Name AbLKDma0JRzn7Olcko1bjSoqABFKDmABFKDmumdXDmHIGKDmiZCMtm_0
Workunit 2109625
Created 23 Jul 2021, 23:43:43 UTC
Sent 23 Jul 2021, 23:43:47 UTC
Report deadline 30 Jul 2021, 23:43:47 UTC
Received 24 Jul 2021, 0:33:21 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4357
Run time 49 min 0 sec
CPU time 15 min 24 sec
Validate state Valid
Credit 13.35
Device peak FLOPS 3.04 GFLOPS
Application version ATLAS Simulation v1.04 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 1.42 GB
Peak swap size 35.26 GB
Peak disk usage 79.07 MB

Stderr output

<core_client_version>7.9.3</core_client_version>
<![CDATA[
<stderr_txt>
19:44:03 (118674): wrapper (7.7.26015): starting
19:44:03 (118674): wrapper: running run_atlas (--nthreads 1)
[2021-07-23 19:44:03] Arguments: --nthreads 1
[2021-07-23 19:44:03] Threads: 1
[2021-07-23 19:44:03] Checking for CVMFS
[2021-07-23 19:44:04] Probing /cvmfs/atlas.cern.ch... OK
[2021-07-23 19:44:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2021-07-23 19:44:04] Running cvmfs_config stat atlas.cern.ch
[2021-07-23 19:44:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2021-07-23 19:44:05] 2.9.0.0 12719 105 47700 88910 2 72 3235852 4194305 27 130560 0 161405 99.135 158222 1896 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 0
[2021-07-23 19:44:05] CVMFS is ok
[2021-07-23 19:44:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2021-07-23 19:44:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2021-07-23 19:44:05] Small home clusters do not require a local http proxy but it is suggested if
[2021-07-23 19:44:05] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2021-07-23 19:44:05] Further information can be found at the LHC@home message board.
[2021-07-23 19:44:05] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2021-07-23 19:44:05] Checking for singularity binary...
[2021-07-23 19:44:05] Using singularity found in PATH at /usr/local/bin/singularity
[2021-07-23 19:44:05] Running /usr/local/bin/singularity --version
[2021-07-23 19:44:05] singularity version 3.7.2+10-ga969f0f8c
[2021-07-23 19:44:05] Checking singularity works with /usr/local/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2021-07-23 19:44:07] E5-2670
[2021-07-23 19:44:07] Singularity works
[2021-07-23 19:44:07] Starting ATLAS job with PandaID=5129332308
[2021-07-23 19:44:07] Running command: /usr/local/bin/singularity exec --pwd /var/lib/boinc-client/slots/28 -B /cvmfs,/var /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2021-07-23 20:33:01]  *** The last 200 lines of the pilot log: ***
[2021-07-23 20:33:01]   0     0    0     0    0     0      0      0 --:--:--  0:00:10 --:--:--     0
[2021-07-23 20:33:01]   0     0    0     0    0     0      0      0 --:--:--  0:00:11 --:--:--     0
[2021-07-23 20:33:01]   0     0    0     0    0     0      0      0 --:--:--  0:00:12 --:--:--     0
[2021-07-23 20:33:01]   0     0    0     0    0     0      0      0 --:--:--  0:00:13 --:--:--     0
[2021-07-23 20:33:01]   0     0    0     0    0     0      0      0 --:--:--  0:00:14 --:--:--     0
[2021-07-23 20:33:01]   0     0    0     0    0     0      0      0 --:--:--  0:00:15 --:--:--     0
[2021-07-23 20:33:01]   0     0    0     0    0     0      0      0 --:--:--  0:00:16 --:--:--     0
[2021-07-23 20:33:01]   0     0    0     0    0     0      0      0 --:--:--  0:00:17 --:--:--     0
[2021-07-23 20:33:01]   0     0    0     0    0     0      0      0 --:--:--  0:00:18 --:--:--     0
[2021-07-23 20:33:01]   0     0    0     0    0     0      0      0 --:--:--  0:00:19 --:--:--     0
[2021-07-23 20:33:01]   0     0    0     0    0     0      0      0 --:--:--  0:00:20 --:--:--     0
[2021-07-23 20:33:01] curl: (28) Connection timed out after 20004 milliseconds
[2021-07-23 20:33:01] 
[2021-07-23 20:33:01] 2021-07-24 00:32:43,392 | INFO     | pilot.control.job                | send_state                | pilot will not update the server (heartbeat message will be written to file)
