Name | A7VMDmkVKRzn7Olcko1bjSoqABFKDmABFKDmumdXDmJIGKDmfcfqMm_0 |
Workunit | 2109639 |
Created | 24 Jul 2021, 0:15:59 UTC |
Sent | 24 Jul 2021, 0:16:33 UTC |
Report deadline | 31 Jul 2021, 0:16:33 UTC |
Received | 24 Jul 2021, 1:08:05 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 4357 |
Run time | 51 min 2 sec |
CPU time | 21 min 3 sec |
Validate state | Valid |
Credit | 13.90 |
Device peak FLOPS | 3.04 GFLOPS |
Application version | ATLAS Simulation v1.04 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.51 GB |
Peak swap size | 34.37 GB |
Peak disk usage | 80.44 MB |
<core_client_version>7.9.3</core_client_version> <![CDATA[ <stderr_txt> 20:16:50 (478): wrapper (7.7.26015): starting 20:16:50 (478): wrapper: running run_atlas (--nthreads 1) [2021-07-23 20:16:50] Arguments: --nthreads 1 [2021-07-23 20:16:50] Threads: 1 [2021-07-23 20:16:50] Checking for CVMFS [2021-07-23 20:16:51] Probing /cvmfs/atlas.cern.ch... OK [2021-07-23 20:16:51] Probing /cvmfs/atlas-condb.cern.ch... OK [2021-07-23 20:16:51] Running cvmfs_config stat atlas.cern.ch [2021-07-23 20:16:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2021-07-23 20:16:52] 2.9.0.0 12719 137 56424 88911 2 64 3238030 4194304 1325 130560 0 276303 99.502 158829 1889 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 0 [2021-07-23 20:16:52] CVMFS is ok [2021-07-23 20:16:52] Efficiency of ATLAS tasks can be improved by the following measure(s): [2021-07-23 20:16:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io. [2021-07-23 20:16:52] Small home clusters do not require a local http proxy but it is suggested if [2021-07-23 20:16:52] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks. [2021-07-23 20:16:52] Further information can be found at the LHC@home message board. [2021-07-23 20:16:52] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2021-07-23 20:16:52] Checking for singularity binary... [2021-07-23 20:16:52] Using singularity found in PATH at /usr/local/bin/singularity [2021-07-23 20:16:52] Running /usr/local/bin/singularity --version [2021-07-23 20:16:52] singularity version 3.7.2+10-ga969f0f8c [2021-07-23 20:16:52] Checking singularity works with /usr/local/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2021-07-23 20:16:52] E5-2670 [2021-07-23 20:16:52] Singularity works [2021-07-23 20:16:53] Starting ATLAS job with PandaID=5129368322 [2021-07-23 20:16:53] Running command: /usr/local/bin/singularity exec --pwd /var/lib/boinc-client/slots/19 -B /cvmfs,/var /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2021-07-23 21:07:50] *** The last 200 lines of the pilot log: *** [2021-07-23 21:07:50] "cpuEfficiency": 0.4336, [2021-07-23 21:07:50] "cpuPWEfficiency": 0.4336, [2021-07-23 21:07:50] "cpuTime": 6, [2021-07-23 21:07:50] "cpuTimeTotal": 1233, [2021-07-23 21:07:50] "externalCpuTime": 17, [2021-07-23 21:07:50] "processedEvents": 2, [2021-07-23 21:07:50] "trfPredata": null, [2021-07-23 21:07:50] "wallTime": 2818 [2021-07-23 21:07:50] } [2021-07-23 21:07:50] } [2021-07-23 21:07:50] } [2021-07-23 21:07:50] 2021-07-24 01:07:19,759 | DEBUG | pilot.user.atlas.common | update_server | no need to update logstash for this job [2021-07-23 21:07:50] 2021-07-24 01:07:19,759 | INFO | pilot.control.job | send_state | pilot will not update the server (heartbeat message will be written to file) [2021-07-23 21:07:50] 2021-07-24 01:07:19,759 | INFO | pilot.control.job | send_state | job 5129368322 has finished - writing final server update [2021-07-23 21:07:50] 2021-07-24 01:07:19,760 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics_string | job definition core count: 1 [2021-07-23 21:07:50] 2021-07-24 01:07:19,760 | INFO | pilot.user.atlas.jobmetrics | get_job_metrics_string | will not add max space = -36517706 B to job metrics [2021-07-23 21:07:50] 2021-07-24 01:07:19,761 | DEBUG | pilot.api.analytics | get_fitted_data | removing tails from data to be fitted [2021-07-23 21:07:50] 2021-07-24 01:07:19,762 | INFO | pilot.api.analytics | get_fitted_data | fitting pss+swap vs Time [2021-07-23 21:07:50] 2021-07-24 01:07:19,762 | INFO | pilot.api.analytics | get_fitted_data | current memory leak: 408.66 B/s (using 40 data points, chi2=346394) [2021-07-23 21:07:50] 2021-07-24 01:07:19,763 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics | job metrics="nEvents=2 dbTime=344.19 dbData=4274626 leak=408.66 chi2=346394 eventnumber=10002" [2021-07-23 21:07:50] 2021-07-24 01:07:19,763 | INFO | pilot.control.job | get_data_structure | mean actualcorecount: 3.450000 [2021-07-23 21:07:50] 2021-07-24 01:07:19,763 | INFO | pilot.control.job | get_data_structure | total number of processed events: 2 (read) [2021-07-23 21:07:50] 2021-07-24 01:07:19,782 | INFO | pilot.util.container | execute | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2021-07-23 21:07:50] 2021-07-24 01:07:19,877 | INFO | pilot.user.atlas.utilities | get_memory_values | using path: /var/lib/boinc-client/slots/19/PanDA_Pilot-5129368322/memory_monitor_summary.json (trf n [2021-07-23 21:07:50] 2021-07-24 01:07:19,878 | DEBUG | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'Avg': {'nprocs': 5.085, 'nthreads': 6.063, 'pss': 1208994.0, 'rchar': 232166.0, [2021-07-23 21:07:50] 2021-07-24 01:07:19,879 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard info from prmon json [2021-07-23 21:07:50] 2021-07-24 01:07:19,879 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard memory fields from prmon json [2021-07-23 21:07:50] 2021-07-24 01:07:19,879 | INFO | pilot.util.timing | timing_report | .............................. [2021-07-23 21:07:50] 2021-07-24 01:07:19,879 | INFO | pilot.util.timing | timing_report | . Timing measurements: [2021-07-23 21:07:50] 2021-07-24 01:07:19,879 | INFO | pilot.util.timing | timing_report | . get job = 0 s [2021-07-23 21:07:50] 2021-07-24 01:07:19,879 | INFO | pilot.util.timing | timing_report | . initial setup = 1 s [2021-07-23 21:07:50] 2021-07-24 01:07:19,879 | INFO | pilot.util.timing | timing_report | . payload setup = 45 s [2021-07-23 21:07:50] 2021-07-24 01:07:19,880 | INFO | pilot.util.timing | timing_report | . total setup = 46 s [2021-07-23 21:07:50] 2021-07-24 01:07:19,880 | INFO | pilot.util.timing | timing_report | . stage-in = 0 s [2021-07-23 21:07:50] 2021-07-24 01:07:19,880 | INFO | pilot.util.timing | timing_report | . payload execution = 2896 s [2021-07-23 21:07:50] 2021-07-24 01:07:19,880 | INFO | pilot.util.timing | timing_report | . stage-out = 1 s [2021-07-23 21:07:50] 2021-07-24 01:07:19,880 | INFO | pilot.util.timing | timing_report | .............................. [2021-07-23 21:07:50] 2021-07-24 01:07:19,880 | DEBUG | pilot.control.job | send_state | is_harvester_mode(args) : False [2021-07-23 21:07:50] 2021-07-24 01:07:19,881 | DEBUG | pilot.control.job | write_heartbeat_to_file | heartbeat dictionary: {'jobId': '5129368322', 'state': 'finished', 'timestamp': '2021-07-23T21:07:19 [2021-07-23 21:07:50] 2021-07-24 01:07:19,882 | DEBUG | pilot.control.job | write_heartbeat_to_file | wrote heartbeat to file /var/lib/boinc-client/slots/19/heartbeat.json [2021-07-23 21:07:50] 2021-07-24 01:07:19,882 | DEBUG | pilot.control.job | queue_monitor | job 5129368322 was dequeued from the monitored payloads queue [2021-07-23 21:07:50] 2021-07-24 01:07:20,062 | DEBUG | pilot.control.job | queue_monitor | tmp job object deleted [2021-07-23 21:07:50] 2021-07-24 01:07:20,062 | INFO | pilot.control.job | make_job_report | [2021-07-23 21:07:50] 2021-07-24 01:07:20,062 | INFO | pilot.control.job | make_job_report | job summary report [2021-07-23 21:07:50] 2021-07-24 01:07:20,063 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2021-07-23 21:07:50] 2021-07-24 01:07:20,063 | INFO | pilot.control.job | make_job_report | PanDA job id: 5129368322 [2021-07-23 21:07:50] 2021-07-24 01:07:20,063 | INFO | pilot.control.job | make_job_report | task id: NULL [2021-07-23 21:07:50] 2021-07-24 01:07:20,063 | INFO | pilot.control.job | make_job_report | errors: (none) [2021-07-23 21:07:50] 2021-07-24 01:07:20,063 | INFO | pilot.control.job | make_job_report | status: LOG_TRANSFER = DONE [2021-07-23 21:07:50] 2021-07-24 01:07:20,063 | INFO | pilot.control.job | make_job_report | pilot state: finished [2021-07-23 21:07:50] 2021-07-24 01:07:20,064 | INFO | pilot.control.job | make_job_report | transexitcode: 0 [2021-07-23 21:07:50] 2021-07-24 01:07:20,064 | INFO | pilot.control.job | make_job_report | exeerrorcode: 0 [2021-07-23 21:07:50] 2021-07-24 01:07:20,064 | INFO | pilot.control.job | make_job_report | exeerrordiag: [2021-07-23 21:07:50] 2021-07-24 01:07:20,064 | INFO | pilot.control.job | make_job_report | exitcode: 0 [2021-07-23 21:07:50] 2021-07-24 01:07:20,064 | INFO | pilot.control.job | make_job_report | exitmsg: OK [2021-07-23 21:07:50] 2021-07-24 01:07:20,064 | INFO | pilot.control.job | make_job_report | cpuconsumptiontime: 1319 s [2021-07-23 21:07:50] 2021-07-24 01:07:20,064 | INFO | pilot.control.job | make_job_report | nevents: 2 [2021-07-23 21:07:50] 2021-07-24 01:07:20,065 | INFO | pilot.control.job | make_job_report | neventsw: 0 [2021-07-23 21:07:50] 2021-07-24 01:07:20,065 | INFO | pilot.control.job | make_job_report | pid: 18196 [2021-07-23 21:07:50] 2021-07-24 01:07:20,065 | INFO | pilot.control.job | make_job_report | pgrp: 18196 [2021-07-23 21:07:50] 2021-07-24 01:07:20,065 | INFO | pilot.control.job | make_job_report | corecount: 1 [2021-07-23 21:07:50] 2021-07-24 01:07:20,065 | INFO | pilot.control.job | make_job_report | event service: False [2021-07-23 21:07:50] 2021-07-24 01:07:20,065 | INFO | pilot.control.job | make_job_report | sizes: {24818976: 3855525, 24818977: 3855691, 24818987: 3855633, 24821929: 3878667, 24821931: 388819 [2021-07-23 21:07:50] 2021-07-24 01:07:20,065 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2021-07-23 21:07:50] 2021-07-24 01:07:20,065 | INFO | pilot.control.job | make_job_report | [2021-07-23 21:07:50] 2021-07-24 01:07:20,066 | DEBUG | pilot.control.job | has_job_completed | ls -lF /var/lib/boinc-client/slots/19: [2021-07-23 21:07:50] [2021-07-23 21:07:50] 2021-07-24 01:07:20,066 | INFO | pilot.util.container | execute | executing command: ls -lF /var/lib/boinc-client/slots/19 [2021-07-23 21:07:50] 2021-07-24 01:07:20,125 | DEBUG | pilot.control.job | has_job_completed | total 43532 [2021-07-23 21:07:50] -rw------- 1 boinc boinc 340935 Jul 23 21:07 92ed4a2c-21a4-4add-8166-bc7e0038d549_37271.1.job.log [2021-07-23 21:07:50] -rw------- 1 boinc boinc 186232 Jul 23 21:07 92ed4a2c-21a4-4add-8166-bc7e0038d549_37271.1.job.log.tgz [2021-07-23 21:07:50] -rw------- 1 boinc boinc 130 Jul 23 20:16 A7VMDmkVKRzn7Olcko1bjSoqABFKDmABFKDmumdXDmJIGKDmfcfqMm.diag [2021-07-23 21:07:50] -rw------- 