write_heartbeat_to_file | heartbeat dictionary: {'jobId': '5128602561', 'state': 'finished', 'timestamp': '2021-07-23T04:47:26 [2021-07-23 04:48:32] 2021-07-23 08:47:26,525 | DEBUG | pilot.control.job | write_heartbeat_to_file | wrote heartbeat to file /var/lib/boinc-client/slots/36/heartbeat.json [2021-07-23 04:48:32] 2021-07-23 08:47:26,525 | DEBUG | pilot.control.job | queue_monitor | job 5128602561 was dequeued from the monitored payloads queue [2021-07-23 04:48:32] 2021-07-23 08:47:26,766 | DEBUG | pilot.control.job | queue_monitor | tmp job object deleted [2021-07-23 04:48:32] 2021-07-23 08:47:26,767 | INFO | pilot.control.job | make_job_report | [2021-07-23 04:48:32] 2021-07-23 08:47:26,767 | INFO | pilot.control.job | make_job_report | job summary report [2021-07-23 04:48:32] 2021-07-23 08:47:26,768 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2021-07-23 04:48:32] 2021-07-23 08:47:26,768 | INFO | pilot.control.job | make_job_report | PanDA job id: 5128602561 [2021-07-23 04:48:32] 2021-07-23 08:47:26,768 | INFO | pilot.control.job | make_job_report | task id: NULL [2021-07-23 04:48:32] 2021-07-23 08:47:26,768 | INFO | pilot.control.job | make_job_report | errors: (none) [2021-07-23 04:48:32] 2021-07-23 08:47:26,768 | INFO | pilot.control.job | make_job_report | status: LOG_TRANSFER = DONE [2021-07-23 04:48:32] 2021-07-23 08:47:26,769 | INFO | pilot.control.job | make_job_report | pilot state: finished [2021-07-23 04:48:32] 2021-07-23 08:47:26,769 | INFO | pilot.control.job | make_job_report | transexitcode: 0 [2021-07-23 04:48:32] 2021-07-23 08:47:26,769 | INFO | pilot.control.job | make_job_report | exeerrorcode: 0 [2021-07-23 04:48:32] 2021-07-23 08:47:26,769 | INFO | pilot.control.job | make_job_report | exeerrordiag: [2021-07-23 04:48:32] 2021-07-23 08:47:26,769 | INFO | pilot.control.job | make_job_report | exitcode: 0 [2021-07-23 04:48:32] 2021-07-23 08:47:26,769 | INFO | pilot.control.job | make_job_report | exitmsg: OK [2021-07-23 04:48:32] 2021-07-23 08:47:26,770 | INFO | pilot.control.job | make_job_report | cpuconsumptiontime: 1822 s [2021-07-23 04:48:32] 2021-07-23 08:47:26,770 | INFO | pilot.control.job | make_job_report | nevents: 2 [2021-07-23 04:48:32] 2021-07-23 08:47:26,770 | INFO | pilot.control.job | make_job_report | neventsw: 0 [2021-07-23 04:48:32] 2021-07-23 08:47:26,770 | INFO | pilot.control.job | make_job_report | pid: 93184 [2021-07-23 04:48:32] 2021-07-23 08:47:26,770 | INFO | pilot.control.job | make_job_report | pgrp: 93184 [2021-07-23 04:48:32] 2021-07-23 08:47:26,770 | INFO | pilot.control.job | make_job_report | corecount: 1 [2021-07-23 04:48:32] 2021-07-23 08:47:26,770 | INFO | pilot.control.job | make_job_report | event service: False [2021-07-23 04:48:32] 2021-07-23 08:47:26,771 | INFO | pilot.control.job | make_job_report | sizes: {24759680: 3854243, 24759681: 3855520, 24759682: 3855576, 24759683: 3855633, 24759685: 385579 [2021-07-23 04:48:32] 2021-07-23 08:47:26,771 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2021-07-23 04:48:32] 2021-07-23 08:47:26,771 | INFO | pilot.control.job | make_job_report | [2021-07-23 04:48:32] 2021-07-23 08:47:26,771 | DEBUG | pilot.control.job | has_job_completed | ls -lF /var/lib/boinc-client/slots/36: [2021-07-23 04:48:32] [2021-07-23 04:48:32] 2021-07-23 08:47:26,771 | INFO | pilot.util.container | execute | executing command: ls -lF /var/lib/boinc-client/slots/36 [2021-07-23 04:48:32] 2021-07-23 08:47:26,838 | DEBUG | pilot.control.job | has_job_completed | total 42860 [2021-07-23 04:48:32] -rw------- 1 boinc boinc 363053 Jul 23 04:47 06a14c7f-9e45-49ab-b2ea-34dccf0f08d8_30608.1.job.log [2021-07-23 04:48:32] -rw------- 1 boinc boinc 191026 Jul 23 04:47 06a14c7f-9e45-49ab-b2ea-34dccf0f08d8_30608.1.job.log.tgz [2021-07-23 04:48:32] -rw------- 1 boinc boinc 1069000 Jul 23 03:49 agis_schedconf.cvmfs.json [2021-07-23 04:48:32] -rw-r--r-- 1 boinc boinc 0 Jul 23 03:48 boinc_lockfile [2021-07-23 04:48:32] -rw-r--r-- 1 boinc boinc 8192 Jul 23 04:47 boinc_mmap_file [2021-07-23 04:48:32] -rw-r--r-- 1 boinc boinc 535 Jul 23 04:46 boinc_task_state.xml [2021-07-23 04:48:32] -rw------- 1 boinc boinc 1961522 Jul 23 03:49 cric_ddmendpoints.json [2021-07-23 04:48:32] -rw------- 1 boinc boinc 130 Jul 23 03:48 e0GNDmS14Qzn7Olcko1bjSoqABFKDmABFKDmumdXDmBHGKDmWfJ9Zm.diag [2021-07-23 04:48:32] -rw-r--r-- 1 boinc boinc 37727106 Jul 23 03:48 EVNT.04972714._000037.pool.root.1 [2021-07-23 04:48:32] -rw------- 1 boinc boinc 6602 Jul 23 04:47 heartbeat.json [2021-07-23 04:48:32] -rw-r--r-- 1 boinc boinc 6188 Jul 23 03:48 init_data.xml [2021-07-23 04:48:32] -rw-r--r-- 1 boinc boinc 350486 Jul 23 03:48 input.tar.gz [2021-07-23 04:48:32] -rw-r--r-- 1 boinc boinc 112 Jul 23 03:48 job.xml [2021-07-23 04:48:32] -rw------- 1 boinc boinc 1015 Jul 23 04:46 memory_monitor_summary.json [2021-07-23 04:48:32] -rw------- 1 boinc boinc 1374658 Jul 23 04:46 output.1.06a14c7f-9e45-49ab-b2ea-34dccf0f08d8_30608.pool.root [2021-07-23 04:48:32] -rw------- 1 boinc boinc 536 Jul 23 04:47 output.list [2021-07-23 04:48:32] -rw-r--r-- 1 boinc boinc 2613 Jul 23 03:48 pandaJob.out [2021-07-23 04:48:32] drwxrwx--- 2 boinc boinc 4096 Jul 23 04:47 PanDA_Pilot-5128602561/ [2021-07-23 04:48:32] drwx------ 4 boinc boinc 4096 Jul 23 03:49 pilot2/ [2021-07-23 04:48:32] -rw-r--r-- 1 boinc boinc 340725 Jul 23 03:25 pilot2.tar.gz [2021-07-23 04:48:32] -rw------- 1 boinc boinc 343790 Jul 23 04:47 pilotlog.txt [2021-07-23 04:48:32] -rw-r--r-- 1 boinc boinc 3214 Jul 23 03:41 queuedata.json [2021-07-23 04:48:32] -rwxr-xr-x 1 boinc boinc 6966 Jul 23 03:48 run_atlas* [2021-07-23 04:48:32] -rwx------ 1 boinc boinc 20589 Jul 23 03:43 runpilot2-wrapper.sh* [2021-07-23 04:48:32] -rw-r--r-- 1 boinc boinc 407 Jul 23 03:48 runtime_log [2021-07-23 04:48:32] -rw-r--r-- 1 boinc boinc 5586 Jul 23 03:48 runtime_log.err [2021-07-23 04:48:32] drwxrwx--x 2 boinc boinc 4096 Jul 23 03:48 shared/ [2021-07-23 04:48:32] -rw-r--r-- 1 boinc boinc 16583 Jul 23 03:48 start_atlas.sh [2021-07-23 04:48:32] -rw-r--r-- 1 boinc boinc 2193 Jul 23 03:48 stderr.txt [2021-07-23 04:48:32] -rw-r--r-- 1 boinc boinc 107 Jul 23 03:48 wrapper_26015_x86_64-pc-linux-gnu [2021-07-23 04:48:32] -rw-r--r-- 1 boinc boinc 26 Jul 