[2021-07-23 20:33:01] 2021-07-24 00:32:43,392 | INFO     | pilot.control.job                | send_state                | job 5129332308 has finished - writing final server update
[2021-07-23 20:33:01] 2021-07-24 00:32:43,392 | DEBUG    | pilot.user.atlas.jobmetrics      | get_job_metrics_string    | job definition core count: 1
[2021-07-23 20:33:01] 2021-07-24 00:32:43,393 | INFO     | pilot.user.atlas.jobmetrics      | get_job_metrics_string    | will not add max space = -36458889 B to job metrics
[2021-07-23 20:33:01] 2021-07-24 00:32:43,394 | DEBUG    | pilot.api.analytics              | get_fitted_data           | removing tails from data to be fitted
[2021-07-23 20:33:01] 2021-07-24 00:32:43,394 | INFO     | pilot.api.analytics              | get_fitted_data           | fitting pss+swap vs Time
[2021-07-23 20:33:01] 2021-07-24 00:32:43,395 | INFO     | pilot.api.analytics              | get_fitted_data           | current memory leak: 374.69 B/s (using 38 data points, chi2=409272)
[2021-07-23 20:33:01] 2021-07-24 00:32:43,395 | DEBUG    | pilot.user.atlas.jobmetrics      | get_job_metrics           | job metrics="actualCoreCount=5 nEvents=2 dbTime=392.71 dbData=4274626 leak=374.69 chi2=409272 eventn
[2021-07-23 20:33:01] 2021-07-24 00:32:43,395 | INFO     | pilot.control.job                | get_data_structure        | mean actualcorecount: 4.684211
[2021-07-23 20:33:01] 2021-07-24 00:32:43,396 | INFO     | pilot.control.job                | get_data_structure        | total number of processed events: 2 (read)
[2021-07-23 20:33:01] 2021-07-24 00:32:43,418 | INFO     | pilot.util.container             | execute                   | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2021-07-23 20:33:01] 2021-07-24 00:32:43,481 | INFO     | pilot.user.atlas.utilities       | get_memory_values         | using path: /var/lib/boinc-client/slots/28/PanDA_Pilot-5129332308/memory_monitor_summary.json (trf n
[2021-07-23 20:33:01] 2021-07-24 00:32:43,483 | DEBUG    | pilot.user.atlas.utilities       | get_memory_monitor_info   | summary_dictionary={'Avg': {'nprocs': 5.044, 'nthreads': 6.0, 'pss': 1105626.0, 'rchar': 239554.0, '
[2021-07-23 20:33:01] 2021-07-24 00:32:43,483 | INFO     | pilot.user.atlas.utilities       | get_memory_monitor_info   | extracted standard info from prmon json
[2021-07-23 20:33:01] 2021-07-24 00:32:43,483 | INFO     | pilot.user.atlas.utilities       | get_memory_monitor_info   | extracted standard memory fields from prmon json
[2021-07-23 20:33:01] 2021-07-24 00:32:43,483 | INFO     | pilot.util.timing                | timing_report             | ..............................
[2021-07-23 20:33:01] 2021-07-24 00:32:43,484 | INFO     | pilot.util.timing                | timing_report             | . Timing measurements:
[2021-07-23 20:33:01] 2021-07-24 00:32:43,484 | INFO     | pilot.util.timing                | timing_report             | . get job = 0 s
[2021-07-23 20:33:01] 2021-07-24 00:32:43,484 | INFO     | pilot.util.timing                | timing_report             | . initial setup = 1 s
[2021-07-23 20:33:01] 2021-07-24 00:32:43,484 | INFO     | pilot.util.timing                | timing_report             | . payload setup = 58 s
[2021-07-23 20:33:01] 2021-07-24 00:32:43,484 | INFO     | pilot.util.timing                | timing_report             | . total setup = 59 s
[2021-07-23 20:33:01] 2021-07-24 00:32:43,484 | INFO     | pilot.util.timing                | timing_report             | . stage-in = 0 s
[2021-07-23 20:33:01] 2021-07-24 00:32:43,484 | INFO     | pilot.util.timing                | timing_report             | . payload execution = 2746 s
[2021-07-23 20:33:01] 2021-07-24 00:32:43,484 | INFO     | pilot.util.timing                | timing_report             | . stage-out = 1 s
[2021-07-23 20:33:01] 2021-07-24 00:32:43,484 | INFO     | pilot.util.timing                | timing_report             | ..............................