1 boinc boinc 1068585 Jul 23 20:18 agis_schedconf.cvmfs.json [2021-07-23 21:07:50] -rw-r--r-- 1 boinc boinc 0 Jul 23 20:16 boinc_lockfile [2021-07-23 21:07:50] -rw-r--r-- 1 boinc boinc 8192 Jul 23 21:07 boinc_mmap_file [2021-07-23 21:07:50] -rw-r--r-- 1 boinc boinc 535 Jul 23 21:06 boinc_task_state.xml [2021-07-23 21:07:50] -rw------- 1 boinc boinc 1961526 Jul 23 20:18 cric_ddmendpoints.json [2021-07-23 21:07:50] -rw-r--r-- 1 boinc boinc 37708683 Jul 23 20:16 EVNT.04972714._000031.pool.root.1 [2021-07-23 21:07:50] -rw------- 1 boinc boinc 7314 Jul 23 21:07 heartbeat.json [2021-07-23 21:07:50] -rw-r--r-- 1 boinc boinc 6188 Jul 23 20:16 init_data.xml [2021-07-23 21:07:50] -rw-r--r-- 1 boinc boinc 350489 Jul 23 20:16 input.tar.gz [2021-07-23 21:07:50] -rw-r--r-- 1 boinc boinc 112 Jul 23 20:16 job.xml [2021-07-23 21:07:50] -rw------- 1 boinc boinc 1017 Jul 23 21:06 memory_monitor_summary.json [2021-07-23 21:07:50] -rw------- 1 boinc boinc 2126783 Jul 23 21:06 output.1.92ed4a2c-21a4-4add-8166-bc7e0038d549_37271.pool.root [2021-07-23 21:07:50] -rw------- 1 boinc boinc 536 Jul 23 21:07 output.list [2021-07-23 21:07:50] -rw-r--r-- 1 boinc boinc 2613 Jul 23 20:16 pandaJob.out [2021-07-23 21:07:50] drwxrwx--- 2 boinc boinc 4096 Jul 23 21:07 PanDA_Pilot-5129368322/ [2021-07-23 21:07:50] drwx------ 4 boinc boinc 4096 Jul 23 20:18 pilot2/ [2021-07-23 21:07:50] -rw-r--r-- 1 boinc boinc 340725 Jul 23 19:34 pilot2.tar.gz [2021-07-23 21:07:50] -rw------- 1 boinc boinc 321672 Jul 23 21:07 pilotlog.txt [2021-07-23 21:07:50] -rw-r--r-- 1 boinc boinc 4534 Jul 23 20:15 queuedata.json [2021-07-23 21:07:50] -rwxr-xr-x 1 boinc boinc 6966 Jul 23 20:16 run_atlas* [2021-07-23 21:07:50] -rwx------ 1 boinc boinc 20589 Jul 23 20:15 runpilot2-wrapper.sh* [2021-07-23 21:07:50] -rw-r--r-- 1 boinc boinc 407 Jul 23 20:16 runtime_log [2021-07-23 21:07:50] -rw-r--r-- 1 boinc boinc 5586 Jul 23 20:16 runtime_log.err [2021-07-23 21:07:50] drwxrwx--x 2 boinc boinc 4096 Jul 23 20:16 shared/ [2021-07-23 21:07:50] -rw-r--r-- 1 boinc boinc 16583 Jul 23 20:16 start_atlas.sh [2021-07-23 21:07:50] -rw-r--r-- 1 boinc boinc 2207 Jul 23 20:16 stderr.txt [2021-07-23 21:07:50] -rw-r--r-- 1 boinc boinc 107 Jul 23 20:16 wrapper_26015_x86_64-pc-linux-gnu [2021-07-23 21:07:50] -rw-r--r-- 1 boinc boinc 26 Jul 23 21:07 wrapper_checkpoint.txt [2021-07-23 21:07:50] 2021-07-24 01:07:20,126 | INFO | pilot.util.queuehandling | queue_report | queue jobs has 0 job(s) [2021-07-23 21:07:50] 2021-07-24 01:07:20,126 | INFO | pilot.util.queuehandling | queue_report | queue payloads has 0 job(s) [2021-07-23 21:07:50] 2021-07-24 01:07:20,126 | INFO | pilot.util.queuehandling | queue_report | queue data_in has 0 job(s) [2021-07-23 21:07:50] 2021-07-24 01:07:20,126 | INFO | pilot.util.queuehandling | queue_report | queue data_out has 0 job(s) [2021-07-23 21:07:50] 2021-07-24 01:07:20,126 | INFO | pilot.util.queuehandling | queue_report | queue current_data_in has 0 job(s) [2021-07-23 21:07:50] 2021-07-24 01:07:20,126 | INFO | pilot.util.queuehandling | queue_report | queue validated_jobs has 0 job(s) [2021-07-23 21:07:50] 2021-07-24 01:07:20,127 | INFO | pilot.util.queuehandling | queue_report | queue validated_payloads has 0 job(s) [2021-07-23 21:07:50] 2021-07-24 01:07:20,127 | INFO | pilot.util.queuehandling | queue_report | queue monitored_payloads has 0 job(s) [2021-07-23 21:07:50] 2021-07-24 01:07:20,127 | INFO | pilot.util.queuehandling | queue_report | queue finished_jobs has 0 job(s) [2021-07-23 21:07:50] 2021-07-24 01:07:20,127 | INFO | pilot.util.queuehandling | queue_report | queue finished_payloads has 0 job(s) [2021-07-23 21:07:50] 2021-07-24 01:07:20,127 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_in has 1 job(s) [2021-07-23 21:07:50] 2021-07-24 01:07:20,127 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_out has 0 job(s) [2021-07-23 21:07:50] 2021-07-24 01:07:20,127 | INFO | pilot.util.queuehandling | queue_report | queue failed_jobs has 0 job(s) [2021-07-23 21:07:50] 2021-07-24 01:07:20,128 | INFO | pilot.util.queuehandling | queue_report | queue failed_payloads has 0 job(s) [2021-07-23 21:07:50] 2021-07-24 01:07:20,128 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_in has 0 job(s) [2021-07-23 21:07:50] 2021-07-24 01:07:20,128 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_out has 0 job(s) [2021-07-23 21:07:50] 2021-07-24 01:07:20,128 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobs has 0 job(s) [2021-07-23 21:07:50] 2021-07-24 01:07:20,128 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s) [2021-07-23 21:07:50] 2021-07-24 01:07:20,128 | INFO | pilot.control.job | has_job_completed | job 5129368322 has completed (purged errors) [2021-07-23 21:07:50] 2021-07-24 01:07:20,129 | INFO | pilot.util.processes | cleanup | overall cleanup function is called [2021-07-23 21:07:50] 2021-07-24 01:07:20,132 | DEBUG | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc-client/slots/19/PanDA_Pilot-5129368322 [2021-07-23 21:07:50] 2021-07-24 01:07:21,136 | INFO | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [18196] [2021-07-23 21:07:50] 2021-07-24 01:07:21,136 | INFO | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 18196 [2021-07-23 21:07:50] 2021-07-24 01:07:21,137 | INFO | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes [2021-07-23 21:07:50] 2021-07-24 01:07:22,141 | INFO | pilot.util.processes | cleanup | collected zombie processes [2021-07-23 21:07:50] 2021-07-24 01:07:22,142 | INFO | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=18196 [2021-07-23 21:07:50] 2021-07-24 01:07:22,312 | INFO | pilot.util.processes | kill_processes | process IDs to be killed: [18196] (in reverse order) [2021-07-23 21:07:50] 2021-07-24 01:07:22,423 | WARNING | pilot.util.processes | kill_processes | found no corresponding commands to process id(s) [2021-07-23 21:07:50] 2021-07-24 01:07:22,423 | INFO | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs [2021-07-23 21:07:50] 2021-07-24 01:07:22,424 | DEBUG | pilot.util.queuehandling | purge_queue | queue purged [2021-07-23 21:07:50] 2021-07-24 01:07:22,424 | INFO | pilot.control.job | retrieve | ready for new job [2021-07-23 21:07:50] 2021-07-24 01:07:22,424 | INFO | root | retrieve | pilot has finished for previous job - re-establishing logging [2021-07-23 21:07:50] 2021-07-24 01:07:22,425 | INFO | pilot.util.auxiliary | pilot_version_banner | ***************************************** [2021-07-23 21:07:50] 2021-07-24 01:07:22,425 | INFO | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 2.12.3 (13) *** [2021-07-23 21:07:50] 2021-07-24 01:07:22,426 | INFO | pilot.util.auxiliary | pilot_version_banner | ***************************************** [2021-07-23 21:07:50] 2021-07-24 01:07:22,426 | INFO | pilot.util.auxiliary | pilot_version_banner | [2021-07-23 21:07:50] 2021-07-24 01:07:22,446 | INFO | pilot.util.auxiliary | display_architecture_info | architecture information: [2021-07-23 21:07:50] 2021-07-24 01:07:22,900 | INFO | pilot.util.auxiliary | display_architecture_info | [2021-07-23 21:07:50] LSB Version: :core-4.1-amd64:core-4.1-noarch [2021-07-23 21:07:50] Distributor