23 04:47 wrapper_checkpoint.txt [2021-07-23 04:48:32] 2021-07-23 08:47:26,838 | INFO | pilot.util.queuehandling | queue_report | queue jobs has 0 job(s) [2021-07-23 04:48:32] 2021-07-23 08:47:26,839 | INFO | pilot.util.queuehandling | queue_report | queue payloads has 0 job(s) [2021-07-23 04:48:32] 2021-07-23 08:47:26,839 | INFO | pilot.util.queuehandling | queue_report | queue data_in has 0 job(s) [2021-07-23 04:48:32] 2021-07-23 08:47:26,839 | INFO | pilot.util.queuehandling | queue_report | queue data_out has 0 job(s) [2021-07-23 04:48:32] 2021-07-23 08:47:26,839 | INFO | pilot.util.queuehandling | queue_report | queue current_data_in has 0 job(s) [2021-07-23 04:48:32] 2021-07-23 08:47:26,839 | INFO | pilot.util.queuehandling | queue_report | queue validated_jobs has 0 job(s) [2021-07-23 04:48:32] 2021-07-23 08:47:26,840 | INFO | pilot.util.queuehandling | queue_report | queue validated_payloads has 0 job(s) [2021-07-23 04:48:32] 2021-07-23 08:47:26,840 | INFO | pilot.util.queuehandling | queue_report | queue monitored_payloads has 0 job(s) [2021-07-23 04:48:32] 2021-07-23 08:47:26,840 | INFO | pilot.util.queuehandling | queue_report | queue finished_jobs has 0 job(s) [2021-07-23 04:48:32] 2021-07-23 08:47:26,840 | INFO | pilot.util.queuehandling | queue_report | queue finished_payloads has 0 job(s) [2021-07-23 04:48:32] 2021-07-23 08:47:26,840 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_in has 1 job(s) [2021-07-23 04:48:32] 2021-07-23 08:47:26,840 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_out has 0 job(s) [2021-07-23 04:48:32] 2021-07-23 08:47:26,841 | INFO | pilot.util.queuehandling | queue_report | queue failed_jobs has 0 job(s) [2021-07-23 04:48:32] 2021-07-23 08:47:26,841 | INFO | pilot.util.queuehandling | queue_report | queue failed_payloads has 0 job(s) [2021-07-23 04:48:32] 2021-07-23 08:47:26,841 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_in has 0 job(s) [2021-07-23 04:48:32] 2021-07-23 08:47:26,841 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_out has 0 job(s) [2021-07-23 04:48:32] 2021-07-23 08:47:26,841 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobs has 0 job(s) [2021-07-23 04:48:32] 2021-07-23 08:47:26,841 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s) [2021-07-23 04:48:32] 2021-07-23 08:47:26,842 | INFO | pilot.control.job | has_job_completed | job 5128602561 has completed (purged errors) [2021-07-23 04:48:32] 2021-07-23 08:47:26,842 | INFO | pilot.util.processes | cleanup | overall cleanup function is called [2021-07-23 04:48:32] 2021-07-23 08:47:26,849 | DEBUG | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc-client/slots/36/PanDA_Pilot-5128602561 [2021-07-23 04:48:32] 2021-07-23 08:47:27,348 | WARNING | pilot.control.job | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 75 s) [2021-07-23 04:48:32] 2021-07-23 08:47:27,851 | INFO | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [93184] [2021-07-23 04:48:32] 2021-07-23 08:47:27,852 | INFO | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 93184 [2021-07-23 04:48:32] 2021-07-23 08:47:27,852 | INFO | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes [2021-07-23 04:48:32] 2021-07-23 08:47:28,859 | INFO | pilot.util.processes | cleanup | collected zombie processes [2021-07-23 04:48:32] 2021-07-23 08:47:28,864 | INFO | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=93184 [2021-07-23 04:48:32] 2021-07-23 08:47:29,854 | INFO | pilot.util.processes | kill_processes | process IDs to be killed: [93184] (in reverse order) [2021-07-23 04:48:32] 2021-07-23 08:47:30,296 | WARNING | pilot.util.processes | kill_processes | found no corresponding commands to process id(s) [2021-07-23 04:48:32] 2021-07-23 08:47:30,297 | INFO | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs [2021-07-23 04:48:32] 2021-07-23 08:47:30,298 | DEBUG | pilot.util.queuehandling | purge_queue | queue purged [2021-07-23 04:48:32] 2021-07-23 08:47:30,298 | INFO | pilot.control.job | retrieve | ready for new job [2021-07-23 04:48:32] 2021-07-23 08:47:30,298 | INFO | root | retrieve | pilot has finished for previous job - re-establishing logging [2021-07-23 04:48:32] 2021-07-23 08:47:30,301 | INFO | pilot.util.auxiliary | pilot_version_banner | ***************************************** [2021-07-23 04:48:32] 2021-07-23 08:47:30,302 | INFO | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 2.12.3 (13) *** [2021-07-23 04:48:32] 2021-07-23 08:47:30,302 | INFO | pilot.util.auxiliary | pilot_version_banner | ***************************************** [2021-07-23 04:48:32] 2021-07-23 08:47:30,303 | INFO | pilot.util.auxiliary | pilot_version_banner | [2021-07-23 04:48:32] 2021-07-23 08:47:30,327 | INFO | pilot.util.auxiliary | display_architecture_info | architecture information: [2021-07-23 04:48:32] 2021-07-23 08:47:30,969 | INFO | pilot.util.auxiliary | display_architecture_info | [2021-07-23 04:48:32] LSB Version: :core-4.1-amd64:core-4.1-noarch [2021-07-23 04:48:32] Distributor ID: CentOS [2021-07-23 04:48:32] Description: CentOS Linux release 7.8.2003 (Core) [2021-07-23 04:48:32] Release: 7.8.2003 [2021-07-23 04:48:32] Codename: Core [2021-07-23 04:48:32] 2021-07-23 08:47:30,970 | INFO | pilot.util.auxiliary | pilot_version_banner | ***************************************** [2021-07-23 04:48:32] 2021-07-23 08:47:31,473 | DEBUG | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc-client/slots/36 [2021-07-23 04:48:32] 2021-07-23 08:47:31,557 | INFO | pilot.util.monitoring | check_local_space | sufficient remaining disk space (53166997504 B) [2021-07-23 04:48:32] 2021-07-23 08:47:31,558 | WARNING | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job [2021-07-23 04:48:32] 2021-07-23 08:47:31,559 | DEBUG | pilot.control.job | retrieve | will not set job_aborted yet [2021-07-23 04:48:32] 2021-07-23 08:47:31,559 | DEBUG | pilot.control.job | retrieve | [job] retrieve thread has finished [2021-07-23 04:48:32] 2021-07-23 08:47:31,672 | DEBUG | pilot.control.job | control | job control ending since graceful_stop has been set [2021-07-23 04:48:32] 2021-07-23 08:47:31,677 | DEBUG | pilot.control.job | control | will not set job_aborted yet [2021-07-23 04:48:32] 2021-07-23 08:47:31,678 | DEBUG | pilot.control.job | control | [job] control thread has finished [2021-07-23 04:48:32] 2021-07-23 08:47:31,698 | INFO | pilot.control.monitor | control | [monitor] control thread has ended [2021-07-23 04:48:32] 2021-07-23 08:47:31,797 | WARNING | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration [2021-07-23 04:48:32] 2021-07-23 08:47:31,797 | DEBUG | pilot.control.job | queue_monitor | will not set job_aborted yet [2021-07-23 04:48:32] 2021-07-23 08:47:31,797 | DEBUG | pilot.control.job | queue_monitor | [job] queue monitor thread has finished [2021-07-23 04:48:32] 2021-07-23 08:47:31,830 | WARNING | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration [2021-07-23 04:48:32] 2021-07-23 08:47:32,085 | DEBUG | pilot.control.data | copytool_in | will not set job_aborted yet [2021-07-23 04:48:32] 2021-07-23 08:47:32,086 | DEBUG | pilot.control.data | copytool_in | [data] copytool_in thread has finished [2021-07-23 04:48:32] 2021-07-23 08:47:32,120 | DEBUG | pilot.control.payload | failed_post | will not set job_aborted yet [2021-07-23 04:48:32] 2021-07-23 08:47:32,121 | INFO | pilot.control.payload | failed_post | [payload] failed_post thread has finished [2021-07-23 04:48:32] 2021-07-23 08:47:32,145 | DEBUG | pilot.control.payload | validate_pre | will not set job_aborted yet [2021-07-23 04:48:32] 2021-07-23 08:47:32,145 | INFO | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished [2021-07-23 04:48:32] 2021-07-23 08:47:32,201 | DEBUG | pilot.control.data | control | data control ending since graceful_stop has been set [2021-07-23 04:48:32] 2021-07-23 08:47:32,203 | DEBUG | pilot.control.data | control | will not set job_aborted yet [2021-07-23 04:48:32] 2021-07-23 08:47:32,203 | DEBUG | pilot.control.data | control | [data] control thread has finished [2021-07-23 04:48:32] 2021-07-23 08:47:32,213 | DEBUG | pilot.control.payload | validate_post | will not set job_aborted yet [2021-07-23 04:48:32] 2021-07-23 08:47:32,215 | INFO | pilot.control.payload | validate_post | [payload] validate_post thread has finished [2021-07-23 04:48:32] 2021-07-23 08:47:32,246 | DEBUG | pilot.control.job | validate | will not set job_aborted yet [2021-07-23 04:48:32] 2021-07-23 08:47:32,247 | DEBUG | pilot.control.job | validate | [job] validate thread has finished [2021-07-23 04:48:32] 2021-07-23 08:47:32,515 | DEBUG | pilot.control.payload | control | payload control ending since graceful_stop has been set [2021-07-23 04:48:32] 2021-07-23 08:47:32,516 | DEBUG | pilot.control.payload | control | will not set job_aborted yet [2021-07-23 04:48:32] 2021-07-23 08:47:32,516 | DEBUG | pilot.control.payload | control | [payload] control thread has finished [2021-07-23 04:48:32] 2021-07-23 08:47:32,572 | DEBUG | pilot.control.payload | execute_payloads | will not set job_aborted yet [2021-07-23 04:48:32] 2021-07-23 08:47:32,574 | INFO | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished [2021-07-23 04:48:32] 2021-07-23 08:47:32,838 | DEBUG | pilot.control.data | copytool_out | will not set job_aborted yet [2021-07-23 04:48:32] 2021-07-23 08:47:32,841 | DEBUG | pilot.control.data | copytool_out | [data] copytool_out thread has finished [2021-07-23 04:48:32] 2021-07-23 08:47:32,954 | DEBUG | pilot.control.job | create_data_payload | will not set job_aborted yet [2021-07-23 04:48:32] 2021-07-23 08:47:32,955 | DEBUG | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished [2021-07-23 04:48:32] 2021-07-23 08:47:34,567 | WARNING | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration [2021-07-23 04:48:32] 2021-07-23 08:47:37,571 | DEBUG | pilot.control.data | queue_monitoring | will not set job_aborted yet [2021-07-23 04:48:32] 2021-07-23 08:47:37,571 | DEBUG | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished [2021-07-23 04:48:32] 2021-07-23 08:48:28,955 | WARNING | pilot.control.job | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 136 s) [2021-07-23 04:48:32] 2021-07-23 08:48:28,959 | DEBUG | pilot.util.processes | threads_aborted | aborting since the last relevant thread is about to finish [2021-07-23 04:48:32] 2021-07-23 08:48:28,960 | DEBUG | pilot.control.job | job_monitor | will proceed to set job_aborted [2021-07-23 04:48:32] 2021-07-23 08:48:28,961 | DEBUG | pilot.control.job | job_monitor | [job] job monitor thread has finished [2021-07-23 04:48:32] 2021-07-23 08:48:29,816 | INFO | pilot.workflow.generic | run | end of generic workflow (traces error code: 0) [2021-07-23 04:48:32] 2021-07-23 08:48:29,825 | INFO | root | wrap_up | traces error code: 0 [2021-07-23 04:48:32] 2021-07-23 08:48:29,834 | INFO | root | wrap_up | pilot has finished [2021-07-23 04:48:32] 2021-07-23 08:48:30,978 [wrapper] ==== pilot stdout END ==== [2021-07-23 04:48:32] 2021-07-23 08:48:31,080 [wrapper] ==== wrapper stdout RESUME ==== [2021-07-23 04:48:32] 2021-07-23 08:48:31,167 [wrapper] Pilot exit status: 0 [2021-07-23 04:48:32] 2021-07-23 08:48:31,477 [wrapper] pandaids: 5128602561 [2021-07-23 04:48:32] 2021-07-23 08:48:31,645 [wrapper] apfmon messages muted [2021-07-23 04:48:32] 2021-07-23 08:48:31,724 [wrapper] Test setup, not cleaning [2021-07-23 04:48:32] 2021-07-23 08:48:31,790 [wrapper] ==== wrapper stdout END ==== [2021-07-23 04:48:32] 2021-07-23 08:48:31,881 [wrapper] ==== wrapper stderr END ==== [2021-07-23 04:48:32] 2021-07-23 08:48:32,071 [wrapper] wrapperexiting ec=0, duration=3622 [2021-07-23 04:48:32] 2021-07-23 08:48:32,165 [wrapper] apfmon messages muted [2021-07-23 04:48:32] *** Error codes and diagnostics *** [2021-07-23 04:48:32] "exeErrorCode": 0, [2021-07-23 04:48:32] "exeErrorDiag": "", [2021-07-23 04:48:32] "pilotErrorCode": 0, [2021-07-23 04:48:32] "pilotErrorDiag": "", [2021-07-23 04:48:32] *** Listing of results directory *** [2021-07-23 04:48:33] total 44492 [2021-07-23 04:48:33] -rw-r--r-- 1 boinc boinc 340725 Jul 23 03:25 pilot2.tar.gz [2021-07-23 04:48:33] -rw-r--r-- 1 boinc boinc 3214 Jul 23 03:41 queuedata.json [2021-07-23 04:48:33] -rwx------ 1 boinc boinc 20589 Jul 23 03:43 runpilot2-wrapper.sh [2021-07-23 04:48:33] -rw-r--r-- 1 boinc boinc 107 Jul 23 03:48 wrapper_26015_x86_64-pc-linux-gnu [2021-07-23 04:48:33] -rwxr-xr-x 1 boinc boinc 6966 Jul 23 03:48 run_atlas [2021-07-23 04:48:33] -rw-r--r-- 1 boinc boinc 112 Jul 23 03:48 job.xml [2021-07-23 04:48:33] drwxrwx--x 2 boinc boinc 4096 Jul 23 03:48 shared [2021-07-23 04:48:33] -rw-r--r-- 1 boinc boinc 6188 Jul 23 03:48 init_data.xml [2021-07-23 04:48:33] -rw-r--r-- 1 boinc boinc 0 Jul 23 03:48 boinc_lockfile [2021-07-23 04:48:33] -rw-r--r-- 1 boinc boinc 37727106 Jul 23 03:48 EVNT.04972714._000037.pool.root.1 [2021-07-23 04:48:33] -rw-r--r-- 1 boinc boinc 350486 Jul 23 03:48 input.tar.gz [2021-07-23 04:48:33] -rw-r--r-- 1 boinc boinc 16583 Jul 23 03:48 start_atlas.sh [2021-07-23 04:48:33] -rw-r--r-- 1 boinc boinc 2613 Jul 23 03:48 pandaJob.out [2021-07-23 04:48:33] -rw------- 1 boinc boinc 1069000 Jul 23 03:49 agis_schedconf.cvmfs.json [2021-07-23 04:48:33] -rw------- 1 boinc boinc 1961522 Jul 23 03:49 cric_ddmendpoints.json [2021-07-23 04:48:33] drwx------ 4 boinc boinc 4096 Jul 23 03:49 pilot2 [2021-07-23 04:48:33] -rw------- 1 boinc boinc 1374658 Jul 23 04:46 output.1.06a14c7f-9e45-49ab-b2ea-34dccf0f08d8_30608.pool.root [2021-07-23 04:48:33] -rw------- 1 boinc boinc 1015 Jul 23 04:46 memory_monitor_summary.json [2021-07-23 04:48:33] -rw-r--r-- 1 boinc boinc 535 Jul 23 04:46 boinc_task_state.xml [2021-07-23 04:48:33] -rw------- 1 boinc boinc 191026 Jul 23 04:47 06a14c7f-9e45-49ab-b2ea-34dccf0f08d8_30608.1.job.log.tgz [2021-07-23 04:48:33] -rw------- 1 boinc boinc 6602 Jul 23 04:47 heartbeat.json [2021-07-23 04:48:33] -rw-r--r-- 1 boinc boinc 8192 Jul 23 04:48 boinc_mmap_file [2021-07-23 04:48:33] -rw-r--r-- 1 boinc boinc 26 Jul 23 04:48 wrapper_checkpoint.txt [2021-07-23 04:48:33] -rw------- 1 boinc boinc 7368 Jul 23 04:48 pilotlog.txt [2021-07-23 04:48:33] -rw------- 1 boinc boinc 377888 Jul 23 04:48 06a14c7f-9e45-49ab-b2ea-34dccf0f08d8_30608.1.job.log [2021-07-23 04:48:33] -rw------- 1 boinc boinc 536 Jul 23 04:48 output.list [2021-07-23 04:48:33] -rw-r--r-- 1 boinc boinc 748 Jul 23 04:48 runtime_log [2021-07-23 04:48:33] -rw------- 1 boinc boinc 1966080 Jul 23 04:48 result.tar.gz [2021-07-23 04:48:33] -rw-r--r-- 1 boinc boinc 9441 Jul 23 04:48 runtime_log.err [2021-07-23 04:48:33] -rw------- 1 boinc boinc 565 Jul 23 04:48 e0GNDmS14Qzn7Olcko1bjSoqABFKDmABFKDmumdXDmBHGKDmWfJ9Zm.diag [2021-07-23 04:48:33] -rw-r--r-- 1 boinc boinc 29681 Jul 23 04:48 stderr.txt [2021-07-23 04:48:33] HITS file was successfully produced: [2021-07-23 04:48:33] -rw------- 1 boinc boinc 1374658 Jul 23 04:46 shared/HITS.pool.root.1 [2021-07-23 04:48:33] *** Contents of shared directory: *** [2021-07-23 04:48:33] total 40472 [2021-07-23 04:48:33] -rw-r--r-- 1 boinc boinc 16583 Jul 23 03:48 start_atlas.sh [2021-07-23 04:48:33] -rw-r--r-- 1 boinc boinc 350486 Jul 23 03:48 input.tar.gz [2021-07-23 04:48:33] -rw-r--r-- 1 boinc boinc 37727106 Jul 23 03:48 ATLAS.root_0 [2021-07-23 04:48:33] -rw------- 1 boinc boinc 1374658 Jul 23 04:46 HITS.pool.root.1 [2021-07-23 04:48:33] -rw------- 1 boinc boinc 1966080 Jul 23 04:48 result.tar.gz 04:48:34 (66779): run_atlas exited; CPU time 1695.040775 04:48:34 (66779): called boinc_finish(0) </stderr_txt> ]]>
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