[2021-07-23 20:33:01] 2021-07-24 00:32:43,485 | DEBUG    | pilot.control.job                | send_state                | is_harvester_mode(args) : False
[2021-07-23 20:33:01] 2021-07-24 00:32:43,510 | DEBUG    | pilot.control.job                | write_heartbeat_to_file   | heartbeat dictionary: {'jobId': '5129332308', 'state': 'finished', 'timestamp': '2021-07-23T20:32:43
[2021-07-23 20:33:01] 2021-07-24 00:32:43,511 | DEBUG    | pilot.control.job                | write_heartbeat_to_file   | wrote heartbeat to file /var/lib/boinc-client/slots/28/heartbeat.json
[2021-07-23 20:33:01] 2021-07-24 00:32:43,511 | DEBUG    | pilot.control.job                | queue_monitor             | job 5129332308 was dequeued from the monitored payloads queue
[2021-07-23 20:33:01] 2021-07-24 00:32:43,675 | DEBUG    | pilot.control.job                | queue_monitor             | tmp job object deleted
[2021-07-23 20:33:01] 2021-07-24 00:32:43,676 | INFO     | pilot.control.job                | make_job_report           | 
[2021-07-23 20:33:01] 2021-07-24 00:32:43,676 | INFO     | pilot.control.job                | make_job_report           | job summary report
[2021-07-23 20:33:01] 2021-07-24 00:32:43,676 | INFO     | pilot.control.job                | make_job_report           | --------------------------------------------------
[2021-07-23 20:33:01] 2021-07-24 00:32:43,676 | INFO     | pilot.control.job                | make_job_report           | PanDA job id: 5129332308
[2021-07-23 20:33:01] 2021-07-24 00:32:43,676 | INFO     | pilot.control.job                | make_job_report           | task id: NULL
[2021-07-23 20:33:01] 2021-07-24 00:32:43,676 | INFO     | pilot.control.job                | make_job_report           | errors: (none)
[2021-07-23 20:33:01] 2021-07-24 00:32:43,677 | INFO     | pilot.control.job                | make_job_report           | status: LOG_TRANSFER = DONE 
[2021-07-23 20:33:01] 2021-07-24 00:32:43,677 | INFO     | pilot.control.job                | make_job_report           | pilot state: finished 
[2021-07-23 20:33:01] 2021-07-24 00:32:43,677 | INFO     | pilot.control.job                | make_job_report           | transexitcode: 0
[2021-07-23 20:33:01] 2021-07-24 00:32:43,677 | INFO     | pilot.control.job                | make_job_report           | exeerrorcode: 0
[2021-07-23 20:33:01] 2021-07-24 00:32:43,677 | INFO     | pilot.control.job                | make_job_report           | exeerrordiag: 
[2021-07-23 20:33:01] 2021-07-24 00:32:43,677 | INFO     | pilot.control.job                | make_job_report           | exitcode: 0
[2021-07-23 20:33:01] 2021-07-24 00:32:43,677 | INFO     | pilot.control.job                | make_job_report           | exitmsg: OK
[2021-07-23 20:33:01] 2021-07-24 00:32:43,677 | INFO     | pilot.control.job                | make_job_report           | cpuconsumptiontime: 977 s
[2021-07-23 20:33:01] 2021-07-24 00:32:43,678 | INFO     | pilot.control.job                | make_job_report           | nevents: 2
[2021-07-23 20:33:01] 2021-07-24 00:32:43,678 | INFO     | pilot.control.job                | make_job_report           | neventsw: 0
[2021-07-23 20:33:01] 2021-07-24 00:32:43,678 | INFO     | pilot.control.job                | make_job_report           | pid: 146911
[2021-07-23 20:33:01] 2021-07-24 00:32:43,678 | INFO     | pilot.control.job                | make_job_report           | pgrp: 146911
[2021-07-23 20:33:01] 2021-07-24 00:32:43,678 | INFO     | pilot.control.job                | make_job_report           | corecount: 1
[2021-07-23 20:33:01] 2021-07-24 00:32:43,678 | INFO     | pilot.control.job                | make_job_report           | event service: False
[2021-07-23 20:33:01] 2021-07-24 00:32:43,678 | INFO     | pilot.control.job                | make_job_report           | sizes: {24817023: 3855520, 24817024: 3855855, 24817025: 3855741, 24819833: 3877596, 24819835: 388712
[2021-07-23 20:33:01] 2021-07-24 00:32:43,679 | INFO     | pilot.control.job                | make_job_report           | --------------------------------------------------
[2021-07-23 20:33:01] 2021-07-24 00:32:43,679 | INFO     | pilot.control.job                | make_job_report           | 