ID: CentOS [2021-07-23 21:07:50] Description: CentOS Linux release 7.8.2003 (Core) [2021-07-23 21:07:50] Release: 7.8.2003 [2021-07-23 21:07:50] Codename: Core [2021-07-23 21:07:50] 2021-07-24 01:07:22,900 | INFO | pilot.util.auxiliary | pilot_version_banner | ***************************************** [2021-07-23 21:07:50] 2021-07-24 01:07:23,403 | DEBUG | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc-client/slots/19 [2021-07-23 21:07:50] 2021-07-24 01:07:23,446 | INFO | pilot.util.monitoring | check_local_space | sufficient remaining disk space (30465327104 B) [2021-07-23 21:07:50] 2021-07-24 01:07:23,446 | WARNING | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job [2021-07-23 21:07:50] 2021-07-24 01:07:23,447 | DEBUG | pilot.control.job | retrieve | will not set job_aborted yet [2021-07-23 21:07:50] 2021-07-24 01:07:23,447 | WARNING | pilot.control.monitor | control | aborting monitor loop since graceful_stop has been set [2021-07-23 21:07:50] 2021-07-24 01:07:23,447 | WARNING | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration [2021-07-23 21:07:50] 2021-07-24 01:07:23,447 | DEBUG | pilot.control.job | retrieve | [job] retrieve thread has finished [2021-07-23 21:07:50] 2021-07-24 01:07:23,447 | INFO | pilot.control.monitor | control | [monitor] control thread has ended [2021-07-23 21:07:50] 2021-07-24 01:07:23,455 | DEBUG | pilot.control.payload | execute_payloads | will not set job_aborted yet [2021-07-23 21:07:50] 2021-07-24 01:07:23,456 | INFO | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished [2021-07-23 21:07:50] 2021-07-24 01:07:23,524 | DEBUG | pilot.control.payload | control | payload control ending since graceful_stop has been set [2021-07-23 21:07:50] 2021-07-24 01:07:23,525 | DEBUG | pilot.control.payload | control | will not set job_aborted yet [2021-07-23 21:07:50] 2021-07-24 01:07:23,525 | DEBUG | pilot.control.payload | control | [payload] control thread has finished [2021-07-23 21:07:50] 2021-07-24 01:07:23,652 | DEBUG | pilot.control.data | control | data control ending since graceful_stop has been set [2021-07-23 21:07:50] 2021-07-24 01:07:23,652 | DEBUG | pilot.control.data | control | will not set job_aborted yet [2021-07-23 21:07:50] 2021-07-24 01:07:23,653 | DEBUG | pilot.control.data | control | [data] control thread has finished [2021-07-23 21:07:50] 2021-07-24 01:07:23,684 | WARNING | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration [2021-07-23 21:07:50] 2021-07-24 01:07:24,092 | DEBUG | pilot.control.data | copytool_in | will not set job_aborted yet [2021-07-23 21:07:50] 2021-07-24 01:07:24,093 | DEBUG | pilot.control.data | copytool_in | [data] copytool_in thread has finished [2021-07-23 21:07:50] 2021-07-24 01:07:24,118 | DEBUG | pilot.control.payload | validate_post | will not set job_aborted yet [2021-07-23 21:07:50] 2021-07-24 01:07:24,119 | INFO | pilot.control.payload | validate_post | [payload] validate_post thread has finished [2021-07-23 21:07:50] 2021-07-24 01:07:24,345 | DEBUG | pilot.control.payload | failed_post | will not set job_aborted yet [2021-07-23 21:07:50] 2021-07-24 01:07:24,345 | INFO | pilot.control.payload | failed_post | [payload] failed_post thread has finished [2021-07-23 21:07:50] 2021-07-24 01:07:24,448 | DEBUG | pilot.control.data | copytool_out | will not set job_aborted yet [2021-07-23 21:07:50] 2021-07-24 01:07:24,448 | DEBUG | pilot.control.data | copytool_out | [data] copytool_out thread has finished [2021-07-23 21:07:50] 2021-07-24 01:07:24,472 | DEBUG | pilot.control.job | control | job