[2021-07-23 20:33:01] 2021-07-24 00:32:43,679 | DEBUG    | pilot.control.job                | has_job_completed         | ls -lF /var/lib/boinc-client/slots/28:
[2021-07-23 20:33:01] 
[2021-07-23 20:33:01] 2021-07-24 00:32:43,679 | INFO     | pilot.util.container             | execute                   | executing command: ls -lF /var/lib/boinc-client/slots/28
[2021-07-23 20:33:01] 2021-07-24 00:32:43,737 | DEBUG    | pilot.control.job                | has_job_completed         | total 42364
[2021-07-23 20:33:01] -rw------- 1 boinc boinc   319363 Jul 23 20:32 0444a192-9aa9-4338-b93d-7b6653f35684_63561.1.job.log
[2021-07-23 20:33:01] -rw------- 1 boinc boinc   182815 Jul 23 20:32 0444a192-9aa9-4338-b93d-7b6653f35684_63561.1.job.log.tgz
[2021-07-23 20:33:01] -rw------- 1 boinc boinc      130 Jul 23 19:44 AbLKDma0JRzn7Olcko1bjSoqABFKDmABFKDmumdXDmHIGKDmiZCMtm.diag
[2021-07-23 20:33:01] -rw------- 1 boinc boinc  1068585 Jul 23 19:45 agis_schedconf.cvmfs.json
[2021-07-23 20:33:01] -rw-r--r-- 1 boinc boinc        0 Jul 23 19:44 boinc_lockfile
[2021-07-23 20:33:01] -rw-r--r-- 1 boinc boinc     8192 Jul 23 20:32 boinc_mmap_file
[2021-07-23 20:33:01] -rw-r--r-- 1 boinc boinc      534 Jul 23 20:32 boinc_task_state.xml
[2021-07-23 20:33:01] -rw------- 1 boinc boinc  1961526 Jul 23 19:45 cric_ddmendpoints.json
[2021-07-23 20:33:01] -rw-r--r-- 1 boinc boinc 37438704 Jul 23 19:44 EVNT.04972714._000033.pool.root.1
[2021-07-23 20:33:01] -rw------- 1 boinc boinc     6609 Jul 23 20:32 heartbeat.json
[2021-07-23 20:33:01] -rw-r--r-- 1 boinc boinc     6188 Jul 23 19:44 init_data.xml
[2021-07-23 20:33:01] -rw-r--r-- 1 boinc boinc   353579 Jul 23 19:44 input.tar.gz
[2021-07-23 20:33:01] -rw-r--r-- 1 boinc boinc      112 Jul 23 19:44 job.xml
[2021-07-23 20:33:01] -rw------- 1 boinc boinc     1014 Jul 23 20:32 memory_monitor_summary.json
[2021-07-23 20:33:01] -rw------- 1 boinc boinc  1251557 Jul 23 20:32 output.1.0444a192-9aa9-4338-b93d-7b6653f35684_63561.pool.root
[2021-07-23 20:33:01] -rw------- 1 boinc boinc      536 Jul 23 20:32 output.list
[2021-07-23 20:33:01] -rw-r--r-- 1 boinc boinc     2595 Jul 23 19:44 pandaJob.out
[2021-07-23 20:33:01] drwxrwx--- 2 boinc boinc     4096 Jul 23 20:32 PanDA_Pilot-5129332308/
[2021-07-23 20:33:01] drwx------ 4 boinc boinc     4096 Jul 23 19:45 pilot2/
[2021-07-23 20:33:01] -rw-r--r-- 1 boinc boinc   343623 Jul 23 11:13 pilot2.tar.gz
[2021-07-23 20:33:01] -rw------- 1 boinc boinc   300276 Jul 23 20:32 pilotlog.txt
[2021-07-23 20:33:01] -rw-r--r-- 1 boinc boinc     3214 Jul 23 19:40 queuedata.json
[2021-07-23 20:33:01] -rwxr-xr-x 1 boinc boinc     6966 Jul 23 19:44 run_atlas*
[2021-07-23 20:33:01] -rwx------ 1 boinc boinc    20589 Jul 23 19:43 runpilot2-wrapper.sh*
[2021-07-23 20:33:01] -rw-r--r-- 1 boinc boinc      407 Jul 23 19:44 runtime_log
[2021-07-23 20:33:01] -rw-r--r-- 1 boinc boinc     5579 Jul 23 19:44 runtime_log.err
[2021-07-23 20:33:01] drwxrwx--x 2 boinc boinc     4096 Jul 23 19:44 shared/
[2021-07-23 20:33:01] -rw-r--r-- 1 boinc boinc    16569 Jul 23 19:44 start_atlas.sh
[2021-07-23 20:33:01] -rw-r--r-- 1 boinc boinc     2211 Jul 23 19:44 stderr.txt
[2021-07-23 20:33:01] -rw-r--r-- 1 boinc boinc      107 Jul 23 19:44 wrapper_26015_x86_64-pc-linux-gnu
[2021-07-23 20:33:01] -rw-r--r-- 1 boinc boinc       25 Jul 23 20:32 wrapper_checkpoint.txt
[2021-07-23 20:33:01] 2021-07-24 00:32:43,737 | INFO     | pilot.util.queuehandling         | queue_report              | queue jobs has 0 job(s)
[2021-07-23 20:33:01] 2021-07-24 00:32:43,737 | INFO     | pilot.util.queuehandling         | queue_report              | queue payloads has 0 job(s)
[2021-07-23 20:33:01] 2021-07-24 00:32:43,738 | INFO     | pilot.util.queuehandling         | queue_report              | queue data_in has 0 job(s)
[2021-07-23 20:33:01] 2021-07-24 00:32:43,738 | INFO     | pilot.util.queuehandling         | queue_report              | queue data_out has 0 job(s)
[2021-07-23 20:33:01] 2021-07-24 00:32:43,738 | INFO     | pilot.util.queuehandling         | queue_report              | queue current_data_in has 0 job(s)
[2021-07-23 20:33:01] 2021-07-24 00:32:43,738 | INFO     | pilot.util.queuehandling         | queue_report              | queue validated_jobs has 0 job(s)
[2021-07-23 20:33:01] 2021-07-24 00:32:43,738 | INFO     | pilot.util.queuehandling         | queue_report              | queue validated_payloads has 0 job(s)
[2021-07-23 20:33:01] 2021-07-24 00:32:43,738 | INFO     | pilot.util.queuehandling         | queue_report              | queue monitored_payloads has 0 job(s)
[2021-07-23 20:33:01] 2021-07-24 00:32:43,738 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_jobs has 0 job(s)
[2021-07-23 20:33:01] 2021-07-24 00:32:43,739 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_payloads has 0 job(s)
[2021-07-23 20:33:01] 2021-07-24 00:32:43,739 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_data_in has 1 job(s)
[2021-07-23 20:33:01] 2021-07-24 00:32:43,739 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_data_out has 0 job(s)
[2021-07-23 20:33:01] 2021-07-24 00:32:43,739 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_jobs has 0 job(s)
[2021-07-23 20:33:01] 2021-07-24 00:32:43,739 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_payloads has 0 job(s)
[2021-07-23 20:33:01] 2021-07-24 00:32:43,739 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_data_in has 0 job(s)
[2021-07-23 20:33:01] 2021-07-24 00:32:43,739 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_data_out has 0 job(s)
[2021-07-23 20:33:01] 2021-07-24 00:32:43,740 | INFO     | pilot.util.queuehandling         | queue_report              | queue completed_jobs has 0 job(s)
[2021-07-23 20:33:01] 2021-07-24 00:32:43,740 | INFO     | pilot.util.queuehandling         | queue_report              | queue completed_jobids has 1 job(s)
[2021-07-23 20:33:01] 2021-07-24 00:32:43,740 | INFO     | pilot.control.job                | has_job_completed         | job 5129332308 has completed (purged errors)
[2021-07-23 20:33:01] 2021-07-24 00:32:43,740 | INFO     | pilot.util.processes             | cleanup                   | overall cleanup function is called
[2021-07-23 20:33:01] 2021-07-24 00:32:43,743 | DEBUG    | pilot.util.processes             | cleanup                   | work directory was removed: /var/lib/boinc-client/slots/28/PanDA_Pilot-5129332308
[2021-07-23 20:33:01] 2021-07-24 00:32:44,749 | INFO     | pilot.info.jobdata               | collect_zombies           | --- collectZombieJob: --- 10, [146911]
[2021-07-23 20:33:01] 2021-07-24 00:32:44,749 | INFO     | pilot.info.jobdata               | collect_zombies           | zombie collector trying to kill pid 146911
[2021-07-23 20:33:01] 2021-07-24 00:32:44,749 | INFO     | pilot.info.jobdata               | collect_zombies           | harmless exception when collecting zombies: [Errno 10] No child processes
[2021-07-23 20:33:01] 2021-07-24 00:32:45,754 | INFO     | pilot.util.processes             | cleanup                   | collected zombie processes
[2021-07-23 20:33:01] 2021-07-24 00:32:45,754 | INFO     | pilot.util.processes             | cleanup                   | will now attempt to kill all subprocesses of pid=146911
[2021-07-23 20:33:01] 2021-07-24 00:32:45,922 | INFO     | pilot.util.processes             | kill_processes            | process IDs to be killed: [146911] (in reverse order)
[2021-07-23 20:33:01] 2021-07-24 00:32:46,038 | WARNING  | pilot.util.processes             | kill_processes            | found no corresponding commands to process id(s)
[2021-07-23 20:33:01] 2021-07-24 00:32:46,038 | INFO     | pilot.util.processes             | kill_orphans              | Do not look for orphan processes in BOINC jobs
[2021-07-23 20:33:01] 2021-07-24 00:32:46,038 | DEBUG    | pilot.util.queuehandling         | purge_queue               | queue purged
[2021-07-23 20:33:01] 2021-07-24 00:32:46,039 | INFO     | pilot.control.job                | retrieve                  | ready for new job
[2021-07-23 20:33:01] 2021-07-24 00:32:46,039 | INFO     | root                             | retrieve                  | pilot has finished for previous job - re-establishing logging
[2021-07-23 20:33:01] 2021-07-24 00:32:46,040 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ****************************************
[2021-07-23 20:33:01] 2021-07-24 00:32:46,040 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ***  PanDA Pilot version 2.12.4 (5)  ***
[2021-07-23 20:33:01] 2021-07-24 00:32:46,040 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ****************************************