control ending since graceful_stop has been set [2021-07-23 21:07:50] 2021-07-24 01:07:24,472 | DEBUG | pilot.control.job | control | will not set job_aborted yet [2021-07-23 21:07:50] 2021-07-24 01:07:24,473 | DEBUG | pilot.control.job | control | [job] control thread has finished [2021-07-23 21:07:50] 2021-07-24 01:07:24,703 | DEBUG | pilot.control.job | create_data_payload | will not set job_aborted yet [2021-07-23 21:07:50] 2021-07-24 01:07:24,704 | DEBUG | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished [2021-07-23 21:07:50] 2021-07-24 01:07:24,732 | DEBUG | pilot.control.job | validate | will not set job_aborted yet [2021-07-23 21:07:50] 2021-07-24 01:07:24,733 | DEBUG | pilot.control.job | validate | [job] validate thread has finished [2021-07-23 21:07:50] 2021-07-24 01:07:24,919 | DEBUG | pilot.control.payload | validate_pre | will not set job_aborted yet [2021-07-23 21:07:50] 2021-07-24 01:07:24,920 | INFO | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished [2021-07-23 21:07:50] 2021-07-24 01:07:25,068 | WARNING | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration [2021-07-23 21:07:50] 2021-07-24 01:07:25,069 | DEBUG | pilot.control.job | queue_monitor | will not set job_aborted yet [2021-07-23 21:07:50] 2021-07-24 01:07:25,069 | DEBUG | pilot.control.job | queue_monitor | [job] queue monitor thread has finished [2021-07-23 21:07:50] 2021-07-24 01:07:26,685 | DEBUG | pilot.control.data | queue_monitoring | will not set job_aborted yet [2021-07-23 21:07:50] 2021-07-24 01:07:26,685 | DEBUG | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished [2021-07-23 21:07:50] 2021-07-24 01:07:48,586 | WARNING | pilot.control.job | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 62 s) [2021-07-23 21:07:50] 2021-07-24 01:07:48,587 | DEBUG | pilot.util.processes | threads_aborted | aborting since the last relevant thread is about to finish [2021-07-23 21:07:50] 2021-07-24 01:07:48,587 | DEBUG | pilot.control.job | job_monitor | will proceed to set job_aborted [2021-07-23 21:07:50] 2021-07-24 01:07:48,587 | DEBUG | pilot.control.job | job_monitor | [job] job monitor thread has finished [2021-07-23 21:07:50] 2021-07-24 01:07:49,248 | INFO | pilot.workflow.generic | run | end of generic workflow (traces error code: 0) [2021-07-23 21:07:50] 2021-07-24 01:07:49,249 | INFO | root | wrap_up | traces error code: 0 [2021-07-23 21:07:50] 2021-07-24 01:07:49,249 | INFO | root | wrap_up | pilot has finished [2021-07-23 21:07:50] 2021-07-24 01:07:49,419 [wrapper] ==== pilot stdout END ==== [2021-07-23 21:07:50] 2021-07-24 01:07:49,446 [wrapper] ==== wrapper stdout RESUME ==== [2021-07-23 21:07:50] 2021-07-24 01:07:49,474 [wrapper] Pilot exit status: 0 [2021-07-23 21:07:50] 2021-07-24 01:07:49,647 [wrapper] pandaids: 5129368322 [2021-07-23 21:07:50] 2021-07-24 01:07:49,694 [wrapper] apfmon messages muted [2021-07-23 21:07:50] 2021-07-24 01:07:49,719 [wrapper] Test setup, not cleaning [2021-07-23 21:07:50] 2021-07-24 01:07:49,748 [wrapper] ==== wrapper stdout END ==== [2021-07-23 21:07:50] 2021-07-24 01:07:49,771 [wrapper] ==== wrapper stderr END ==== [2021-07-23 21:07:50] 2021-07-24 01:07:49,830 [wrapper] wrapperexiting ec=0, duration=3055 [2021-07-23 21:07:50] 2021-07-24 01:07:49,854 [wrapper] apfmon messages muted [2021-07-23 21:07:50] *** Error codes and diagnostics *** [2021-07-23 21:07:50] "exeErrorCode": 0, [2021-07-23 21:07:50] "exeErrorDiag": "", [2021-07-23 21:07:50] "pilotErrorCode": 0, [2021-07-23 21:07:50] "pilotErrorDiag": "", [2021-07-23 21:07:50] *** Listing of results directory *** [2021-07-23 21:07:50] total 45892 [2021-07-23 21:07:50] -rw-r--r-- 1 boinc boinc 340725 Jul 23 19:34 pilot2.tar.gz [2021-07-23 21:07:50] -rwx------ 1 boinc boinc 20589 Jul 23 20:15 runpilot2-wrapper.sh [2021-07-23 21:07:50] -rw-r--r-- 1 boinc boinc 4534 Jul 23 20:15 queuedata.json [2021-07-23 21:07:50] -rw-r--r-- 1 boinc boinc 107 Jul 23 20:16 wrapper_26015_x86_64-pc-linux-gnu [2021-07-23 21:07:50] -rwxr-xr-x 1 boinc boinc 6966 Jul 23 20:16 run_atlas [2021-07-23 21:07:50] -rw-r--r-- 1 boinc boinc 112 Jul 23 20:16 job.xml [2021-07-23 21:07:50] drwxrwx--x 2 boinc boinc 4096 Jul 23 20:16 shared [2021-07-23 21:07:50] -rw-r--r-- 1 boinc boinc 6188 Jul 23 20:16 init_data.xml [2021-07-23 21:07:50] -rw-r--r-- 1 boinc boinc 0 Jul 23 20:16 boinc_lockfile [2021-07-23 21:07:50] -rw-r--r-- 1 boinc boinc 350489 Jul 23 20:16 input.tar.gz [2021-07-23 21:07:50] -rw-r--r-- 1 boinc boinc 37708683 Jul 23 20:16 EVNT.04972714._000031.pool.root.1 [2021-07-23 21:07:50] -rw-r--r-- 1 boinc boinc 16583 Jul 23 20:16 start_atlas.sh [2021-07-23 21:07:50] -rw-r--r-- 1 boinc boinc 2613 Jul 23 20:16 pandaJob.out [2021-07-23 21:07:50] -rw------- 1 boinc boinc 1068585 Jul 23 20:18 agis_schedconf.cvmfs.json [2021-07-23 21:07:50] -rw------- 1 boinc boinc 1961526 Jul 23 20:18 cric_ddmendpoints.json [2021-07-23 21:07:50] drwx------ 4 boinc boinc 4096 Jul 23 20:18 pilot2 [2021-07-23 21:07:50] -rw-r--r-- 1 boinc boinc 535 Jul 23 21:06 boinc_task_state.xml [2021-07-23 21:07:50] -rw------- 1 boinc boinc 2126783 Jul 23 21:06 output.1.92ed4a2c-21a4-4add-8166-bc7e0038d549_37271.pool.root [2021-07-23 21:07:50] -rw------- 1 boinc boinc 1017 Jul 23 21:06 memory_monitor_summary.json [2021-07-23 21:07:50] -rw------- 1 boinc boinc 186232 Jul 23 21:07 92ed4a2c-21a4-4add-8166-bc7e0038d549_37271.1.job.log.tgz [2021-07-23 21:07:50] -rw------- 1 boinc boinc 7314 Jul 23 21:07 heartbeat.json [2021-07-23 21:07:50] -rw-r--r-- 1 boinc boinc 8192 Jul 23 21:07 boinc_mmap_file [2021-07-23 21:07:50] -rw-r--r-- 1 boinc boinc 26 Jul 23 21:07 wrapper_checkpoint.txt [2021-07-23 21:07:50] -rw------- 1 boinc boinc 7522 Jul 23 21:07 pilotlog.txt [2021-07-23 21:07:50] -rw------- 1 boinc boinc 355765 Jul 23 21:07 92ed4a2c-21a4-4add-8166-bc7e0038d549_37271.1.job.log [2021-07-23 21:07:50] -rw------- 1 boinc boinc 536 Jul 23 21:07 output.list [2021-07-23 21:07:50] -rw-r--r-- 1 boinc boinc 748 Jul 23 21:07 runtime_log [2021-07-23 21:07:50] -rw------- 1 boinc boinc 2693120 Jul 23 21:07 result.tar.gz [2021-07-23 21:07:50] -rw-r--r-- 1 boinc boinc 9441 Jul 23 21:07 runtime_log.err [2021-07-23 21:07:50] -rw------- 1 boinc boinc 563 Jul 23 21:07 A7VMDmkVKRzn7Olcko1bjSoqABFKDmABFKDmumdXDmJIGKDmfcfqMm.diag [2021-07-23 21:07:50] -rw-r--r-- 1 boinc boinc 29683 Jul 23 21:07 stderr.txt [2021-07-23 21:07:50] HITS file was successfully produced: [2021-07-23 21:07:50] -rw------- 1 boinc boinc 2126783 Jul 23 21:06 shared/HITS.pool.root.1 [2021-07-23 21:07:50] *** Contents of shared directory: *** [2021-07-23 21:07:50] total 41904 [2021-07-23 21:07:50] -rw-r--r-- 1 boinc boinc 37708683 Jul 23 20:16 ATLAS.root_0 [2021-07-23 21:07:50] -rw-r--r-- 1 boinc boinc 16583 Jul 23 20:16 start_atlas.sh [2021-07-23 21:07:50] -rw-r--r-- 1 boinc boinc 350489 Jul 23 20:16 input.tar.gz [2021-07-23 21:07:50] -rw------- 1 boinc boinc 2126783 Jul 23 21:06 HITS.pool.root.1 [2021-07-23 21:07:50] -rw------- 1 boinc boinc 2693120 Jul 23 21:07 result.tar.gz 21:07:51 (478): run_atlas exited; CPU time 1263.851601 21:07:51 (478): called boinc_finish(0) </stderr_txt> ]]>
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