[2021-07-23 20:33:01] 2021-07-24 00:32:46,040 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | 
[2021-07-23 20:33:01] 2021-07-24 00:32:46,062 | INFO     | pilot.util.auxiliary             | display_architecture_info | architecture information:
[2021-07-23 20:33:01] 2021-07-24 00:32:46,608 | INFO     | pilot.util.auxiliary             | display_architecture_info | 
[2021-07-23 20:33:01] LSB Version:	:core-4.1-amd64:core-4.1-noarch
[2021-07-23 20:33:01] Distributor ID:	CentOS
[2021-07-23 20:33:01] Description:	CentOS Linux release 7.8.2003 (Core)
[2021-07-23 20:33:01] Release:	7.8.2003
[2021-07-23 20:33:01] Codename:	Core
[2021-07-23 20:33:01] 2021-07-24 00:32:46,608 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ****************************************
[2021-07-23 20:33:01] 2021-07-24 00:32:47,109 | DEBUG    | pilot.util.monitoring            | check_local_space         | checking local space on /var/lib/boinc-client/slots/28
[2021-07-23 20:33:01] 2021-07-24 00:32:47,157 | INFO     | pilot.util.monitoring            | check_local_space         | sufficient remaining disk space (31549554688 B)
[2021-07-23 20:33:01] 2021-07-24 00:32:47,157 | WARNING  | pilot.control.job                | proceed_with_getjob       | since timefloor is set to 0, pilot was only allowed to run one job
[2021-07-23 20:33:01] 2021-07-24 00:32:47,158 | DEBUG    | pilot.control.job                | retrieve                  | will not set job_aborted yet
[2021-07-23 20:33:01] 2021-07-24 00:32:47,158 | DEBUG    | pilot.control.job                | retrieve                  | [job] retrieve thread has finished
[2021-07-23 20:33:01] 2021-07-24 00:32:47,236 | WARNING  | pilot.util.common                | should_abort              | data:copytool_out:received graceful stop - abort after this iteration
[2021-07-23 20:33:01] 2021-07-24 00:32:47,282 | DEBUG    | pilot.control.job                | control                   | job control ending since graceful_stop has been set
[2021-07-23 20:33:01] 2021-07-24 00:32:47,283 | DEBUG    | pilot.control.job                | control                   | will not set job_aborted yet
[2021-07-23 20:33:01] 2021-07-24 00:32:47,283 | DEBUG    | pilot.control.job                | control                   | [job] control thread has finished
[2021-07-23 20:33:01] 2021-07-24 00:32:47,296 | DEBUG    | pilot.control.payload            | control                   | payload control ending since graceful_stop has been set
[2021-07-23 20:33:01] 2021-07-24 00:32:47,297 | DEBUG    | pilot.control.payload            | control                   | will not set job_aborted yet
[2021-07-23 20:33:01] 2021-07-24 00:32:47,297 | DEBUG    | pilot.control.payload            | control                   | [payload] control thread has finished
[2021-07-23 20:33:01] 2021-07-24 00:32:47,700 | DEBUG    | pilot.control.data               | control                   | data control ending since graceful_stop has been set
[2021-07-23 20:33:01] 2021-07-24 00:32:47,700 | DEBUG    | pilot.control.data               | control                   | will not set job_aborted yet
[2021-07-23 20:33:01] 2021-07-24 00:32:47,701 | DEBUG    | pilot.control.data               | control                   | [data] control thread has finished
[2021-07-23 20:33:01] 2021-07-24 00:32:47,758 | DEBUG    | pilot.control.job                | validate                  | will not set job_aborted yet
[2021-07-23 20:33:01] 2021-07-24 00:32:47,759 | DEBUG    | pilot.control.job                | validate                  | [job] validate thread has finished
[2021-07-23 20:33:01] 2021-07-24 00:32:47,807 | DEBUG    | pilot.control.payload            | execute_payloads          | will not set job_aborted yet
[2021-07-23 20:33:01] 2021-07-24 00:32:47,807 | INFO     | pilot.control.payload            | execute_payloads          | [payload] execute_payloads thread has finished
[2021-07-23 20:33:01] 2021-07-24 00:32:47,912 | DEBUG    | pilot.control.payload            | validate_pre              | will not set job_aborted yet
[2021-07-23 20:33:01] 2021-07-24 00:32:47,913 | INFO     | pilot.control.payload            | validate_pre              | [payload] validate_pre thread has finished
[2021-07-23 20:33:01] 2021-07-24 00:32:47,944 | DEBUG    | pilot.control.job                | create_data_payload       | will not set job_aborted yet
[2021-07-23 20:33:01] 2021-07-24 00:32:47,945 | DEBUG    | pilot.control.job                | create_data_payload       | [job] create_data_payload thread has finished
[2021-07-23 20:33:01] 2021-07-24 00:32:48,008 | INFO     | pilot.control.monitor            | control                   | [monitor] control thread has ended
[2021-07-23 20:33:01] 2021-07-24 00:32:48,236 | DEBUG    | pilot.control.data               | copytool_out              | will not set job_aborted yet
[2021-07-23 20:33:01] 2021-07-24 00:32:48,236 | DEBUG    | pilot.control.data               | copytool_out              | [data] copytool_out thread has finished
[2021-07-23 20:33:01] 2021-07-24 00:32:48,247 | DEBUG    | pilot.control.data               | copytool_in               | will not set job_aborted yet
[2021-07-23 20:33:01] 2021-07-24 00:32:48,247 | DEBUG    | pilot.control.data               | copytool_in               | [data] copytool_in thread has finished
[2021-07-23 20:33:01] 2021-07-24 00:32:48,292 | DEBUG    | pilot.control.payload            | validate_post             | will not set job_aborted yet
[2021-07-23 20:33:01] 2021-07-24 00:32:48,292 | INFO     | pilot.control.payload            | validate_post             | [payload] validate_post thread has finished
[2021-07-23 20:33:01] 2021-07-24 00:32:48,548 | DEBUG    | pilot.control.payload            | failed_post               | will not set job_aborted yet
[2021-07-23 20:33:01] 2021-07-24 00:32:48,548 | INFO     | pilot.control.payload            | failed_post               | [payload] failed_post thread has finished
[2021-07-23 20:33:01] 2021-07-24 00:32:48,684 | WARNING  | pilot.util.common                | should_abort              | job:queue_monitor:received graceful stop - abort after this iteration
[2021-07-23 20:33:01] 2021-07-24 00:32:48,684 | DEBUG    | pilot.control.job                | queue_monitor             | will not set job_aborted yet
[2021-07-23 20:33:01] 2021-07-24 00:32:48,685 | DEBUG    | pilot.control.job                | queue_monitor             | [job] queue monitor thread has finished
[2021-07-23 20:33:01] 2021-07-24 00:32:50,378 | WARNING  | pilot.util.common                | should_abort              | data:queue_monitoring:received graceful stop - abort after this iteration
[2021-07-23 20:33:01] 2021-07-24 00:32:53,378 | DEBUG    | pilot.control.data               | queue_monitoring          | will not set job_aborted yet
[2021-07-23 20:33:01] 2021-07-24 00:32:53,379 | DEBUG    | pilot.control.data               | queue_monitoring          | [data] queue_monitor thread has finished
[2021-07-23 20:33:01] 2021-07-24 00:32:59,252 | WARNING  | pilot.control.job                | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 74 s)
[2021-07-23 20:33:01] 2021-07-24 00:32:59,253 | DEBUG    | pilot.util.processes             | threads_aborted           | aborting since the last relevant thread is about to finish
[2021-07-23 20:33:01] 2021-07-24 00:32:59,253 | DEBUG    | pilot.control.job                | job_monitor               | will proceed to set job_aborted
[2021-07-23 20:33:01] 2021-07-24 00:32:59,253 | DEBUG    | pilot.control.job                | job_monitor               | [job] job monitor thread has finished
[2021-07-23 20:33:01] 2021-07-24 00:33:00,220 | INFO     | pilot.workflow.generic           | run                       | end of generic workflow (traces error code: 0)
[2021-07-23 20:33:01] 2021-07-24 00:33:00,221 | INFO     | root                             | wrap_up                   | traces error code: 0
[2021-07-23 20:33:01] 2021-07-24 00:33:00,221 | INFO     | root                             | wrap_up                   | pilot has finished
[2021-07-23 20:33:01] 2021-07-24 00:33:00,321 [wrapper] ==== pilot stdout END ====
[2021-07-23 20:33:01] 2021-07-24 00:33:00,346 [wrapper] ==== wrapper stdout RESUME ====
[2021-07-23 20:33:01] 2021-07-24 00:33:00,370 [wrapper] Pilot exit status: 0
[2021-07-23 20:33:01] 2021-07-24 00:33:00,506 [wrapper] pandaids: 5129332308
[2021-07-23 20:33:01] 2021-07-24 00:33:00,523 [wrapper] apfmon messages muted
[2021-07-23 20:33:01] 2021-07-24 00:33:00,531 [wrapper] Test setup, not cleaning
[2021-07-23 20:33:01] 2021-07-24 00:33:00,542 [wrapper] ==== wrapper stdout END ====
[2021-07-23 20:33:01] 2021-07-24 00:33:00,566 [wrapper] ==== wrapper stderr END ====
[2021-07-23 20:33:01] 2021-07-24 00:33:00,614 [wrapper] wrapperexiting ec=0, duration=2931
[2021-07-23 20:33:01] 2021-07-24 00:33:00,635 [wrapper] apfmon messages muted
[2021-07-23 20:33:01]  *** Error codes and diagnostics ***
[2021-07-23 20:33:01]     "exeErrorCode": 0,
[2021-07-23 20:33:01]     "exeErrorDiag": "",
[2021-07-23 20:33:01]     "pilotErrorCode": 0,
[2021-07-23 20:33:01]     "pilotErrorDiag": "",
[2021-07-23 20:33:01]  *** Listing of results directory ***
[2021-07-23 20:33:01] total 43868
[2021-07-23 20:33:01] -rw-r--r-- 1 boinc boinc   343623 Jul 23 11:13 pilot2.tar.gz
[2021-07-23 20:33:01] -rw-r--r-- 1 boinc boinc     3214 Jul 23 19:40 queuedata.json
[2021-07-23 20:33:01] -rwx------ 1 boinc boinc    20589 Jul 23 19:43 runpilot2-wrapper.sh
[2021-07-23 20:33:01] -rw-r--r-- 1 boinc boinc      107 Jul 23 19:44 wrapper_26015_x86_64-pc-linux-gnu
[2021-07-23 20:33:01] -rwxr-xr-x 1 boinc boinc     6966 Jul 23 19:44 run_atlas
[2021-07-23 20:33:01] -rw-r--r-- 1 boinc boinc      112 Jul 23 19:44 job.xml
[2021-07-23 20:33:01] drwxrwx--x 2 boinc boinc     4096 Jul 23 19:44 shared
[2021-07-23 20:33:01] -rw-r--r-- 1 boinc boinc     6188 Jul 23 19:44 init_data.xml
[2021-07-23 20:33:01] -rw-r--r-- 1 boinc boinc        0 Jul 23 19:44 boinc_lockfile
[2021-07-23 20:33:01] -rw-r--r-- 1 boinc boinc    16569 Jul 23 19:44 start_atlas.sh
[2021-07-23 20:33:01] -rw-r--r-- 1 boinc boinc   353579 Jul 23 19:44 input.tar.gz
[2021-07-23 20:33:01] -rw-r--r-- 1 boinc boinc 37438704 Jul 23 19:44 EVNT.04972714._000033.pool.root.1
[2021-07-23 20:33:01] -rw-r--r-- 1 boinc boinc     2595 Jul 23 19:44 pandaJob.out
[2021-07-23 20:33:01] -rw------- 1 boinc boinc  1068585 Jul 23 19:45 agis_schedconf.cvmfs.json
[2021-07-23 20:33:01] -rw------- 1 boinc boinc  1961526 Jul 23 19:45 cric_ddmendpoints.json
[2021-07-23 20:33:01] drwx------ 4 boinc boinc     4096 Jul 23 19:45 pilot2
[2021-07-23 20:33:01] -rw------- 1 boinc boinc  1251557 Jul 23 20:32 output.1.0444a192-9aa9-4338-b93d-7b6653f35684_63561.pool.root
[2021-07-23 20:33:01] -rw-r--r-- 1 boinc boinc      534 Jul 23 20:32 boinc_task_state.xml
[2021-07-23 20:33:01] -rw------- 1 boinc boinc     1014 Jul 23 20:32 memory_monitor_summary.json
[2021-07-23 20:33:01] -rw------- 1 boinc boinc   182815 Jul 23 20:32 0444a192-9aa9-4338-b93d-7b6653f35684_63561.1.job.log.tgz
[2021-07-23 20:33:01] -rw------- 1 boinc boinc     6609 Jul 23 20:32 heartbeat.json
[2021-07-23 20:33:01] -rw-r--r-- 1 boinc boinc     8192 Jul 23 20:32 boinc_mmap_file
[2021-07-23 20:33:01] -rw-r--r-- 1 boinc boinc       25 Jul 23 20:32 wrapper_checkpoint.txt
[2021-07-23 20:33:01] -rw------- 1 boinc boinc     7363 Jul 23 20:33 pilotlog.txt
[2021-07-23 20:33:01] -rw------- 1 boinc boinc   334038 Jul 23 20:33 0444a192-9aa9-4338-b93d-7b6653f35684_63561.1.job.log
[2021-07-23 20:33:01] -rw------- 1 boinc boinc      536 Jul 23 20:33 output.list
[2021-07-23 20:33:01] -rw-r--r-- 1 boinc boinc      748 Jul 23 20:33 runtime_log
[2021-07-23 20:33:01] -rw------- 1 boinc boinc  1792000 Jul 23 20:33 result.tar.gz
[2021-07-23 20:33:01] -rw-r--r-- 1 boinc boinc     9434 Jul 23 20:33 runtime_log.err
[2021-07-23 20:33:01] -rw------- 1 boinc boinc      562 Jul 23 20:33 AbLKDma0JRzn7Olcko1bjSoqABFKDmABFKDmumdXDmHIGKDmiZCMtm.diag
[2021-07-23 20:33:01] -rw-r--r-- 1 boinc boinc    30089 Jul 23 20:33 stderr.txt
[2021-07-23 20:33:01] HITS file was successfully produced:
[2021-07-23 20:33:01] -rw------- 1 boinc boinc 1251557 Jul 23 20:32 shared/HITS.pool.root.1
[2021-07-23 20:33:01]  *** Contents of shared directory: ***
[2021-07-23 20:33:01] total 39908
[2021-07-23 20:33:01] -rw-r--r-- 1 boinc boinc 37438704 Jul 23 19:44 ATLAS.root_0
[2021-07-23 20:33:01] -rw-r--r-- 1 boinc boinc    16569 Jul 23 19:44 start_atlas.sh
[2021-07-23 20:33:01] -rw-r--r-- 1 boinc boinc   353579 Jul 23 19:44 input.tar.gz
[2021-07-23 20:33:01] -rw------- 1 boinc boinc  1251557 Jul 23 20:32 HITS.pool.root.1
[2021-07-23 20:33:01] -rw------- 1 boinc boinc  1792000 Jul 23 20:33 result.tar.gz
20:33:02 (118674): run_atlas exited; CPU time 924.567067
20:33:02 (118674): called boinc_finish(0)

</stderr_txt>
]]>


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